# terms

id: PBO:0081668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 589","termid":"PBO:0081668"}


id: SO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The ends of a DNA loop where the two strands of DNA are held in close physical proximity. During interphase the anchors of DNA loops are convergently oriented CTCF binding sites.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"},{"relation_name":"part_of","term_name":"DNA_loop","termid":"SO:0002307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop_anchor","synonyms":[{"name":"DNA loop anchor","type":"exact"}],"termid":"SO:0002308"}


id: GO:0045290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + NAD(P)+ = D-arabinono-1,4-lactone + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-arabinose 1-dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.117-RXN"],"synonyms":[{"name":"D-arabinose:NAD(P)+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0045290"}


id: PBO:0061646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 4","termid":"PBO:0061646"}


id: PR:O94679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03605","PANTHER:PTHR14222:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.13","secondary_identifiers":["UniProtKB:O94679"],"synonyms":[{"name":"Spom972h-NCAPD2","type":"exact"},{"name":"XCAP-D2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p128 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O94679"}


id: FYPO:0002968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during G2 phase of the cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during interphase","termid":"FYPO:0003308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during G2","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during G2","type":"exact"},{"name":"normal protein localization to mitotic SPB during G2","type":"exact"},{"name":"normal protein localization to spindle pole body during G2 during mitotic cell cycle","type":"related"},{"name":"normal protein localization to spindle pole body during G2 vegetative growth","type":"exact"}],"termid":"FYPO:0002968"}


id: PBO:0049333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 1","termid":"PBO:0049333"}


id: GO:0019168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-octaprenylphenol + NADPH + O2 + H+ = 2-octaprenyl-6-hydroxyphenol + NADP+ + H2O.","definition_xrefs":["MetaCyc:2-OCTAPRENYLPHENOL-HYDROX-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-octaprenylphenol hydroxylase activity","secondary_identifiers":["RHEA:27790"],"termid":"GO:0019168"}


id: GO:0006471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["RESID:AA0169","RESID:AA0237","RESID:AA0231","RESID:AA0168","GOC:pr","RESID:AA0295","RESID:AA0040"],"gene_count":0,"genotype_count":0,"name":"obsolete protein ADP-ribosylation (obsolete GO:0006471)","synonyms":[{"name":"protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0006471"}


id: PBO:0068060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 365","termid":"PBO:0068060"}


id: PBO:0017578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1 (predicted)","termid":"PBO:0017578"}


id: GO:1903381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0036483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of ER stress-induced neuron apoptosis","type":"broad"},{"name":"regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of endoplasmic reticulum stress-induced neuron apoptosis","type":"broad"},{"name":"regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903381"}


id: PBO:0064099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 1","termid":"PBO:0064099"}


id: PBO:0046211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 4","termid":"PBO:0046211"}


id: SO:0001941
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 91st residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K91_acetylation_site","synonyms":[{"name":"H4K91 acetylation site","type":"exact"},{"name":"H4K91ac","type":"exact"}],"termid":"SO:0001941"}


id: PATO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality in which events occur in sequence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"time","termid":"PATO:0000165"}


id: PBO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC17 pseudogene 1","termid":"PBO:0045230"}


id: GO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unwinding, or local denaturation, of the DNA duplex to create a bubble around the site of the DNA damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA duplex unwinding","termid":"GO:0032508"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA duplex unwinding","termid":"GO:0000717"}


id: GO:0022629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The small subunit of a ribosome contained within a chloroplast.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid small ribosomal subunit","termid":"GO:0000312"},{"relation_name":"part_of","term_name":"chloroplast ribosome","termid":"GO:0043253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast small ribosomal subunit","synonyms":[{"name":"chloroplast ribosomal SSU complex","type":"exact"},{"name":"chloroplast ribosomal small subunit complex","type":"exact"}],"termid":"GO:0022629"}


id: GO:0070579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylcytosine (5mC) in DNA + 2-oxoglutarate + O2 = 5-hydroxymethylcytosine (5hmC) in DNA + succinate + CO2. This reaction is the first step in the removal of cytosine methylated on position 5 in double-stranded DNA. This activity can iteratively oxidize 5hmC to 5-formylcytosine (5fC) and to 5-carboxylcytosine (5caC).","definition_xrefs":["PMID:21496894","PMID:19372391","PMID:21778364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5-methylcytosine dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-5220990","Reactome:R-HSA-5220952","Reactome:R-HSA-5221014","Reactome:R-HSA-9817458","EC:1.14.11.80","WIkipedia:DNA_demethylation"],"synonyms":[{"name":"methylcytosine dioxygenase activity","type":"broad"}],"termid":"GO:0070579"}


id: GO:0010515
data:
  {"annotated_genes":["SJAG_03081","SJAG_01311","SJAG_00526","SJAG_04312","SJAG_01699","SJAG_01084","SJAG_02730","SJAG_04026","SJAG_00600","SJAG_02444","SJAG_01254","SJAG_02266","SJAG_02773","SJAG_00975","SJAG_02723","SJAG_02592","SJAG_00472"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83992,87081,88566,89853,89995,96038,97334,99943,101219,101312,101892,102047,102238,104361,109701,110719,111262],"is_not":false,"summary":null,"term":"GO:0010515"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency or rate of initiation of conjugation with cellular fusion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of conjugation with cellular fusion","termid":"GO:0031138"},{"relation_name":"negatively_regulates","term_name":"induction of conjugation with cellular fusion","termid":"GO:0010514"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01699":null,"SJAG_02266":null,"SJAG_02444":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"negative regulation of induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010515","terms_by_termid":{"GO:0010515":null}}


id: PR:P0CT73
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1101 gene.","definition_xrefs":["UniProtKB:P0CT73","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.03","synonyms":[{"name":"Spom972h-rps1101","type":"exact"}],"termid":"PR:P0CT73"}


id: PBO:0011101
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription repressed by copper","termid":"PBO:0011101"}


id: GO:0019269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glutamate, catalyzed by the enzyme glutamate synthase (NADPH).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate biosynthetic process, using glutamate synthase (NADPH) (obsolete GO:0019269)","synonyms":[{"name":"glutamate anabolism, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamate biosynthetic process, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamate formation, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamate synthesis, using glutamate synthase (NADPH)","type":"exact"}],"termid":"GO:0019269"}


id: PR:Q9Y7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ORAOV1 family protein C191.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.08","synonyms":[{"name":"Spom972h-lto1","type":"exact"}],"termid":"PR:Q9Y7Q1"}


id: GO:0099034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endosome membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic endosome membrane (obsolete GO:0099034)","termid":"GO:0099034"}


id: PBO:0073249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2 pseudogene 1","termid":"PBO:0073249"}


id: GO:0004814
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75585],"is_not":false,"summary":null,"term":"GO:0004814"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).","definition_xrefs":["EC:6.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0016874","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"arginine-tRNA ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-379993","RHEA:20301","Reactome:R-HSA-380224","MetaCyc:ARGININE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-arginine:tRNAArg ligase (AMP-forming)","type":"related"},{"name":"arginine translase activity","type":"related"},{"name":"arginine-tRNA synthetase activity","type":"related"},{"name":"arginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"arginyl-tRNA synthetase activity","type":"exact"},{"name":"arginyl-transfer RNA synthetase activity","type":"related"},{"name":"arginyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004814","terms_by_termid":{"GO:0004814":null}}


id: PBO:0083419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YFR055W","termid":"PBO:0083419"}


id: PBO:0028732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylcysteine_sulfoxide_level_during_vegetative_growth","termid":"PBO:0028732"}


id: GO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An specialized occluding junction where three epithelial cells meet. It is composed of a branching network of sealing strands that run perpendicularly to the bicellular tight junction at the point of contact between three epithelial cells in an epithelial sheet.","definition_xrefs":["GOC:dk","PMID:22520461","PMID:25822906","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tricellular tight junction","termid":"GO:0061689"}


id: PBO:0090857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proline transmembrane transporter Put4","termid":"PBO:0090857"}


id: PBO:0070873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 4","termid":"PBO:0070873"}


id: PBO:0068316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF14 pseudogene 4","termid":"PBO:0068316"}


id: GO:0021625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the oculomotor nerve to attain its fully functional state. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve maturation","synonyms":[{"name":"CN III maturation","type":"related"}],"termid":"GO:0021625"}


id: GO:0030995
data:
  {"annotated_genes":["SJAG_03444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114278],"is_not":false,"summary":null,"term":"GO:0030995"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the dissolution of the septum edging during cell separation.","definition_xrefs":["GOC:mah","PMID:15194814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"extracellular polysaccharide catabolic process","termid":"GO:0071999"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell septum edging catabolic process","references_by_uniquename":{"PMID:24699070":null},"synonyms":[{"name":"cell septum edging hydrolysis","type":"exact"},{"name":"hydrolysis of cell septum edging","type":"exact"},{"name":"hydrolysis of edging of cell septum","type":"exact"},{"name":"septum edging hydrolysis","type":"broad"}],"termid":"GO:0030995","terms_by_termid":{"GO:0030995":null}}


id: GO:0140701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(3'-5')A-P(3'-5') (cyclic 3',3' GAMP).","definition_xrefs":["PMID:30787435","RHEA:35647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"3',3'-cyclic GMP-AMP synthase activity","synonyms":[{"name":"3',3' cyclic-GAMP synthase activity","type":"exact"},{"name":"3',3' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"3',3'-cyclic GAMP synthase activity","type":"exact"}],"termid":"GO:0140701"}


id: PBO:0012532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_commitment_to","termid":"PBO:0012532"}


id: PBO:0067093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 130, pseudogene","termid":"PBO:0067093"}


id: MOD:00112
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-12-hydroxyfarnesyl-L-cysteine.","definition_xrefs":["RESID:AA0103","Unimod:376","PubMed:17790543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated cysteine","termid":"MOD:01110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-12-hydroxyfarnesyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E,6E,10Z)-12-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(12-hydroxy-3,7,11-trimethyl-3,6,10-dodecatrienylthio)propanoic acid","type":"exact"},{"name":"Hydroxyfarnesyl","type":"related"},{"name":"LIPID S-12-hydroxyfarnesyl cysteine","type":"exact"},{"name":"S-12-hydroxyfarnesyl-L-cysteine","type":"exact"},{"name":"S12HyFarnCys","type":"exact"},{"name":"hydroxyfarnesyl","type":"related"}],"termid":"MOD:00112"}


id: PBO:0074568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 22","termid":"PBO:0074568"}


id: PBO:0068969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 213, pseudogene","termid":"PBO:0068969"}


id: PBO:0059667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 33","termid":"PBO:0059667"}


id: PBO:0077068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMPD3 antisense RNA 1","termid":"PBO:0077068"}


id: PBO:0050154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 10","termid":"PBO:0050154"}


id: GO:0031593
data:
  {"annotated_genes":["SJAG_00941","SJAG_00052","SJAG_03345","SJAG_04384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70873,74886,75184],"is_not":false,"summary":null,"term":"GO:0031593"},{"annotations":[76329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036435"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination of the target protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00941":null,"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"polyubiquitin modification-dependent protein binding","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0031593","terms_by_termid":{"GO:0031593":null,"GO:0036435":null}}


id: PBO:0089044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph3","termid":"PBO:0089044"}


id: PBO:0067839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 141","termid":"PBO:0067839"}


id: PBO:0081817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 10, Y-linked","termid":"PBO:0081817"}


id: PBO:0058139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-1","termid":"PBO:0058139"}


id: PBO:0057578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 875","termid":"PBO:0057578"}


id: PBO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3h (p40)","termid":"PBO:0000708"}


id: GO:0051559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phlobaphenes, red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"phlobaphene metabolic process","termid":"GO:0051558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phlobaphene biosynthetic process","termid":"GO:0051559"}


id: PBO:0038277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unspecified","termid":"PBO:0038277"}


id: GO:0035359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the peroxisome proliferator activated receptor signaling pathway.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of peroxisome proliferator activated receptor signaling pathway","termid":"GO:0035358"},{"relation_name":"negatively_regulates","term_name":"peroxisome proliferator activated receptor signaling pathway","termid":"GO:0035357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of peroxisome proliferator activated receptor signaling pathway","synonyms":[{"name":"negative regulation of PPAR signaling pathway","type":"exact"},{"name":"negative regulation of peroxisome proliferator activated receptor signalling pathway","type":"exact"},{"name":"negative regulation of peroxisome proliferator-activated receptor signaling pathway","type":"exact"}],"termid":"GO:0035359"}


id: PBO:0079535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2SURP pseudogene 1","termid":"PBO:0079535"}


id: GO:1904145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.","definition_xrefs":["GOC:TermGenie","PMID:22674394","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of oocyte maturation","termid":"GO:1900194"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903538"},{"relation_name":"negatively_regulates","term_name":"meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"down regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"down-regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"downregulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"inhibition of meiotic cell cycle process involved in oocyte maturation","type":"narrow"}],"termid":"GO:1904145"}


id: GO:0016905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myosin-heavy-chain = ADP + myosin-heavy-chain phosphate.","definition_xrefs":["EC:2.7.11.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calmodulin-dependent protein kinase activity","termid":"GO:0004683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140096","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"myosin heavy chain kinase activity","secondary_identifiers":["RHEA:11424"],"synonyms":[{"name":"ATP:myosin heavy-chain O-phosphotransferase activity","type":"related"},{"name":"ATP:myosin-heavy-chain O-phosphotransferase activity","type":"related"},{"name":"MHCK","type":"related"},{"name":"MIHC kinase activity","type":"related"},{"name":"STK6","type":"related"},{"name":"calmodulin-dependent myosin heavy chain kinase activity","type":"related"},{"name":"myosin I heavy chain kinase activity","type":"narrow"},{"name":"myosin I heavy-chain kinase activity","type":"narrow"},{"name":"myosin II heavy chain kinase activity","type":"narrow"},{"name":"myosin II heavy-chain kinase activity","type":"narrow"},{"name":"myosin heavy chain kinase A activity","type":"related"},{"name":"myosin heavy-chain kinase activity","type":"related"},{"name":"myosin-heavy-chain kinase activity","type":"related"}],"termid":"GO:0016905"}


id: PBO:0054851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2265","termid":"PBO:0054851"}


id: PBO:0049490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.12 linker histone, cluster member, pseudogene","termid":"PBO:0049490"}


id: PBO:0067734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 33","termid":"PBO:0067734"}


id: GO:0070414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:jp","GOC:mah","PMID:9797333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"part_of","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose metabolism in response to heat stress","synonyms":[{"name":"trehalose metabolic process involved in response to heat stress","type":"exact"}],"termid":"GO:0070414"}


id: FYPO:0007658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell forms a mating projection with a flatter (less rounded) tip than normal.","definition_xrefs":["PMID:9606213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo morphology","termid":"FYPO:0000357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000301"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301","FYPO:0000002"],"is_obsolete":false,"name":"shmoo with flat tip","synonyms":[{"name":"conjugation tube with flat tip","type":"exact"},{"name":"mating projection with flat tip","type":"exact"},{"name":"shmoo with flattened tip","type":"exact"}],"termid":"FYPO:0007658"}


id: PBO:0091562
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FolliculiN-interacting Protein","termid":"PBO:0091562"}


id: PATO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000961 relative opacity value (obsolete PATO:0000961)","termid":"PATO:0000961"}


id: PBO:0075005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-16","termid":"PBO:0075005"}


id: PBO:0089520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP 3'-tRNA nucleotidyltransferase Cca1","termid":"PBO:0089520"}


