# terms

id: PBO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 188B, pseudogene","termid":"PBO:0042117"}


id: FYPO:0001147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells).","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mating efficiency","termid":"FYPO:0001147"}


id: PR:Q09710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.03c","synonyms":[{"name":"Spom972h-SPAC18B11.03c","type":"exact"}],"termid":"PR:Q09710"}


id: PR:Q9Y7Z4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04103","PANTHER:PTHR13302:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.05","secondary_identifiers":["UniProtKB:Q9Y7Z4"],"synonyms":[{"name":"COG complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG3","type":"exact"},{"name":"component of oligomeric Golgi complex 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Z4"}


id: GO:1901520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aspyridone B.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"aspyridone B metabolic process","termid":"GO:1901519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"aspyridone B catabolic process","synonyms":[{"name":"aspyridone B breakdown","type":"exact"},{"name":"aspyridone B catabolism","type":"exact"},{"name":"aspyridone B degradation","type":"exact"}],"termid":"GO:1901520"}


id: GO:0098822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine to form peptidyl-L-cysteine persulfide.","definition_xrefs":["PMID:11592406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine modification to L-cysteine persulfide","secondary_identifiers":["RESID:AA0269"],"termid":"GO:0098822"}


id: PBO:0039693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylaminoacyl-peptide hydrolase","termid":"PBO:0039693"}


id: GO:0061639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cytokinesis that involves a set of conserved proteins including the Cdv proteins, and results in the formation of two similarly sized and shaped cells.","definition_xrefs":["GOC:dph","PMID:18987308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"Cdv-dependent cytokinesis","termid":"GO:0061639"}


id: PR:Q9HGN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An eIF-2-alpha kinase GCN2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03261","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-2-alpha kinase GCN2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.09","secondary_identifiers":["UniProtKB:Q9HGN1"],"synonyms":[{"name":"Spom972h-EIF2AK4","type":"exact"},{"name":"serine/threonine-protein kinase gcn2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine/threonine-protein kinase ppk28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGN1"}


id: GO:0051064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTTP + thioredoxin disulfide + H2O = TTP + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["MetaCyc:1.17.4.2-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-triphosphate reductase activity","termid":"GO:0008998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"TTP reductase activity","secondary_identifiers":["EC:1.17.4.-"],"synonyms":[{"name":"TTP reduction","type":"related"}],"termid":"GO:0051064"}


id: PBO:0025429
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichothiodystrophy","termid":"PBO:0025429"}


id: PBO:0087017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide reductase inhibitor; intrinsically disordered protein that binds to and inhibits Rnr2p; involved in the Mec1p-mediated checkpoint pathway; transcription is induced by genotoxic stress and by activation of the Rad53p pathway; protein abundance increases in response to DNA replication stress","termid":"PBO:0087017"}


id: GO:1902322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:15340492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902322"}


id: GO:0048939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the anterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell differentiation","termid":"GO:0048913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell development","termid":"GO:0048939"}


id: GO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dendritic cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}


id: PBO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P","termid":"PBO:0090379"}


id: SO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a vault RNA.","definition_xrefs":["PMID:19298825","PMID:19491402","PMID:30773316","PMID:22058117","PMID:9535882","PMID:22926522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA_gene","termid":"SO:0002358"}


id: GO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase complex","termid":"GO:0009320"}


id: PBO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glucose_import","termid":"PBO:0030818"}


id: PBO:0039147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 2","termid":"PBO:0039147"}


id: GO:0050865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell activation, the change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell activation","termid":"GO:0050865"}


id: PBO:0031402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity","termid":"PBO:0031402"}


id: GO:0034377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-covalent aggregation and arrangement of proteins and lipids to form a plasma lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex assembly","termid":"GO:0065005"},{"relation_name":"is_a","term_name":"plasma lipoprotein particle organization","termid":"GO:0071827"},{"relation_name":"part_of","term_name":"regulation of plasma lipoprotein particle levels","termid":"GO:0097006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"plasma lipoprotein particle assembly","termid":"GO:0034377"}


id: PR:O14339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1701 gene.","definition_xrefs":["UniProtKB:O14339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.04","synonyms":[{"name":"Spom972h-rpl1701","type":"exact"}],"termid":"PR:O14339"}


id: PBO:0034458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_iron_assimilation_gene_mRNA_during_vegetative_growth","termid":"PBO:0034458"}


id: PBO:0060396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2","termid":"PBO:0060396"}


id: PR:Q9Y7U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gep4 gene.","definition_xrefs":["UniProtKB:Q9Y7U3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphatase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.02","synonyms":[{"name":"PGP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gep4","type":"exact"}],"termid":"PR:Q9Y7U3"}


id: GO:1903200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-dopa decarboxylase activity.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:19703902","GOC:bf","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lyase activity","termid":"GO:0051349"},{"relation_name":"is_a","term_name":"regulation of L-dopa decarboxylase activity","termid":"GO:1903198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-dopa decarboxylase activity","synonyms":[{"name":"activation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"narrow"},{"name":"activation of DDC activity","type":"narrow"},{"name":"activation of DOPA decarboxylase activity","type":"narrow"},{"name":"activation of L-dopa decarboxylase activity","type":"narrow"},{"name":"positive regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"positive regulation of DDC activity","type":"exact"},{"name":"positive regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"up regulation of DDC activity","type":"exact"},{"name":"up regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"up-regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"up-regulation of DDC activity","type":"exact"},{"name":"up-regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up-regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"upregulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"upregulation of DDC activity","type":"exact"},{"name":"upregulation of DOPA decarboxylase activity","type":"exact"},{"name":"upregulation of L-dopa decarboxylase activity","type":"exact"}],"termid":"GO:1903200"}


id: GO:2001139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"negatively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipid transport","termid":"GO:2001139"}


id: PBO:0045689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNLL2 divergent transcript","termid":"PBO:0045689"}


id: PBO:0079369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 3","termid":"PBO:0079369"}


id: PBO:0043686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 pseudogene 2","termid":"PBO:0043686"}


id: PBO:0001633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs complex subunit Pep5/Vps11 (predicted)","termid":"PBO:0001633"}


id: PBO:0071412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 18","termid":"PBO:0071412"}


id: GO:0004707
data:
  {"annotated_genes":["SJAG_02923","SJAG_04551","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74092,90005,91968],"is_not":false,"summary":null,"term":"GO:0004707"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein + ATP = protein phosphate + ADP. This reaction is the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli.","definition_xrefs":["ISBN:0198547684","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02923":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0140096","GO:0003674","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"MAP kinase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0008338","Reactome:R-HSA-445079","GO:0008339","GO:0016908","Reactome:R-HSA-198733","Reactome:R-HSA-111898","Reactome:R-HSA-5654566","MetaCyc:2.7.11.24-RXN","KEGG_REACTION:R00162","Reactome:R-HSA-451366","Reactome:R-HSA-5654565","Reactome:R-HSA-73722","Reactome:R-HSA-5654562","GO:0016909","Reactome:R-HSA-5654560","EC:2.7.11.24","Reactome:R-HSA-9626832"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKK-activated) activity","type":"related"},{"name":"ERK","type":"related"},{"name":"ERK1","type":"exact"},{"name":"ERK2","type":"related"},{"name":"MAP kinase 1 activity","type":"narrow"},{"name":"MAP kinase 2 activity","type":"narrow"},{"name":"MAPK","type":"related"},{"name":"MBP kinase I activity","type":"narrow"},{"name":"MBP kinase II activity","type":"narrow"},{"name":"SAP kinase activity","type":"narrow"},{"name":"SAPK","type":"narrow"},{"name":"extracellular signal-regulated kinase activity","type":"narrow"},{"name":"mitogen activated kinase activity","type":"exact"},{"name":"mitogen-activated protein kinase activity","type":"related"},{"name":"myelin basic protein kinase activity","type":"narrow"},{"name":"stress-activated kinase activity","type":"narrow"},{"name":"stress-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004707","terms_by_termid":{"GO:0004707":null}}


id: GO:0047554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-2H-pyran-4,6-dicarboxylate + H2O = 4-carboxy-2-hydroxyhexa-2,4-dienedioate + H+.","definition_xrefs":["RHEA:10644","EC:3.1.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"2-pyrone-4,6-dicarboxylate lactonase activity","secondary_identifiers":["MetaCyc:RXN-2462","KEGG_REACTION:R04277"],"synonyms":[{"name":"2-pyrone-4,6-dicarboxylate lactonohydrolase activity","type":"related"}],"termid":"GO:0047554"}


id: PBO:0064732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 68","termid":"PBO:0064732"}


id: PBO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 42","termid":"PBO:0071201"}


id: PBO:0004738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (predicted)","termid":"PBO:0004738"}


id: GO:0004679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction requires the presence of AMP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016740","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"AMP-activated protein kinase activity","secondary_identifiers":["EC:2.7.11.11","Reactome:R-HSA-380927","Reactome:R-HSA-5673768","Reactome:R-HSA-200423","Reactome:R-HSA-163691","Reactome:R-HSA-6805470","Reactome:R-HSA-447074","Reactome:R-HSA-1592244"],"synonyms":[{"name":"5'-AMP-activated protein kinase activity","type":"exact"},{"name":"AMPK activity","type":"related"},{"name":"SNF1A/AMP-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004679"}


id: GO:0019552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-hydroxyglutarate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P162-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glutamate catabolic process","termid":"GO:0019670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0006520","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glutamate catabolic process via 2-hydroxyglutarate","synonyms":[{"name":"glutamate fermentation via 2-hydroxyglutarate","type":"exact"}],"termid":"GO:0019552"}


id: PATO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"female fertility","termid":"PATO:0000277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female semi-sterile","termid":"PATO:0001763"}


id: PBO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member D","termid":"PBO:0043280"}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: GO:1900405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cell separation after cytokinesis.","definition_xrefs":["PMID:12665550","GOC:mah","GOC:TermGenie","PMID:10491317"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell separation after cytokinesis by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900405)","synonyms":[{"name":"regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900405"}


id: PATO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001166 urine enzyme composition (obsolete PATO:0001166)","termid":"PATO:0001166"}


id: PBO:0049356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 14","termid":"PBO:0049356"}


id: GO:0006948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of syncytia-forming cell-cell fusion, caused by a virus.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction by virus of host cell-cell fusion","synonyms":[{"name":"induction by virus of cell-cell fusion in host","type":"exact"},{"name":"viral-induced cell-cell fusion","type":"exact"},{"name":"viral-induced host cell-cell fusion","type":"exact"},{"name":"viral-induced membrane fusion","type":"narrow"}],"termid":"GO:0006948"}


id: PBO:0090954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rsd1","termid":"PBO:0090954"}


id: PBO:0090977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39","termid":"PBO:0090977"}


id: PBO:0049645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.Y histone 1","termid":"PBO:0049645"}


id: PR:P28758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superoxide dismutase [Cu-Zn] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10003:SF11","PRO:DNx","OMA:SCHPO00397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase [Cu-Zn] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.10c","secondary_identifiers":["UniProtKB:P28758"],"synonyms":[{"name":"Spom972h-SOD1","type":"exact"}],"termid":"PR:P28758"}


id: PBO:0059469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musashi RNA binding protein 1","termid":"PBO:0059469"}


id: PBO:0082124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid phosphatase; involved in the non-vesicular transport of sterols in both directions between the endoplasmic reticulum and plasma membrane; deletion confers sensitivity to nickel","termid":"PBO:0082124"}


id: GO:0010759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage chemotaxis. Macrophage chemotaxis is the movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of macrophage chemotaxis","termid":"GO:0010758"},{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"is_a","term_name":"positive regulation of macrophage migration","termid":"GO:1905523"},{"relation_name":"positively_regulates","term_name":"macrophage chemotaxis","termid":"GO:0048246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage chemotaxis","termid":"GO:0010759"}


id: PBO:0069537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 807, pseudogene","termid":"PBO:0069537"}


id: GO:1902838
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear migration along microtubule.","definition_xrefs":["PMID:23087209","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of nuclear migration along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"regulation of nuclear movement, microtubule-mediated","type":"broad"},{"name":"regulation of nucleus migration","type":"broad"},{"name":"regulation of transport of nucleus by microtubules","type":"exact"},{"name":"regulation of transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:1902838","terms_by_termid":{"GO:1902854":null}}


id: PBO:0089874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron-specific pre-mRNA splicing-ubiquitin fusion protein Sde2","termid":"PBO:0089874"}


id: PBO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonicaciduria","termid":"PBO:0000195"}


id: FYPO:0001307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of long-chain fatty acid-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"decreased lcfa-ligase activity","type":"exact"},{"name":"reduced long-chain fatty acid-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001307"}


id: FYPO:0007385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a longer time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:28366743","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein-protein interaction","synonyms":[{"name":"increased duration of protein binding","type":"exact"}],"termid":"FYPO:0007385"}


id: FYPO:0000505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of necrotic cell death is increased. Necrotic cell death is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["GO:0070265","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased necrotic cell death (obsolete FYPO:0000505)","synonyms":[{"name":"necrotic cell death: increased","type":"related"}],"termid":"FYPO:0000505"}


id: PBO:0032705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Holliday_junctions","termid":"PBO:0032705"}


id: GO:0039567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity by retaining STAT1 in the cytoplasm, so STAT1 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:16254375","PMID:14557668","PMID:17287281"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT1 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039567)","synonyms":[{"name":"cytoplasmic sequestration of STAT1","type":"broad"},{"name":"suppression by virus of host STAT1 activity by cytoplasmic sequestering of STAT1","type":"exact"}],"termid":"GO:0039567"}


id: GO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by post-translational N-methylation of the pilin monomers.","definition_xrefs":["GOC:pamgo_curators","PMID:28496159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type IV pilus","synonyms":[{"name":"TFP","type":"exact"},{"name":"type 4 pilus","type":"exact"},{"name":"type IV fimbriae","type":"exact"}],"termid":"GO:0044096"}


id: PBO:0073064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 2","termid":"PBO:0073064"}


