# terms

id: GO:1902631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["PMID:23223304","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"negatively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane hyperpolarization","synonyms":[{"name":"down regulation of membrane hyperpolarization","type":"exact"},{"name":"down-regulation of membrane hyperpolarization","type":"exact"},{"name":"downregulation of membrane hyperpolarization","type":"exact"},{"name":"inhibition of membrane hyperpolarization","type":"narrow"}],"termid":"GO:1902631"}


id: PBO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase Trm13 (predicted)","termid":"PBO:0001722"}


id: GO:0019921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carboxy-terminal peptidyl-1-thioglycine, which has a carboxy-terminal thiocarboxy-C(=O)-SH bond.","definition_xrefs":["RESID:AA0265","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine","termid":"GO:0018173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"peptidyl-1-thioglycine biosynthetic process, carboxy-terminal","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, carboxy-terminal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, carboxy-terminal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, carboxy-terminal","type":"exact"}],"termid":"GO:0019921"}


id: PR:P40976
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminoadipate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.04c","synonyms":[{"name":"L-aminoadipate-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys1","type":"exact"},{"name":"alpha-AR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-aminoadipate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40976"}


id: GO:0043823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spheroidene + O2 = spheroidenone + H2O.","definition_xrefs":["PMID:16158287","PMID:16086104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"spheroidene monooxygenase activity","secondary_identifiers":["EC:1.14.15.9","RHEA:33027","MetaCyc:RXN-10670"],"termid":"GO:0043823"}


id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: PR:Q9C1X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pwp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1X1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic tryptophan protein 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.04c","synonyms":[{"name":"Spom972h-pwp2","type":"exact"}],"termid":"PR:Q9C1X1"}


id: GO:0006772
data:
  {"annotated_genes":["SJAG_00381","SJAG_02406","SJAG_01742","SJAG_04067","SJAG_03362","SJAG_04866","SJAG_00827","SJAG_01970","SJAG_03538","SJAG_02420","SJAG_04282","SJAG_02047","SJAG_02421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58975,66267],"is_not":false,"summary":null,"term":"GO:0006772"},{"annotations":[108930,84795],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[70519,73629,73673,102759,76191,77326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[105761,105762,95046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"thiamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Thiamine"],"synonyms":[{"name":"thiamin metabolic process","type":"exact"},{"name":"thiamin metabolism","type":"exact"},{"name":"thiamine metabolism","type":"exact"},{"name":"vitamin B1 metabolic process","type":"exact"},{"name":"vitamin B1 metabolism","type":"exact"}],"termid":"GO:0006772","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: GO:0032237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that initiates the activity of an inactive store-operated calcium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of store-operated calcium channel activity","termid":"GO:1901341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"activation of store-operated calcium channel activity","termid":"GO:0032237"}


id: PBO:0051265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (IV)-44-1 (pseudogene)","termid":"PBO:0051265"}


id: PBO:0068546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 152, pseudogene","termid":"PBO:0068546"}


id: PBO:0051358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR22-3 (pseudogene)","termid":"PBO:0051358"}


id: PBO:0083548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YDL063C; YDL062W is not essential","termid":"PBO:0083548"}


id: PBO:0029296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_S-adenosyl-3-thiopropylamine_level_during_G0","termid":"PBO:0029296"}


id: PBO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 8","termid":"PBO:0047656"}


id: GO:0006237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxycytidine, 2-deoxyribosylcytosine, from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside salvage","termid":"GO:0043099"},{"relation_name":"is_a","term_name":"deoxycytidine biosynthetic process","termid":"GO:0046093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxycytidine salvage","termid":"GO:0006237"}


id: PBO:0039223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKR7A2P pseudogene 1","termid":"PBO:0039223"}


id: PBO:0082117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylglutamate kinase and N-acetyl-gamma-glutamyl-phosphate reductase; N-acetyl-L-glutamate kinase (NAGK) catalyzes the 2nd and N-acetyl-gamma-glutamyl-phosphate reductase (NAGSA), the 3rd step in arginine biosynthesis; synthesized as a precursor which is processed in the mitochondrion to yield mature NAGK and NAGSA; enzymes form a metabolon complex with Arg2p; NAGK C-terminal domain stabilizes the enzymes, slows catalysis and is involved in feed-back inhibition by arginine","termid":"PBO:0082117"}