id: GO:0099635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Positive regulation of presynaptic cytosolic calcium ion concentrations via the directed movement of calcium ions across the plasma-membrane into the cytosol via the action of voltage-gated calcium ion channels. This is the first step in synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in positive regulation of presynaptic cytosolic calcium levels","secondary_identifiers":["Reactome:R-HSA-9659515"],"termid":"GO:0099635"}


id: PBO:0091100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8","termid":"PBO:0091100"}


id: PBO:0041244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 122","termid":"PBO:0041244"}


id: PBO:0005184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asteroid homolog, XP-G family protein","termid":"PBO:0005184"}


id: PR:Q10074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- avt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.09c","synonyms":[{"name":"Spom972h-avt3","type":"exact"}],"termid":"PR:Q10074"}


id: PBO:0068382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 183","termid":"PBO:0068382"}


id: FYPO:0005664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is viable, and becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:12399381","PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"has_part","term_name":"elongated cell during nitrogen starvation","termid":"FYPO:0000998"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"elongated cell during nitrogen starvation","termid":"FYPO:0000998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"viable elongated cell during nitrogen starvation","synonyms":[{"name":"cdr phenotype","type":"exact"},{"name":"viable elongated cell during nitrogen depletion","type":"exact"},{"name":"viable elongated cell during nitrogen deprivation","type":"exact"},{"name":"viable long cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005664"}


id: PBO:0069112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 361, pseudogene","termid":"PBO:0069112"}


id: PBO:0068273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 10 (inactive)","termid":"PBO:0068273"}


id: GO:0102793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate + soyasapogenol B = H+ + UDP + soyasapogenol B 3-O-beta-glucuronate.","definition_xrefs":["GOC:pz","EC:2.4.1.262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"soyasapogenol B glucuronosyltransferase activity","secondary_identifiers":["RHEA:31475","MetaCyc:RXN-8086"],"termid":"GO:0102793"}


id: PBO:0084097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Ria1p; essential protein involved in ribosome maturation; with Ria1p, promotes release of Tif6p from 60S ribosomal subunits in the cytoplasm so that they can assemble with 40S subunits to generate mature ribosomes; ortholog of the human protein (SBDS) responsible for autosomal recessive Shwachman-Bodian-Diamond Syndrome; highly conserved across archaea and eukaryotes","termid":"PBO:0084097"}


id: GO:0042786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mechanism of active immune avoidance which works by regulating the host's antigen processing or presentation pathways, e.g. by blocking any stage in MHC class II presentation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evasion of host immune response","termid":"GO:0042783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"evasion of host immune response via modulation of host antigen processing and presentation","secondary_identifiers":["GO:0051813"],"synonyms":[{"name":"active evasion of host immune response via regulation of host antigen processing and presentation","type":"related"},{"name":"active evasion of host immune response via regulation of host antigen processing and presentation pathway","type":"exact"},{"name":"active evasion of immune response of other organism via regulation of antigen processing and presentation in other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of antigen processing and presentation","type":"exact"},{"name":"active immune evasion via modulation of antigen processing/presentation","type":"exact"},{"name":"active immune evasion via regulation of antigen processing and presentation","type":"exact"},{"name":"evasion of host immune response via regulation of host antigen processing and presentation","type":"exact"}],"termid":"GO:0042786"}


id: PBO:0077664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 11a","termid":"PBO:0077664"}


id: GO:0006653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any 1,2-diacyl-sn-glycero-3-phosphocholine, the compounds most commonly designated lecithin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1,2-diacyl-sn-glycero-3-phosphocholine metabolic process","synonyms":[{"name":"1,2-diacyl-sn-glycero-3-phosphocholine metabolism","type":"exact"},{"name":"lecithin metabolic process","type":"broad"}],"termid":"GO:0006653"}


id: GO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete Rieske iron-sulfur protein (obsolete GO:0000047)","synonyms":[{"name":"Rieske iron-sulfur protein","type":"exact"},{"name":"Rieske iron-sulphur protein","type":"exact"}],"termid":"GO:0000047"}


id: GO:0016823
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018773"},{"annotations":[102171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-carbon bond in a ketonic substance, a substance containing a keto (C=O) group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:3.7.1.-"],"termid":"GO:0016823","terms_by_termid":{"GO:0018773":null,"GO:0047621":null}}


id: GO:0070153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling leucine to leucyl-tRNA in a mitochondrion, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucyl-tRNA aminoacylation","termid":"GO:0006429"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0008150","GO:0006399","GO:0140053"],"is_obsolete":false,"name":"mitochondrial leucyl-tRNA aminoacylation","termid":"GO:0070153"}


id: FYPO:0000560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle after pheromone arrest is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"normal recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: normal","type":"related"}],"termid":"FYPO:0000560"}


id: GO:2000063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:obol","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"positively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ureter smooth muscle cell differentiation","termid":"GO:2000063"}


id: PBO:0053901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1191","termid":"PBO:0053901"}


id: PBO:0039479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A2, pseudogene","termid":"PBO:0039479"}


id: GO:2000576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of microtubule motor activity.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule motor activity (obsolete GO:2000576)","synonyms":[{"name":"positive regulation of axonemal motor activity","type":"related"},{"name":"positive regulation of dynein","type":"related"},{"name":"positive regulation of dynein ATPase activity","type":"related"},{"name":"positive regulation of kinesin","type":"related"},{"name":"positive regulation of kinesin motor activity","type":"related"},{"name":"positive regulation of kinetochore motor activity","type":"related"}],"termid":"GO:2000576"}


id: PBO:0108625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosome assembly protein Rsm2202, fusion protein","termid":"PBO:0108625"}


id: PBO:0038683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase short chain family member 2","termid":"PBO:0038683"}


id: GO:0098908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:dph","GOC:tb","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmission of nerve impulse","termid":"GO:0051969"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal action potential","synonyms":[{"name":"generation of action potential","type":"related"}],"termid":"GO:0098908"}


id: GO:0033177
data:
  {"annotated_genes":["SJAG_00516","SJAG_02782","SJAG_MIT09","SJAG_00985","SJAG_02105","SJAG_05204","SJAG_00133","SJAG_00836","SJAG_MIT37","SJAG_01913","SJAG_02023","SJAG_00542","SJAG_04122","SJAG_MIT15","SJAG_07003","SJAG_03925","SJAG_03406","SJAG_05294"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103274,97303,70210,114127,89505,114136,90455,88912,114132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000276"},{"annotations":[77965,99101,103187],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000274"},{"annotations":[95451,87710,85888,91257,99363,85576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and carries out proton transport across a membrane. The proton-transporting domain (F0, V0, or A0) includes integral and peripheral membrane proteins.","definition_xrefs":["PMID:10838056","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00985":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_05294":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, proton-transporting domain","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0033177","terms_by_termid":{"GO:0000220":null,"GO:0000274":null,"GO:0000276":null}}


id: PBO:0083008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific secreted protein with similarity to glucanases; degrades cell wall from the daughter side causing daughter to separate from mother; localizes in birth scars; expression is repressed by cAMP","termid":"PBO:0083008"}


id: PBO:0109299
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding sequence mRNA is required to establish mad1+-like expression","termid":"PBO:0109299"}


id: PBO:0071249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 90","termid":"PBO:0071249"}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: PBO:0090391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export adaptor Nmd3","termid":"PBO:0090391"}


id: GO:1905170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to phagocytic vesicle","termid":"GO:1905169"},{"relation_name":"negatively_regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"down regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localisation to phagosome","type":"exact"},{"name":"down regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"down regulation of protein recruitment to phagosome","type":"exact"},{"name":"down-regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localisation to phagosome","type":"exact"},{"name":"down-regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein recruitment to phagosome","type":"exact"},{"name":"downregulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localisation to phagosome","type":"exact"},{"name":"downregulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"downregulation of protein recruitment to phagosome","type":"exact"},{"name":"inhibition of protein localisation in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localisation to phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localisation to phagosome","type":"narrow"},{"name":"inhibition of protein localization in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localization to phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein recruitment to phagosome","type":"narrow"},{"name":"negative regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein localisation to phagosome","type":"exact"},{"name":"negative regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905170"}


id: SO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Extra nucleotides inserted between rearranged immunoglobulin segments.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N_region","synonyms":[{"name":"INSDC_feature:N_region","type":"exact"},{"name":"N-region","type":"exact"}],"termid":"SO:0001835"}


id: GO:0018981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving triethanolamine, a combustible, hygroscopic, colorless liquid commonly used in dry-cleaning solutions, cosmetics, detergents, textile processing, wool scouring, and as a corrosion inhibitor and pharmaceutical alkalizing agent.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine metabolic process (obsolete GO:0018981)","secondary_identifiers":["UM-BBD_pathwayID:tea"],"synonyms":[{"name":"triethanolamine metabolism","type":"exact"}],"termid":"GO:0018981"}


id: GO:1905757
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97848],"is_not":false,"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic division septum assembly","termid":"GO:0140280"},{"relation_name":"is_a","term_name":"regulation of primary cell septum biogenesis","termid":"GO:1905756"},{"relation_name":"negatively_regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905757","terms_by_termid":{"GO:1905757":null}}


id: GO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible reaction: (R,R)-butane-2,3-diol + NAD+ = (R)-acetoin + NADH + H+.","definition_xrefs":["EC:1.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R,R)-butanediol dehydrogenase activity","secondary_identifiers":["RHEA:24340","MetaCyc:RR-BUTANEDIOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-2,3-butanediol dehydrogenase activity","type":"related"},{"name":"(R)-diacetyl reductase activity","type":"related"},{"name":"1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"1-amino-2-propanol oxidoreductase activity","type":"related"},{"name":"2,3-butanediol dehydrogenase activity","type":"related"},{"name":"D-(-)-butanediol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol:NAD(2) oxidoreductase activity","type":"related"},{"name":"D-aminopropanol dehydrogenase activity","type":"related"},{"name":"D-butanediol dehydrogenase activity","type":"related"},{"name":"aminopropanol oxidoreductase activity","type":"related"},{"name":"butylene glycol dehydrogenase activity","type":"related"},{"name":"butyleneglycol dehydrogenase activity","type":"related"},{"name":"diacetyl (acetoin) reductase activity","type":"related"}],"termid":"GO:0000721"}


id: GO:0061575
data:
  {"annotated_genes":["SJAG_02057","SJAG_04614","SJAG_00439","SJAG_01401","SJAG_04140","SJAG_01213","SJAG_03618","SJAG_03699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70627,73775,78438,97129,106491,107364,108226,112232],"is_not":false,"summary":null,"term":"GO:0061575"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a cyclin-dependent protein serine/threonine kinase.","definition_xrefs":["PMID:3322810","PMID:2569363","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein serine/threonine kinase regulator activity","termid":"GO:0016538"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase activator activity","termid":"GO:0043539"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00439":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_02057":null,"SJAG_03618":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0016534","GO:0016535"],"synonyms":[{"name":"cyclin-dependent protein kinase 5 activator activity","type":"narrow"}],"termid":"GO:0061575","terms_by_termid":{"GO:0061575":null}}


id: FYPO:0006088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is normal (i.e. indistinguishable from wild type) during a cellular response to DNA damage. The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA binding during cellular response to DNA damage","synonyms":[{"name":"normal DNA binding in response to DNA damage","type":"related"}],"termid":"FYPO:0006088"}


id: PBO:0089032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase Utr4","termid":"PBO:0089032"}


id: PBO:0045437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 5","termid":"PBO:0045437"}


id: PBO:0043193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2 like","termid":"PBO:0043193"}


id: PR:O13912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.06c gene.","definition_xrefs":["UniProtKB:O13912","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.06c","synonyms":[{"name":"Spom972h-SPAC23C11.06c","type":"exact"}],"termid":"PR:O13912"}


id: PBO:0031390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_lysine","termid":"PBO:0031390"}


id: GO:0043524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"negatively_regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron apoptotic process","synonyms":[{"name":"down regulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of neuron apoptosis","type":"exact"},{"name":"downregulation of neuron apoptosis","type":"exact"},{"name":"inhibition of neuron apoptosis","type":"narrow"},{"name":"negative regulation of neuron apoptosis","type":"narrow"},{"name":"negative regulation of programmed cell death, neurons","type":"exact"},{"name":"neuron survival","type":"narrow"}],"termid":"GO:0043524"}


id: PBO:0090137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom22","termid":"PBO:0090137"}


id: PBO:0050467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOX transcript antisense RNA","termid":"PBO:0050467"}


id: RO:HOM0000060
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Between-species paralogy that involves single copy paralogs resulting from reciprocal gene loss.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_1_homology_relationship_with","termid":"RO:HOM0000019"},{"relation_name":"is_a","term_name":"in_between-species_paralogy_relationship_with","termid":"RO:HOM0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_apparent_orthology_relationship_with","synonyms":[{"name":"1:1 paralogy","type":"exact"},{"name":"apparent 1:1 orthology","type":"exact"},{"name":"apparent orthologous to","type":"exact"},{"name":"pseudoorthology","type":"exact"}],"termid":"RO:HOM0000060"}


id: PBO:0085715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in sporulation; required for the construction of the outer spore wall layers; required for proper localization of Spo14p","termid":"PBO:0085715"}


id: PBO:0038954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin receptor 1 pseudogene 1","termid":"PBO:0038954"}


id: GO:0008419
data:
  {"annotated_genes":["SJAG_01433"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76122],"is_not":false,"summary":null,"term":"GO:0008419"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of branched RNA structures that contain vicinal 2'-5'- and 3'-5'-phosphodiester bonds at a branch point nucleotide.","definition_xrefs":["PMID:7519612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"RNA lariat debranching enzyme activity","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0008419","terms_by_termid":{"GO:0008419":null}}


id: MOD:00476
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an galactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"galactosylated","termid":"MOD:00728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylated residue","synonyms":[{"name":"GalRes","type":"exact"}],"termid":"MOD:00476"}


id: PBO:0064953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 5","termid":"PBO:0064953"}


id: PBO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member H, pseudogene","termid":"PBO:0046984"}


id: PBO:0085304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85p cyclin of the Pho80p subfamily; forms the major Glc8p kinase together with Pcl7p and Pho85p; involved in the control of glycogen storage by Pho85p; stabilized by Elongin C binding; PCL6 has a paralog, PCL7, that arose from the whole genome duplication","termid":"PBO:0085304"}


id: GO:0106356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADPH + O2 = 3,4-dihydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:19477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase [NADPH] activity","termid":"GO:0106356"}


id: PBO:0054236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1618","termid":"PBO:0054236"}


id: GO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the second transesterification reaction of spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure.","definition_xrefs":["PMID:19239890","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"second spliceosomal transesterification activity","secondary_identifiers":["Reactome:R-HSA-9770236"],"synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"lariat formation, 5'-splice site cleavage","type":"related"}],"termid":"GO:0000386"}


id: PBO:0045535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxythymidylate kinase","termid":"PBO:0045535"}


id: FYPO:0002695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}


id: FYPO:0002542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a lower extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide (obsolete FYPO:0002542)","synonyms":[{"name":"decreased protein threonine phosphorylation at TP site during cellular response to hydrogen peroxide","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to H2O2","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation at threonine-proline site during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002542"}


id: GO:0005697
data:
  {"annotated_genes":["SJAG_03460","SJAG_00559","SJAG_02469","SJAG_01378","SJAG_01327","SJAG_04586","SJAG_05979","SJAG_01819","SJAG_00939","SJAG_03070","SJAG_05240","SJAG_03954"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70061,86345,91422,101746,103404,103488,103889,108137,110154,111053,111590],"is_not":false,"summary":null,"term":"GO:0005697"},{"annotations":[70933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000333"}]},"cv_name":"cellular_component","definition":"Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits.","definition_xrefs":["PMID:11884619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00559":null,"SJAG_00939":null,"SJAG_01327":null,"SJAG_01378":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_04586":null,"SJAG_05240":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"telomerase holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0005697","terms_by_termid":{"GO:0000333":null,"GO:0005697":null}}