id: PBO:0054182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1556","termid":"PBO:0054182"}


id: PBO:0055402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2832","termid":"PBO:0055402"}


id: PBO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 22 pseudogene","termid":"PBO:0042647"}


id: FYPO:0006493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of chitin synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased chitin synthase activity","termid":"FYPO:0006493"}


id: PBO:0076971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 2","termid":"PBO:0076971"}


id: GO:0010420
data:
  {"annotated_genes":["SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110093],"is_not":false,"summary":null,"term":"GO:0010420"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-5-polyprenylbenzoic acid + S-adenosyl-L-methionine = 3-methoxy-4-hydroxy-5-polyprenylbenzoic acid + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:9628017","PMID:10419476","PMID:23190198","RHEA:44452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-9281","Reactome:R-HSA-2162193","GO:1990886","EC:2.1.1.114"],"synonyms":[{"name":"polyprenyldihydroxybenzoate methyltransferase activity","type":"related"}],"termid":"GO:0010420","terms_by_termid":{"GO:0010420":null}}


id: GO:0060521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range from urogenital sinus mesenchymal cells to cells of the urogenital epithelium resulting in the epithelial cells adopting a prostatic fate.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"inductive mesenchymal to epithelial cell signaling","termid":"GO:0060522"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling involved in prostate gland development","termid":"GO:0060739"},{"relation_name":"part_of","term_name":"prostate induction","termid":"GO:0060514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in prostate induction","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in prostate induction","type":"exact"}],"termid":"GO:0060521"}


id: PBO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 4","termid":"PBO:0043804"}


id: GO:0005384
data:
  {"annotated_genes":["SJAG_03850","SJAG_04867","SJAG_01007","SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73327,75038],"is_not":false,"summary":null,"term":"GO:0005384"},{"annotations":[104020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[86884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of manganese (Mn) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"manganese ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-8959798","RHEA:28699"],"termid":"GO:0005384","terms_by_termid":{"GO:0005384":null,"GO:0010486":null,"GO:0015410":null}}


id: GO:0009791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic development","termid":"GO:0009791"}


id: PATO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased female receptivity","synonyms":[{"name":"low female receptivity","type":"exact"}],"termid":"PATO:0001724"}


id: GO:0071750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two monomeric IgA immunoglobulin complexes linked through both direct disulfide bonds and through a disulfide binded monomer of J chain acting as a bridge. Each IgA monomer consists of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds. Dimeric IgA is sometimes complexed additionally with secretory component, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric IgA immunoglobulin complex","termid":"GO:0071749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"dimeric IgA immunoglobulin complex","synonyms":[{"name":"dimeric IgA antibody","type":"exact"},{"name":"dimeric IgA1 antibody","type":"narrow"}],"termid":"GO:0071750"}


id: PBO:0027510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_following_spore_germination,_single_cell_division,_unequal_chromosome_segregation","termid":"PBO:0027510"}


id: GO:0051555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonols, a member of a class of vascular pigments formed by consecutive oxidative processes from the flavonoid intermediates flavanones and dihydroflavonols. Flavonols are the most widespread of the flavonoids and have a wide array of physiological activities.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"flavonol metabolic process","termid":"GO:0051554"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonol biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3101"],"termid":"GO:0051555"}


id: PBO:0067753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 52","termid":"PBO:0067753"}


id: PBO:0000855
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.1","termid":"PBO:0000855"}


id: GO:0043998
data:
  {"annotated_genes":["SJAG_03537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73880],"is_not":false,"summary":null,"term":"GO:0043998"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine = CoA + histone H2A N6-acetyl-L-lysine.","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003824","GO:0034212","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"histone H2A acetyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"H2A histone acetylase activity","type":"exact"},{"name":"H2A histone acetyltransferase activity","type":"exact"},{"name":"H2A histone lysine N-acetyltransferase activity","type":"exact"}],"termid":"GO:0043998","terms_by_termid":{"GO:0043998":null}}


id: GO:0097185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an azide stimulus.","definition_xrefs":["GOC:yaf","PMID:16846222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to inorganic substance","termid":"GO:0071241"},{"relation_name":"is_a","term_name":"response to azide","termid":"GO:0097184"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to azide","termid":"GO:0097185"}


id: PBO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 5","termid":"PBO:0048613"}


id: FYPO:0001206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which maltase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maltase activity","termid":"FYPO:0001184"},{"relation_name":"is_a","term_name":"abolished alpha-glucosidase activity","termid":"FYPO:0001205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished maltase activity","synonyms":[{"name":"maltase activity abolished","type":"exact"}],"termid":"FYPO:0001206"}


id: PBO:0034522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_arsenite","termid":"PBO:0034522"}


id: PBO:0090959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Loc1","termid":"PBO:0090959"}


id: GO:0072188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the metanephric cap acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system pattern specification","termid":"GO:0072048"},{"relation_name":"is_a","term_name":"metanephric cap formation","termid":"GO:0072187"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap specification","termid":"GO:0072188"}


id: GO:0002798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antibacterial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide production","termid":"GO:0002787"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide secretion","termid":"GO:0002795"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide secretion","termid":"GO:0002797"},{"relation_name":"negatively_regulates","term_name":"antibacterial peptide secretion","termid":"GO:0002779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006810"],"is_obsolete":false,"name":"negative regulation of antibacterial peptide secretion","synonyms":[{"name":"down regulation of antibacterial peptide secretion","type":"exact"},{"name":"down-regulation of antibacterial peptide secretion","type":"exact"},{"name":"downregulation of antibacterial peptide secretion","type":"exact"},{"name":"inhibition of antibacterial peptide secretion","type":"narrow"}],"termid":"GO:0002798"}


id: PR:Q9USK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C4B3.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.13","synonyms":[{"name":"Spom972h-SPCC4B3.13","type":"exact"}],"termid":"PR:Q9USK3"}


id: PBO:0051568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 13 receptor subunit alpha 2","termid":"PBO:0051568"}


id: PBO:0030045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_iron_starvation","termid":"PBO:0030045"}


id: SO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"},{"relation_name":"part_of","term_name":"ultracontig","termid":"SO:0000719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supercontig","synonyms":[{"name":"scaffold","type":"related"}],"termid":"SO:0000148"}


id: PBO:0031492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_actomyosin_contractile_ring_assembly","termid":"PBO:0031492"}


id: PBO:0043181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1 pseudogene 1","termid":"PBO:0043181"}


id: PBO:0080603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 37","termid":"PBO:0080603"}


id: GO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol phosphate biosynthetic process","termid":"GO:0010919"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of inositol phosphate biosynthetic process","termid":"GO:0060732"}


id: SO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_gene_segment","synonyms":[{"name":"V-J-GENE","type":"exact"},{"name":"VJ gene","type":"exact"}],"termid":"SO:0000576"}


id: PBO:0067023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 36, pseudogene","termid":"PBO:0067023"}


id: PBO:0051600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 23 receptor","termid":"PBO:0051600"}


id: GO:2000627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of miRNA catabolic process","synonyms":[{"name":"positive regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000627"}


id: GO:0016256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of high-mannose N-glycans by UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase and the subsequent removal of the N-acetylglucosamine residues yielding mannose-6-P that occurs in the ER-Golgi apparatus to N-glycans destined for the lysosome.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"},{"relation_name":"part_of","term_name":"protein targeting to lysosome","termid":"GO:0006622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"N-glycan processing to lysosome","termid":"GO:0016256"}


id: PR:O74883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12069:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.13","secondary_identifiers":["UniProtKB:O74883"],"synonyms":[{"name":"RNA polymerase III subunit C37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC330.13","type":"related"},{"name":"Spom972h-POLR3E","type":"exact"}],"termid":"PR:O74883"}


id: PBO:0057513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 631","termid":"PBO:0057513"}


id: PBO:0060736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 1","termid":"PBO:0060736"}


id: PBO:0074521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A13","termid":"PBO:0074521"}


id: GO:0061329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule principal cell. A Malpighian tubule principal cell is an epithelial secretory cell that transports cations into the lumen of the tubule.","definition_xrefs":["PMID:19783135","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule principal cell differentiation","termid":"GO:0061329"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: FYPO:0004601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to hydroxyurea. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001929"},{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000257","FYPO:0001320","FYPO:0000298","FYPO:0001312"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to hydroxyurea","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to HU","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004601"}


id: GO:2000519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 1 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell activation","termid":"GO:2000517"},{"relation_name":"positively_regulates","term_name":"T-helper 1 cell activation","termid":"GO:0035711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T-helper 1 cell activation","synonyms":[{"name":"positive regulation of Th1 cell activation","type":"exact"}],"termid":"GO:2000519"}


id: PBO:0005204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec15 (predicted)","termid":"PBO:0005204"}


id: PBO:0071513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 16","termid":"PBO:0071513"}


id: PBO:0027109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_protein_aggregate_level_during_cellular_response_to_heat","termid":"PBO:0027109"}


id: PBO:0081103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZEB2 antisense RNA 1","termid":"PBO:0081103"}


id: PR:P22774-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-2.","definition_xrefs":["PRO:DNx","UniProtKB:P22774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Short (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-2"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Short","type":"exact"}],"termid":"PR:P22774-2"}


id: FYPO:0006970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of bisphosphoglyceric acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular bisphosphoglyceric acid level","synonyms":[{"name":"decreased cellular bisphosphoglyceric acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular bisphosphoglyceric acid level during vegetative growth","type":"exact"},{"name":"decreased cellular diphosphoglycerate level","type":"related"},{"name":"decreased level of bisphosphoglyceric acid in cell","type":"exact"},{"name":"reduced cellular bisphosphoglyceric acid level","type":"exact"}],"termid":"FYPO:0006970"}


id: PBO:0035789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0035789"}


id: GO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support bridging a synaptic signaling receptor and a downstream signaling molecule.","definition_xrefs":["PMID:10506216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"synaptic receptor adaptor activity","synonyms":[{"name":"GKAP/Homer scaffold activity","type":"narrow"},{"name":"GKAP/Homer scaffold protein","type":"narrow"},{"name":"postsynaptic density scaffold protein","type":"narrow"}],"termid":"GO:0030160"}


id: PBO:0065252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20E","termid":"PBO:0065252"}


id: GO:0046290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid catabolic process","termid":"GO:0046288"},{"relation_name":"is_a","term_name":"isoflavonoid phytoalexin metabolic process","termid":"GO:0046289"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0019748","GO:0098754","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"isoflavonoid phytoalexin catabolic process","synonyms":[{"name":"isoflavonoid phytoalexin breakdown","type":"exact"},{"name":"isoflavonoid phytoalexin catabolism","type":"exact"},{"name":"isoflavonoid phytoalexin degradation","type":"exact"}],"termid":"GO:0046290"}


id: GO:0006127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transferring reducing equivalents from the cytosol into the mitochondria; NADH is used to synthesise glycerol 3-phosphate in the cytosol; this compound is then transported into the mitochondria where it is converted to dihydroxyacetone phosphate (DHAP) using FAD; DHAP then returns to the cytosol to complete the cycle.","definition_xrefs":["GOC:mtg_electron_transport","PMID:16368075","ISBN:0716720094","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH oxidation","termid":"GO:0006116"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"part_of","term_name":"respiratory electron transport chain","termid":"GO:0022904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"glycerophosphate shuttle","secondary_identifiers":["MetaCyc:PWY-6118"],"termid":"GO:0006127"}


id: PBO:0078979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 5-1","termid":"PBO:0078979"}


id: FYPO:0003372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during one or both meiotic nuclear divisions. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during meiotic cell cycle","termid":"FYPO:0006975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during meiosis","synonyms":[{"name":"RNA absent from cell during meiotic nuclear division","type":"exact"},{"name":"transcripts absent from cell during meiosis","type":"exact"},{"name":"undetectable cellular RNA level during meiosis","type":"exact"}],"termid":"FYPO:0003372"}


id: PBO:0091771
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CeNTaurin b5-like gene","termid":"PBO:0091771"}


id: PBO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Break Localizing","termid":"PBO:0013048"}


id: GO:2001228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to gamma radiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to gamma radiation","termid":"GO:0010332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to gamma radiation","synonyms":[{"name":"regulation of response to gamma ray","type":"related"},{"name":"regulation of response to gamma-ray photon","type":"related"}],"termid":"GO:2001228"}


id: PBO:0030616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cilofungin","termid":"PBO:0030616"}


id: GO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an elaioplast, a leucoplast in which oil is stored.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast organization","termid":"GO:0009659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elaioplast organization","synonyms":[{"name":"elaioplast organisation","type":"exact"},{"name":"elaioplast organization and biogenesis","type":"related"}],"termid":"GO:0043579"}


id: PBO:0064482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase iota","termid":"PBO:0064482"}


id: PBO:0060804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S7","termid":"PBO:0060804"}


id: FYPO:0005483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an inositol phosphate phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"increased inositol phosphate phosphatase activity","termid":"FYPO:0005483"}


id: PBO:0071444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 50","termid":"PBO:0071444"}


id: FYPO:0007043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alkaline phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"},{"relation_name":"is_a","term_name":"abnormal alkaline phosphatase activity","termid":"FYPO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished alkaline phosphatase activity","synonyms":[{"name":"alkaline phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0007043"}


id: PBO:0073543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 1","termid":"PBO:0073543"}


id: PBO:0086810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YIR042C is a non-essential gene","termid":"PBO:0086810"}


id: GO:2000199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"positively_regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ribonucleoprotein complex localization","synonyms":[{"name":"positive regulation of RNP localization","type":"exact"},{"name":"positive regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"positive regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"positive regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000199"}


id: GO:0043478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to a UV light stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"},{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation in response to UV light","termid":"GO:0043478"}


id: PBO:0074890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 65C","termid":"PBO:0074890"}


id: PBO:0040637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain abundant membrane attached signal protein 1","termid":"PBO:0040637"}


