reading go_comp.txt no taxon filter - annotation will be loaded for all taxa feature not found, no synonym matches a feature (SPBC354.11C SPBC354.11C) counts: count | value -------+------------------------------------------------------------------------ 1 | Inferred from Genomic Context 1 | Inferred from Key Residues 1 | Inferred from Experiment 2 | sodium dodecyl sulfate polyacrylamide gel electrophoresis evidence 5 | inferred from Reviewed Computational Analysis 6 | immunofluorescence evidence 10 | fusion protein localization evidence 10 | transcript expression level evidence 23 | RNA protection assay evidence 43 | Cell growth assay 51 | reverse transcription polymerase chain reaction transcription evidence 76 | Inferred from Expression Pattern 77 | quantitative PCR 143 | reporter gene assay evidence 212 | experimental evidence 239 | competitive growth assay evidence 359 | Western blot evidence 624 | Traceable Author Statement 630 | Inferred from Genetic Interaction 759 | Northern assay evidence 924 | Inferred from Physical Interaction 1384 | expression microarray evidence 1702 | Inferred from Mutant Phenotype 1752 | Inferred from Sequence Model 1803 | Inferred by Curator 2302 | Inferred from Sequence or Structural Similarity 2321 | Non-traceable Author Statement 2813 | Inferred from Direct Assay 5350 | Microscopy 6661 | Inferred from Sequence Orthology (30 rows) reading go_proc.txt no taxon filter - annotation will be loaded for all taxa counts: count | value -------+------------------------------------------------------------------------ 1 | Inferred from Genomic Context 1 | Inferred from Key Residues 1 | Inferred from Experiment 2 | sodium dodecyl sulfate polyacrylamide gel electrophoresis evidence 5 | inferred from Reviewed Computational Analysis 6 | immunofluorescence evidence 10 | fusion protein localization evidence 10 | transcript expression level evidence 23 | RNA protection assay evidence 43 | Cell growth assay 51 | reverse transcription polymerase chain reaction transcription evidence 76 | Inferred from Expression Pattern 77 | quantitative PCR 143 | reporter gene assay evidence 212 | experimental evidence 239 | competitive growth assay evidence 359 | Western blot evidence 624 | Traceable Author Statement 630 | Inferred from Genetic Interaction 759 | Northern assay evidence 924 | Inferred from Physical Interaction 1384 | expression microarray evidence 1702 | Inferred from Mutant Phenotype 1752 | Inferred from Sequence Model 1803 | Inferred by Curator 2302 | Inferred from Sequence or Structural Similarity 2813 | Inferred from Direct Assay 4411 | Non-traceable Author Statement 5350 | Microscopy 6661 | Inferred from Sequence Orthology (30 rows) reading go_func.txt no taxon filter - annotation will be loaded for all taxa counts: count | value -------+------------------------------------------------------------------------ 1 | Inferred from Genomic Context 1 | Inferred from Key Residues 1 | Inferred from Experiment 2 | sodium dodecyl sulfate polyacrylamide gel electrophoresis evidence 5 | inferred from Reviewed Computational Analysis 6 | immunofluorescence evidence 10 | fusion protein localization evidence 10 | transcript expression level evidence 23 | RNA protection assay evidence 43 | Cell growth assay 51 | reverse transcription polymerase chain reaction transcription evidence 76 | Inferred from Expression Pattern 77 | quantitative PCR 143 | reporter gene assay evidence 212 | experimental evidence 239 | competitive growth assay evidence 359 | Western blot evidence 624 | Traceable Author Statement 630 | Inferred from Genetic Interaction 759 | Northern assay evidence 924 | Inferred from Physical Interaction 1384 | expression microarray evidence 1702 | Inferred from Mutant Phenotype 1752 | Inferred from Sequence Model 1803 | Inferred by Curator 2302 | Inferred from Sequence or Structural Similarity 2813 | Inferred from Direct Assay 4759 | Non-traceable Author Statement 5350 | Microscopy 6661 | Inferred from Sequence Orthology (30 rows) reading From_curation_tool no taxon filter - annotation will be loaded for all taxa counts: count | value -------+------------------------------------------------------------------------ 1 | Inferred from Genomic Context 1 | Inferred from Key Residues 1 | Inferred from Experiment 2 | sodium dodecyl sulfate polyacrylamide gel electrophoresis evidence 5 | inferred from Reviewed Computational Analysis 6 | immunofluorescence evidence 10 | fusion protein localization evidence 10 | transcript expression level evidence 23 | RNA protection assay evidence 43 | Cell growth assay 51 | reverse transcription polymerase chain reaction transcription evidence 76 | Inferred from Expression Pattern 77 | quantitative PCR 143 | reporter gene assay evidence 212 | experimental evidence 239 | competitive growth assay evidence 359 | Western blot evidence 624 | Traceable Author Statement 634 | Inferred from Genetic Interaction 759 | Northern assay evidence 934 | Inferred from Physical Interaction 1384 | expression microarray evidence 1716 | Inferred from Mutant Phenotype 1752 | Inferred from Sequence Model 1803 | Inferred by Curator 2302 | Inferred from Sequence or Structural Similarity 2856 | Inferred from Direct Assay 4759 | Non-traceable Author Statement 5350 | Microscopy 6661 | Inferred from Sequence Orthology (30 rows) reading GO_ORFeome_localizations2.txt no taxon filter - annotation will be loaded for all taxa feature not found, no synonym matches a feature (SPAC1556.06.1 SPAC1556.06.1) feature not found, no synonym matches a feature (SPAC1556.06.2 SPAC1556.06.2) feature not found, no synonym matches a feature (SPAC823.02 SPAC823.02) feature not found, no synonym matches a feature (SPCC417.04 SPCC417.04) feature not found, no synonym matches a feature (SPCC417.04 SPCC417.04) feature not found, no synonym matches a feature (SPCC622.05 SPCC622.05) feature not found, no synonym matches a feature (mat1-Pc mat1-Pc) feature not found, no synonym matches a feature (mat1-Pc mat1-Pc) feature not found, no synonym matches a feature (mat1-Pi mat1-Pi) counts: count | value -------+------------------------------------------------------------------------ 1 | Inferred from Genomic Context 1 | Inferred from Key Residues 1 | Inferred from Experiment 2 | sodium dodecyl sulfate polyacrylamide gel electrophoresis evidence 5 | inferred from Reviewed Computational Analysis 6 | immunofluorescence evidence 10 | fusion protein localization evidence 10 | transcript expression level evidence 23 | RNA protection assay evidence 43 | Cell growth assay 51 | reverse transcription polymerase chain reaction transcription evidence 76 | Inferred from Expression Pattern 77 | quantitative PCR 143 | reporter gene assay evidence 212 | experimental evidence 239 | competitive growth assay evidence 359 | Western blot evidence 624 | Traceable Author Statement 634 | Inferred from Genetic Interaction 759 | Northern assay evidence 934 | Inferred from Physical Interaction 1384 | expression microarray evidence 1716 | Inferred from Mutant Phenotype 1752 | Inferred from Sequence Model 1803 | Inferred by Curator 2302 | Inferred from Sequence or Structural Similarity 4759 | Non-traceable Author Statement 5350 | Microscopy 6661 | Inferred from Sequence Orthology 9870 | Inferred from Direct Assay (30 rows) /var/pomcur/sources/gene_association.pombase.inf.gaf no taxon filter - annotation will be loaded for all taxa counts after inf: count | value -------+------------------------------------------------------------------------ 1 | Inferred from Genomic Context 1 | Inferred from Key Residues 2 | sodium dodecyl sulfate polyacrylamide gel electrophoresis evidence 4 | Inferred from Experiment 5 | inferred from Reviewed Computational Analysis 6 | immunofluorescence evidence 10 | fusion protein localization evidence 10 | transcript expression level evidence 23 | RNA protection assay evidence 43 | Cell growth assay 51 | reverse transcription polymerase chain reaction transcription evidence 76 | Inferred from Expression Pattern 77 | quantitative PCR 143 | reporter gene assay evidence 212 | experimental evidence 239 | competitive growth assay evidence 359 | Western blot evidence 624 | Traceable Author Statement 637 | Inferred from Genetic Interaction 759 | Northern assay evidence 935 | Inferred from Physical Interaction 1384 | expression microarray evidence 1752 | Inferred from Sequence Model 1777 | Inferred from Mutant Phenotype 1805 | Inferred by Curator 2305 | Inferred from Sequence or Structural Similarity 4759 | Non-traceable