id: FYPO:0001764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C48, C49, C60, C61 and C62 residues in a tRNA-Asp molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation","synonyms":[{"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation during vegetative growth","type":"exact"},{"name":"normal tRNA-Asp methylation on C48, C49, C60, C61 and C62","type":"exact"}],"termid":"FYPO:0001764"}


id: PBO:0084513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved endoplasmic reticulum membrane complex; involved in efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; interacts with Gal80p; homologous to worm H17B01.4/EMC-1, fly CG2943, and human KIAA0090","termid":"PBO:0084513"}


id: PBO:0067312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 398, pseudogene","termid":"PBO:0067312"}


id: PATO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001087 relative efficiency value (obsolete PATO:0001087)","termid":"PATO:0001087"}


id: PBO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex epsilon subunit Cct5","termid":"PBO:0000873"}


id: PR:O43031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.02c","synonyms":[{"name":"Spom972h-cwf28","type":"exact"},{"name":"complexed with cdc5 protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43031"}


id: GO:0033316
data:
  {"annotated_genes":["SJAG_03327","SJAG_04259","SJAG_01837","SJAG_01330","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111844],"is_not":false,"summary":null,"term":"GO:0033316"},{"annotations":[101718,109730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[109035],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[96838],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a meiotic spindle assembly checkpoint, that delays the metaphase/anaphase transition of a meiotic cell cycle until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle checkpoint signaling","termid":"GO:0044779"},{"relation_name":"is_a","term_name":"spindle assembly checkpoint signaling","termid":"GO:0071173"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"meiotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072465"],"synonyms":[{"name":"meiotic spindle assembly checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0033316","terms_by_termid":{"GO:0033316":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0048056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R3 and R4 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R3/R4 cell differentiation","termid":"GO:0048056"}


id: PBO:0039016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"afamin","termid":"PBO:0039016"}


id: GO:0070757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-35 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:add","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-35-mediated signaling pathway","synonyms":[{"name":"IL-35-mediated signaling pathway","type":"exact"},{"name":"interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070757"}


id: PBO:0003029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase (predicted)","termid":"PBO:0003029"}


id: FYPO:0002786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of riboflavin binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal riboflavin binding","termid":"FYPO:0002388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased riboflavin binding","synonyms":[{"name":"reduced riboflavin binding","type":"exact"}],"termid":"FYPO:0002786"}


id: PBO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 5","termid":"PBO:0050678"}


id: PBO:0084284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for ER to Golgi transport; localized to the Golgi, the ER, and COPII vesicles; interacts with Yip1p and Yif1p","termid":"PBO:0084284"}


id: FYPO:0005568
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[114614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000026"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the establishment or maintenance of cell polarity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_04280":null},"genotype_count":2,"genotypes_by_uniquename":{"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell polarity","references_by_uniquename":{"PMID:30664646":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_00409"],"single_locus_genotype_uniquenames":["gpd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell polarity process","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity","type":"exact"},{"name":"cell polarity defects","type":"exact"}],"termid":"FYPO:0005568","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000198":null,"FYPO_EXT:0000001":null}}


id: PBO:0041852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 2","termid":"PBO:0041852"}


id: PBO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq4 (predicted)","termid":"PBO:0000662"}


id: PBO:0049843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEATR5A divergent transcript","termid":"PBO:0049843"}


id: PBO:0003097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Pmr1","termid":"PBO:0003097"}


id: PBO:0069836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1122, pseudogene","termid":"PBO:0069836"}


id: GO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta-adrenergic receptors; the activity involves transmitting the signal to the Gs alpha subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:cb","GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor activity","termid":"GO:0004935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta-adrenergic receptor activity","synonyms":[{"name":"beta adrenoceptor","type":"exact"}],"termid":"GO:0004939"}


id: PBO:0046527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum oxidoreductase 1 beta","termid":"PBO:0046527"}


id: PBO:0066778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 76","termid":"PBO:0066778"}


id: GO:0043515
data:
  {"annotated_genes":["SJAG_00684"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114416],"is_not":false,"summary":null,"term":"GO:0043515"}]},"cv_name":"molecular_function","definition":"Binding to a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"kinetochore binding","references_by_uniquename":{"PMID:32109380":null},"termid":"GO:0043515","terms_by_termid":{"GO:0043515":null}}


id: PBO:0024857
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex binds a 3' overhang and translocates along single-stranded DNA in the 3' to 5' direction","termid":"PBO:0024857"}


id: PBO:0027539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_S-phase_DNA_damage_checkpoint_signaling","termid":"PBO:0027539"}


id: PBO:0077334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 71","termid":"PBO:0077334"}


id: PBO:0079539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase 1 like 1","termid":"PBO:0079539"}


id: PBO:0072198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 15","termid":"PBO:0072198"}


id: GO:0071851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071851)","synonyms":[{"name":"G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:0071851"}


id: GO:0034400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid found in senescing, formerly green tissues that is derived from a chloroplast that undergoes an organized developmental program of senescence.","definition_xrefs":["PMID:12654863","PMID:24668747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"gerontoplast","termid":"GO:0034400"}


id: GO:0019662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fermentation that does not include the anaerobic conversion of glucose to pyruvate via the glycolytic pathway.","definition_xrefs":["GOC:jl","MetaCyc:Fermentation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"non-glycolytic fermentation","termid":"GO:0019662"}


id: GO:0034809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene-cis-4,5-dihydrodiol = 4,5-dihydroxybenzo(a)pyrene + H2.","definition_xrefs":["UM-BBD_reactionID:r1127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzo(a)pyrene-cis-4,5-dihydrodiol dehydrogenase activity","termid":"GO:0034809"}


id: FYECO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cerulenin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cerulenin","termid":"FYECO:0000336"}


id: PBO:0071716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 14","termid":"PBO:0071716"}


id: GO:0008390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + donor-H2 + O2 = 16-alpha-hydroxytestosterone + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"testosterone 16-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2B10","type":"narrow"},{"name":"cytochrome P450 CYP2B9","type":"narrow"},{"name":"cytochrome P450 CYP2D10","type":"narrow"},{"name":"cytochrome P450 CYP2D11","type":"narrow"},{"name":"cytochrome P450 CYP2D9","type":"narrow"}],"termid":"GO:0008390"}


id: PBO:0040529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-2-microglobulin regulator","termid":"PBO:0040529"}


id: PBO:0044626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dachsous cadherin-related 1","termid":"PBO:0044626"}


id: FYPO:0001097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amitrole. Cells stop growing (and may die) at a concentration of amitrole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to amitrole","synonyms":[{"name":"hypersensitive to amitrole","type":"exact"},{"name":"sensitive to 3-amino-1,2,4-triazole","type":"exact"},{"name":"sensitive to amitrole during mitotic cell cycle","type":"related"},{"name":"sensitive to amitrole during vegetative growth","type":"exact"}],"termid":"FYPO:0001097"}


id: PBO:0079698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBL7 divergent transcript","termid":"PBO:0079698"}


id: PBO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 10","termid":"PBO:0052686"}


id: PBO:0045911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 7","termid":"PBO:0045911"}


id: PBO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fission yeast Fun Thirty","termid":"PBO:0000960"}


id: PBO:0038664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase family member 2","termid":"PBO:0038664"}


id: PR:P87051
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11071:SF41","PRO:DNx","OMA:SCHPO00551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase ppi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.03","secondary_identifiers":["UniProtKB:P87051"],"synonyms":[{"name":"PPIase ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIL1","type":"exact"},{"name":"cyclophilin ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87051"}


id: PBO:0038734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7A","termid":"PBO:0038734"}


id: GO:0060995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the kidney over time, from its formation to the mature organ.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in kidney development","synonyms":[{"name":"cell-cell signalling involved in kidney development","type":"exact"}],"termid":"GO:0060995"}


id: PBO:0043446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 7","termid":"PBO:0043446"}


id: PBO:0035834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_asymmetric_septum","termid":"PBO:0035834"}


id: SO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The possible discontinuous stretch of DNA that is the combination of one or several TFRSs whose bound TFs work jointly in the regulation of a promoter. ","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"has_part","term_name":"transcription_factor_regulatory_site","termid":"SO:0002295"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFRS_module","synonyms":[{"name":"TFRS module","type":"exact"},{"name":"TFRS phrase","type":"exact"},{"name":"transcription factor regulatory site module","type":"exact"},{"name":"transcription factor regulatory site phrase","type":"exact"}],"termid":"SO:0002296"}


id: GO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamyl alcohol + NADP+ = cinnamaldehyde + NADPH + H+.","definition_xrefs":["EC:1.1.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cinnamyl-alcohol dehydrogenase activity","secondary_identifiers":["RHEA:10392","MetaCyc:CINNAMYL-ALCOHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"CAD activity","type":"broad"},{"name":"cinnamyl alcohol dehydrogenase activity","type":"related"},{"name":"cinnamyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0045551"}


id: SO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA that is transcribed from a long terminal repeat.","definition_xrefs":["PMID:24256266","PomBase:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long_terminal_repeat_transcript","synonyms":[{"name":"LTR transcript","type":"exact"},{"name":"long terminal repeat transcript","type":"exact"}],"termid":"SO:0002208"}


id: GO:0098905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell of the bundle of His. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"bundle of His cell action potential","termid":"GO:0086043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bundle of His cell action potential","synonyms":[{"name":"regulation of bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0098905"}


id: PBO:0050374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 77","termid":"PBO:0050374"}


id: GO:0047785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + cortisol = adenosine 3',5'-diphosphate + cortisol 21-sulfate + H+.","definition_xrefs":["EC:2.8.2.18","RHEA:11884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cortisol sulfotransferase activity","secondary_identifiers":["MetaCyc:CORTISOL-SULFOTRANSFERASE-RXN","KEGG_REACTION:R02839"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:cortisol 21-sulfotransferase activity","type":"related"},{"name":"cortisol sulphotransferase activity","type":"exact"},{"name":"glucocorticoid sulfotransferase activity","type":"related"},{"name":"glucocorticosteroid sulfotransferase activity","type":"broad"}],"termid":"GO:0047785"}


id: PBO:0048194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPB1 antisense RNA 1","termid":"PBO:0048194"}


id: GO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ATP-dependent activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:21078962","PMID:22888405","PMID:22704558","PMID:22705370","PMID:22759634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"DNA/DNA annealing activity","termid":"GO:1990814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"ATP-dependent DNA/DNA annealing activity","synonyms":[{"name":"ATP-dependent DNA annealing activity","type":"related"},{"name":"DNA rewinding activity","type":"related"},{"name":"annealing helicase activity","type":"related"},{"name":"nucleoside-triphosphatase activity involved in DNA annealing","type":"exact"}],"termid":"GO:0036310"}


id: PR:Q09842
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.01","synonyms":[{"name":"Spom972h-pdp3","type":"exact"}],"termid":"PR:Q09842"}


id: PBO:0078509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 3","termid":"PBO:0078509"}


id: GO:0071966
data:
  {"annotated_genes":["SJAG_03587","SJAG_01288","SJAG_01028","SJAG_01171","SJAG_02192","SJAG_00424","SJAG_03057","SJAG_04184","SJAG_04327","SJAG_02222","SJAG_04483","SJAG_04666","SJAG_03646","SJAG_02278","SJAG_04868","SJAG_03013","SJAG_04864","SJAG_05285","SJAG_05001","SJAG_04236","SJAG_01290","SJAG_00610","SJAG_04771","SJAG_02916","SJAG_01835","SJAG_00218","SJAG_01453","SJAG_00620","SJAG_00876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72244,102086],"is_not":false,"summary":null,"term":"GO:0071966"},{"annotations":[90089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[104645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[84477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[87433,97013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[71604,77608,72946,73129,70819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[103155,104647,83864,87261,111005,101511,108417,87252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[103440,97429,97430,90708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[83320,88065],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[85188,90546,98310,88071],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the polysaccharides which make up the fungal-type cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"part_of","term_name":"fungal-type cell wall organization or biogenesis","termid":"GO:0071852"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00620":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04327":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_04868":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"fungal-type cell wall polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0071966","terms_by_termid":{"GO:0034217":null,"GO:0034232":null,"GO:0034412":null,"GO:0034413":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071966":null,"GO:0071970":null,"GO:0140748":null}}


id: GO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAP kinase activity","termid":"GO:0043406"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of JUN kinase activity","synonyms":[{"name":"positive regulation of JUNK activity","type":"exact"},{"name":"stimulation of JNK activity","type":"narrow"},{"name":"up regulation of JNK activity","type":"exact"},{"name":"up-regulation of JNK activity","type":"exact"},{"name":"upregulation of JNK activity","type":"exact"}],"termid":"GO:0043507"}


id: FYPO:0007580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during anaphase B of mitosis.","definition_xrefs":["PMID:19736319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during anaphase","termid":"FYPO:0005211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"decreased protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"decreased protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitotic anaphase B","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during anaphase B","type":"exact"}],"termid":"FYPO:0007580"}


id: GO:0050639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-desacetyltaxuyunnanin C + acetyl-CoA = CoA + taxuyunnanin C.","definition_xrefs":["RHEA:18837","EC:2.3.1.163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"10-hydroxytaxane O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07252","MetaCyc:2.3.1.163-RXN"],"synonyms":[{"name":"acetyl coenzyme A: 10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl coenzyme A:10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:taxan-10beta-ol O-acetyltransferase","type":"broad"}],"termid":"GO:0050639"}


id: GO:0003384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell, contributing to the process of gastrulation.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical constriction","termid":"GO:0003383"},{"relation_name":"part_of","term_name":"epithelial cell morphogenesis involved in gastrulation","termid":"GO:0003381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction involved in gastrulation","termid":"GO:0003384"}


id: PBO:0048756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase 1 homolog","termid":"PBO:0048756"}


id: PR:000044704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is dimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/InitMet-/Me:(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-dimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me2","type":"exact"}],"termid":"PR:000044704"}


id: GO:0044016
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94515],"is_not":false,"summary":null,"term":"GO:0044016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 4) = CoA + histone H3 N6-acetyl-L-lysine (position 4).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0034212","GO:0003674","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H3K4 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K4 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K4 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K4 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0044016","terms_by_termid":{"GO:0044016":null}}


id: GO:0030053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any member of a family of receptors that includes the major FK506 binding protein FKBP and cyclophilin. These two proteins are unrelated in amino-acid sequence, but both possess peptidyl-prolyl isomerase activity which is blocked by immunosuppressants that block signal-transduction pathways leading to T cell activation such as FK506 and rapamycin, which block FKBP, or cyclosporin A, which blocks cyclophilin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete immunophilin (obsolete GO:0030053)","synonyms":[{"name":"immunophilin","type":"exact"}],"termid":"GO:0030053"}


id: PBO:0040220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha tubulin acetyltransferase 1","termid":"PBO:0040220"}


id: PBO:0054481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1881","termid":"PBO:0054481"}


id: PBO:0069907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1198, pseudogene","termid":"PBO:0069907"}


id: PBO:0077700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenomodulin","termid":"PBO:0077700"}


id: GO:0060747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A parental behavior in which fertilized eggs are taken into the mouth and held until hatching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral incubation","termid":"GO:0060747"}