id: PR:O42661
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein Sm D1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01874","PANTHER:PTHR23338:SF18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein Sm D1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.07c","secondary_identifiers":["UniProtKB:O42661"],"synonyms":[{"name":"Sm-D1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPD1","type":"exact"},{"name":"snRNP core protein D1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42661"}


id: GO:1901231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901231)","synonyms":[{"name":"activation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"narrow"},{"name":"activation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"narrow"},{"name":"positive regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"positive regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"positive regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"},{"name":"up regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"up regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"up-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"up-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"upregulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"upregulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901231"}


id: GO:0097598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small amount of cytoplasm surrounded by a cell membrane that is generally retained in spermatozoa after spermiogenesis, when the majority of the cytoplasm is phagocytosed by Sertoli cells to produce what are called residual bodies. Initially, the droplet is located at the neck just behind the head of an elongated spermatid. During epididymal transit, the cytoplasmic droplet migrates caudally to the annulus at the end of the midpiece; the exact position and time varies by species. The cytoplasmic droplet consists of lipids, lipoproteins, RNAs, a variety of hydrolytic enzymes, receptors, ion channels, and Golgi-derived vesicles. The droplet may be involved in regulatory volume loss (RVD) at ejaculation, and in most species, though not in humans, the cytoplasmic droplet is lost at ejaculation. Note that the cytoplasmic droplet is distinct from 'excessive residual cytoplasm' that sometimes remains in epididymal spermatozoa, particularly when spermiogenesis has been disrupted.","definition_xrefs":["PMID:21076437","PMID:12672117","PMID:23159014","GOC:vesicles","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"sperm cytoplasmic droplet","synonyms":[{"name":"sperm residual cytoplasm","type":"exact"}],"termid":"GO:0097598"}


id: GO:1905416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:cilia","GOC:TermGenie","GO_REF:0000058","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amoeboid sperm motility","synonyms":[{"name":"regulation of ameboid sperm motility","type":"exact"},{"name":"regulation of ameboid sperm movement","type":"exact"},{"name":"regulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905416"}


id: PBO:0036087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036087"}


id: GO:0045746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Notch signaling pathway","synonyms":[{"name":"down regulation of Notch signaling pathway","type":"exact"},{"name":"down-regulation of Notch signaling pathway","type":"exact"},{"name":"downregulation of Notch signaling pathway","type":"exact"},{"name":"inhibition of Notch signaling pathway","type":"narrow"},{"name":"negative regulation of N signaling pathway","type":"exact"},{"name":"negative regulation of N signalling pathway","type":"exact"},{"name":"negative regulation of Notch signalling pathway","type":"exact"}],"termid":"GO:0045746"}


id: PBO:0026992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mannose_level_in_glycoprotein_glycan","termid":"PBO:0026992"}


id: GO:0005823
data:
  {"annotated_genes":["SJAG_02246","SJAG_04781","SJAG_04901","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90961],"is_not":false,"summary":null,"term":"GO:0005823"},{"annotations":[92442,93831,95362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the central plaque is embedded in the nuclear envelope.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"central plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005823","terms_by_termid":{"GO:0005823":null,"GO:0061493":null}}


id: PBO:0028638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiotic_spindle_absent_from_cell_during_meiosis_II","termid":"PBO:0028638"}


id: PBO:0070622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 6","termid":"PBO:0070622"}


id: PBO:0003636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5 (predicted)","termid":"PBO:0003636"}


id: PBO:0051466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-38 (pseudogene)","termid":"PBO:0051466"}


id: PBO:0053904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1194","termid":"PBO:0053904"}


id: PBO:0034796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family plus-end microtubule motor Tea2","termid":"PBO:0034796"}


id: FYPO:0004009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of ribosomal DNA into ribosomal RNA occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased rRNA transcription","synonyms":[{"name":"decreased rDNA transcription","type":"exact"},{"name":"decreased rRNA transcription during mitotic cell cycle","type":"related"},{"name":"decreased rRNA transcription during vegetative growth","type":"exact"},{"name":"decreased ribosomal RNA transcription","type":"exact"},{"name":"reduced rRNA transcription","type":"exact"}],"termid":"FYPO:0004009"}


id: GO:0018985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and ordering of the envelope of pronuclei.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear envelope organization","termid":"GO:0006998"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"pronuclear envelope synthesis","termid":"GO:0018985"}


id: PBO:0076450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tafazzin, phospholipid-lysophospholipid transacylase","termid":"PBO:0076450"}


id: FYPO:0004084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during nitrogen starvation","synonyms":[{"name":"normal cellular protein level during nitrogen starvation","type":"exact"},{"name":"normal protein accumulation during nitrogen starvation","type":"related"},{"name":"normal protein level during nitrogen depletion","type":"exact"},{"name":"normal protein level during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004084"}


id: PATO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000508 relative sensitivity value (obsolete PATO:0000508)","termid":"PATO:0000508"}


id: GO:0072595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location a specific location on or in an organelle, and is prevented from moving elsewhere. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein localization in organelle","synonyms":[{"name":"maintenance of protein localisation to organelle","type":"exact"},{"name":"maintenance of protein localization to organelle","type":"exact"}],"termid":"GO:0072595"}


id: GO:0008147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of bone","termid":"GO:0008147"}


id: GO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plays a role in regulating transcription initiation.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription initiation factor activity (obsolete GO:0016986)","synonyms":[{"name":"transcription initiation factor activity","type":"exact"},{"name":"transcriptional initiation factor activity","type":"exact"}],"termid":"GO:0016986"}


id: PBO:0030770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0030770"}


id: PBO:0042523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2 pseudogene 1","termid":"PBO:0042523"}


id: PBO:0082493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic epsilon subunit of the translation initiation factor eIF2B; eIF2B is the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression; mutations in human ortholog cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082493"}


id: PBO:0076691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 8","termid":"PBO:0076691"}


id: PBO:0002745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, human ZNF593 ortholog","termid":"PBO:0002745"}


id: PBO:0060904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 4","termid":"PBO:0060904"}


id: PBO:0086866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucose independent of the SNF3 regulated pathway; SKS1 has a paralog, VHS1, that arose from the whole genome duplication","termid":"PBO:0086866"}


id: PBO:0080742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPA binding protein 2","termid":"PBO:0080742"}


id: PBO:0109122
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoside Hydrolase family Sixteen","termid":"PBO:0109122"}


id: PR:O14141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Maf-like protein YhdE that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02236","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein C3G6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.03c","secondary_identifiers":["UniProtKB:O14141"],"synonyms":[{"name":"Spom972h-yhdE","type":"exact"}],"termid":"PR:O14141"}


id: GO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.","definition_xrefs":["PMID:8441407","GOC:cilia","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm flagellum","synonyms":[{"name":"sperm cilium","type":"exact"},{"name":"sperm tail","type":"exact"}],"termid":"GO:0036126"}


id: GO:0009086
data:
  {"annotated_genes":["SJAG_00881","SJAG_03614","SJAG_04459","SJAG_03712","SJAG_01466","SJAG_00234","SJAG_04425","SJAG_03152","SJAG_01702","SJAG_02689","SJAG_03102","SJAG_04042","SJAG_02972","SJAG_04953","SJAG_01404","SJAG_03671","SJAG_00309","SJAG_04305","SJAG_00395","SJAG_02290","SJAG_03881","SJAG_00419","SJAG_02293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71018,71820,74121,75318,75371,75623,77824,101403,107248,110728],"is_not":false,"summary":null,"term":"GO:0009086"},{"annotations":[65774,106380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[96169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[95514,91166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[78632,107697,77229,75868,77982,76783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[94564,102398,88301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01702":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03152":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04305":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"methionine anabolism","type":"exact"},{"name":"methionine biosynthesis","type":"exact"},{"name":"methionine formation","type":"exact"},{"name":"methionine synthesis","type":"exact"}],"termid":"GO:0009086","terms_by_termid":{"GO:0009086":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019284":null,"GO:0019509":null,"GO:0071266":null,"GO:1990355":null}}


id: PBO:0055801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 3","termid":"PBO:0055801"}


id: PBO:0091751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Knh4","termid":"PBO:0091751"}


id: FYPO:0007685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal under conditions of starvation for one or more nutrients.","definition_xrefs":["PomBase:mah","PMID:33574613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased vegetative cell population growth during nutrient starvation","synonyms":[{"name":"fast vegetative cell population growth during nutrient starvation","type":"narrow"},{"name":"increased vegetative cell population growth during nutrient depletion","type":"exact"},{"name":"increased vegetative cell population growth during nutrient deprivation","type":"exact"},{"name":"increased vegetative cell population growth during nutrient limitation","type":"exact"},{"name":"increased vegetative cell population growth in response to nutrient starvation","type":"exact"},{"name":"resistant to nutrient starvation","type":"related"}],"termid":"FYPO:0007685"}


id: FYPO:0006343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation, which normally results in a parallel arrangement of microtubules, does not occur.","definition_xrefs":["GO:0001578","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle formation","termid":"FYPO:0002761"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abolished microtubule bundle formation","synonyms":[{"name":"abolished microtubule array formation","type":"related"},{"name":"abolished microtubule bundling","type":"exact"},{"name":"microtubule bundle formation abolished","type":"exact"}],"termid":"FYPO:0006343"}


id: GO:1904669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ATP out of a cell or organelle.","definition_xrefs":["GO_REF:0000074","PMID:24286344","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transport","termid":"GO:0015867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"ATP export","synonyms":[{"name":"ATP efflux","type":"related"}],"termid":"GO:1904669"}


id: PATO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The period after death of the organism.","definition_xrefs":["thefreedictionary:thefreedictionary"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002084 post-mortem (obsolete PATO:0002084)","termid":"PATO:0002084"}


id: PBO:0069366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 626, pseudogene","termid":"PBO:0069366"}


id: PBO:0039753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 4","termid":"PBO:0039753"}


id: GO:0019449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including hypotaurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-cysteine catabolic process to hypotaurine","synonyms":[{"name":"L-cysteine breakdown to hypotaurine","type":"exact"},{"name":"L-cysteine degradation to hypotaurine","type":"exact"}],"termid":"GO:0019449"}


id: GO:1904152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["PMID:18555783","GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein exit from endoplasmic reticulum","termid":"GO:0070861"},{"relation_name":"regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"regulation of protein dislocation from ER","type":"exact"},{"name":"regulation of protein retrotranslocation from ER","type":"exact"},{"name":"regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904152"}


id: PBO:0054286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1677","termid":"PBO:0054286"}


id: PBO:0052679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 47","termid":"PBO:0052679"}


id: GO:0030381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the structural pattern of a chorion-containing eggshell such as those found in insects.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"chorion-containing eggshell formation","termid":"GO:0007304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion-containing eggshell pattern formation","termid":"GO:0030381"}


id: PBO:0076775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor and KH domain containing","termid":"PBO:0076775"}


id: GO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an actin fusion focus are transported to, or maintained in, a specific location. The actin fusion focus is an aster-like, F-actin-containing structure at the mating projection tip where the cell wall is degraded during conjugation with cellular fusion.","definition_xrefs":["PMID:28410370"],"gene_count":0,"genotype_count":0,"name":"obsolete actin fusion focus localization (obsolete GO:0061915)","synonyms":[{"name":"actin fusion focus localisation","type":"exact"}],"termid":"GO:0061915"}


id: PBO:0082391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta regulatory subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases","termid":"PBO:0082391"}


id: PBO:0087337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases","termid":"PBO:0087337"}


id: GO:1901433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to cycloalkane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to cycloalkane","termid":"GO:1901431"},{"relation_name":"positively_regulates","term_name":"response to cycloalkane","termid":"GO:0014071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to cycloalkane","synonyms":[{"name":"activation of response to cycloalkane","type":"narrow"},{"name":"up regulation of response to cycloalkane","type":"exact"},{"name":"up-regulation of response to cycloalkane","type":"exact"},{"name":"upregulation of response to cycloalkane","type":"exact"}],"termid":"GO:1901433"}


id: GO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of amino acid neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"amino acid neurotransmitter reuptake","synonyms":[{"name":"amino acid neurotransmitter import into glial cell","type":"narrow"},{"name":"amino acid neurotransmitter import into neuron","type":"narrow"},{"name":"amino acid neurotransmitter recycling","type":"broad"},{"name":"amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051933"}


id: PBO:0051384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 1","termid":"PBO:0051384"}


id: PBO:0083184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the Ty1 long terminal repeat, YPRWdelta12","termid":"PBO:0083184"}


id: GO:0005198
data:
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id: PBO:0004568
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id: PBO:0011408
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id: GO:0030557
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id: PBO:0075787
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id: GO:0032099
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id: PBO:0091529
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id: GO:1902840
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id: PBO:0031583
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id: PBO:0000256
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id: GO:0007421
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id: PBO:0075343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORL1 antisense RNA 1","termid":"PBO:0075343"}


id: PBO:0026731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_anaphase","termid":"PBO:0026731"}


id: PBO:0075748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 1","termid":"PBO:0075748"}


id: GO:0102295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylumbelliferyl glucoside + malonyl-CoA = 4-methylumbelliferone 6'-O-malonylglucoside + coenzyme A.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"4-methylumbelliferyl glucoside 6'-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12699"],"termid":"GO:0102295"}


id: GO:1901683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arsenate ion from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"arsenate ion transmembrane transporter activity","termid":"GO:1901683"}


id: PBO:0052085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAZN antisense RNA 1","termid":"PBO:0052085"}


id: PR:Q9P7M0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized aarF domain-containing protein kinase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 family protein C21C3.03, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.03","secondary_identifiers":["UniProtKB:Q9P7M0"],"synonyms":[{"name":"Spom972h-ADCK2","type":"exact"}],"termid":"PR:Q9P7M0"}