Author Statement 5350 | Microscopy 6661 | Inferred from Sequence Orthology 9908 | Inferred from Direct Assay (30 rows) /var/pomcur/sources/gene_association.goa_uniprot.pombe didn't download new ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/goa_uniprot_all.gaf.gz feature not found, no synonym matches a feature (A8DNH7_SCHPM A8DNH7 A8DNH7) feature not found, no synonym matches a feature (A8DNH7_SCHPM A8DNH7 A8DNH7) feature not found, no synonym matches a feature (A8DNH7_SCHPM A8DNH7 A8DNH7) feature not found, no synonym matches a feature (A8DNH7_SCHPM A8DNH7 A8DNH7) feature not found, no synonym matches a feature (A9QAE1_SCHPM A9QAE1 A9QAE1) feature not found, no synonym matches a feature (A9QAE1_SCHPM A9QAE1 A9QAE1) feature not found, no synonym matches a feature (A9QAE1_SCHPM A9QAE1 A9QAE1) feature not found, no synonym matches a feature (A9QGZ7_SCHPM A9QGZ7 A9QGZ7) feature not found, no synonym matches a feature (A9QGZ7_SCHPM A9QGZ7 A9QGZ7) feature not found, no synonym matches a feature (A9QGZ7_SCHPM A9QGZ7 A9QGZ7) feature not found, no synonym matches a feature (A9QGZ7_SCHPM A9QGZ7 A9QGZ7) feature not found, no synonym matches a feature (YK35_SCHPO SPAC110.05 G2TRK5 SPAC110.05) feature not found, no synonym matches a feature (YG8H_SCHPO SPBC32F12.17 G2TRR2 SPBC32F12.17) feature not found, no synonym matches a feature (YN4D_SCHPO SPBC36.13 G2TRS4 SPBC36.13) feature not found, no synonym matches a feature (YN5D_SCHPO SPBC713.13 G2TRS5 SPBC713.13) feature not found, no synonym matches a feature (YI4D_SCHPO SPBC1348.13 G2TRS8 SPBC1348.13) feature not found, no synonym matches a feature (YCTG_SCHPO SPCC794.16 G2TRT9 SPCC794.16) feature not found, no synonym matches a feature (YC4E_SCHPO SPCC1672.14 G2TRU2 SPCC1672.14) feature not found, no synonym matches a feature (G9JY47_SCHPM RPB1 G9JY47 RPB1) feature not found, no synonym matches a feature (G9JY47_SCHPM RPB1 G9JY47 RPB1) feature not found, no synonym matches a feature (G9JY47_SCHPM RPB1 G9JY47 RPB1) feature not found, no synonym matches a feature (I7A0C5_SCHPM I7A0C5 I7A0C5) feature not found, no synonym matches a feature (I7A0C5_SCHPM I7A0C5 I7A0C5) feature not found, no synonym matches a feature (I7A0C5_SCHPM I7A0C5 I7A0C5) feature not found, no synonym matches a feature (I7A0C5_SCHPM I7A0C5 I7A0C5) feature not found, no synonym matches a feature (I7A0C5_SCHPM I7A0C5 I7A0C5) feature not found, no synonym matches a feature (O14373_SCHPM O14373 O14373) feature not found, no synonym matches a feature (O14374_SCHPM O14374 O14374) feature not found, no synonym matches a feature (O14376_SCHPM O14376 O14376) feature not found, no synonym matches a feature (O14376_SCHPM O14376 O14376) feature not found, no synonym matches a feature (O14376_SCHPM O14376 O14376) feature not found, no synonym matches a feature (O14377_SCHPM O14377 O14377) feature not found, no synonym matches a feature (O14377_SCHPM O14377 O14377) feature not found, no synonym matches a feature (O14383_SCHPM O14383 O14383) feature not found, no synonym matches a feature (O14387_SCHPM O14387 O14387) feature not found, no synonym matches a feature (O14389_SCHPM O14389 O14389) feature not found, no synonym matches a feature (O14389_SCHPM O14389 O14389) feature not found, no synonym matches a feature (O14389_SCHPM O14389 O14389) feature not found, no synonym matches a feature (O14391_SCHPM O14391 O14391) feature not found, no synonym matches a feature (O14391_SCHPM O14391 O14391) feature not found, no synonym matches a feature (O14391_SCHPM O14391 O14391) feature not found, no synonym matches a feature (O14396_SCHPM O14396 O14396) feature not found, no synonym matches a feature (O14396_SCHPM O14396 O14396) feature not found, no synonym matches a feature (O14398_SCHPM O14398 O14398) feature not found, no synonym matches a feature (O14461_SCHPM O14461 O14461) feature not found, no synonym matches a feature (O14461_SCHPM O14461 O14461) feature not found, no synonym matches a feature (O14461_SCHPM O14461 O14461) feature not found, no synonym matches a feature (YGVB_SCHPO SPBC354.11c O43025 SPBC354.11c) feature not found, no synonym matches a feature (O74177_SCHPM O74177 O74177) feature not found, no synonym matches a feature (YC85_SCHPO SPCC622.05 O94595 SPCC622.05) feature