Index of /dumps/releases/pombase-2025-04-01/logs

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[TXT]all_contig_warnings.txt2025-04-01 07:28 1.5K 
[TXT]cv_name_mismatches.txt2025-04-01 07:28 0  
[TXT]db_xref_problems.txt2025-04-01 07:28 0  
[TXT]duplicated_sub_qual_problems.txt2025-04-01 07:28 0  
[TXT]evidence_problems.txt2025-04-01 07:28 0  
[TXT]feature_warnings.txt2025-04-01 07:28 532  
[ ]log.2025-04-01-00-12-32.add-missing-allele-names2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.allele-comments-from-supporting-data2025-04-01 07:28 685  
[ ]log.2025-04-01-00-12-32.allele-synonyms-from-supporting-data2025-04-01 07:28 192  
[ ]log.2025-04-01-00-12-32.alleles_of_type_other2025-04-01 07:28 8.4K 
[TXT]log.2025-04-01-00-12-32.annotation_comments.tsv2025-04-01 07:28 2.5M 
[ ]log.2025-04-01-00-12-32.annotation_counts_by_cv2025-04-01 07:28 54K 
[ ]log.2025-04-01-00-12-32.biogrid-load-output2025-04-01 07:28 599K 
[ ]log.2025-04-01-00-12-32.cerevisiae_orthologs2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.AlleleNotStartingWithGeneName2025-04-01 07:28 1.4K 
[ ]log.2025-04-01-00-12-32.chado_checks.GenotypeBackgrounds2025-04-01 07:28 14K 
[ ]log.2025-04-01-00-12-32.chado_checks.XrefCheck2025-04-01 07:28 10K 
[ ]log.2025-04-01-00-12-32.chado_checks.allele_with_space_in_name2025-04-01 07:28 490  
[ ]log.2025-04-01-00-12-32.chado_checks.alleles_instance_of_gene2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.annotation_count2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.annotation_with_no_evidence2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.badly_formatted_pro_ids2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.badly_named_deletion_alleles2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.canto_annotations2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.duplicate_allele_descriptions2025-04-01 07:28 262  
[ ]log.2025-04-01-00-12-32.chado_checks.duplicate_go_annotation2025-04-01 07:28 32K 
[ ]log.2025-04-01-00-12-32.chado_checks.duplicate_pro_ids2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.duplicated_allele_names2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.enough_genetic_interactions2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.enough_isa_cvterm_rels2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.enough_physical_interactions2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.exists_during_extensions_not_in_cell_cycle_phase2025-04-01 07:28 8.7K 
[ ]log.2025-04-01-00-12-32.chado_checks.extension_relation_genes_exist2025-04-01 07:28 277  
[ ]log.2025-04-01-00-12-32.chado_checks.go_annotation_count2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.happens_during_extensions_not_in_cell_cycle_phase2025-04-01 07:28 7.0K 
[ ]log.2025-04-01-00-12-32.chado_checks.illegal_with_prefix2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.inconsistent_temperature_conditions2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.missing_assayed_using2025-04-01 07:28 1.9K 
[ ]log.2025-04-01-00-12-32.chado_checks.modification_on_wrong_residue2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.no_duplicate_orthologs2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.no_duplicate_pombe_gene_names2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.no_population_terms_with_penetrance2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.only_ascii_characters_in_feature_name2025-04-01 07:28 366  
[ ]log.2025-04-01-00-12-32.chado_checks.pombe_genes2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.prop_values_with_missing_terms2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.quantitative_annotation_qualifiers2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.single_wt_allele_with_wild_type_expression2025-04-01 07:28 208  
[ ]log.2025-04-01-00-12-32.chado_checks.species_dist_term_name_typos2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.unknown_allele_name_synonym_matches2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.unnamed_alleles2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.chado_checks.unnamed_unrecorded_alleles2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.curation-tool-data-load-output2025-04-01 07:28 2.3K 
[ ]log.2025-04-01-00-12-32.disease_associations2025-04-01 07:28 206  
[ ]log.2025-04-01-00-12-32.excluded_fypo_terms2025-04-01 07:28 46K 
[ ]log.2025-04-01-00-12-32.excluded_fypo_terms_softcheck2025-04-01 07:28 142K 
[ ]log.2025-04-01-00-12-32.excluded_go_terms_softcheck2025-04-01 07:28 28K 
[ ]log.2025-04-01-00-12-32.export_warnings2025-04-01 07:28 467  
[ ]log.2025-04-01-00-12-32.extension_relation_counts2025-04-01 07:28 3.5K 
[ ]log.2025-04-01-00-12-32.fix-allele-names2025-04-01 07:28 2.9K 
[ ]log.2025-04-01-00-12-32.gaf-load-output2025-04-01 07:28 131K 
[ ]log.2025-04-01-00-12-32.generic-term-mapping2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.genes_of_gocam_title_terms2025-04-01 07:28 14K 
[ ]log.2025-04-01-00-12-32.go-filter-cacao-duplicates2025-04-01 07:28 1.0K 
[ ]log.2025-04-01-00-12-32.go-filter-intact-duplicates2025-04-01 07:28 89  
[ ]log.2025-04-01-00-12-32.go-filter-uniprot-duplicates2025-04-01 07:28 2.6K 
[ ]log.2025-04-01-00-12-32.go-term-mapping2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.gocam-json-data-file2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.human_orthologs2025-04-01 07:28 79  
[ ]log.2025-04-01-00-12-32.legacy_go_from_contigs2025-04-01 07:28 724  
[ ]log.2025-04-01-00-12-32.legacy_modifications_from_contigs2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.legacy_phaf_from_contigs2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.manual_paralogs2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.modification2025-04-01 07:28 644  
[ ]log.2025-04-01-00-12-32.modification-filter-duplicates2025-04-01 07:28 11K 
[ ]log.2025-04-01-00-12-32.monarch_causal2025-04-01 07:28 1.4K 