id: GO:0045815
data:
  {"annotated_genes":["SJAG_00584","SJAG_04613","SJAG_00735","SJAG_05020","SJAG_04038","SJAG_00743","SJAG_00045","SJAG_02768","SJAG_00349","SJAG_04005","SJAG_02571","SJAG_03884","SJAG_04097","SJAG_00641","SJAG_01513","SJAG_02773","SJAG_00581","SJAG_07011","SJAG_04274","SJAG_03758","SJAG_02872","SJAG_04205","SJAG_02458","SJAG_03776","SJAG_01230","SJAG_04561","SJAG_00873","SJAG_02329","SJAG_01711","SJAG_03576","SJAG_00913","SJAG_02798","SJAG_00868","SJAG_02927","SJAG_03145","SJAG_03752","SJAG_00925","SJAG_00769","SJAG_04596","SJAG_02170","SJAG_00440","SJAG_02869","SJAG_03839","SJAG_04213","SJAG_03431","SJAG_04194","SJAG_01622","SJAG_00746","SJAG_02254","SJAG_03441","SJAG_01110","SJAG_02846","SJAG_04758","SJAG_00184","SJAG_03668","SJAG_00896","SJAG_03599","SJAG_02589","SJAG_01111","SJAG_01016","SJAG_04989","SJAG_00087","SJAG_02314","SJAG_02447","SJAG_02541","SJAG_02906","SJAG_01804","SJAG_03579","SJAG_05313","SJAG_01475","SJAG_01611","SJAG_03033","SJAG_02981","SJAG_01465","SJAG_02385","SJAG_02066","SJAG_00441","SJAG_05192","SJAG_00739","SJAG_01658","SJAG_00914","SJAG_03787","SJAG_02500","SJAG_02549","SJAG_03694","SJAG_02466","SJAG_03944","SJAG_01325","SJAG_04576","SJAG_04755","SJAG_02303","SJAG_01653"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83464,83609,83776,83951,84129,84270,84634,84869,85035,85530,85799,86305,86406,86420,87084,87950,88445,89154,89422,89649,89752,89766,89782,89810,89837,89934,90263,91052,91077,91486,91490,92034,92240,92669,93390,93796,94058,94218,94685,94925,96480,97061,98244,98569,98811,99009,100000,100430,100438,101036,101180,102141,102293,102711,102821,103070,103257,103821,104130,104136,104414,104690,104811,104915,105787,105921,107031,107815,108066,108233,108385,108403,108564,109459,109470,109544,109630,109939,110227,110461,110580,110593,110887,111476,111539,111718,112070,112414,112592,112676,112699,112745],"is_not":false,"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"An epigenetic mechanism of regulation of gene expression that involves chromatin remodeling to capacitate gene expression by either modifying the chromatin fiber, the nucleosomal histones, or the DNA.","definition_xrefs":["PMID:34414474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression, epigenetic","termid":"GO:0141137"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":92,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00184":null,"SJAG_00349":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01804":null,"SJAG_02066":null,"SJAG_02170":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03145":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04561":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription initiation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048096"],"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin-mediated maintenance of transcription","type":"exact"},{"name":"epigenetic maintenance of chromatin in transcription-competent conformation","type":"exact"},{"name":"euchromatin assembly","type":"related"},{"name":"euchromatin organisation","type":"related"},{"name":"euchromatin organization","type":"related"},{"name":"long-term maintenance of gene activation","type":"related"},{"name":"maintenance of chromatin in transcription-competent conformation","type":"exact"},{"name":"transciptional initiation-coupled chromatin remodeling","type":"exact"},{"name":"transciptional initiation-coupled chromatin remodelling","type":"exact"},{"name":"transcription initiation coupled chromatin remodeling","type":"exact"},{"name":"transcription initiation coupled chromatin remodelling","type":"exact"},{"name":"transcriptional initiation-coupled chromatin remodeling","type":"exact"},{"name":"transcriptional initiation-coupled chromatin remodelling","type":"exact"}],"termid":"GO:0045815","terms_by_termid":{"GO:0045815":null}}


id: PBO:0090616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor Ump1","termid":"PBO:0090616"}


id: GO:1903493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a clopidogrel stimulus. Clopidogrel is a is an oral, thienopyridine-class antiplatelet agent used to inhibit blood clots in coronary artery disease, peripheral vascular disease, and cerebrovascular disease.","definition_xrefs":["PMID:23392654","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to clopidogrel","termid":"GO:1903493"}


id: PBO:0084359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucyl aminopeptidase yscIV with epoxide hydrolase activity; metalloenzyme containing one zinc atom; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; also known as leukotriene A4 hydrolase","termid":"PBO:0084359"}


id: PBO:0055536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2972","termid":"PBO:0055536"}


id: PBO:0048430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 1","termid":"PBO:0048430"}


id: PBO:0055217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2643","termid":"PBO:0055217"}


id: PATO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in a bearer by virtue of the bearer's curving inward.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concave","termid":"PATO:0001857"}


id: GO:0008445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-aspartate + H2O + O2 = oxaloacetate + NH3 + hydrogen peroxide.","definition_xrefs":["RHEA:12512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-aspartate oxidase activity","secondary_identifiers":["Reactome:R-HSA-6810076","EC:1.4.3.1","MetaCyc:D-ASPARTATE-OXIDASE-RXN"],"synonyms":[{"name":"D-aspartate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"D-aspartic oxidase activity","type":"related"},{"name":"aspartic oxidase activity","type":"related"}],"termid":"GO:0008445"}


id: GO:0090344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell aging (obsolete GO:0090344)","termid":"GO:0090344"}


id: GO:0075293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host pH environment","synonyms":[{"name":"response of symbiont to host pH environment","type":"exact"}],"termid":"GO:0075293"}


id: GO:1905157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photosynthesis.","definition_xrefs":["GOC:TermGenie","PMID:7592491","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"positively_regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photosynthesis","synonyms":[{"name":"activation of photosynthesis","type":"narrow"},{"name":"up regulation of photosynthesis","type":"exact"},{"name":"up-regulation of photosynthesis","type":"exact"},{"name":"upregulation of photosynthesis","type":"exact"}],"termid":"GO:1905157"}


id: PBO:0057521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 639","termid":"PBO:0057521"}


id: PBO:0072437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 1","termid":"PBO:0072437"}


id: FYPO:0000885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000885"}


id: PBO:0047427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc epsilon receptor Ig","termid":"PBO:0047427"}


id: GO:0016070
data:
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id: GO:0102562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-beta-L-arabinofuranose + a [protein]-trans-4-hydroxy-L-proline = UDP + H+ + a protein-O-(beta-L-arabinofuranose)-trans-4-hydroxy-L-proline.","definition_xrefs":["GOC:pz","EC:2.4.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"hydroxyproline O-arbinofuranose transferase activity","secondary_identifiers":["MetaCyc:RXN-15011","RHEA:49472"],"termid":"GO:0102562"}


id: PR:O74482
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coq11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.09","synonyms":[{"name":"Spom972h-coq11","type":"exact"}],"termid":"PR:O74482"}


id: PBO:0064655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA binding protein 1","termid":"PBO:0064655"}


id: GO:0044001
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of an organism from one place to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"migration in host","synonyms":[{"name":"migration within host","type":"exact"}],"termid":"GO:0044001"}


id: PR:Q9P7I6
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C24B10.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.20","synonyms":[{"name":"Spom972h-SPCC24B10.20","type":"exact"}],"termid":"PR:Q9P7I6"}


id: PBO:0108507
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cruciform-cutting endonuclease Cce1","termid":"PBO:0108507"}


id: GO:0160055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of at least GAP45 (gliding-associated protein), GAP50 and myosin heavy and light chains. Anchored via GAP50 to the inner membrane complex of motile and invasive forms of apicomplexan parasites and regulates parasite gliding motility and invasion of host cells.","definition_xrefs":["PMID:12139608","PMID:15123738","PMID:19577950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glideosome","termid":"GO:0160055"}


id: PBO:0058891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11181","termid":"PBO:0058891"}


id: PBO:0069166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 418, pseudogene","termid":"PBO:0069166"}


id: GO:0102355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-3-(5-oxofuran-2-ylidene)propanoate + H2O = 3-maleylpyruvate + H+.","definition_xrefs":["GOC:pz","EC:3.1.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-oxo-3-(5-oxofuran-2-ylidene)propanoate lactonase activity","secondary_identifiers":["RHEA:33967","MetaCyc:RXN-13371"],"termid":"GO:0102355"}


id: PBO:0042224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin T2","termid":"PBO:0042224"}


id: FYPO:0002002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has one or more nuclei and more than one septum, and the septa are grouped together between two compartments, one or more of which may contain one or multiple nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"multiseptate vegetative cell, septa grouped","synonyms":[{"name":"cytokinesis in the absence of nuclear division","type":"related"},{"name":"cytokinesis without nuclear division","type":"related"},{"name":"multiseptate cell, septa grouped, during vegetative growth","type":"exact"},{"name":"multiseptate vegetative cell, septa grouped during mitotic cell cycle","type":"related"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"},{"name":"vegetative cell with premature septation","type":"related"}],"termid":"FYPO:0002002"}


id: PBO:0069235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 490, pseudogene","termid":"PBO:0069235"}


id: PBO:0079584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 5","termid":"PBO:0079584"}


id: PBO:0003893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase complex subunit (predicted)","termid":"PBO:0003893"}


id: PBO:0049358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 16","termid":"PBO:0049358"}


id: PBO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transmembrane helices","termid":"PBO:0000073"}


id: PBO:0027761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_endocytosis_during_meiotic_cell_cycle","termid":"PBO:0027761"}


id: PBO:0047864
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(p16.2)","termid":"PBO:0047864"}


id: MOD:00459
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(13)C labeled succinyl group.","definition_xrefs":["PubMed:12175151","PubMed:11857757","Unimod:66#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(13)C labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4C13), N-term & K","type":"related"},{"name":"Succinyl:13C(4)","type":"related"}],"termid":"MOD:00459"}


id: PBO:0031577
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization","termid":"PBO:0031577"}


id: GO:0044547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA topoisomerase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"DNA topoisomerase binding","secondary_identifiers":["GO:0017033"],"synonyms":[{"name":"DNA topoisomerase I binding","type":"narrow"}],"termid":"GO:0044547"}


id: PR:Q02088
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 (Schizosaccharomyces pombe)","termid":"PR:000027986"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.02c","secondary_identifiers":["UniProtKB:Q02088"],"synonyms":[{"name":"Spom972h-cdc8","type":"exact"}],"termid":"PR:Q02088"}


id: PBO:0039408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 11","termid":"PBO:0039408"}


id: GO:1903765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion export across the plasma membrane.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF","GOC:rl","GO_REF:0000058","PMID:19646991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transport","termid":"GO:1901380"},{"relation_name":"is_a","term_name":"regulation of potassium ion export across plasma membrane","termid":"GO:1903764"},{"relation_name":"negatively_regulates","term_name":"potassium ion export across plasma membrane","termid":"GO:0097623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of potassium ion export across plasma membrane","secondary_identifiers":["GO:1902303"],"synonyms":[{"name":"down regulation of potassium export","type":"broad"},{"name":"down regulation of potassium ion export","type":"broad"},{"name":"down regulation of potassium ion export across plasma membrane","type":"exact"},{"name":"down-regulation of potassium export","type":"broad"},{"name":"down-regulation of potassium ion export","type":"broad"},{"name":"down-regulation of potassium ion export across plasma membrane","type":"exact"},{"name":"downregulation of potassium export","type":"broad"},{"name":"downregulation of potassium ion export","type":"broad"},{"name":"downregulation of potassium ion export across plasma membrane","type":"exact"},{"name":"inhibition of potassium export","type":"narrow"},{"name":"inhibition of potassium ion export","type":"related"},{"name":"inhibition of potassium ion export across plasma membrane","type":"exact"},{"name":"negative regulation of potassium export","type":"broad"},{"name":"negative regulation of potassium ion export","type":"broad"}],"termid":"GO:1903765"}


id: GO:0070387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A procollagen-proline 4-dioxygenase complex that contains alpha subunits of the type II isoform; its activity is inhibited by poly(L-proline) only at high concentrations.","definition_xrefs":["PMID:7753822","PMID:14500733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline 4-dioxygenase complex","termid":"GO:0016222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase complex, alpha(II) type","synonyms":[{"name":"procollagen-proline, 2-oxoglutarate-4-dioxygenase complex, alpha(II) type","type":"exact"},{"name":"prolyl 4-hydroxylase complex (alpha(II)-type)","type":"broad"}],"termid":"GO:0070387"}


id: PBO:0086897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family; YFL040W is not an essential gene; may have a role in intracellular sterol transport","termid":"PBO:0086897"}


id: PBO:0071871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 9","termid":"PBO:0071871"}


id: PBO:0068212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 519","termid":"PBO:0068212"}


id: PBO:0109658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane fission complex receptor Fis1","termid":"PBO:0109658"}


id: PBO:0059492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1 like (pseudogene)","termid":"PBO:0059492"}


id: GO:0060576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell of the intestine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"},{"relation_name":"part_of","term_name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell development","termid":"GO:0060576"}


id: GO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nucleolar RNA (snoRNA) from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"sno(s)RNA transcription","termid":"GO:0009302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"snoRNA transcription by RNA polymerase II","synonyms":[{"name":"snoRNA transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001015"}


id: PBO:0073417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET like protein","termid":"PBO:0073417"}


id: PATO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000191 learning_and memory (obsolete PATO:0000191)","termid":"PATO:0000191"}


id: GO:0017134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fibroblast growth factor.","definition_xrefs":["PMID:9806903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"fibroblast growth factor binding","secondary_identifiers":["GO:0048606","GO:0048607","GO:0048603","GO:0048602","GO:0048604","GO:0048605"],"synonyms":[{"name":"FGF 1 binding","type":"narrow"},{"name":"FGF 2 binding","type":"narrow"},{"name":"FGF 3 binding","type":"narrow"},{"name":"FGF 4 binding","type":"narrow"},{"name":"FGF 5 binding","type":"narrow"},{"name":"FGF 6 binding","type":"narrow"},{"name":"FGF binding","type":"exact"},{"name":"fibroblast growth factor 1 binding","type":"narrow"},{"name":"fibroblast growth factor 2 binding","type":"narrow"},{"name":"fibroblast growth factor 3 binding","type":"narrow"},{"name":"fibroblast growth factor 4 binding","type":"narrow"},{"name":"fibroblast growth factor 5 binding","type":"narrow"},{"name":"fibroblast growth factor 6 binding","type":"narrow"}],"termid":"GO:0017134"}