not found, no synonym matches a feature (P78865_SCHPM P78865 P78865) feature not found, no synonym matches a feature (P78865_SCHPM P78865 P78865) feature not found, no synonym matches a feature (Q01910_SCHPM retrotransposon Tf1-107 Q01910 retrotransposon Tf1-107) feature not found, no synonym matches a feature (Q01910_SCHPM retrotransposon Tf1-107 Q01910 retrotransposon Tf1-107) feature not found, no synonym matches a feature (Q01910_SCHPM retrotransposon Tf1-107 Q01910 retrotransposon Tf1-107) feature not found, no synonym matches a feature (Q01910_SCHPM retrotransposon Tf1-107 Q01910 retrotransposon Tf1-107) feature not found, no synonym matches a feature (Q06Y82_SCHPM COXII Q06Y82 COXII) feature not found, no synonym matches a feature (Q06Y82_SCHPM COXII Q06Y82 COXII) feature not found, no synonym matches a feature (Q06Y82_SCHPM COXII Q06Y82 COXII) feature not found, no synonym matches a feature (Q06Y82_SCHPM COXII Q06Y82 COXII) feature not found, no synonym matches a feature (Q06Y82_SCHPM COXII Q06Y82 COXII) feature not found, no synonym matches a feature (Q06Y82_SCHPM COXII Q06Y82 COXII) feature not found, no synonym matches a feature (Q06Y82_SCHPM COXII Q06Y82 COXII) feature not found, no synonym matches a feature (Q06Y82_SCHPM COXII Q06Y82 COXII) feature not found, no synonym matches a feature (YAYC_SCHPO SPAC4H3.12c Q10219 SPAC4H3.12c) feature not found, no synonym matches a feature (YDA3_SCHPO SPAC1F12.03c Q10345 SPAC1F12.03c) feature not found, no synonym matches a feature (YDA3_SCHPO SPAC1F12.03c Q10345 SPAC1F12.03c) feature not found, no synonym matches a feature (YDA3_SCHPO SPAC1F12.03c Q10345 SPAC1F12.03c) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q12728_SCHPM Q12728 Q12728) feature not found, no synonym matches a feature (Q1L843_SCHPM Q1L843 Q1L843) feature not found, no synonym matches a feature (Q35901_SCHPM Q35901 Q35901) feature not found, no synonym matches a feature (Q35901_SCHPM Q35901 Q35901) feature not found, no synonym matches a feature (Q35901_SCHPM Q35901 Q35901) feature not found, no synonym matches a feature (Q35901_SCHPM Q35901 Q35901) feature not found, no synonym matches a feature (Q35901_SCHPM Q35901 Q35901) feature not found, no synonym matches a feature (Q564N4_SCHPM MOE1 Q564N4 MOE1) feature not found, no synonym matches a feature (Q564N4_SCHPM MOE1 Q564N4 MOE1) feature not found, no synonym matches a feature (Q564N4_SCHPM MOE1 Q564N4 MOE1) feature not found, no synonym matches a feature (Q7YFV0_SCHPM CoxII Q7YFV0 CoxII) feature not found, no synonym matches a feature (Q7YFV0_SCHPM CoxII Q7YFV0 CoxII) feature not found, no synonym matches a feature (Q7YFV0_SCHPM CoxII Q7YFV0 CoxII) feature not found, no synonym matches a feature (Q7YFV0_SCHPM CoxII Q7YFV0 CoxII) feature not found, no synonym matches a feature (Q7YFV0_SCHPM CoxII Q7YFV0 CoxII) feature not found, no synonym matches a feature (Q7YFV0_SCHPM CoxII Q7YFV0 CoxII) feature not found, no synonym matches a feature (Q7YFV0_SCHPM CoxII Q7YFV0 CoxII) feature not found, no synonym matches a feature (Q7YFV0_SCHPM CoxII Q7YFV0 CoxII) feature not found, no synonym matches a feature (Q8X1T1_SCHPM sin1+ Q8X1T1 sin1+) feature not found, no synonym matches a feature (Q8X1Z5_SCHPM Q8X1Z5 Q8X1Z5) feature not found, no synonym matches a feature (S6BDF9_SCHPM S6BDF9 S6BDF9) feature not found, no synonym matches a feature (S6BDF9_SCHPM S6BDF9 S6BDF9) feature not found, no synonym matches a feature (S6BME7_SCHPM fip1 S6BME7 fip1) feature not found, no synonym matches a feature (S6BME7_SCHPM fip1 S6BME7 fip1) feature not found, no synonym matches a feature (S6BME7_SCHPM fip1 S6BME7 fip1) feature not found, no synonym matches a feature (S6BME7_SCHPM fip1 S6BME7 fip1) feature not found, no synonym matches a feature (S6BME7_SCHPM fip1 S6BME7 fip1) feature not found, no synonym matches a feature (S6BSJ4_SCHPM S6BSJ4 S6BSJ4) feature not found, no synonym matches a feature (S6BSJ4_SCHPM S6BSJ4 S6BSJ4) feature not found, no synonym matches a feature (S6BSK0_SCHPM spt6 S6BSK0 spt6) feature not found, no synonym matches a feature (S6BSK0_SCHPM spt6 S6BSK0 spt6) feature not found, no synonym matches a feature (S6BSK0_SCHPM spt6 S6BSK0 spt6) feature not found, no synonym matches a feature (S6BSK0_SCHPM spt6 S6BSK0 spt6)