id: SO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that alters the level or amount of gene product produced. This high level term can be applied where the direction of level change (increased vs decreased gene product level) is unknown or not confirmed.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered_gene_product_level","synonyms":[{"name":"altered gene product level","type":"exact"},{"name":"altered transcription level","type":"exact"},{"name":"altered_transcription_level","type":"exact"}],"termid":"SO:0002314"}


id: FYPO:0005511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects any meiotic cell cycle checkpoint.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phenotype","termid":"FYPO:0000631"},{"relation_name":"is_a","term_name":"signal transduction phenotype","termid":"FYPO:0003478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint phenotype","synonyms":[{"name":"fission yeast meiotic cell cycle checkpoint phenotype","type":"exact"}],"termid":"FYPO:0005511"}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: GO:0005988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lactose metabolic process","synonyms":[{"name":"lactose metabolism","type":"exact"}],"termid":"GO:0005988"}


id: PBO:0083748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the TIM23 complex; tethers the import motor and regulatory factors (PAM complex) to the translocation channel (Tim23p-Tim17p core complex); TIM23 complex is short for the translocase of the inner mitochondrial membrane","termid":"PBO:0083748"}


id: PBO:0002870
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.21","termid":"PBO:0002870"}


id: GO:0015180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-alanine from one side of a membrane to the other. L-alanine is the L-enantiomer of 2-aminopropanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:go_curators","GOC:mah","GOC:mtg_transport","ISBN:0198506732","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-alanine transmembrane transporter activity","synonyms":[{"name":"L-alanine transporter activity","type":"broad"}],"termid":"GO:0015180"}


id: PBO:0080764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 3","termid":"PBO:0080764"}


id: GO:0031343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell killing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell killing","synonyms":[{"name":"activation of cell killing","type":"narrow"},{"name":"stimulation of cell killing","type":"narrow"},{"name":"up regulation of cell killing","type":"exact"},{"name":"up-regulation of cell killing","type":"exact"},{"name":"upregulation of cell killing","type":"exact"}],"termid":"GO:0031343"}


id: PBO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase 2","termid":"PBO:0048260"}


id: GO:0075230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the directed movement of a motile spore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spore movement on or near host (obsolete GO:0075230)","termid":"GO:0075230"}


id: GO:0018910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene metabolic process","synonyms":[{"name":"benzene metabolism","type":"exact"}],"termid":"GO:0018910"}


id: PBO:0078861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 9","termid":"PBO:0078861"}


id: FYPO:0004479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah","PMID:16928959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to salt stress","synonyms":[{"name":"decreased transcription from CDRE promoter during cellular response to salt stress","type":"exact"},{"name":"decreased transcription from CDRE promoter in response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to salt stress during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to salt stress","type":"exact"}],"termid":"FYPO:0004479"}


id: PBO:0031759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_MCM_complex_assembly","termid":"PBO:0031759"}


id: GO:0006789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bilirubin monoglucuronide or bilirubin diglucuronide, water-soluble derivatives of bilirubin.","definition_xrefs":["DOI:10.1016/0305-0491(80)90243-6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0044248"],"is_obsolete":false,"name":"bilirubin conjugation","termid":"GO:0006789"}


id: PBO:0067770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 70","termid":"PBO:0067770"}


id: PBO:0090322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Spo20/Sec14","termid":"PBO:0090322"}


id: PBO:0057004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 98","termid":"PBO:0057004"}


id: PR:Q9HFF4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.01","synonyms":[{"name":"Spom972h-ppk1","type":"exact"}],"termid":"PR:Q9HFF4"}


id: GO:1902333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication DNA ligation","termid":"GO:1902291"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"nuclear DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in DNA replication during S phase","type":"related"},{"name":"DNA ligation involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA ligation involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA ligation involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"GO:1902333"}


id: FYPO:0008070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 in centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:19394293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}


id: PBO:0039376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin like 1","termid":"PBO:0039376"}


id: GO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in a fully developed and mature organism, as described in insects.","definition_xrefs":["GOC:go_curators","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete adult feeding behavior (sensu Insecta) (obsolete GO:0030535)","synonyms":[{"name":"adult feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0030535"}


id: GO:1900417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of transmembrane transport.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:20404084"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900417)","termid":"GO:1900417"}


id: GO:0032443
data:
  {"annotated_genes":["SJAG_04018","SJAG_02104","SJAG_02044","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84340,101247],"is_not":false,"summary":null,"term":"GO:0032443"},{"annotations":[89519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[105181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032443","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: PATO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000131 relative size (obsolete PATO:0000131)","termid":"PATO:0000131"}


id: GO:0032280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that lacks an electron dense postsynaptic specialization. In vertebtrates, these occur primarily on dendrite shafts and neuronal cell bodies and involve persynapses containing clusters of predominantly flattened or elongated vesicles and are typcially inhibitory.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symmetric synapse","synonyms":[{"name":"Gray's type II synapse","type":"exact"}],"termid":"GO:0032280"}


id: PBO:0079801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B15","termid":"PBO:0079801"}


id: GO:0043766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + hydrogen sulfide + O-phospho-L-seryl-tRNA(Cys) = L-cysteinyl-tRNA(Cys) + phosphate.","definition_xrefs":["PMID:15790858","PMID:17110438","RHEA:25686","PMID:16380427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0140101","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"Sep-tRNA:Cys-tRNA synthase activity","secondary_identifiers":["EC:2.5.1.73","MetaCyc:RXN-10719"],"synonyms":[{"name":"O-phosphoseryl-tRNA:cysteinyl-tRNA synthase activity","type":"exact"},{"name":"Sep-tRNA:Cys-tRNA synthetase activity","type":"exact"},{"name":"SepCysS","type":"related"}],"termid":"GO:0043766"}


id: SO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 24-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_24_signal","synonyms":[{"name":"minus 24 signal","type":"related"}],"termid":"SO:0001674"}


id: GO:0099171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, acting in the presynapse that results in modulation of chemical synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"}


id: PBO:0109284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylitol dehydrogenase","termid":"PBO:0109284"}


id: PBO:0013084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L36, MrpL36/YmL36 (predicted)","termid":"PBO:0013084"}


id: GO:0035473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipase.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"lipase binding","termid":"GO:0035473"}


id: PBO:0051181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-72","termid":"PBO:0051181"}


id: MOD:01240
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of leucyl-arginyl-glycyl-glycine, the C-terminal tetrapeptide of ubiquitin.","definition_xrefs":["PubMed:10504701","Unimod:535"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitination signature tetrapeptidyl lysine","synonyms":[{"name":"LeuArgGlyGly","type":"related"},{"name":"Ubiquitination","type":"related"}],"termid":"MOD:01240"}


id: PBO:0087326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorbitol dehydrogenase; protein sequence is 99% identical to the Sor1p sorbitol dehydrogenase","termid":"PBO:0087326"}


id: MOD:02034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(3) HexNAc(6)","definition_xrefs":["PubMed:33135055","Unimod:1781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dHex1Hex3HexNAc6 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(3) HexNAc(6)","type":"related"}],"termid":"MOD:02034"}


id: SO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone modification site where ubiquitin may be added.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_modification","termid":"SO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_ubiqitination_site","synonyms":[{"name":"histone ubiquitination site","type":"related"}],"termid":"SO:0001716"}


id: PR:O13788
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr1 gene.","definition_xrefs":["UniProtKB:O13788","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.10","synonyms":[{"name":"Spom972h-ssr1","type":"exact"}],"termid":"PR:O13788"}


id: FYPO:0001714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal malate import","termid":"FYPO:0001713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased malate import","synonyms":[{"name":"decreased malate import across plasma membrane","type":"exact"},{"name":"decreased malate import during mitotic cell cycle","type":"related"},{"name":"decreased malate import during vegetative growth","type":"exact"},{"name":"decreased malate import into cell","type":"exact"},{"name":"decreased malate uptake","type":"exact"},{"name":"decreased malic acid import","type":"related"},{"name":"reduced malate import","type":"exact"}],"termid":"FYPO:0001714"}


id: PBO:0028813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_centromeric_heterochromatin","termid":"PBO:0028813"}


id: PBO:0071394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31","termid":"PBO:0071394"}


id: PBO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn3","termid":"PBO:0003302"}


id: PBO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 10","termid":"PBO:0047177"}


id: GO:0010104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ethylene (ethene) signal transduction.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorelay signal transduction system","termid":"GO:0070297"},{"relation_name":"regulates","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ethylene-activated signaling pathway","synonyms":[{"name":"regulation of ethene mediated signaling pathway","type":"exact"},{"name":"regulation of ethene mediated signalling pathway","type":"exact"},{"name":"regulation of ethylene mediated signaling pathway","type":"related"},{"name":"regulation of ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0010104"}


id: PBO:0041997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 43","termid":"PBO:0041997"}


id: PBO:0042241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 4","termid":"PBO:0042241"}


id: GO:0038098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a bone morphogenetic protein (BMP) in the extracellular region, and inhibiting BMP signaling by preventing BMP from binding to its cell surface receptor.","definition_xrefs":["PMID:19855014","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of BMP signaling pathway","termid":"GO:0030514"},{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of BMP from receptor via BMP binding","synonyms":[{"name":"extracellular sequestering of BMP","type":"broad"},{"name":"extracellular sequestering of bone morphogenetic protein","type":"broad"}],"termid":"GO:0038098"}


id: GO:0019507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridine, a nitrogenous base (C5H5N) obtained from the distillation of bone oil or coal tar, and by the decomposition of certain alkaloids, as a colorless liquid with a peculiar pungent odor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine metabolic process","synonyms":[{"name":"pyridine metabolism","type":"exact"}],"termid":"GO:0019507"}


id: PBO:0070899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 7","termid":"PBO:0070899"}


id: PBO:0060342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIB","termid":"PBO:0060342"}


id: GO:0060589
data:
  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to and modulates the activity of an NTPase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator 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regulator activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21873635":null},"synonyms":[{"name":"NTPase regulator activity","type":"exact"}],"termid":"GO:0060589","terms_by_termid":{"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0005095":null,"GO:0005096":null,"GO:0030695":null}}


id: MOD:01201
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-heptosyl-L-lysine.","definition_xrefs":["Unimod:490#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-heptosyl-L-lysine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01201"}


id: PBO:0057889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3193","termid":"PBO:0057889"}


id: PBO:0084384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity glucose transporter of the major facilitator superfamily; expression is induced by Hxk2p in the presence of glucose and repressed by Rgt1p when glucose is limiting; HXT1 has a paralog, HXT6, what arose from the whole genome duplication","termid":"PBO:0084384"}


id: PBO:0048549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G elongation factor mitochondrial 1","termid":"PBO:0048549"}


id: GO:0016423
data:
  {"annotated_genes":["SJAG_04993","SJAG_01269","SJAG_04181","SJAG_04680","SJAG_00886","SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99590,102654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160102"},{"annotations":[102655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160104"},{"annotations":[102656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160103"},{"annotations":[93419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106340"},{"annotations":[96884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052906"},{"annotations":[71436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008176"},{"annotations":[94941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052905"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine in tRNA = S-adenosyl-L-homocysteine + tRNA containing methylguanine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00886":null,"SJAG_01269":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003824","GO:0140101","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA (guanine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0016424"],"synonyms":[{"name":"tRNA (guanosine) methyltransferase activity","type":"exact"}],"termid":"GO:0016423","terms_by_termid":{"GO:0008176":null,"GO:0052905":null,"GO:0052906":null,"GO:0106340":null,"GO:0160102":null,"GO:0160103":null,"GO:0160104":null}}


id: GO:1900047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"negatively_regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemostasis","synonyms":[{"name":"down regulation of hemostasis","type":"exact"},{"name":"down-regulation of hemostasis","type":"exact"},{"name":"downregulation of hemostasis","type":"exact"},{"name":"inhibition of hemostasis","type":"narrow"}],"termid":"GO:1900047"}


id: PBO:0025452
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III deficiency","termid":"PBO:0025452"}


id: GO:1901156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving neomycin.","definition_xrefs":["MetaCyc:PWY-7016","GOC:TermGenie","GOC:yaf","UniPathway:UPA00969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"neomycin metabolic process","synonyms":[{"name":"neomycin metabolism","type":"exact"}],"termid":"GO:1901156"}


id: PR:O74767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10805:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.05","secondary_identifiers":["UniProtKB:O74767"],"synonyms":[{"name":"SPBC24C6.05","type":"related"},{"name":"Spom972h-COPE","type":"exact"},{"name":"epsilon-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"epsilon-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74767"}


id: FYPO:0002126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002125"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002126"}


id: SO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase sigma 54 binds, to begin transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma54_element","synonyms":[{"name":"<new synonym>","type":"related"},{"name":"bacterial RNA polymerase promoter sigma54","type":"exact"}],"termid":"SO:0001672"}


id: FYPO:0007793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which an increase in RNA level that occurs as part of a cellular response to oxidative stress begins later than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:10428959","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress during vegetative growth","termid":"FYPO:0001340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of increase in RNA level during cellular response to oxidative stress","synonyms":[{"name":"delayed increase in RNA level during cellular response to oxidative stress","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"delayed onset of increase in RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"delayed onset of increase in RNA level in response to oxidative stress","type":"exact"},{"name":"delayed onset of increase in transcript level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007793"}


id: PBO:0067384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 488, pseudogene","termid":"PBO:0067384"}


id: PBO:0054425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1821","termid":"PBO:0054425"}


id: PATO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented obliquely relative to the long axis of the bearer.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obliquely striated","termid":"PATO:0002479"}


id: PBO:0054710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2119","termid":"PBO:0054710"}


id: PBO:0055604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3042","termid":"PBO:0055604"}


id: GO:1903522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood circulation.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:10659969","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood circulation","synonyms":[{"name":"regulation of hemolymph circulation","type":"related"}],"termid":"GO:1903522"}


id: GO:0048792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of a neurotransmitter into the synaptic cleft, where the release step is independent of the presence of calcium ions (Ca2+). The neurotransmitter is contained within a membrane-bounded vesicle, and is released by fusion of the vesicle with the presynaptic plasma membrane of a nerve cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"spontaneous exocytosis of neurotransmitter","synonyms":[{"name":"spontaneous synaptic vesicle exocytosis","type":"exact"}],"termid":"GO:0048792"}


id: PBO:0078659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 12-1","termid":"PBO:0078659"}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: PBO:0086252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that negatively regulates the SCF E3-ubiquitin ligase; regulates by interacting with and preventing neddyation of the cullin subunit, Cdc53p; longevity determinant that is preferentially expressed in young cells; similar to mammalian Cand1","termid":"PBO:0086252"}


id: PBO:0057814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3135a","termid":"PBO:0057814"}


id: MOD:00709
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of L-methionine residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur oxygenated L-methionine","synonyms":[{"name":"SOxyMet","type":"exact"}],"termid":"MOD:00709"}


id: GO:0010755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"regulation of plasminogen activation","termid":"GO:0010755"}


id: PBO:0002971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multidomain vesicle coat component Sec16 (predicted)","termid":"PBO:0002971"}


id: PBO:0086284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in cellular adhesion and filamentous growth; also endosome-to-vacuole sorting; similar to Tmn3p; member of Transmembrane Nine family of proteins with 9 transmembrane segments; EMP70 has a paralog, TMN2, that arose from the whole genome duplication","termid":"PBO:0086284"}


id: PBO:0084092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Arf proteins; promotes activation of Arl1p, which recruits Imh1p to the Golgi; involved in vesicular transport; member of the Sec7-domain family; contains a PH domain","termid":"PBO:0084092"}


id: PBO:0048688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 antisense RNA 1","termid":"PBO:0048688"}