id: PR:O74918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11097:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.08","secondary_identifiers":["UniProtKB:O74918"],"synonyms":[{"name":"SPCC757.08","type":"related"},{"name":"Spom972h-EXOSC9","type":"exact"},{"name":"ribosomal RNA-processing protein 45 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74918"}


id: GO:0010272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silver ion stimulus.","definition_xrefs":["PMID:16367966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to silver ion","termid":"GO:0010272"}


id: PBO:0045097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 2","termid":"PBO:0045097"}


id: PBO:0059232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L3","termid":"PBO:0059232"}


id: GO:0051358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the non-fluorescent protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a glutamic acid, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. This modification is found in the GFP-like non-fluorescent red chromoprotein from the sea anemone Radianthus macrodactylus.","definition_xrefs":["PMID:11682051","RESID:AA0378"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-glutamic acid 5-imidazolinone glycine (obsolete GO:0051358)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051358"}


id: PBO:0065523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 3","termid":"PBO:0065523"}


id: GO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of trinitrotoluene, a methylated benzene molecule with three NO2 groups attached to it.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete trinitrotoluene biosynthetic process (obsolete GO:0046259)","synonyms":[{"name":"trinitrotoluene anabolism","type":"exact"},{"name":"trinitrotoluene biosynthesis","type":"exact"},{"name":"trinitrotoluene biosynthetic process","type":"exact"},{"name":"trinitrotoluene formation","type":"exact"},{"name":"trinitrotoluene synthesis","type":"exact"}],"termid":"GO:0046259"}


id: GO:0004590
data:
  {"annotated_genes":["SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73614],"is_not":false,"summary":null,"term":"GO:0004590"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + orotidine 5'-phosphate = CO2 + UMP.","definition_xrefs":["RHEA:11596","EC:4.1.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"orotidine-5'-phosphate decarboxylase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-73564","KEGG_REACTION:R00965","MetaCyc:OROTPDECARB-RXN"],"synonyms":[{"name":"ODCase activity","type":"related"},{"name":"OMP decarboxylase activity","type":"related"},{"name":"OMP-DC","type":"related"},{"name":"OMPdcase activity","type":"related"},{"name":"UMP synthase activity","type":"related"},{"name":"orotate decarboxylase activity","type":"related"},{"name":"orotate monophosphate decarboxylase activity","type":"related"},{"name":"orotic decarboxylase activity","type":"related"},{"name":"orotidine 5'-phosphate decarboxylase activity","type":"related"},{"name":"orotidine monophosphate decarboxylase activity","type":"related"},{"name":"orotidine phosphate decarboxylase activity","type":"related"},{"name":"orotidine-5'-monophosphate decarboxylase activity","type":"related"},{"name":"orotidine-5'-phosphate carboxy-lyase (UMP-forming)","type":"related"},{"name":"orotidine-5'-phosphate carboxy-lyase activity","type":"related"},{"name":"orotidylic acid decarboxylase activity","type":"related"},{"name":"orotidylic decarboxylase activity","type":"related"},{"name":"orotodylate decarboxylase activity","type":"related"},{"name":"uridine 5'-monophosphate synthase activity","type":"related"}],"termid":"GO:0004590","terms_by_termid":{"GO:0004590":null}}


id: PBO:0066022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 3","termid":"PBO:0066022"}


id: GO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an adenylyl group (adenosine 5'-monophosphate; AMP) from a protein amino acid.","definition_xrefs":["PMID:21734656","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein denucleotidylation","termid":"GO:0044601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deadenylylation","synonyms":[{"name":"protein deAMPylation","type":"exact"}],"termid":"GO:0044602"}


id: FYPO:0004225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of nucleosome binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abnormal nucleosome binding","termid":"FYPO:0004225"}


id: GO:0090075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of muscle contraction is reduced. Muscle relaxation can involve a number of processes including the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases. In some muscles, calcium-independent pathways also play a role in muscle relaxation by decreasing the phosphorylation state of myosin light chain.","definition_xrefs":["GOC:rl","PMID:19996365","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of muscle","termid":"GO:0090075"}


id: PBO:0074804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13I","termid":"PBO:0074804"}


id: PBO:0076023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 19","termid":"PBO:0076023"}


id: GO:1905578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERBB3 signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27353365","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"regulates","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERBB3 signaling pathway","synonyms":[{"name":"regulation of ERBB3 signalling pathway","type":"exact"},{"name":"regulation of HER3 signaling pathway","type":"exact"},{"name":"regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:1905578"}


id: GO:0032033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin II complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin II binding","termid":"GO:0045159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"myosin II light chain binding","termid":"GO:0032033"}


id: PBO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroglobin","termid":"PBO:0060976"}


id: GO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0007128","GO:0008150"],"is_obsolete":false,"name":"pachytene","secondary_identifiers":["Wikipedia:Meiosis#Pachytene","Wikipedia:Pachytene"],"termid":"GO:0000239"}


id: PBO:0091380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CHCH domain protein Mix17","termid":"PBO:0091380"}


id: GO:1901189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ephrin receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ephrin receptor signaling pathway","termid":"GO:1901187"},{"relation_name":"positively_regulates","term_name":"ephrin receptor signaling pathway","termid":"GO:0048013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ephrin receptor signaling pathway","synonyms":[{"name":"activation of Eph receptor signaling pathway","type":"exact"},{"name":"activation of Eph receptor signalling pathway","type":"exact"},{"name":"activation of ephrin receptor signaling pathway","type":"narrow"},{"name":"positive regulation of Eph receptor signaling pathway","type":"exact"},{"name":"positive regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up regulation of Eph receptor signaling pathway","type":"exact"},{"name":"up regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up regulation of ephrin receptor signaling pathway","type":"exact"},{"name":"up-regulation of Eph receptor signaling pathway","type":"exact"},{"name":"up-regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up-regulation of ephrin receptor signaling pathway","type":"exact"},{"name":"upregulation of Eph receptor signaling pathway","type":"exact"},{"name":"upregulation of Eph receptor signalling pathway","type":"exact"},{"name":"upregulation of ephrin receptor signaling pathway","type":"exact"}],"termid":"GO:1901189"}


id: GO:0110115
data:
  {"annotated_genes":["SJAG_01456","SJAG_04486","SJAG_03602","SJAG_04280"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93983,94542,98927,111190],"is_not":false,"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A megadalton-sized complex at the medial cortex organized as an oligomeric core of SAD family protein kinases involved in cell size-dependent localization and phosphorylation of Wee1 during interphase.","definition_xrefs":["GOC:vw","PMID:29514920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"},{"relation_name":"part_of","term_name":"medial cortical node","termid":"GO:0071341"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01456":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"Cdr2 medial cortical node complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"interphase cortical node","type":"exact"},{"name":"interphase node","type":"exact"}],"termid":"GO:0110115","terms_by_termid":{"GO:0110115":null}}


id: PBO:0017993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor transmembrane transporter Mam1","termid":"PBO:0017993"}


id: PBO:0091428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt3","termid":"PBO:0091428"}


id: PBO:0081268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B pseudogene 1","termid":"PBO:0081268"}


id: PBO:0051869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL1 divergent transcript","termid":"PBO:0051869"}


id: PBO:0065002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 8","termid":"PBO:0065002"}


id: GO:0035539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-7,8-dihydrodeoxyguanosine-triphosphate (8-oxo-dGTP) + H2O = 8-oxo-7,8-dihydrodeoxyguanosine phosphate (8-oxo-dGMP) + diphosphate. 8-oxo-dGTP is the oxidised form of the free guanine nucleotide and can act as a potent mutagenic substrate for DNA synthesis causing transversion mutations. 8-oxo-dGTPase hydrolyses 8-oxo-dGTP to its monophosphate form to prevent the misincorporation of 8-oxo-dGTP into cellular DNA.","definition_xrefs":["PMID:7782328","PMID:7859359","RHEA:31575","PMID:17804481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0047429","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity","secondary_identifiers":["Reactome:R-HSA-2395869","Reactome:R-HSA-2395849","EC:3.6.1.55","Reactome:R-HSA-9750555"],"synonyms":[{"name":"8-oxo-7,8-dihydro-2'-deoxyguanosine 5'-triphosphate pyrophosphohydrolase activity","type":"exact"},{"name":"8-oxo-7,8-dihydro-deoxyguanosine triphosphate pyrophosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydrodeoxyguanosine triphosphatase activity","type":"exact"},{"name":"8-oxo-dGTP pyrophosphohydrolase activity","type":"exact"},{"name":"8-oxo-dGTPase activity","type":"exact"}],"termid":"GO:0035539"}


id: GO:0006059
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"hexitol metabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"hexitol metabolism","type":"exact"},{"name":"sugar alcohol (hexitol) metabolic process","type":"exact"},{"name":"sugar alcohol (hexitol) metabolism","type":"exact"}],"termid":"GO:0006059","terms_by_termid":{"GO:0006062":null}}


id: GO:0120127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of zinc ion.","definition_xrefs":["PMID:24024381","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to zinc ion starvation","termid":"GO:0120127"}


id: PBO:0087485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); a complex required for loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during DSB repair via histone H2AX; promotes gene expression program that supports translational fidelity; evolutionarily-conserved adherin; relocalizes to cytosol in response to hypoxia; human disorder Cornelia de Lange syndrome is caused by mutations in NIPBL, the human ortholog of SCC2; conserved role in NHEJ","termid":"PBO:0087485"}


id: PBO:0056425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis regulator and mRNA stability factor 1","termid":"PBO:0056425"}


id: PBO:0045075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP2 antisense RNA 1","termid":"PBO:0045075"}


id: FYPO:0006227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the plasma membrane potential, i.e. the electric potential existing across the plasma membrane, is abnormal.","definition_xrefs":["PomBase:mah","PMID:16164595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal plasma membrane potential","synonyms":[{"name":"abnormal plasma membrane polarization","type":"exact"},{"name":"abnormal plasma membrane potential during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006227"}


id: GO:0016318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which photoreceptors are arranged in ommatidia in the dorsal and ventral fields to be mirror images. The polarity is established in the imaginal discs concurrently with cell fate specification.","definition_xrefs":["PMID:10725247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"ommatidial rotation","termid":"GO:0016318"}


id: FYPO:0000200
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114434,114266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the mitotic metaphase to anaphase transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abnormal regulation of metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal regulation of mitotic metaphase/anaphase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000200","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0066892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 192","termid":"PBO:0066892"}


id: PBO:0076722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichoplein keratin filament binding","termid":"PBO:0076722"}


id: GO:0061705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, to yield fructose-6-phosphate through both glucose and fructose intermediates.","definition_xrefs":["PMID:15012287","GOC:dph","MetaCyc:PWY-621","GOC:glycolysis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate through glucose and fructose","termid":"GO:0061705"}


id: PBO:0068135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 442","termid":"PBO:0068135"}


id: PBO:0028229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_trehalose_level_during_cellular_response_to_salt_stress","termid":"PBO:0028229"}


id: PBO:0029357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_dTTP_level","termid":"PBO:0029357"}


id: FYPO:0006969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cytidine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular cytidine level","synonyms":[{"name":"decreased cellular cytidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular cytidine level during vegetative growth","type":"exact"},{"name":"reduced cellular cytidine level","type":"exact"}],"termid":"FYPO:0006969"}


id: RO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulated_by","termid":"RO:0002022"}


id: GO:0005483
data:
  {"annotated_genes":["SJAG_04909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75596],"is_not":false,"summary":null,"term":"GO:0005483"}]},"cv_name":"molecular_function","definition":"Binding to both N-ethylmaleimide-sensitive fusion protein (NSF) and a cis-SNARE complex (i.e. a SNARE complex in which all proteins are associated with the same membrane) and increasing the ATPase activity of NSF, thereby allowing ATP hydrolysis by NSF to disassemble the cis-SNARE complex.","definition_xrefs":["GOC:mah","PMID:14570579","PMID:15556857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"soluble NSF attachment protein activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"SNAP","type":"exact"}],"termid":"GO:0005483","terms_by_termid":{"GO:0005483":null}}


id: PBO:0034795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChAPs family protein bch1","termid":"PBO:0034795"}


id: GO:0005873
data:
  {"annotated_genes":["SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99346,103611],"is_not":false,"summary":null,"term":"GO:0005873"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily and any associated proteins, and moves towards the plus end of a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"plus-end kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005873","terms_by_termid":{"GO:0005873":null}}


id: PBO:0029323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA_during_mitotic_S_phase","termid":"PBO:0029323"}


id: PATO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased occurrence","synonyms":[{"name":"decreased incidence","type":"exact"}],"termid":"PATO:0002052"}


id: PBO:0036382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl3, DIPSY family","termid":"PBO:0036382"}


id: PBO:0061602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBP iron-sulfur cluster assembly factor, mitochondrial","termid":"PBO:0061602"}


id: GO:0019638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"6-hydroxycineole metabolic process","synonyms":[{"name":"6-endo-hydroxycineole metabolic process","type":"exact"},{"name":"6-endo-hydroxycineole metabolism","type":"exact"},{"name":"6-hydroxycineole metabolism","type":"exact"},{"name":"hydroxycineol metabolic process","type":"exact"},{"name":"hydroxycineol metabolism","type":"exact"}],"termid":"GO:0019638"}


id: PBO:0075577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin interactor and repressor of chromatin binding","termid":"PBO:0075577"}


id: PBO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 2","termid":"PBO:0044228"}


id: GO:0047980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzoylglycine + H2O = benzoate + glycine.","definition_xrefs":["EC:3.5.1.32","RHEA:10424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hippurate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R01424","MetaCyc:HIPPURATE-HYDROLASE-RXN"],"synonyms":[{"name":"N-benzoylamino-acid amidohydrolase activity","type":"related"},{"name":"benzoylglycine amidohydrolase activity","type":"related"},{"name":"hippuricase activity","type":"related"}],"termid":"GO:0047980"}