[ ]log.2025-04-01-00-12-32.monarch_noncausal2025-04-01 07:28 424  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_166019_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_1315954_phaf2025-04-01 07:28 392  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_1332977_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_2657742_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_7969124_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_8065905_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_8382769_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_8390662_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_8663159_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_8665408_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_9003295_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_9563836_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_9649519_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_9658208_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_9917066_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_10079327_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_10449724_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_10924454_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_11030343_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_11893740_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_12615979_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_12618370_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_15121844_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_15579205_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_15797925_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_15821139_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_16096637_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_16169489_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_16252005_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_16371652_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_16615890_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_16618806_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_18045993_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_18378696_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_18503029_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_18665268_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_18684775_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_19250904_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_19264558_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_19422421_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_19542312_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_19664060_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_19672306_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_20473289_phaf2025-04-01 07:28 483  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_20519959_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_20537132_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_20625380_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_21247416_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_21340088_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_21364888_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_21561865_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_21760946_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_21850271_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_22252817_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_22806344_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_23173672_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_23365689_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_23695302_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_23697806_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_23738021_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_23861937_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_23950735_phaf2025-04-01 07:28 119  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_24362309_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_24463365_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_24727291_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_25210736_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_25373780_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_25452419_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_25483073_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_25552606_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_25580577_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_25651869_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_26173815_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_26628015_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_26791325_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_27168121_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_27172183_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_27255861_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_27558664_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_27887640_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_27918601_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_28410370_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_28945192_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_29038548_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_29259000_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_30099677_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_30647105_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_32062975_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_32101745_phaf2025-04-01 07:28 120  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_33260998_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_34250083_phaf2025-04-01 07:28 1.2K 
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_34706246_phaf2025-04-01 07:28 35K 
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_34984977_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_35820914_long_lived.phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_35820914_short_lived.phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_37787768_phaf2025-04-01 07:28 0  
[ ]log.2025-04-01-00-12-32.phenotypes_from_PMID_39476757_phaf2025-04-01 07:28 505  
[ ]log.2025-04-01-00-12-32.protein_family_term_annotation2025-04-01 07:28 45K 
[ ]log.2025-04-01-00-12-32.qc_queries2025-04-01 07:28 5.0K 
[ ]log.2025-04-01-00-12-32.qualifier_counts_by_cv2025-04-01 07:28 761  
[ ]log.2025-04-01-00-12-32.qualitative2025-04-01 07:28 19K 
[ ]log.2025-04-01-00-12-32.quantitative2025-04-01 07:28 47K 
[ ]log.2025-04-01-00-12-32.web-json-write2025-04-01 07:28 0  
[TXT]mapping_problems.txt2025-04-01 07:28 0  
[TXT]misc_term_warnings.txt2025-04-01 07:28 0  
[TXT]mismatches.txt2025-04-01 07:28 0  
[TXT]ortholog_problems.txt2025-04-01 07:28 0  
[TXT]pseudogene_mismatches.txt2025-04-01 07:28 0  
[TXT]qualifier_problems.txt2025-04-01 07:28 1.3K 
[TXT]synonym_match_problems.txt2025-04-01 07:28 0  
[TXT]target_problems.txt2025-04-01 07:28 0  
[TXT]unknown_cv_names.txt2025-04-01 07:28 0  
[TXT]unknown_term_names.txt2025-04-01 07:28 0  
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