id: GO:0016768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine.","definition_xrefs":["EC:2.5.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"spermine synthase activity","secondary_identifiers":["RHEA:19973","MetaCyc:SPERMINE-SYNTHASE-RXN","Reactome:R-HSA-351210"],"synonyms":[{"name":"S-adenosylmethioninamine:spermidine 3-aminopropyltransferase activity","type":"related"},{"name":"spermidine aminopropyltransferase activity","type":"related"},{"name":"spermine synthetase activity","type":"related"}],"termid":"GO:0016768"}


id: PR:Q9P7G8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0382 inner membrane protein YgdD that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0382 membrane protein C1782.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.12c","secondary_identifiers":["UniProtKB:Q9P7G8"],"synonyms":[{"name":"Spom972h-ygdD","type":"exact"}],"termid":"PR:Q9P7G8"}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: FYECO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arginine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arginine","termid":"FYECO:0000082"}


id: PBO:0086152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with ribosomes; involved in TOR signaling; binds G4 quadruplex and purine motif triplex nucleic acid; helps maintain telomere structure; protein abundance increases in response to DNA replication stress; serves as a ribosome preservation factor both during quiescence and recovery","termid":"PBO:0086152"}


id: PBO:0051306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR-4 (pseudogene)","termid":"PBO:0051306"}


id: PBO:0079977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 15","termid":"PBO:0079977"}


id: PBO:0063972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 6","termid":"PBO:0063972"}


id: GO:0015075
data:
  {"annotated_genes":["SJAG_04714","SJAG_02504","SJAG_04955","SJAG_04122","SJAG_05229","SJAG_04737","SJAG_00542","SJAG_01447","SJAG_04246","SJAG_04867","SJAG_04028","SJAG_01669","SJAG_02023","SJAG_MIT03","SJAG_00048","SJAG_01817","SJAG_04757","SJAG_04675","SJAG_03960","SJAG_01397","SJAG_07007","SJAG_00915","SJAG_MIT37","SJAG_MIT04","SJAG_04068","SJAG_00328","SJAG_05294","SJAG_03925","SJAG_04506","SJAG_04185","SJAG_02105","SJAG_00976","SJAG_01119","SJAG_01129","SJAG_03079","SJAG_03516","SJAG_01406","SJAG_05204","SJAG_04258","SJAG_00836","SJAG_01493","SJAG_00985","SJAG_02564","SJAG_04260","SJAG_05629","SJAG_02473","SJAG_01400","SJAG_03528","SJAG_01973","SJAG_01941","SJAG_01639","SJAG_00222","SJAG_MIT13","SJAG_03820","SJAG_04698","SJAG_01990","SJAG_01007","SJAG_01355","SJAG_01471","SJAG_MIT09","SJAG_04830","SJAG_03895","SJAG_04167","SJAG_02399","SJAG_04588","SJAG_01541","SJAG_MIT20","SJAG_03595","SJAG_03401","SJAG_01168","SJAG_01077","SJAG_00755","SJAG_02322","SJAG_MIT15","SJAG_04668","SJAG_01090","SJAG_03490","SJAG_01803","SJAG_03608","SJAG_02019","SJAG_03406","SJAG_03866","SJAG_01353","SJAG_00057","SJAG_04096","SJAG_02484","SJAG_04892","SJAG_00438","SJAG_00212","SJAG_03114","SJAG_01913","SJAG_02578","SJAG_01435","SJAG_00136","SJAG_02877","SJAG_01490","SJAG_03850","SJAG_02782","SJAG_02779","SJAG_00133","SJAG_00211","SJAG_02463","SJAG_04015","SJAG_02532","SJAG_04673","SJAG_00601","SJAG_04616","SJAG_01190","SJAG_02646","SJAG_03606","SJAG_02598","SJAG_04905","SJAG_02958","SJAG_02883","SJAG_02968","SJAG_07003","SJAG_00516","SJAG_07006","SJAG_03337","SJAG_05342","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86334],"is_not":false,"summary":null,"term":"GO:0015075"},{"annotations":[104020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[107614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[74580,71006,78670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[75037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015086"},{"annotations":[109670,72370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[104715,91583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015085"},{"annotations":[72806,78453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[77278,86883,70461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[72762,72984,71110,74374,75563,72953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[70544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[83738,109816,96987,62355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005375"},{"annotations":[114102,87618,109463,83986,114123,103643,114147,84977,110649,109882,111991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[70588,99251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015093"},{"annotations":[77795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[73894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[88096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"},{"annotations":[112357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[111189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044750"},{"annotations":[70790,72256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140107"},{"annotations":[96179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[99629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000006"},{"annotations":[93646,108468,109042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005381"},{"annotations":[74052,56726,70486,75035,76474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015095"},{"annotations":[97163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[73327,75038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005384"},{"annotations":[86884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[99217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[91291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[65934,61799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008509"},{"annotations":[73289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008324"},{"annotations":[72100,72795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":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the transfer of an ion from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter 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ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21873635":null},"synonyms":[{"name":"ion transmembrane transporter activity","type":"broad"},{"name":"ion transporter 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id: GO:0046201
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanate, NCO-, the anion of cyanic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanate metabolic process","termid":"GO:0009439"},{"relation_name":"is_a","term_name":"cellular nitrogen compound biosynthetic process","termid":"GO:0044271"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyanate biosynthetic process","synonyms":[{"name":"cyanate anabolism","type":"exact"},{"name":"cyanate biosynthesis","type":"exact"},{"name":"cyanate formation","type":"exact"},{"name":"cyanate synthesis","type":"exact"}],"termid":"GO:0046201"}


id: GO:0051985
data:
  {"annotated_genes":["SJAG_02451","SJAG_00883","SJAG_02336","SJAG_04999","SJAG_00460","SJAG_04884","SJAG_01837","SJAG_04699","SJAG_01082","SJAG_03681","SJAG_03126","SJAG_03048","SJAG_03327","SJAG_01330","SJAG_04259","SJAG_01515","SJAG_03353","SJAG_01297","SJAG_02169","SJAG_01679","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103613,95103,86433,109030,107238,111088,109504,99348,102618],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[109730,101718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[111844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[110741,101720,105239,94965,97286,109734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[97838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[94244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[98725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[89827],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109035],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[111850],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[96838],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of chromosome segregation","termid":"GO:0051983"},{"relation_name":"negatively_regulates","term_name":"chromosome segregation","termid":"GO:0007059"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromosome segregation","type":"exact"},{"name":"down-regulation of chromosome segregation","type":"exact"},{"name":"downregulation of chromosome segregation","type":"exact"},{"name":"inhibition of chromosome segregation","type":"narrow"}],"termid":"GO:0051985","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902424":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:2000816":null}}


id: PR:O14186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 24 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C4F8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.11","secondary_identifiers":["UniProtKB:O14186"],"synonyms":[{"name":"Spom972h-WDR24","type":"exact"}],"termid":"PR:O14186"}


id: GO:0061863
data:
  {"annotated_genes":["SJAG_02624","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113254,113757],"is_not":false,"summary":null,"term":"GO:0061863"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of tubulin dimers to the plus end of a microtubule. The reaction is reversable depending on the availability of dimers.","definition_xrefs":["PMID:27872152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"microtubule plus end polymerase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061863","terms_by_termid":{"GO:0061863":null}}


id: PBO:0004536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like (predicted)","termid":"PBO:0004536"}


id: PBO:0039184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKAP13 antisense RNA 1","termid":"PBO:0039184"}


id: PBO:0056075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6E (pseudogene)","termid":"PBO:0056075"}


id: PBO:0072435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 9","termid":"PBO:0072435"}


id: PBO:0066058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 3","termid":"PBO:0066058"}


id: PR:Q9P7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.06 gene.","definition_xrefs":["UniProtKB:Q9P7J9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.06","synonyms":[{"name":"Spom972h-SPCC24B10.06","type":"exact"}],"termid":"PR:Q9P7J9"}


id: PBO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase pseudogene 1","termid":"PBO:0045088"}


id: PBO:0090862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Fnx1","termid":"PBO:0090862"}


id: PBO:0030368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_origin_firing_efficiency","termid":"PBO:0030368"}


id: PBO:0004674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gyrate atrophy of choroid and retina","termid":"PBO:0004674"}


id: PBO:0082806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U4/U6-U5 snRNP complex; involved in second catalytic step of splicing; participates in spliceosomal assembly through its interaction with U1 snRNA; largest and most evolutionarily conserved protein of the spliceosome; mutations in human ortholog, PRPF8, cause Retinitis pigmentosa and missplicing in Myelodysplastic syndrome; mouse ortholog interacts with androgen receptor and may have a role in prostate cancer","termid":"PBO:0082806"}


id: PR:Q10145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab3 gene.","definition_xrefs":["UniProtKB:Q10145","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C3H8.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.09c","synonyms":[{"name":"Spom972h-nab3","type":"exact"}],"termid":"PR:Q10145"}


id: GO:0098877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor to the plasma membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"neurotransmitter receptor transport to plasma membrane","termid":"GO:0098877"}


id: GO:0015445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ag+(in) = ADP + phosphate + Ag+(out).","definition_xrefs":["RHEA:14733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silver ion transmembrane transporter activity","termid":"GO:0015080"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type silver transporter activity","secondary_identifiers":["MetaCyc:3.6.3.53-RXN","EC:7.2.2.15"],"synonyms":[{"name":"ATP phosphohydrolase (Ag+-exporting)","type":"related"},{"name":"Ag+-exporting ATPase activity","type":"related"},{"name":"silver exporting ATPase activity","type":"exact"},{"name":"silver transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"silver-exporting ATPase activity","type":"related"}],"termid":"GO:0015445"}


id: PBO:0066180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 5","termid":"PBO:0066180"}


id: GO:2000047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-cell adhesion mediated by cadherin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000047"}


id: _global:started_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is strted_by Y if Y is part_of X and X and Y share a 5' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"started_by","termid":"_global:started_by"}


id: PBO:0078484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-4","termid":"PBO:0078484"}


id: GO:0018405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Keratan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and threonine residues.","definition_xrefs":["RESID:AA0247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-keratan sulfate linkage via keratan sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","synonyms":[{"name":"protein-keratan sulphate linkage via keratan sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","type":"exact"}],"termid":"GO:0018405"}


id: FYPO:0004295
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[114567],"is_not":false,"summary":null,"term":"FYPO:0004295"},{"annotations":[114470,114469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype characterized by the presence of more than one septum in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"septated cell","termid":"FYPO:0004296"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_01143"],"name":"multiseptate cell","references_by_uniquename":{"PMID:25866389":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_00118","SJAG_04551"],"single_locus_genotype_uniquenames":["mid1delta","pmk1delta","mid2delta"],"termid":"FYPO:0004295","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000207":null,"FYPO:0000118":null,"FYPO:0004295":null,"FYPO_EXT:0000002":null}}


id: PBO:0046910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E2","termid":"PBO:0046910"}


id: PBO:0067190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 252, pseudogene","termid":"PBO:0067190"}


id: PBO:0062709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily H member 1","termid":"PBO:0062709"}


id: GO:1904957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dopaminergic neuron differentiation","termid":"GO:1904339"},{"relation_name":"is_a","term_name":"regulation of midbrain dopaminergic neuron differentiation","termid":"GO:1904956"},{"relation_name":"negatively_regulates","term_name":"midbrain dopaminergic neuron differentiation","termid":"GO:1904948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of midbrain dopaminergic neuron differentiation","synonyms":[{"name":"down regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of mDA neuron differentiation","type":"exact"},{"name":"down regulation of midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of mDA neuron differentiation","type":"exact"},{"name":"down-regulation of midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of mDA neuron differentiation","type":"exact"},{"name":"downregulation of midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"inhibition of DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of mDA neuron differentiation","type":"narrow"},{"name":"inhibition of midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of midbrain dopaminergic neuron production","type":"narrow"},{"name":"negative regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of mDA neuron differentiation","type":"exact"},{"name":"negative regulation of midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904957"}


id: PBO:0029148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029148"}


id: GO:0009912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of auditory hair cells is acquired and determined.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell fate commitment","termid":"GO:0060120"},{"relation_name":"part_of","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate commitment","synonyms":[{"name":"auditory hair cell fate commitment","type":"exact"}],"termid":"GO:0009912"}


id: GO:0048701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase.","definition_xrefs":["GOC:jid","GOC:dsf","PMID:16049113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system morphogenesis","termid":"GO:0048704"},{"relation_name":"part_of","term_name":"cranial skeletal system development","termid":"GO:1904888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic cranial skeleton morphogenesis","synonyms":[{"name":"embryonic cranium morphogenesis","type":"exact"}],"termid":"GO:0048701"}


id: PBO:0051390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 7","termid":"PBO:0051390"}


id: PBO:0053301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-7 homolog C, crumbs cell polarity complex component","termid":"PBO:0053301"}


id: PBO:0053264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 1","termid":"PBO:0053264"}


id: GO:0018449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-1-phenylethanol = acetophenone + H2.","definition_xrefs":["UM-BBD_reactionID:r0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-phenylethanol dehydrogenase activity","termid":"GO:0018449"}


id: PR:O14169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pgc1 gene.","definition_xrefs":["UniProtKB:O14169","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.02c","synonyms":[{"name":"Spom972h-pgc1","type":"exact"}],"termid":"PR:O14169"}


id: PBO:0080062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 31","termid":"PBO:0080062"}


id: PBO:0086064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that influences nuclear pore distribution; co-purifies with ribosomes; contains a GYF domain, which bind proline-rich sequences; deletion extends chronological lifespan; SYH1 has a paralog, SMY2, that arose from the whole genome duplication","termid":"PBO:0086064"}


id: PBO:0030438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA-Asp_C48,_C49,_C60,_C61_and_C62_methylation","termid":"PBO:0030438"}


id: GO:0014821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within phasic smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the phasic smooth muscle, the muscle contraction occurs without an ordered sarcomeric structure. Phasic smooth muscle contraction occurs in a series of discrete contractions and relaxations.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phasic smooth muscle contraction","termid":"GO:0014821"}


id: GO:0061855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuroblast migration.","definition_xrefs":["PMID:23149556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of neuroblast migration","termid":"GO:0061853"},{"relation_name":"negatively_regulates","term_name":"neuroblast migration","termid":"GO:0097402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast migration","termid":"GO:0061855"}


id: PBO:0030035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_upon_segregation_during_meiotic_cell_cycle","termid":"PBO:0030035"}


id: GO:0099536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling to, from or within a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic signaling","termid":"GO:0099536"}


id: GO:0035349
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a membrane. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transport","termid":"GO:0015880"},{"relation_name":"is_a","term_name":"adenosine 3',5'-bisphosphate transmembrane transport","termid":"GO:0071106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"coenzyme A transmembrane transport","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"coenzyme A membrane transport","type":"exact"}],"termid":"GO:0035349","terms_by_termid":{"GO:1990559":null}}


id: PBO:0027717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0027717"}


id: CHEBI:23414
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal sulfate compound having copper(2+) as the counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(2+) sulfate","termid":"CHEBI:23414"}


id: PBO:0045973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHBP1 antisense RNA 1","termid":"PBO:0045973"}


id: PBO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit (predicted)","termid":"PBO:0001554"}


id: PBO:0081255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 25","termid":"PBO:0081255"}


id: PR:P50521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hxk2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.07c","synonyms":[{"name":"Spom972h-hxk2","type":"exact"}],"termid":"PR:P50521"}


id: PBO:0068665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 46, pseudogene","termid":"PBO:0068665"}


id: GO:0098963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic transport of ribonucleoprotein complex","termid":"GO:0098961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dendritic transport of messenger ribonucleoprotein complex","synonyms":[{"name":"dendritic transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0098963"}