id: SO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. Transfer RNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNA's corresponding amino acid is attached (by aminoacyl-tRNA synthetases). Transfer RNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tRNA_primary_transcript","termid":"SO:0000210"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/TRNA"],"synonyms":[{"name":"INSDC_feature:tRNA","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"broad"},{"name":"transfer RNA","type":"related"},{"name":"transfer ribonucleic acid","type":"related"}],"termid":"SO:0000253"}


id: RO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between two linear structures that are approximately parallel to each other for their entire length and where either the two structures are adjacent to each other or one is part of the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coincident_with","termid":"RO:0002008"}


id: GO:0052683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (Z)-gamma-bisabolene + diphosphate.","definition_xrefs":["RHEA:26081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(Z)-gamma-bisabolene synthase activity","secondary_identifiers":["EC:4.2.3.40","MetaCyc:RXN-10005"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(Z)-gamma-bisabolene-forming] activity","type":"exact"}],"termid":"GO:0052683"}


id: GO:0099557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, mediated by transynaptic protein complexes, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["PMID:19029886","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission","termid":"GO:0099557"}


id: PBO:0030994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_osmotic_stress","termid":"PBO:0030994"}


id: GO:0140301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interactions (or cell to cell communication) that occur between the pollen grain (male gametophyte) and the stigmatic tissues of the female sporophyte after the pollen reaches the stigmatic papillae.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-stigma interaction","termid":"GO:0140301"}


id: PBO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBB receptor feedback inhibitor 1","termid":"PBO:0046532"}


id: GO:1901797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of signal transduction by p53 class mediator","synonyms":[{"name":"down regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of signal transduction by p53 class mediator","type":"exact"},{"name":"inhibition of signal transduction by p53 class mediator","type":"narrow"}],"termid":"GO:1901797"}


id: GO:1901844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["PMID:17130302","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"}


id: PBO:0059622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 3","termid":"PBO:0059622"}


id: PBO:0088023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; interacts with the branchpoint-binding protein during the formation of the second commitment complex","termid":"PBO:0088023"}


id: FYPO:0002721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration than normal of one or more enzymes that degrades cell wall polysaccharides by hydrolyzing alpha-glucan linkages.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to cell wall-degrading enzymes","termid":"FYPO:0001882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to alpha-glucanase","synonyms":[{"name":"resistance to alpha-glucanase during mitotic cell cycle","type":"related"},{"name":"resistance to alpha-glucanase during vegetative growth","type":"exact"},{"name":"resistant to alpha-glucanase","type":"exact"}],"termid":"FYPO:0002721"}


id: PBO:0061175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 5-1","termid":"PBO:0061175"}


id: PBO:0058679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6807","termid":"PBO:0058679"}


id: PBO:0108955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA5 pseudogene 1","termid":"PBO:0108955"}


id: PR:O59729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.09 gene.","definition_xrefs":["UniProtKB:O59729","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein slp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.09","synonyms":[{"name":"SUN-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC3E7.09","type":"exact"}],"termid":"PR:O59729"}


id: PBO:0062977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein nuclear 1","termid":"PBO:0062977"}


id: PBO:0078624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 73","termid":"PBO:0078624"}


id: PBO:0054998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2413","termid":"PBO:0054998"}


id: GO:0062140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin collar in pathogenic fungi involved in the constriction of hyphae at the plant plasmodesma enabling penetration of an adjacent cell.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin collar","termid":"GO:0032173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphae septin collar","synonyms":[{"name":"septin collar of invasive hyphae","type":"related"}],"termid":"GO:0062140"}


id: MOD:00457
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a succinyl group.","definition_xrefs":["PubMed:11857757","Unimod:64#N-term","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent light form (N-term)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:00457"}


id: GO:0120246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["GOC:krc","DOI:10.1007/978-1-4615-4913-0_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound metabolic process","synonyms":[{"name":"alkyne substituted compound metabolic process","type":"exact"},{"name":"alkyne substituted compound metabolism","type":"exact"}],"termid":"GO:0120246"}


id: PBO:0067289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 372, pseudogene","termid":"PBO:0067289"}


id: PBO:0076708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF7L1 intronic transcript 1","termid":"PBO:0076708"}


id: PBO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendritic cell associated nuclear protein 1","termid":"PBO:0044617"}


id: PBO:0071629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 48","termid":"PBO:0071629"}


id: GO:0060958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an endocardial cell over time, from its formation to the mature cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell development","termid":"GO:0001885"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"endocardial cell differentiation","termid":"GO:0060956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell development","termid":"GO:0060958"}


id: GO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + ATP = N(4)-phosphoagmatine + ADP + 3 H+.","definition_xrefs":["RHEA:15953","EC:2.7.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"agmatine kinase activity","secondary_identifiers":["KEGG_REACTION:R01417","MetaCyc:AGMATINE-KINASE-RXN"],"synonyms":[{"name":"ATP:agmatine 4-N-phosphotransferase activity","type":"related"},{"name":"ATP:agmatine N4-phosphotransferase activity","type":"related"},{"name":"phosphagen phosphokinase activity","type":"related"}],"termid":"GO:0047633"}


id: PBO:0058091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4307 host gene","termid":"PBO:0058091"}


id: GO:0043494
data:
  {"annotated_genes":["SJAG_04574","SJAG_00341","SJAG_01540","SJAG_00756","SJAG_03680","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89971,92309,105792,109231,112819,113888],"is_not":false,"summary":null,"term":"GO:0043494"}]},"cv_name":"cellular_component","definition":"An cullin-dependent E3 ubiquitin ligase/histone H3-K9 methyltransferase complex essential for heterochromatin assembly by RNAi.","definition_xrefs":["PMID:16127433","GOC:vw","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"},{"relation_name":"is_a","term_name":"Cul4-RING E3 ubiquitin ligase complex","termid":"GO:0080008"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_03680":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CLRC complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CLRC ubiquitin ligase complex","type":"exact"},{"name":"Clr4-Rik1-Cul4 complex","type":"exact"},{"name":"Rik1 E3 ubiquitin ligase complex","type":"exact"},{"name":"Rik1-E3 ubiquitin ligase complex","type":"exact"}],"termid":"GO:0043494","terms_by_termid":{"GO:0043494":null}}


id: PBO:0043835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 7","termid":"PBO:0043835"}


id: PBO:0069025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 270, pseudogene","termid":"PBO:0069025"}


id: PBO:0044250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC22 spliceosome associated protein homolog","termid":"PBO:0044250"}


id: GO:0042468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell or organism in response to a stimulus in which the frequency or magnitude of turning behavior is altered.","definition_xrefs":["PMID:2790068","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesis","termid":"GO:0042465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"klinokinesis","termid":"GO:0042468"}


id: MOD:00554
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 202 was merged with entry 195, remap to MOD:00548. modification from Unimod Chemical derivative","definition_xrefs":["Unimod:202"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00554 APTA-d0 with no neutral loss (obsolete MOD:00554)","termid":"MOD:00554"}


id: GO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that plays a role in determining cell polarity by directing the localized assembly of actin filaments at polarization sites; in Saccharomyces the polarisome includes Bni1p, Spa2p, Pea2p, and Bud6p.","definition_xrefs":["PMID:14998522","PMID:14734532","PMID:9632790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"part_of","term_name":"site of polarized growth","termid":"GO:0030427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938","GO:0032991"],"is_obsolete":false,"name":"polarisome","termid":"GO:0000133"}


id: GO:0140952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl27-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me2.","definition_xrefs":["RHEA:64452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"histone H3K27 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.371"],"synonyms":[{"name":"histone H3K27 dimethylation","type":"broad"},{"name":"histone H3-K27 dimethylase activity","type":"exact"},{"name":"histone H3-K27 dimethylation","type":"broad"},{"name":"histone H3K27 dimethylase activity","type":"exact"},{"name":"histone H3K27 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140952"}


id: PBO:0011985
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and names Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1 (supported by PSIblast/ Treefam). The real Dpb3 appears to be the newly identified SPCC16C4.22 see Treefam:TF103009","termid":"PBO:0011985"}


id: PR:Q9P7W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase RIO2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10593:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase rio2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.05","secondary_identifiers":["UniProtKB:Q9P7W5"],"synonyms":[{"name":"SPBC1703.05","type":"related"},{"name":"Spom972h-RIOK2","type":"exact"}],"termid":"PR:Q9P7W5"}


id: GO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + (4S)-limonene-1,2-epoxide.","definition_xrefs":["MetaCyc:RXN-9409","PMID:8820855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-limonene 1,2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R09389","EC:1.14.13.107","KEGG_REACTION:R09385"],"synonyms":[{"name":"(-)-limonene 1,2-monooxygenase activity","type":"related"},{"name":"(-)-limonene,NAD(P)H:oxygen oxidoreductase activity","type":"related"},{"name":"(S)-limonene,NAD(P)H:oxygen oxidoreductase activity","type":"exact"}],"termid":"GO:0052601"}


id: GO:0051594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a glucose stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hexose stimulus","termid":"GO:0009732"},{"relation_name":"is_a","term_name":"response to glucose","termid":"GO:0009749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of glucose","synonyms":[{"name":"glucose detection","type":"exact"},{"name":"glucose perception","type":"related"},{"name":"glucose sensing","type":"related"}],"termid":"GO:0051594"}


id: GO:0052487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052487)","synonyms":[{"name":"negative regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont JA-mediated defense response","type":"exact"}],"termid":"GO:0052487"}


id: GO:0000479
data:
  {"annotated_genes":["SJAG_02250","SJAG_00344","SJAG_04174","SJAG_00965","SJAG_01476","SJAG_00955","SJAG_02275","SJAG_02547","SJAG_03846","SJAG_04224","SJAG_00897","SJAG_03234","SJAG_02553","SJAG_06613","SJAG_00772","SJAG_04524","SJAG_01551","SJAG_01623","SJAG_04582","SJAG_02374","SJAG_04916","SJAG_03789","SJAG_03425","SJAG_01581","SJAG_03952","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73868,75136,75938],"is_not":false,"summary":null,"term":"GO:0000479"},{"annotations":[87364,90565,99567,71484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000448"},{"annotations":[70606,76919,72793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[110506,70604,74108,98574,71932,92375,110586,108733,113684,104353,100201,101067,71284,101066,90328,72791,92084,99991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[74109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[70605,76918,104354,72792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0000479","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000461":null,"GO:0000472":null,"GO:0000479":null,"GO:0000480":null}}


id: PBO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.42","termid":"PBO:0003190"}


id: PBO:0068616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 68, pseudogene","termid":"PBO:0068616"}


id: GO:0080026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an indolebutyric acid stimulus.","definition_xrefs":["PMID:18725356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to auxin","termid":"GO:0009733"},{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to indolebutyric acid","synonyms":[{"name":"response to IBA stimulus","type":"exact"},{"name":"response to indole-3-butyric acid stimulus","type":"narrow"},{"name":"response to indolebutyric acid stimulus","type":"exact"}],"termid":"GO:0080026"}


id: PBO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.6","termid":"PBO:0000445"}


id: PBO:0038736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 8","termid":"PBO:0038736"}


id: PBO:0052343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF1C antisense RNA 1","termid":"PBO:0052343"}


id: PBO:0081475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 350","termid":"PBO:0081475"}


id: PBO:0069218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 473, pseudogene","termid":"PBO:0069218"}


id: PBO:0071667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 8","termid":"PBO:0071667"}


id: GO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that affects platelet aggregation in another organism. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["PMID:15922770","GOC:fj","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation of blood coagulation in another organism","termid":"GO:0035806"},{"relation_name":"is_a","term_name":"regulation of platelet aggregation","termid":"GO:0090330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"perturbation of platelet aggregation in another organism","synonyms":[{"name":"modulation by organism of platelet aggregation in other organism","type":"exact"},{"name":"modulation of platelet aggregation in another organism","type":"exact"},{"name":"modulation of platelet aggregation in other organism","type":"exact"},{"name":"regulation of platelet aggregation in other organism","type":"related"}],"termid":"GO:0035892"}


id: PBO:0090506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3020 family conserved fungal protein Spp41","termid":"PBO:0090506"}


id: GO:0021525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of lateral motor column neurons. Lateral motor column neurons are generated only on limb levels and send axons into the limb mesenchyme. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","GO_REF:0000021","PMID:11262869","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron differentiation","termid":"GO:0021525"}


id: GO:1905327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the tracheoesophageal septum. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:TermGenie","PMID:9731532","GO_REF:0000081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheoesophageal septum formation","synonyms":[{"name":"esophagotracheal septum formation","type":"exact"},{"name":"tracheoesophageal ridges formation","type":"related"}],"termid":"GO:1905327"}


id: GO:0008720
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78812],"is_not":false,"summary":null,"term":"GO:0008720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + NAD+ = H+ + NADH + pyruvate.","definition_xrefs":["EC:1.1.1.28","RHEA:16369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-lactate dehydrogenase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R00704","MetaCyc:DLACTDEHYDROGNAD-RXN"],"synonyms":[{"name":"D-lactic acid dehydrogenase activity","type":"related"},{"name":"D-lactic dehydrogenase activity","type":"related"}],"termid":"GO:0008720","terms_by_termid":{"GO:0008720":null}}


id: GO:0034803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-naphthoate + O2 = (3E)-3-[(6Z)-6-(carboxymethylene)cyclohexa-2,4-dien-1-ylidene]-2-oxopropanate.","definition_xrefs":["UM-BBD_reactionID:r1104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-naphthoate 2,3-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034803"}


id: MOD:00371
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-aspartic acid residues, three L-glutamic acid residues, an L-histidine residue, and a one-calcium, four-iron, four-oxygen cluster to bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide.","definition_xrefs":["RESID:AA0366","PubMed:14764885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese containing modified residue","termid":"MOD:00740"},{"relation_name":"is_a","term_name":"calcium containing modified residue","termid":"MOD:01482"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide","synonyms":[{"name":"4Mn-Ca-4O cluster","type":"exact"},{"name":"bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide","type":"exact"},{"name":"mu3-1:2:3kappaO-oxido-mu3-1:3:4kappaO-oxido-mu3-2:3:4kappaO-oxido-mu4-1:2:4:5kappaO-oxido-N1'-histidino-O5-glutamato 2-manganese-O5,O5-glutamato 3-manganese-O4-aspartato 4-manganese-O4-aspartato-O5-glutamato 5-manganese","type":"exact"},{"name":"photosystem II catalytic cluster","type":"exact"}],"termid":"MOD:00371"}


id: MOD:00876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosamine sugar group through a glycosidic bond.","definition_xrefs":["Unimod:454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminylated residue","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"},{"name":"Hexosamines (GalN, GlcN)","type":"exact"}],"termid":"MOD:00876"}


id: GO:0015626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-diaminopimelate from one side of a membrane to the other. L-diaminopimelate is the L-enantiomer anion of 2,6-diaminoheptanedioic acid.","definition_xrefs":["ISBN:0815340729","GOC:jsg","GOC:mah","ISBN:0198506732","GOC:mtg_transport","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-diaminopimelate transmembrane transporter activity","synonyms":[{"name":"L-diaminopimelate transporter activity","type":"broad"},{"name":"cystine/diaminopimelate porter activity","type":"narrow"}],"termid":"GO:0015626"}


id: SO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Bacterial Artificial Chromosome, a cloning vector that can be propagated as mini-chromosomes in a bacterial host.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC","synonyms":[{"name":"bacterial artificial chromosome","type":"exact"}],"termid":"SO:0000153"}


id: GO:0005875
data:
  {"annotated_genes":["SJAG_02561","SJAG_01613","SJAG_00140","SJAG_04841","SJAG_00113","SJAG_01370","SJAG_00773","SJAG_01546","SJAG_01837","SJAG_02336","SJAG_01297","SJAG_00930","SJAG_00697","SJAG_04745","SJAG_05185","SJAG_02807","SJAG_01662","SJAG_00397","SJAG_02286","SJAG_01739","SJAG_00332","SJAG_03673","SJAG_04412"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90380,92852],"is_not":false,"summary":null,"term":"GO:0005875"},{"annotations":[113771,104551,107168,111833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032133"},{"annotations":[83557,86681,93138,78351,76363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005868"},{"annotations":[78930,90806,98420,106340,109196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005869"},{"annotations":[73513,75294,84713,92345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005871"},{"annotations":[103603,99338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016938"},{"annotations":[94752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005872"},{"annotations":[103611,99346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005873"}]},"cv_name":"cellular_component","definition":"Any multimeric complex connected to a microtubule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00397":null,"SJAG_00697":null,"SJAG_00773":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01739":null,"SJAG_01837":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02561":null,"SJAG_02807":null,"SJAG_03673":null,"SJAG_04412":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"microtubule associated complex","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0005875","terms_by_termid":{"GO:0005868":null,"GO:0005869":null,"GO:0005871":null,"GO:0005872":null,"GO:0005873":null,"GO:0005875":null,"GO:0016938":null,"GO:0032133":null}}


id: GO:0004248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage where P1', P2' and P3' are hydrophobic residues.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 1 activity (obsolete GO:0004248)","synonyms":[{"name":"MMP-3","type":"exact"},{"name":"collagen-activating protein","type":"related"},{"name":"collagenase activating protein","type":"related"},{"name":"matrix metalloproteinase 3 activity","type":"related"},{"name":"neutral proteoglycanase activity","type":"related"},{"name":"procollagenase activator","type":"related"},{"name":"proteoglycanase activity","type":"related"},{"name":"stromelysin","type":"related"},{"name":"stromelysin 1 activity","type":"exact"},{"name":"transin activity","type":"related"}],"termid":"GO:0004248"}


id: GO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of dendritic cells such that the total number of dendritic cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:12570827","CL:0000451","GOC:uh","PMID:19176316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell homeostasis","synonyms":[{"name":"DC homeostasis","type":"related"}],"termid":"GO:0036145"}


id: GO:0106362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = H+ + N(omega)-(N-acetyl-beta-D-glucosaminyl)-L-arginyl-[protein] + UDP.","definition_xrefs":["GOC:sp","PMID:30619781","RHEA:66632","PMID:23955153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-acetylglucosaminyltransferase activity","termid":"GO:0016262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0140096","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-arginine N-acetylglucosaminyltransferase activity","termid":"GO:0106362"}


id: PBO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AlkylTransferase-Like","termid":"PBO:0034748"}


id: PBO:0002649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp3","termid":"PBO:0002649"}


id: PBO:0079312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 6","termid":"PBO:0079312"}


id: GO:1905062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardioblast proliferation.","definition_xrefs":["PMID:24236097","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast proliferation","termid":"GO:0003264"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"},{"relation_name":"positively_regulates","term_name":"cardioblast proliferation","termid":"GO:0003263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardioblast proliferation","synonyms":[{"name":"activation of cardioblast proliferation","type":"narrow"},{"name":"up regulation of cardioblast proliferation","type":"exact"},{"name":"up-regulation of cardioblast proliferation","type":"exact"},{"name":"upregulation of cardioblast proliferation","type":"exact"}],"termid":"GO:1905062"}


id: GO:1900268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reverse transcription.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"reverse transcription","termid":"GO:0001171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of reverse transcription","termid":"GO:1900268"}


id: PBO:0071186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 27","termid":"PBO:0071186"}


id: PBO:0030392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monoseptate","termid":"PBO:0030392"}


id: GO:0004697
data:
  {"annotated_genes":["SJAG_00610","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98312],"is_not":false,"summary":null,"term":"GO:0004697"},{"annotations":[86480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004699"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction requires diacylglycerol.","definition_xrefs":["EC:2.7.11.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0140096","GO:0016740","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol-dependent serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5623667","GO:0004701","Reactome:R-HSA-74615","Reactome:R-HSA-5218823","Reactome:R-HSA-193703","Reactome:R-HSA-2179413","Reactome:R-HSA-450550","Reactome:R-HSA-374664","Reactome:R-HSA-429698","Reactome:R-HSA-5229194","Reactome:R-HSA-8934446","Reactome:R-HSA-1433508","Reactome:R-HSA-198314","Reactome:R-HSA-5218805","Reactome:R-HSA-450533","Reactome:R-HSA-5625784","Reactome:R-HSA-8932284","Reactome:R-HSA-9010681","Reactome:R-HSA-9021357","Reactome:R-HSA-927889","Reactome:R-HSA-9632858","Reactome:R-HSA-9626817","Reactome:R-HSA-909552","Reactome:R-HSA-9796053","Reactome:R-HSA-2730863","Reactome:R-HSA-5138432","Reactome:R-HSA-5671749","Reactome:R-HSA-751040"],"synonyms":[{"name":"ATP:protein phosphotransferase (diacylglycerol-dependent) activity","type":"related"},{"name":"PKC","type":"related"},{"name":"PKC activity","type":"exact"},{"name":"PKCalpha","type":"related"},{"name":"PKCbeta","type":"related"},{"name":"PKCdelta","type":"related"},{"name":"PKCepsilon","type":"related"},{"name":"PKCgamma","type":"related"},{"name":"Pkc1p","type":"related"},{"name":"STK24","type":"related"},{"name":"cPKC","type":"related"},{"name":"cPKCalpha","type":"related"},{"name":"cPKCbeta","type":"related"},{"name":"cPKCgamma","type":"related"},{"name":"diacylglycerol-activated phospholipid-dependent PKC activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent protein kinase C activity","type":"exact"},{"name":"nPKC","type":"related"},{"name":"nPKCdelta","type":"related"},{"name":"nPKCepsilon","type":"related"},{"name":"nPKCeta","type":"related"},{"name":"nPKCtheta","type":"related"},{"name":"protein kinase Cepsilon activity","type":"narrow"}],"termid":"GO:0004697","terms_by_termid":{"GO:0004697":null,"GO:0004699":null}}


id: GO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"},{"relation_name":"is_a","term_name":"O-decanoyltransferase activity","termid":"GO:0034325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alcohol O-decanoyltransferase activity","termid":"GO:0034322"}


id: SO:1000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000186 sequence_variant_causing_cryptic_splice_donor_activation (obsolete SO:1000186)","synonyms":[{"name":"sequence variant causing cryptic splice donor activation","type":"exact"}],"termid":"SO:1000186"}


id: PBO:0060142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial poly(A) polymerase","termid":"PBO:0060142"}


id: GO:0035165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an embryonic mesoderm-derived hemocyte precursor cell acquires the specialized features of a crystal cell. Crystal cells are a class of cells that contain crystalline inclusions and are involved in the melanization of pathogenic material in the hemolymph.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic hemocyte differentiation","termid":"GO:0035163"},{"relation_name":"is_a","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic crystal cell differentiation","termid":"GO:0035165"}


id: GO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within the mucosal tissue of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","PMID:15609020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal lymphocyte homeostasis","termid":"GO:0002261"}


id: PBO:0063053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocase associated motor 16","termid":"PBO:0063053"}


id: GO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex comprising the chaperonin-containing T-complex and several other components involved in mediating sperm-oocyte Interaction.","definition_xrefs":["GOC:hjd","PMID:21880732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"zona pellucida receptor complex","synonyms":[{"name":"sperm protein complex I","type":"related"}],"termid":"GO:0002199"}


id: PBO:0053526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 523","termid":"PBO:0053526"}


id: FYPO:0003161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"RNA absent from cell during vegetative growth","secondary_identifiers":["FYPO:0004509"],"synonyms":[{"name":"RNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mRNA absent from cell","type":"narrow"},{"name":"mRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mRNA absent from cell during vegetative growth","type":"narrow"},{"name":"mRNA transcripts absent from cell","type":"narrow"},{"name":"messenger RNA absent from cell","type":"narrow"},{"name":"transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable RNA level during vegetative growth","type":"exact"},{"name":"undetectable mRNA level","type":"narrow"}],"termid":"FYPO:0003161"}


id: PBO:0078313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 9-1","termid":"PBO:0078313"}


id: PBO:0038657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 7, tartrate resistant (putative)","termid":"PBO:0038657"}


id: PR:Q10156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lkh1 gene.","definition_xrefs":["UniProtKB:Q10156","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity protein kinase lkh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.11c","synonyms":[{"name":"Spom972h-lkh1","type":"exact"}],"termid":"PR:Q10156"}


id: PBO:0053166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver enriched antimicrobial peptide 2","termid":"PBO:0053166"}


id: PBO:0047402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 40","termid":"PBO:0047402"}


id: GO:0050209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: polyvinyl alcohol + O2 = oxidized polyvinyl alcohol + H2O2.","definition_xrefs":["MetaCyc:POLYVINYL-ALCOHOL-OXIDASE-RXN","EC:1.1.3.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"polyvinyl-alcohol oxidase activity","secondary_identifiers":["RHEA:21688"],"synonyms":[{"name":"PVA oxidase activity","type":"related"},{"name":"dehydrogenase, polyvinyl alcohol","type":"related"},{"name":"polyvinyl-alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050209"}


id: PBO:0028449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_at_silent_mating-type_cassette","termid":"PBO:0028449"}


id: GO:0019808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polyamine, an organic compound containing two or more amino groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polyamine binding","termid":"GO:0019808"}


id: GO:0080045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 3'-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"quercetin 3'-O-glucosyltransferase activity","termid":"GO:0080045"}


id: PBO:0031311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_assembly","termid":"PBO:0031311"}


id: FYPO:0004977
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a new cell tip is increased.","definition_xrefs":["PomBase:mah","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to cell tip during vegetative growth","termid":"FYPO:0002852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to new cell tip","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to new cell tip","type":"exact"},{"name":"increased protein localization to new cell end","type":"exact"},{"name":"increased protein localization to new cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to new cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0004977","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: GO:1902379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any chemoattractant activity that is involved in axon guidance.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:21658587","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattractant activity","termid":"GO:0042056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140677","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"chemoattractant activity involved in axon guidance","synonyms":[{"name":"chemoattractant activity involved in axon chemotaxis","type":"related"},{"name":"chemoattractant activity involved in axon growth cone guidance","type":"narrow"},{"name":"chemoattractant activity involved in axon pathfinding","type":"exact"}],"termid":"GO:1902379"}


id: PBO:0049046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37","termid":"PBO:0049046"}


id: GO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the blood vessels of the heart over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vasculature development","synonyms":[{"name":"cardiac blood vessel development","type":"exact"},{"name":"cardiac vasculature development","type":"exact"},{"name":"coronary blood vessel development","type":"exact"},{"name":"heart blood vessel development","type":"exact"},{"name":"heart vasculature development","type":"exact"}],"termid":"GO:0060976"}


id: PBO:0056584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator 1","termid":"PBO:0056584"}


id: PBO:0072132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 9","termid":"PBO:0072132"}


id: GO:0048570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the notochord are generated and organized. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"part_of","term_name":"notochord development","termid":"GO:0030903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord morphogenesis","termid":"GO:0048570"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: PBO:0084765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mRNA maturase with a role in splicing; encoded by both exon and intron sequences of partially processed COB mRNA","termid":"PBO:0084765"}


id: PBO:0055837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich alpha-2-glycoprotein 1","termid":"PBO:0055837"}


id: PBO:0084066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein, stimulates the GTPase activity of Sar1p; component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, involved in ER to Golgi transport; substrate of Ubp3/Bre5 complex; ubiquitylated by Ub-ligase Rsp5p; proteasome-mediated degradation of Sec23p is regulated by Cdc48p","termid":"PBO:0084066"}


id: PR:Q9UUD6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.04c","synonyms":[{"name":"Spom972h-ubp11","type":"exact"},{"name":"deubiquitinating enzyme 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUD6"}


id: GO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of a peptide-linked thiazoline to thiazole.","definition_xrefs":["GOC:mah","PMID:19058272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"peptidyl-thiazoline dehydrogenase activity","termid":"GO:0018136"}