id: PBO:0076729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcobalamin 2","termid":"PBO:0076729"}


id: PBO:0041379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5 3' UTR overlapping transcript 1","termid":"PBO:0041379"}


id: PBO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.56","termid":"PBO:0005017"}


id: PBO:0079772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 specific peptidase 2","termid":"PBO:0079772"}


id: PBO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p25.1)","termid":"PBO:0047888"}


id: FYPO:0001918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing trifluoperazine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on trifluoperazine","synonyms":[{"name":"normal cell population growth in presence of trifluoperazine","type":"exact"},{"name":"normal cell population growth on trifluoperazine","type":"exact"},{"name":"normal cellular response to trifluoperazine","type":"related"},{"name":"normal vegetative cell population growth on trifluoperazine","type":"exact"}],"termid":"FYPO:0001918"}


id: GO:0016551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The insertion into or deletion from an RNA molecule of nucleotide residues not encoded in DNA; takes place after transcription.","definition_xrefs":["PMID:11092837"],"gene_count":0,"genotype_count":0,"name":"obsolete posttranscriptional insertion or deletion editing (obsolete GO:0016551)","synonyms":[{"name":"posttranscriptional insertion or deletion editing","type":"exact"},{"name":"posttranscriptional insertion/deletion editing","type":"exact"}],"termid":"GO:0016551"}


id: GO:0019108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + NAD+ + H2O = an aromatic acid + NADH + H+.","definition_xrefs":["EC:1.2.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aryl-aldehyde dehydrogenase (NAD) activity","secondary_identifiers":["RHEA:11804","UM-BBD_reactionID:r0394","MetaCyc:ARYL-ALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"aryl-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0019108"}


id: PBO:0045907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 5","termid":"PBO:0045907"}


id: PBO:0004382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36","termid":"PBO:0004382"}


id: GO:1902970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA duplex unwinding involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"nuclear DNA replication DNA duplex unwinding","termid":"GO:1902320"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"premeiotic DNA replication DNA duplex unwinding","synonyms":[{"name":"DNA duplex unwinding involved in meiotic DNA replication","type":"exact"},{"name":"DNA duplex unwinding involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902970"}


id: PBO:0057204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374c","termid":"PBO:0057204"}


id: PBO:0091418
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELOVL3","termid":"PBO:0091418"}


id: PBO:0056284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotically associated long non coding RNA","termid":"PBO:0056284"}


id: GO:0009376
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses ATP-dependent protease activity; consists of an ATPase large subunit with homology to other ClpX family ATPases and a peptidase small subunit related to the proteasomal beta-subunits of eukaryotes. In the E. coli complex, a double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer.","definition_xrefs":["UniProt:P0A6H5","PMID:12670962","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"HslUV protease complex","synonyms":[{"name":"ClpYQ protease complex","type":"exact"}],"termid":"GO:0009376"}


id: PBO:0062970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 13","termid":"PBO:0062970"}


id: PBO:0066929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 231","termid":"PBO:0066929"}


id: FYPO:0000227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chromosome segregation phenotype observed in the vegetative growth phase of the life cycle in which one or more chromosome or minichromosome is not correctly segregated to either daughter cells during mitosis.","definition_xrefs":["PMID:20211136","PomBase:mah","PMID:11809834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000337"],"is_obsolete":false,"name":"chromosome loss during mitotic chromosome segregation","synonyms":[{"name":"chromosome loss during mitotic sister chromatid segregation","type":"exact"},{"name":"chromosome loss during segregation during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, chromosome loss","type":"exact"}],"termid":"FYPO:0000227"}


id: GO:0005047
data:
  {"annotated_genes":["SJAG_01759","SJAG_01558","SJAG_00360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72401,78322,89907],"is_not":false,"summary":null,"term":"GO:0005047"}]},"cv_name":"molecular_function","definition":"Binding to a signal recognition particle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_01558":null,"SJAG_01759":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"signal recognition particle binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"docking protein","type":"broad"},{"name":"signal recognition particle receptor","type":"narrow"}],"termid":"GO:0005047","terms_by_termid":{"GO:0005047":null}}


id: SO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The acceptor region of a two-piece tmRNA that when mature is charged at its 3' end with alanine. The tmRNA gene undergoes circular permutation in some groups of bacteria; processing of the transcripts from such a gene leaves the mature tmRNA in two pieces, base-paired together.","definition_xrefs":["Indiana:kw","doi:10.1093/nar/gkh795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tmRNA_region","termid":"SO:0000847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_acceptor_piece","synonyms":[{"name":"tmRNA acceptor piece","type":"exact"}],"termid":"SO:0000770"}


id: GO:0051068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dihydrolipoamide, the reduced form of lipoamide, produced as an intermediate in the reactions in which lipoamide acts as a cofactor.","definition_xrefs":["ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dihydrolipoamide metabolic process","synonyms":[{"name":"dihydrolipoamide metabolism","type":"exact"},{"name":"dihydrolipoamide reduction","type":"narrow"},{"name":"dihydrothioctamide metabolic process","type":"exact"},{"name":"dihydrothioctamide metabolism","type":"exact"}],"termid":"GO:0051068"}


id: PBO:0069724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1005, pseudogene","termid":"PBO:0069724"}


id: PR:Q9UTA8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.10 gene.","definition_xrefs":["UniProtKB:Q9UTA8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase-like C25B8.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.10","synonyms":[{"name":"Spom972h-SPAC25B8.10","type":"exact"}],"termid":"PR:Q9UTA8"}


id: PBO:0058544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6090","termid":"PBO:0058544"}


id: PBO:0047265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 245 member B","termid":"PBO:0047265"}


id: PBO:0043937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRTC1 pseudogene 1","termid":"PBO:0043937"}


id: GO:0060172
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75701],"is_not":false,"summary":null,"term":"GO:0060172"}]},"cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of an astral microtubule. An astral microtubule is any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"},{"relation_name":"is_a","term_name":"astral microtubule organization","termid":"GO:0030953"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"astral microtubule depolymerization","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0060172","terms_by_termid":{"GO:0060172":null}}


id: PBO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfiredoxin","termid":"PBO:0003156"}


id: GO:1900062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of replicative cell aging.","definition_xrefs":["GOC:TermGenie","PMID:17914901"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of replicative cell aging (obsolete GO:1900062)","synonyms":[{"name":"regulation of replicative cell ageing","type":"exact"}],"termid":"GO:1900062"}


id: GO:0019824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P6 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content, and are equivalent to mature peroxisomes.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"P6 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019824"}


id: SO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_right_handed_type_one","secondary_identifiers":["BS:00207"],"synonyms":[{"name":"asx turn type right handed type one","type":"exact"},{"name":"asx_turn_ir","type":"exact"}],"termid":"SO:0001132"}


id: GO:1903149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any adenine transmembrane transporter activity that is involved in adenine import into cell.","definition_xrefs":["GOC:dos","GO_REF:0000061","ISBN:0-8249-3695-6","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine transmembrane transporter activity involved in adenine import into cell (obsolete GO:1903149)","synonyms":[{"name":"adenine transmembrane transporter activity involved in adenine import into cell","type":"exact"}],"termid":"GO:1903149"}


id: GO:0005073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete common-partner SMAD protein (obsolete GO:0005073)","synonyms":[{"name":"common-partner SMAD protein","type":"exact"}],"termid":"GO:0005073"}


id: GO:0019802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclization of glutamine to yield an L-glutamimide residue at the C-terminus of an excised intein during protein splicing.","definition_xrefs":["RESID:AA0303","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"part_of","term_name":"intein-mediated protein splicing","termid":"GO:0016539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0051604","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"cyclization of glutamine involved in intein-mediated protein splicing","synonyms":[{"name":"cyclization of glutamine, during protein splicing","type":"related"}],"termid":"GO:0019802"}


id: GO:0071874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a norepinephrine stimulus. Norepinephrine is a catecholamine that has the formula C8H11NO3; it acts as a hormone, and as a neurotransmitter in most of the sympathetic nervous system.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to catecholamine stimulus","termid":"GO:0071870"},{"relation_name":"is_a","term_name":"response to norepinephrine","termid":"GO:0071873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to norepinephrine stimulus","synonyms":[{"name":"cellular response to noradrenaline stimulus","type":"exact"}],"termid":"GO:0071874"}


id: PBO:0077127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TINAG antisense RNA 1","termid":"PBO:0077127"}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["PMID:2719476","GOC:jl","PMID:8423010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: PBO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methytransferase (predicted)","termid":"PBO:0005145"}


id: GO:0001962
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106017,106023],"is_not":false,"summary":null,"term":"GO:0001962"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["PMID:10854427","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoglobotriaosylceramide synthase","type":"narrow"}],"termid":"GO:0001962","terms_by_termid":{"GO:0001962":null}}


id: GO:0047068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H(2) = 5,10-methylenetetrahydromethanopterin + H+.","definition_xrefs":["EC:1.12.98.2","RHEA:20017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N5,N10-methenyltetrahydromethanopterin hydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04455","GO:0016947","MetaCyc:H2-METHYLENE-THMPT-DEHYDRO-RXN"],"synonyms":[{"name":"5,10-methenyltetrahydromethanopterin hydrogenase activity","type":"related"},{"name":"H(2)-dependent methylene-H(4)MPT dehydrogenase activity","type":"related"},{"name":"H(2)-forming N(5),N(10)-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"},{"name":"H2-dependent methylene-H4MPT dehydrogenase activity","type":"related"},{"name":"H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"},{"name":"N(5),N(10)-methenyltetrahydromethanopterin hydrogenase activity","type":"related"},{"name":"N5,N10-methylenetetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"hydrogen:5,10-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"hydrogen:N(5),N(10)-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"hydrogen:N5,N10-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"nonmetal hydrogenase activity","type":"related"}],"termid":"GO:0047068"}


id: GO:1900074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular synaptic transmission.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"is_a","term_name":"regulation of neuromuscular synaptic transmission","termid":"GO:1900073"},{"relation_name":"negatively_regulates","term_name":"neuromuscular synaptic transmission","termid":"GO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of neuromuscular synaptic transmission","synonyms":[{"name":"down regulation of neuromuscular synaptic transmission","type":"related"},{"name":"down-regulation of neuromuscular synaptic transmission","type":"related"},{"name":"downregulation of neuromuscular synaptic transmission","type":"related"},{"name":"inhibition of neuromuscular synaptic transmission","type":"related"}],"termid":"GO:1900074"}


id: GO:0050025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + O2 + H2O = 2-oxoglutarate + NH3 + H2O2.","definition_xrefs":["EC:1.4.3.11","MetaCyc:L-GLUTAMATE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-glutamate oxidase activity","secondary_identifiers":["RHEA:20728"],"synonyms":[{"name":"L-glutamate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"L-glutamic acid oxidase activity","type":"related"},{"name":"glutamate (acceptor) dehydrogenase activity","type":"related"},{"name":"glutamate oxidase activity","type":"related"},{"name":"glutamic acid oxidase activity","type":"related"},{"name":"glutamic dehydrogenase (acceptor)","type":"related"}],"termid":"GO:0050025"}


id: PBO:0087736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; binds single-stranded DNA and has ATPase activity; supports nucleolar function; S. pombe homolog forms a heterodimer with S. pombe Rad18p that is involved in DNA repair","termid":"PBO:0087736"}


id: PBO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joining chain of multimeric IgA and IgM pseudogene 1","termid":"PBO:0052005"}


id: PBO:0052055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANTR integral membrane protein","termid":"PBO:0052055"}


id: PBO:0044046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 3","termid":"PBO:0044046"}


id: PBO:0055941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 49","termid":"PBO:0055941"}


id: PBO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase C, Css1","termid":"PBO:0004202"}


id: PR:O94345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl8 gene.","definition_xrefs":["UniProtKB:O94345","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.13","synonyms":[{"name":"Spom972h-mrpl8","type":"exact"}],"termid":"PR:O94345"}


id: PBO:0053085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1C","termid":"PBO:0053085"}


id: GO:0032330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of cartilage development","termid":"GO:0061035"},{"relation_name":"regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte differentiation","termid":"GO:0032330"}


id: PBO:0077122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 1","termid":"PBO:0077122"}


id: PBO:0072826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival associated mitochondrial melanoma specific oncogenic non-coding RNA","termid":"PBO:0072826"}


id: PR:Q9Y7U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cca2 gene.","definition_xrefs":["UniProtKB:Q9Y7U9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.10","synonyms":[{"name":"CCA-adding enzyme 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cca2","type":"exact"},{"name":"tRNA CCA-pyrophosphorylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA adenylyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA nucleotidyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7U9"}


id: PBO:0069397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 657, pseudogene","termid":"PBO:0069397"}


id: GO:2000439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte extravasation","termid":"GO:2000437"},{"relation_name":"positively_regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte extravasation","termid":"GO:2000439"}


id: PBO:0003920
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds M-box 5'-ACAAT-3'","termid":"PBO:0003920"}


id: PBO:0066262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 2","termid":"PBO:0066262"}


id: GO:0102233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (cis)-crotonaldehyde + NADPH + H+ = butanal + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"crotonaldehyde redutase activity","secondary_identifiers":["MetaCyc:RXN-12292"],"termid":"GO:0102233"}


id: PBO:0055446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2877","termid":"PBO:0055446"}


id: PBO:0075861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 9, pseudogene","termid":"PBO:0075861"}


id: GO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol-1-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["EC:3.1.3.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"glycerol-1-phosphatase activity","secondary_identifiers":["MetaCyc:GLYCEROL-1-PHOSPHATASE-RXN","RHEA:11476"],"synonyms":[{"name":"alpha-glycerol phosphatase activity","type":"related"},{"name":"alpha-glycerophosphatase activity","type":"related"},{"name":"glycerol 3-phosphatase activity","type":"related"},{"name":"glycerol 3-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-3-phosphate phosphatase activity","type":"related"}],"termid":"GO:0000121"}


id: GO:0015842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The active transport of aminergic neurotransmitters into a synaptic vesicle. This import is fuelled by an electrochemical gradient across the vesicle membrane, established by the action proton pumps.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"neurotransmitter loading into synaptic vesicle","termid":"GO:0098700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"aminergic neurotransmitter loading into synaptic vesicle","termid":"GO:0015842"}


id: FYPO:0001511
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, cell shape is altered, and cell size remains normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001121"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000257","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"inviable vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"inviable lumpy cell","type":"related"},{"name":"inviable vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"inviable vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"inviable vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"inviable, abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lethal; vegetative cell, abnormal cell shape, normal cell size","type":"exact"}],"termid":"FYPO:0001511"}


id: PBO:0081055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 12","termid":"PBO:0081055"}


id: PR:Q9US15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC607.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0653 protein C607.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.02c","synonyms":[{"name":"Spom972h-SPAC607.02c","type":"exact"}],"termid":"PR:Q9US15"}


id: FYECO:0000058
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mating pheromone (M factor and P factor) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mating pheromone","termid":"FYECO:0000058"}


id: PBO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member A","termid":"PBO:0047200"}


id: GO:0071110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the addition of a biotinyl group.","definition_xrefs":["PMID:14613969","GOC:rph","PMID:19019041"],"gene_count":0,"genotype_count":0,"name":"obsolete histone biotinylation (obsolete GO:0071110)","termid":"GO:0071110"}


id: MOD:01304
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N4-hexosaminyl-L-lysine, as a synthetic peptide protectting group.","definition_xrefs":["Unimod:454#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-hexosaminylated lysine","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01304"}


id: PBO:0091930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR-proximal","termid":"PBO:0091930"}


id: PBO:0029285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleolus","termid":"PBO:0029285"}


id: GO:1904165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:TermGenie","GOC:BHF","PMID:22541436"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of triglyceride homeostasis (obsolete GO:1904165)","synonyms":[{"name":"activation of triacylglycerol homeostasis","type":"narrow"},{"name":"activation of triglyceride homeostasis","type":"narrow"},{"name":"positive regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up regulation of triglyceride homeostasis","type":"exact"},{"name":"up-regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up-regulation of triglyceride homeostasis","type":"exact"},{"name":"upregulation of triacylglycerol homeostasis","type":"exact"},{"name":"upregulation of triglyceride homeostasis","type":"exact"}],"termid":"GO:1904165"}


id: PBO:0077720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNPO3 pseudogene 1","termid":"PBO:0077720"}


id: GO:0140640
data:
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id: GO:0015697
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  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"}]},"cv_name":"biological_process","definition":"The directed movement into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"quaternary ammonium group transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015845"],"synonyms":[{"name":"quaternary amine transport","type":"exact"},{"name":"quaternary ammonium compound transport","type":"exact"}],"termid":"GO:0015697","terms_by_termid":{"GO:1990545":null}}


id: PBO:0074284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT3 antisense RNA 1","termid":"PBO:0074284"}


id: PBO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schneckenbecken dysplasia","termid":"PBO:0002636"}


id: PBO:0027969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_diethyl_maleate","termid":"PBO:0027969"}


id: PBO:0066204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 18","termid":"PBO:0066204"}


id: PBO:0002637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor eRF1","termid":"PBO:0002637"}


id: FYPO:0004396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which mitotic spindle elongation, i.e. the process of lengthening the distance between poles of the mitotic spindle, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000022","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic spindle elongation","synonyms":[{"name":"normal spindle elongation during mitotic cell cycle","type":"related"},{"name":"normal mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"normal spindle elongation during mitosis","type":"exact"}],"termid":"FYPO:0004396"}


id: FYPO:0002615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to pre-autophagosomal structure","synonyms":[{"name":"decreased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"decreased protein localization to PAS","type":"exact"},{"name":"decreased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"},{"name":"reduced protein localization to pre-autophagosomal structure","type":"exact"}],"termid":"FYPO:0002615"}


id: GO:0048922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in the developing posterior lateral line.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast deposition","termid":"GO:0048885"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast deposition","termid":"GO:0048922"}


id: PBO:0038686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin alpha 2, smooth muscle","termid":"PBO:0038686"}


id: PBO:0075901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2","termid":"PBO:0075901"}


id: PBO:0057806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3128","termid":"PBO:0057806"}


id: GO:0002831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a response to biotic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to biotic stimulus","termid":"GO:0002831"}


id: PBO:0005314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23 (predicted)","termid":"PBO:0005314"}


id: PBO:0060878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEMP2 divergent transcript","termid":"PBO:0060878"}


id: GO:0140747
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription of a non-protein coding gene from a DNA-template.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"ncRNA transcription","termid":"GO:0098781"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"regulation of ncRNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140747","terms_by_termid":{"GO:0060195":null}}


id: PBO:0063249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 14 pseudogene","termid":"PBO:0063249"}


id: FYPO:0001336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects a transport process in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"transport phenotype during vegetative growth","synonyms":[{"name":"fission yeast transport phenotype during vegetative growth","type":"exact"},{"name":"transport phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001336"}


id: PBO:0062317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 2","termid":"PBO:0062317"}


id: PBO:0058023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3973","termid":"PBO:0058023"}


id: PBO:0038655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 5, tartrate resistant","termid":"PBO:0038655"}


id: PBO:0062831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odd-skipped related transcription factor 1","termid":"PBO:0062831"}


id: PBO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transporter (predicted)","termid":"PBO:0001286"}


id: PBO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose Insensitive Transcription","termid":"PBO:0001589"}


id: PBO:0002690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PvGal biosynthesis protein Pvg5","termid":"PBO:0002690"}


id: PBO:0008516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family protein, involved in iron-sulfur cluster assembly (predicted)","termid":"PBO:0008516"}


id: PATO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning towards an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misaligned with","termid":"PATO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned towards","termid":"PATO:0002173"}


id: PBO:0041240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 105","termid":"PBO:0041240"}


id: GO:0036275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluorouracil stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluorouracil","synonyms":[{"name":"response to 5-fluoropyrimidine-2,4(1H,3H)-dione","type":"exact"},{"name":"response to fluorouracil","type":"exact"}],"termid":"GO:0036275"}


id: GO:0016062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a rhodopsin-mediated signaling pathway is adjusted to modulate the sensitivity and response of a visual system to light stimuli (that might vary over more than 6 magnitudes in intensity) without response saturation.","definition_xrefs":["PMID:1962207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"},{"relation_name":"part_of","term_name":"rhodopsin mediated signaling pathway","termid":"GO:0016056"},{"relation_name":"part_of","term_name":"light adaption","termid":"GO:0036367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adaptation of rhodopsin mediated signaling","synonyms":[{"name":"adaptation of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016062"}


id: PBO:0091272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4210 domain protein, human FAM214A ortholog, implicated in chromosome segregation","termid":"PBO:0091272"}


id: PBO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member A","termid":"PBO:0047159"}


id: PATO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern quality inhering in a bearer by virtue of the bearer's color pattern in which light and dark colors (for example white and black) are codistributed to create a visual impression.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high contrast color pattern","termid":"PATO:0002275"}


id: PBO:0003678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family Isp4","termid":"PBO:0003678"}


id: GO:1901330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"regulation of odontoblast differentiation","termid":"GO:1901329"},{"relation_name":"negatively_regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontoblast differentiation","synonyms":[{"name":"down regulation of odontoblast differentiation","type":"exact"},{"name":"down-regulation of odontoblast differentiation","type":"exact"},{"name":"downregulation of odontoblast differentiation","type":"exact"},{"name":"inhibition of odontoblast differentiation","type":"narrow"}],"termid":"GO:1901330"}


id: GO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["RHEA:13917","EC:1.1.1.207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(-)-menthol dehydrogenase activity","secondary_identifiers":["MetaCyc:--MENTHOL-DEHYDROGENASE-RXN","UM-BBD_reactionID:r1182","KEGG_REACTION:R02177"],"synonyms":[{"name":"(-)-menthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047504"}


id: PBO:0029479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sterol_ester_level","termid":"PBO:0029479"}


id: PBO:0027144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027144"}


id: GO:0099608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the temporal pattern of a sequence of action potentials in a neuron.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"spike train","termid":"GO:0098874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing pattern","synonyms":[{"name":"spike train sculpting","type":"exact"}],"termid":"GO:0099608"}


id: PBO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 12","termid":"PBO:0070904"}


id: GO:0030669
data:
  {"annotated_genes":["SJAG_00800","SJAG_00104","SJAG_02805","SJAG_01167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103689,106875,77197,73832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated endocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin-coated endocytic vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0030669","terms_by_termid":{"GO:0030122":null}}


id: PBO:0002817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24-like protein involved in ribosome biogenesis Rlp24 (predicted)","termid":"PBO:0002817"}


id: PBO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 7, pseudogene","termid":"PBO:0044794"}


id: PBO:0088366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit","termid":"PBO:0088366"}


id: PBO:0080288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 52 pseudogene","termid":"PBO:0080288"}


id: GO:0046231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete carbazole biosynthetic process (obsolete GO:0046231)","synonyms":[{"name":"carbazole anabolism","type":"exact"},{"name":"carbazole biosynthesis","type":"exact"},{"name":"carbazole biosynthetic process","type":"exact"},{"name":"carbazole formation","type":"exact"},{"name":"carbazole synthesis","type":"exact"}],"termid":"GO:0046231"}


id: PBO:0081877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 821","termid":"PBO:0081877"}


id: PBO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 18","termid":"PBO:0072141"}


id: PBO:0003439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase (predicted)","termid":"PBO:0003439"}


id: GO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein light chain (obsolete GO:0001690)","synonyms":[{"name":"cytoplasmic dynein light chain","type":"exact"}],"termid":"GO:0001690"}


id: FYPO:0008127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype where a ribosome is mislocalized to the nucleoplasm in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"ribosome mislocalized to nucleoplasm","termid":"FYPO:0008127"}


id: GO:0043771
data:
  {"annotated_genes":["SJAG_00533","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88610,110140],"is_not":false,"summary":null,"term":"GO:0043771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + cytidine = ADP + CMP.","definition_xrefs":["PMID:211379","RHEA:24674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cytidine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.213"],"synonyms":[{"name":"uridine-cytidine kinase activity","type":"narrow"}],"termid":"GO:0043771","terms_by_termid":{"GO:0043771":null}}


id: PBO:0051324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-4 (pseudogene)","termid":"PBO:0051324"}


id: GO:0060726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060726)","synonyms":[{"name":"regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060726"}


id: PBO:0010218
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge, SPNCRNA.502 was a subsequence of SPNCRNA.1228","termid":"PBO:0010218"}


id: PBO:0070789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 19","termid":"PBO:0070789"}


id: FYPO:0004543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of heterochromatin organization is abnormal in the vegetative growth phase of the life cycle. Heterochromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.","definition_xrefs":["PomBase:mah","GO:0070828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal heterochromatin organization during vegetative growth","synonyms":[{"name":"abnormal heterochromatin organisation during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004543"}


id: PBO:0078321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 3","termid":"PBO:0078321"}


id: PR:G2TRK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.15","synonyms":[{"name":"Spom972h-new12","type":"exact"}],"termid":"PR:G2TRK8"}


id: PBO:0072443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 7","termid":"PBO:0072443"}


id: FYPO:0005343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased during anaphase B.","definition_xrefs":["PomBase:mah","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"decreased rate of mitotic spindle elongation during anaphase B","synonyms":[{"name":"decreased rate of mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic spindle elongation during mitotic anaphase B","type":"exact"},{"name":"decreased rate of mitotic spindle extension during anaphase B","type":"exact"},{"name":"decreased rate of spindle elongation during anaphase B of mitosis","type":"exact"},{"name":"reduced rate of mitotic spindle elongation during anaphase B","type":"exact"}],"termid":"FYPO:0005343"}


id: GO:0035877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DED domain (death effector domain) of a protein, a homotypic protein interaction module composed of a bundle of six alpha-helices that is related in structure to the death domain (DD).","definition_xrefs":["GOC:ecd","InterPro:IPR001875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"death effector domain binding","synonyms":[{"name":"DED binding","type":"exact"}],"termid":"GO:0035877"}


id: FYPO:0001286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphoinositide measured in a cell is higher than normal. A phosphoinositide is any phosphatidylinositol that is phosphorylated at one or more of the hydroxy groups of inositol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"},{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphoinositide level","synonyms":[{"name":"increased PI accumulation","type":"related"},{"name":"increased cellular PI level","type":"related"},{"name":"increased cellular phosphoinositide level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphoinositide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001286"}


id: PBO:0073066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 4","termid":"PBO:0073066"}


id: PBO:0039840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 10","termid":"PBO:0039840"}


id: GO:0018679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dibenzothiophene-5,5-dioxide + O2 + 2 NADH + H+ = 2 NAD+ + H2O + 2'-hydroxybiphenyl-2-sulfinate.","definition_xrefs":["UM-BBD_reactionID:r0235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dibenzothiophene-5,5-dioxide monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-623","EC:1.14.14.-"],"termid":"GO:0018679"}


id: GO:1904076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24530842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of estrogen biosynthetic process","synonyms":[{"name":"regulation of estrogen anabolism","type":"exact"},{"name":"regulation of estrogen biosynthesis","type":"exact"},{"name":"regulation of estrogen formation","type":"exact"},{"name":"regulation of estrogen synthesis","type":"exact"},{"name":"regulation of oestrogen biosynthesis","type":"exact"},{"name":"regulation of oestrogen biosynthetic process","type":"exact"}],"termid":"GO:1904076"}


id: PBO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 18","termid":"PBO:0050240"}


id: PBO:0084858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; required for mitochondrial genome integrity, respiratory growth, and mitochondrial redox homeostasis, partially overlaps verified gene YPR099C","termid":"PBO:0084858"}


id: PBO:0068303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 7 pseudogene 1","termid":"PBO:0068303"}


id: PBO:0050745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 7","termid":"PBO:0050745"}


id: GO:0120029
data:
  {"annotated_genes":["SJAG_04258","SJAG_01669","SJAG_01541","SJAG_01129"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83500,83501,92324,109020],"is_not":false,"summary":null,"term":"GO:0120029"}]},"cv_name":"biological_process","definition":"The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:mah","PMID:9762918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01129":null,"SJAG_01541":null,"SJAG_01669":null,"SJAG_04258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"proton export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen ion export across plasma membrane","type":"exact"},{"name":"hydrogen ion export from cell","type":"broad"},{"name":"proton export from cell","type":"broad"}],"termid":"GO:0120029","terms_by_termid":{"GO:0120029":null}}


id: PBO:0073645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIGLEC family like 1","termid":"PBO:0073645"}


id: PBO:0044343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 27","termid":"PBO:0044343"}


id: GO:0060773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of floral organ primordia around a central axis in a flower primordium.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower phyllotactic patterning","termid":"GO:0060773"}


id: PATO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000166 absolute time (obsolete PATO:0000166)","termid":"PATO:0000166"}


id: GO:0006466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein disulfide-isomerase reaction (obsolete GO:0006466)","synonyms":[{"name":"protein disulfide-isomerase reaction","type":"exact"},{"name":"protein disulphide-isomerase reaction","type":"exact"}],"termid":"GO:0006466"}


id: PBO:0077038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 6","termid":"PBO:0077038"}


id: GO:0042928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferrichrome is transported into the cell by specific cell surface receptors. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["ISBN:0198506732","GOC:jl","PMID:23192658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-hydroxamate import into cell","termid":"GO:0015687"},{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0098771"],"is_obsolete":false,"name":"ferrichrome import into cell","synonyms":[{"name":"ferrichrome transport","type":"broad"}],"termid":"GO:0042928"}


id: FYPO:0001238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing staurosporine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on staurosporine","synonyms":[{"name":"normal cell population growth in presence of staurosporine","type":"exact"},{"name":"normal cell population growth on staurosporine","type":"exact"},{"name":"normal cellular response to staurosporine","type":"related"},{"name":"normal vegetative cell population growth on staurosporine","type":"exact"}],"termid":"FYPO:0001238"}


id: PBO:0034236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tracheates","termid":"PBO:0034236"}


id: PBO:0091101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-W ortholog","termid":"PBO:0091101"}


id: SO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified adenine is an adenine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_adenosine","synonyms":[{"name":"modified adenosine","type":"exact"}],"termid":"SO:0001273"}


id: PBO:0080999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 37","termid":"PBO:0080999"}


id: PR:O74886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC576.02 gene.","definition_xrefs":["UniProtKB:O74886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C576.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.02","synonyms":[{"name":"Spom972h-SPCC576.02","type":"exact"}],"termid":"PR:O74886"}


id: GO:0018544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-carboxy-4'-sulfoazobenzene + 4 H+ + 4 e- = 4-aminobenzoate + 4-aminobenzenesulfonate.","definition_xrefs":["UM-BBD_reactionID:r0543"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-carboxy-4'-sulfoazobenzene reductase activity (obsolete GO:0018544)","synonyms":[{"name":"4-carboxy-4'-sulphoazobenzene reductase activity","type":"exact"}],"termid":"GO:0018544"}


id: PBO:0031139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_myosin_filament_organization","termid":"PBO:0031139"}