id: GO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of the DSCAM-based immune receptors of insects.","definition_xrefs":["GOC:add","PMID:16261174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of DSCAM-based immune receptors","termid":"GO:0002201"}


id: GO:0044166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the host cell endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum lumen","synonyms":[{"name":"host endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0044166"}


id: PBO:0041577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 91","termid":"PBO:0041577"}


id: GO:0043854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress and when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:jl","PMID:22206667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensitive monoatomic ion channel activity","termid":"GO:0008381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cyclic nucleotide-gated mechanosensitive monoatomic ion channel activity","synonyms":[{"name":"MscS","type":"related"},{"name":"cyclic nucleotide gated mechanosensitive ion channel activity","type":"exact"},{"name":"cyclic nucleotide regulated mechanosensitive ion channel","type":"exact"},{"name":"cyclic nucleotide-gated mechanosensitive ion channel activity","type":"broad"},{"name":"cyclic nucleotide-regulated mechanosensitive ion channel","type":"exact"},{"name":"cyclic nucleotide-regulated small mechanosensitive ion channel","type":"related"},{"name":"small conductance mechanosensitive ion channel","type":"exact"}],"termid":"GO:0043854"}


id: PBO:0048086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 7","termid":"PBO:0048086"}


id: PBO:0088809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec72","termid":"PBO:0088809"}


id: GO:0050515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.148","RHEA:18437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity","secondary_identifiers":["MetaCyc:2.7.1.148-RXN","GO:0008698","KEGG_REACTION:R05634"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol kinase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol kinase activity","type":"exact"},{"name":"ATP:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol 2-phosphotransferase activity","type":"related"},{"name":"CDP-ME kinase activity","type":"related"},{"name":"CMK activity","type":"related"}],"termid":"GO:0050515"}


id: FYPO:0000784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to nucleus during vegetative growth","secondary_identifiers":["FYPO:0001251"],"synonyms":[{"name":"ectopic protein localization to nucleus during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000784"}


id: PBO:0068659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 40, pseudogene","termid":"PBO:0068659"}


id: PBO:0062019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 13","termid":"PBO:0062019"}


id: GO:0031251
data:
  {"annotated_genes":["SJAG_01910","SJAG_02808","SJAG_00966"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77712,87599,104544],"is_not":false,"summary":null,"term":"GO:0031251"}]},"cv_name":"cellular_component","definition":"A complex that possesses poly(A)-specific ribonuclease activity; catalyzes the message-specific shortening of mRNA poly(A) tails. Contains at least two subunits, known as Pan2p and Pan3p in Saccharomyces.","definition_xrefs":["PMID:9774670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00966":null,"SJAG_01910":null,"SJAG_02808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"PAN complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"poly(A) nuclease complex","type":"exact"}],"termid":"GO:0031251","terms_by_termid":{"GO:0031251":null}}


id: PBO:0062984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGS2 antisense NFKB1 complex-mediated expression regulator RNA","termid":"PBO:0062984"}


id: GO:0051757
data:
  {"annotated_genes":["SJAG_04457","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89518,105507],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"}]},"cv_name":"biological_process","definition":"The process in which sister chromatids are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai","PMID:14730319","PMID:16325576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic sister chromatid resolution","type":"exact"}],"termid":"GO:0051757","terms_by_termid":{"GO:0051755":null}}


id: PBO:0080840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 4","termid":"PBO:0080840"}


id: GO:0019885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen","termid":"GO:0002483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","secondary_identifiers":["GO:0048004"],"synonyms":[{"name":"antigen presentation, endogenous peptide antigen","type":"broad"},{"name":"antigen processing, endogenous antigen via MHC class I","type":"broad"},{"name":"antigen processing, endogenous antigen via major histocompatibility complex class I","type":"broad"},{"name":"endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0019885"}


id: GO:0035480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"regulates","term_name":"Notch signaling pathway involved in heart induction","termid":"GO:0003137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Notch signaling pathway involved in heart induction","synonyms":[{"name":"regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035480"}


id: GO:0000309
data:
  {"annotated_genes":["SJAG_01500","SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71095,74180],"is_not":false,"summary":null,"term":"GO:0000309"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nicotinamide nucleotide = diphosphate + NAD+.","definition_xrefs":["EC:2.7.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01500":null,"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["RHEA:21360","MetaCyc:2.7.7.1-RXN","Reactome:R-HSA-8939959"],"synonyms":[{"name":"ATP:NMN adenylyltransferase activity","type":"related"},{"name":"ATP:nicotinamide-nucleotide adenylyltransferase activity","type":"exact"},{"name":"NAD(+) diphosphorylase activity","type":"narrow"},{"name":"NAD(+) pyrophosphorylase activity","type":"narrow"},{"name":"NAD+ diphosphorylase activity","type":"related"},{"name":"NAD+ pyrophosphorylase activity","type":"related"},{"name":"NMN adenylyltransferase activity","type":"narrow"},{"name":"NMNAT activity","type":"narrow"},{"name":"adenosine triphosphate-nicotinamide mononucleotide transadenylase activity","type":"related"},{"name":"diphosphopyridine nucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide pyrophosphorylase activity","type":"narrow"},{"name":"nicotinamide mononucleotide adenylyltransferase activity","type":"narrow"}],"termid":"GO:0000309","terms_by_termid":{"GO:0000309":null}}


id: PBO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein","termid":"PBO:0002566"}


id: PBO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 8","termid":"PBO:0046835"}


id: GO:0035937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of estrogen into the circulatory system. Estrogen is a steroid hormone that stimulates or controls the development and maintenance of female sex characteristics in mammals.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"estrogen secretion","synonyms":[{"name":"oestrogen secretion","type":"related"}],"termid":"GO:0035937"}


id: FYPO:0005192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular response to nitrogen starvation","synonyms":[{"name":"normal cellular response to nitrogen depletion","type":"exact"},{"name":"normal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005192"}


id: PBO:0110325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR2 pseudogene 1","termid":"PBO:0110325"}


id: PBO:0067105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 147, pseudogene","termid":"PBO:0067105"}


id: GO:1905449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18832707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060368"},{"relation_name":"regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"regulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905449"}


id: GO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to protein kinase A and anchors it to a particular subcellular location.","definition_xrefs":["PMID:10354567"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase A anchoring activity (obsolete GO:0005079)","synonyms":[{"name":"A-kinase anchor protein activity","type":"exact"},{"name":"AKAP activity","type":"exact"},{"name":"protein kinase A anchoring activity","type":"exact"}],"termid":"GO:0005079"}


id: PBO:0078793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 15-2","termid":"PBO:0078793"}


id: GO:0018621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-sulfobenzoate + H+ + NADH + O2 = 3,4-dihydroxybenzoate + NAD+ + sulfite.","definition_xrefs":["EC:1.14.12.8","RHEA:13937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-sulfobenzoate 3,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R01636","MetaCyc:4-SULFOBENZOATE-34-DIOXYGENASE-RXN","UM-BBD_reactionID:r0293"],"synonyms":[{"name":"4-sulfobenzoate 3,4-dioxygenase system","type":"related"},{"name":"4-sulfobenzoate dioxygenase activity","type":"related"},{"name":"4-sulfobenzoate,NADH:oxygen oxidoreductase (3,4-hydroxylating, sulfite-forming)","type":"related"},{"name":"4-sulphobenzoate 3,4-dioxygenase activity","type":"exact"}],"termid":"GO:0018621"}


id: PBO:0040471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"all-trans retinoic acid induced differentiation factor","termid":"PBO:0040471"}


id: FYPO:0008045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than four nuclei, is longer than normal, and has a greater length:diameter ratio than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000005","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}


id: PBO:0076110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 17","termid":"PBO:0076110"}


id: PR:O14008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cam2 gene.","definition_xrefs":["UniProtKB:O14008","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin 1 light chain cam2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.05","synonyms":[{"name":"Spom972h-cam2","type":"exact"},{"name":"calmodulin-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14008"}


id: PBO:0014286
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe cyclin C Homology","termid":"PBO:0014286"}


id: GO:1904427
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["PMID:22910094","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion membrane transport","type":"narrow"},{"name":"activation of calcium ion transmembrane transport","type":"narrow"},{"name":"activation of transmembrane calcium transport","type":"narrow"},{"name":"positive regulation of calcium ion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane calcium transport","type":"exact"},{"name":"up regulation of calcium ion membrane transport","type":"exact"},{"name":"up regulation of calcium ion transmembrane transport","type":"exact"},{"name":"up regulation of transmembrane calcium transport","type":"exact"},{"name":"up-regulation of calcium ion membrane transport","type":"exact"},{"name":"up-regulation of calcium ion transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane calcium transport","type":"exact"},{"name":"upregulation of calcium ion membrane transport","type":"exact"},{"name":"upregulation of calcium ion transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1904427","terms_by_termid":{"GO:1905665":null}}


id: PBO:0091204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu","termid":"PBO:0091204"}


id: GO:0070490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Pup protein is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of Pup and the epsilon-amino group of a lysine residue of the target protein.","definition_xrefs":["PMID:18980670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein pupylation","synonyms":[{"name":"Pup-protein conjugation","type":"exact"},{"name":"pupylation","type":"exact"}],"termid":"GO:0070490"}


id: GO:0002890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immunoglobulin mediated immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"negatively_regulates","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immunoglobulin mediated immune response","synonyms":[{"name":"down regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"down-regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"downregulation of immunoglobulin mediated immune response","type":"exact"},{"name":"inhibition of immunoglobulin mediated immune response","type":"narrow"}],"termid":"GO:0002890"}


id: PBO:0058634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6766","termid":"PBO:0058634"}


id: PBO:0084949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL43 trans-acting MAL-activator, MAL41 maltose permease, and MAL42 maltase; on right arm of Chromosome XI, but not in strain S288C","termid":"PBO:0084949"}


id: PBO:0057695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1284","termid":"PBO:0057695"}


id: FYPO:0004768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular arginine level","termid":"FYPO:0005263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar arginine level","synonyms":[{"name":"increased level of arginine in vacuole","type":"exact"},{"name":"increased vacuolar L-arginine level","type":"exact"},{"name":"increased vacuolar arginine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar arginine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004768"}


id: GO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + O2 = glutathione disulfide + H2O2.","definition_xrefs":["EC:1.8.3.3","RHEA:24112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutathione oxidase activity","secondary_identifiers":["MetaCyc:GLUTATHIONE-OXIDASE-RXN","KEGG_REACTION:R00120"],"synonyms":[{"name":"glutathione:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047950"}


id: PBO:0050435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L","termid":"PBO:0050435"}


id: PBO:0075001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-12","termid":"PBO:0075001"}


id: PBO:0086363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase","termid":"PBO:0086363"}


id: MOD:01902
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-isoleucine residue and an L-serine residue to form L-cysteine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:21950656","PubMed:21568297","RESID:AA0573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-isoleucine residue","termid":"MOD:02049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine oxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2S)-1-amino-2-methylbutyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S,2S)-1-azanyl-2-methylbutyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Ile-Ser)","type":"exact"},{"name":"L-isoleucine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01902"}


id: PBO:0027825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meroterically_attached_lagging_mitotic_chromosomes","termid":"PBO:0027825"}


id: PBO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid P component, serum","termid":"PBO:0039692"}


id: PBO:0041278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 4","termid":"PBO:0041278"}


id: PBO:0062012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 1 pseudogene","termid":"PBO:0062012"}


id: FYPO:0000458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9me during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000458"}


id: SO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyladenosine","secondary_identifiers":["RNAMOD:003"],"synonyms":[{"name":"N6 methyladenosine","type":"exact"},{"name":"N6-methyladenosine","type":"exact"},{"name":"m6A","type":"exact"}],"termid":"SO:0001297"}


id: PBO:0065811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3 GTPase activating protein catalytic subunit 1","termid":"PBO:0065811"}


id: FYECO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Zinc was reintroduced to cells following a period of zinc starvation.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc starvation followed by zinc shock","termid":"FYECO:0000345"}


id: PBO:0087969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transverse filament protein of the synaptonemal complex; required for normal levels of meiotic recombination and pairing between homologous chromosome during meiosis; required for meiotic recombination between non-allelc sites; potential Cdc28p substrate","termid":"PBO:0087969"}


id: PR:Q9P6L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end4 gene.","definition_xrefs":["UniProtKB:Q9P6L5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis protein end4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.11","synonyms":[{"name":"SLA2 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-end4","type":"exact"}],"termid":"PR:Q9P6L5"}


id: GO:1902590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An organelle organization which involves another organism.","definition_xrefs":["GOC:TermGenie","GO_REF:0000089","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism organelle organization (obsolete GO:1902590)","synonyms":[{"name":"multi organism organelle organization","type":"exact"}],"termid":"GO:1902590"}


id: PBO:0057645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1237","termid":"PBO:0057645"}


id: PBO:0045054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 2","termid":"PBO:0045054"}


id: PBO:0046965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member C","termid":"PBO:0046965"}


id: PBO:0036388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human AIG1 and ADTRP ortholog","termid":"PBO:0036388"}


id: PR:O74908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-splicing endonuclease subunit Sen54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21027:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.09","secondary_identifiers":["UniProtKB:O74908"],"synonyms":[{"name":"SPCC613.09","type":"related"},{"name":"Spom972h-TSEN54","type":"exact"},{"name":"tRNA-intron endonuclease sen54 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74908"}


id: PBO:0076152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGCT antisense RNA 1","termid":"PBO:0076152"}


id: PBO:0036154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_tRNA_genes","termid":"PBO:0036154"}


id: PBO:0043293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 12 member A","termid":"PBO:0043293"}


id: PBO:0084615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease; involved in N-terminal processing of pro-a-factor to mature form; expressed in both haploids and diploids; one of two yeast homologs of human insulin-degrading enzyme (hIDE); homolog Axl1p is also involved in processing of pro-a-factor","termid":"PBO:0084615"}


id: PBO:0077966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 18-2","termid":"PBO:0077966"}


id: PBO:0052838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-3","termid":"PBO:0052838"}