id: PBO:0083009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD domain-containing phospholipase A1; mitochondrial matrix enzyme with sn-1-specific activity, hydrolyzing cardiolipin, PE, PC, PG and PA; implicated in remodeling of mitochondrial phospholipids; antagonistically regulated by Aft1p and Aft2p; in humans, mutations in DDHD1 and DDHD2 genes cause specific types of hereditary spastic paraplegia, while DDL1-defective yeast share similar phenotypes such as mitochondrial dysfunction and defects in lipid metabolism","termid":"PBO:0083009"}


id: GO:0047264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heteroglycan + GDP-mannose = alpha-D-mannosylheteroglycan + GDP.","definition_xrefs":["EC:2.4.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"heteroglycan alpha-mannosyltransferase activity","synonyms":[{"name":"GDP mannose alpha-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:heteroglycan 2-(or 3-)-alpha-D-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-heteroglycan alpha-mannosyltransferase activity","type":"related"},{"name":"heteropolysaccharide alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0047264"}


id: GO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gliogenesis","termid":"GO:0014013"}


id: GO:0047469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-carboxymethyl-4-methylbut-2-en-1,4-olide = 4-carboxymethyl-3-methylbut-2-en-1,4-olide.","definition_xrefs":["RHEA:19237","EC:5.4.99.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"4-carboxymethyl-4-methylbutenolide mutase activity","secondary_identifiers":["KEGG_REACTION:R04510","MetaCyc:5.4.99.14-RXN"],"synonyms":[{"name":"4-carboxymethyl-4-methylbut-2-en-1,4-olide methylmutase activity","type":"related"},{"name":"4-methyl-2-enelactone isomerase activity","type":"related"},{"name":"4-methyl-2-enelactone methyl-isomerase activity","type":"related"},{"name":"4-methyl-3-enelactone methyl isomerase activity","type":"related"},{"name":"4-methylmuconolactone methylisomerase activity","type":"related"}],"termid":"GO:0047469"}


id: GO:0015171
data:
  {"annotated_genes":["SJAG_02029","SJAG_04295","SJAG_04296","SJAG_04718","SJAG_02133","SJAG_00019","SJAG_00051","SJAG_02150","SJAG_01994","SJAG_04903","SJAG_02062","SJAG_05342","SJAG_02144","SJAG_02946","SJAG_02113","SJAG_06598","SJAG_02947","SJAG_01770","SJAG_00626","SJAG_03256","SJAG_03400","SJAG_04725","SJAG_02955","SJAG_04135","SJAG_03829","SJAG_04984","SJAG_04637","SJAG_04957","SJAG_00522","SJAG_00015","SJAG_04588","SJAG_03827","SJAG_01096","SJAG_03899","SJAG_00149","SJAG_04787","SJAG_02941","SJAG_00543","SJAG_01998"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73046,74781,74906,75454,75923,75944,76670,76686,77505,78530,78741,78894,85445,95538,98971,113359,113360,113361,113362,113363,113364,113365,113366,113546],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[86121,91306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015174"},{"annotations":[74878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[93784,95751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[91627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[95872,77905,92937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[98266,105352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[77902,93785,92151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[92938,77900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[98267,105353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[92939,95873,77898,98268,105354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[103282,76731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[96719,95864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[77899,86333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[77901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amino acids from one side of a membrane to the other. 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id: PBO:0074104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 1","termid":"PBO:0074104"}


id: GO:0102920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octanoyl-CoA + isopenicillin N + H2O = H+ + coenzyme A + penicillin K + L-2-aminoadipate.","definition_xrefs":["EC:2.3.1.164","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acyl coenzyme A: isopenicillin N acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8809"],"termid":"GO:0102920"}


id: PR:O94720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain-containing protein C1393.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.08","synonyms":[{"name":"Spom972h-SPCC1393.08","type":"exact"}],"termid":"PR:O94720"}


id: PBO:0056221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D1","termid":"PBO:0056221"}


id: PATO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000726 autonomic function value (obsolete PATO:0000726)","termid":"PATO:0000726"}


id: PBO:0066301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 3","termid":"PBO:0066301"}


id: PBO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 3","termid":"PBO:0044790"}


id: PBO:0068885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 126, pseudogene","termid":"PBO:0068885"}


id: GO:0090734
data:
  {"annotated_genes":["SJAG_00757","SJAG_04816","SJAG_02575","SJAG_03780","SJAG_02072","SJAG_01648","SJAG_00640","SJAG_03026","SJAG_01605","SJAG_01205","SJAG_03855","SJAG_02521","SJAG_01573","SJAG_01533","SJAG_01680","SJAG_04183","SJAG_01698","SJAG_05373","SJAG_05372","SJAG_00250","SJAG_03941","SJAG_01429","SJAG_05196","SJAG_03454","SJAG_03923","SJAG_05239","SJAG_05232","SJAG_02079","SJAG_01419","SJAG_00727","SJAG_01677","SJAG_03680","SJAG_01849","SJAG_01708","SJAG_04791","SJAG_02990","SJAG_02098","SJAG_04190","SJAG_03906","SJAG_03898","SJAG_02828","SJAG_01076","SJAG_01832","SJAG_02545","SJAG_01644","SJAG_05012","SJAG_05295","SJAG_02200","SJAG_02294","SJAG_01410","SJAG_04239","SJAG_02708","SJAG_02616","SJAG_01486","SJAG_02771","SJAG_00399","SJAG_02460","SJAG_04142","SJAG_03615","SJAG_03722"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87199,96555,106790,87099,84916,94509,98772,109518,84404,110710,112346,89296,96078,111440,98412,99603,85931,103171,74671,89576,98280,92997,111696,71741,74696,85041,99510,99862,92496,86009,78109,96106,85331,103130,96139,77747,106832,91763,113798,107003,94727,106502,103044,91607,92735,112847,76931,99670,106120,92701,104657,112441,111968,92269,94602,98358,92101,107779,88313,71315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035861"}]},"cv_name":"cellular_component","definition":"A region of a chromosome at which DNA damage has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00250":null,"SJAG_00399":null,"SJAG_00640":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01429":null,"SJAG_01486":null,"SJAG_01533":null,"SJAG_01573":null,"SJAG_01605":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01832":null,"SJAG_01849":null,"SJAG_02072":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02545":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02708":null,"SJAG_02771":null,"SJAG_02828":null,"SJAG_02990":null,"SJAG_03026":null,"SJAG_03454":null,"SJAG_03615":null,"SJAG_03680":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03923":null,"SJAG_03941":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04239":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_05012":null,"SJAG_05196":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05372":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"site of DNA damage","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:DNA_repair"],"termid":"GO:0090734","terms_by_termid":{"GO:0035861":null}}


id: PBO:0046640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 21","termid":"PBO:0046640"}


id: PBO:0082147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the presence of oxygen; ARE2 has a paralog, ARE1, that arose from the whole genome duplication","termid":"PBO:0082147"}


id: GO:0042764
data:
  {"annotated_genes":["SJAG_02076","SJAG_04483","SJAG_00821","SJAG_03746","SJAG_03079","SJAG_04781","SJAG_03721","SJAG_04470","SJAG_03587","SJAG_04080","SJAG_01084","SJAG_01469","SJAG_02736","SJAG_03536","SJAG_04184","SJAG_03688","SJAG_03013","SJAG_03638","SJAG_01867","SJAG_02169","SJAG_02368","SJAG_01697","SJAG_01855","SJAG_04922","SJAG_04948","SJAG_00663","SJAG_01769","SJAG_03250","SJAG_00430","SJAG_04001","SJAG_00974","SJAG_00971","SJAG_01825","SJAG_00405","SJAG_00826","SJAG_03145","SJAG_03483","SJAG_04275","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87428,109693,110531],"is_not":false,"summary":null,"term":"GO:0042764"},{"annotations":[87522,108290],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905754"},{"annotations":[98748,112090,104409,87166,90969,96985,102764,83998,86431,88529,89501,100383,93113,86963,111433,92215,97201,109319,112645,114086,89202,99622,98700,104643,96346,90088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005628"},{"annotations":[98372,94375,113626],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[98373,100695,113627],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"},{"annotations":[111159,90128,101419,95623],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"An immature spore undergoing development. The spore usually consists of nucleic acid, prospore membrane(s) that encase the nucleic acid, and ultimately a cell wall that covers the membrane(s). This type of spore is observed in ascospore-forming fungi.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular immature spore","termid":"GO:0042763"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01084":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01769":null,"SJAG_01825":null,"SJAG_01855":null,"SJAG_01867":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03638":null,"SJAG_03688":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascospore-type prospore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042764","terms_by_termid":{"GO:0005628":null,"GO:0032169":null,"GO:0042764":null,"GO:0070056":null,"GO:0070057":null,"GO:1905754":null}}


id: PBO:0064160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIE","termid":"PBO:0064160"}


id: PBO:0069568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 840, pseudogene","termid":"PBO:0069568"}


id: PBO:0028148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_box_C/D_snoRNA_3'-end_processing","termid":"PBO:0028148"}


id: PBO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.34","termid":"PBO:0001859"}


id: PBO:0062537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 2 pseudogene","termid":"PBO:0062537"}


id: GO:0140715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex that catalyzes the ligation of serine to tRNA(Ser), forming L-seryl-tRNA(Ser).","definition_xrefs":["PMID:30943413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serine-tRNA ligase complex","termid":"GO:0140715"}


id: PBO:0083646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT1 has a paralog, EFT2, that arose from the whole genome duplication","termid":"PBO:0083646"}


id: _global:recombined_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombined_to","termid":"_global:recombined_to"}


id: GO:0110149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of biomineralization (obsolete GO:0110149)","synonyms":[{"name":"regulation of biomineral formation","type":"narrow"},{"name":"regulation of biomineralisation","type":"exact"},{"name":"regulation of mineralisation","type":"exact"},{"name":"regulation of mineralization","type":"exact"}],"termid":"GO:0110149"}


id: GO:1903939
data:
  {"annotated_genes":["SJAG_06588","SJAG_00143","SJAG_04206","SJAG_05030"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[102387,86875,93314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TORC2 signaling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24247430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"regulates","term_name":"TORC2 signaling","termid":"GO:0038203"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_04206":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TORC2 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of TORC2 signal transduction","type":"exact"}],"termid":"GO:1903939","terms_by_termid":{"GO:1903940":null,"GO:1904515":null}}


id: PBO:0091051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion import channel Cch1","termid":"PBO:0091051"}


id: GO:0071829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a plasma lipoprotein particle into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex disassembly","termid":"GO:0032987"},{"relation_name":"is_a","term_name":"plasma lipoprotein particle organization","termid":"GO:0071827"},{"relation_name":"part_of","term_name":"regulation of plasma lipoprotein particle levels","termid":"GO:0097006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle disassembly","termid":"GO:0071829"}


id: PBO:0070112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 26 pseudogene","termid":"PBO:0070112"}


id: GO:1903489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lactation.","definition_xrefs":["GOC:TermGenie","PMID:19563620","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lactation","termid":"GO:1903487"},{"relation_name":"positively_regulates","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactation","synonyms":[{"name":"activation of lactation","type":"narrow"},{"name":"up regulation of lactation","type":"exact"},{"name":"up-regulation of lactation","type":"exact"},{"name":"upregulation of lactation","type":"exact"}],"termid":"GO:1903489"}


id: PBO:0048653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 3","termid":"PBO:0048653"}


id: GO:0052850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrocurcumin + NADPH+ + H+ = tetrahydrocurcumin + NADP+.","definition_xrefs":["MetaCyc:RXN0-6677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH-dependent dihydrocurcumin reductase activity","synonyms":[{"name":"dihydrocurcumin reductase (NADPH) activity","type":"exact"}],"termid":"GO:0052850"}


id: PBO:0079292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 10","termid":"PBO:0079292"}


id: GO:1903673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cleavage furrow formation that is involved in mitotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleavage furrow formation","termid":"GO:0036089"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cleavage furrow formation","synonyms":[{"name":"cleavage furrow positioning involved in mitotic cell cycle","type":"narrow"}],"termid":"GO:1903673"}


id: PBO:0070433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa GTPase regulator","termid":"PBO:0070433"}


id: PBO:0059649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 15","termid":"PBO:0059649"}


id: GO:0006047
data:
  {"annotated_genes":["SJAG_00519","SJAG_01443","SJAG_04728","SJAG_00978","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71045,72159,75891,70843,98250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_03723":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"UDP-N-acetylglucosamine metabolism","type":"exact"}],"termid":"GO:0006047","terms_by_termid":{"GO:0006048":null}}


id: GO:0099112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a protein driven by polymerization of a microtubule to which it is attached.","definition_xrefs":["PMID:11018050","GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"microtubule-based protein transport","termid":"GO:0099118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization based protein transport","termid":"GO:0099112"}


id: PBO:0081931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1A","termid":"PBO:0081931"}


id: PBO:0064528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit GL","termid":"PBO:0064528"}


id: FYPO:0001014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal membrane organization during nitrogen starvation","synonyms":[{"name":"abnormal cellular membrane organization during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organisation during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organization during nitrogen depletion","type":"exact"},{"name":"abnormal membrane organization during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0001014"}


id: GO:0051283
data:
  {"annotated_genes":["SJAG_00321","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"negatively_regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"down regulation of sequestering of calcium ion","type":"exact"},{"name":"down-regulation of sequestering of calcium ion","type":"exact"},{"name":"downregulation of sequestering of calcium ion","type":"exact"},{"name":"inhibition of sequestering of calcium ion","type":"narrow"},{"name":"negative regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"negative regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051283","terms_by_termid":{"GO:0051209":null,"GO:0061454":null}}


id: GO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxykynurenate + O2 = 5-(3-carboxylato-3-oxoprop-1-en-1-yl)-4,6-dihydroxypyridine-2-carboxylate + H+.","definition_xrefs":["EC:1.13.11.10","RHEA:23400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"7,8-dihydroxykynurenate 8,8a-dioxygenase activity","secondary_identifiers":["MetaCyc:1.13.11.10-RXN","KEGG_REACTION:R03253"],"synonyms":[{"name":"7,8-dihydroxykynurenate 8,8alpha-dioxygenase activity","type":"related"},{"name":"7,8-dihydroxykynurenate oxygenase activity","type":"related"},{"name":"7,8-dihydroxykynurenate:oxygen 8,8a-oxidoreductase (decyclizing)","type":"related"},{"name":"7,8-dihydroxykynurenate:oxygen 8,8alpha-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047069"}


id: PBO:0082618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing Cef1p; putatively involved in pre-mRNA splicing; has similarity to E. coli DnaJ and other DnaJ-like proteins and to S. pombe Cwf23p","termid":"PBO:0082618"}


id: PBO:0109086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 like, pseudogene","termid":"PBO:0109086"}


id: FYPO:0003830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the cytokinesis checkpoint of a mitotic cell cycle is abnormal. The cytokinesis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0044878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cytokinesis checkpoint","synonyms":[{"name":"abnormal cytokinesis after mitosis checkpoint","type":"exact"},{"name":"abnormal cytokinesis checkpoint activation","type":"related"},{"name":"abnormal mitotic cell cycle cytokinesis checkpoint","type":"exact"}],"termid":"FYPO:0003830"}


id: GO:0098573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial membrane (obsolete GO:0098573)","synonyms":[{"name":"intrinsic to mitochondrial membrane","type":"narrow"}],"termid":"GO:0098573"}


id: GO:0010838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte proliferation","termid":"GO:0010837"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte proliferation","termid":"GO:0010838"}


id: GO:0043100
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates pyrimidine nucleobases, 1,3-diazine organic nitrogenous bases, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleobase salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base salvage","type":"exact"}],"termid":"GO:0043100","terms_by_termid":{"GO:0006223":null}}