id: PBO:0088008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I HSP40 co-chaperone; involved in regulation of HSP90 and HSP70 functions; acts as an adaptor that helps Rsp5p recognize cytosolic misfolded proteins for ubiquitination after heat shock; critical for determining cell size at Start as a function of growth rate; involved in protein translocation across membranes; member of the DnaJ family; chimeric protein in which human p58IPK J domain replaces yeast Ydj1p J domain can complement yeast ydj1 mutant","termid":"PBO:0088008"}


id: PBO:0062480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily L member 1 pseudogene","termid":"PBO:0062480"}


id: PR:O74339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.06c","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tam41","type":"exact"},{"name":"TAM41 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitochondrial translocator assembly and maintenance protein 41 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74339"}


id: PBO:0088136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane zinc transporter; transports zinc from cytosol to vacuole for storage; also has role in resistance to zinc shock resulting from sudden influx of zinc into cytoplasm; human ortholog SLC30A10 functions as a Mn transporter and mutations in SLC30A10 cause neurotoxic accumulation of Mn in liver and brain; ZRC1 has a paralog, COT1, that arose from the whole genome duplication","termid":"PBO:0088136"}


id: PBO:0067916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 218","termid":"PBO:0067916"}


id: GO:0086093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled acetylcholine receptor signaling pathway, which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in heart process","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in heart process","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signalling pathway involved in heart process","type":"exact"},{"name":"M2 receptor signaling pathway involved in heart process","type":"narrow"},{"name":"muscarinic receptor signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086093"}


id: PBO:0077599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11B","termid":"PBO:0077599"}


id: PBO:0070772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 2","termid":"PBO:0070772"}


id: PBO:0078333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-5","termid":"PBO:0078333"}


id: GO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism positively regulates the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of acid-sensing ion channel in another organism","termid":"GO:0044737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acid-sensing ion channel in another organism","synonyms":[{"name":"positive regulation of ASIC channel in other organism","type":"exact"},{"name":"positive regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044739"}


id: GO:0035716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 12.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 12 binding","synonyms":[{"name":"CCL12 binding","type":"exact"}],"termid":"GO:0035716"}


id: PBO:0035805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_during_vegetative_growth","termid":"PBO:0035805"}


id: PBO:0071448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 54","termid":"PBO:0071448"}


id: PBO:0081936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1F","termid":"PBO:0081936"}


id: GO:0048502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + thiamine(out) = ADP + H+ + phosphate + thiamine(in).","definition_xrefs":["PMID:12175925","RHEA:29811","PMID:9535878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine transmembrane transporter activity","termid":"GO:0015234"},{"relation_name":"is_a","term_name":"ABC-type azole transporter activity","termid":"GO:0140394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type thiamine transporter activity","secondary_identifiers":["GO:0015619","TC:3.A.1.19.1","EC:7.6.2.15"],"synonyms":[{"name":"ATP-dependent thiamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled thiamine transmembrane transporter activity","type":"related"},{"name":"TPP transporting ATPase activity","type":"related"},{"name":"thiamin pyrophosphate ABC transporter","type":"exact"},{"name":"thiamin pyrophosphate porter activity","type":"broad"},{"name":"thiamin pyrophosphate transporting ATPase activity","type":"related"},{"name":"thiamin-transporting ATPase activity","type":"related"},{"name":"thiamine ABC transporter","type":"exact"},{"name":"thiamine pyrophosphate-transporting ATPase activity","type":"related"},{"name":"thiamine-transporting ATPase activity","type":"related"}],"termid":"GO:0048502"}


id: PBO:0069163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 415, pseudogene","termid":"PBO:0069163"}


id: PBO:0000507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase activating kinase Csk1","termid":"PBO:0000507"}


id: PBO:0057468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 586","termid":"PBO:0057468"}


id: PBO:0031468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031468"}


id: GO:0042405
data:
  {"annotated_genes":["SJAG_04768","SJAG_01805","SJAG_03161","SJAG_04187","SJAG_00082","SJAG_00178","SJAG_00335","SJAG_04601","SJAG_04055","SJAG_03048","SJAG_00471","SJAG_03300","SJAG_01837","SJAG_03543","SJAG_01186","SJAG_04645","SJAG_01374","SJAG_01408","SJAG_00302","SJAG_04855","SJAG_04140","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87886,107860,110679,94585,110112,86645,97746,85719,97829,107861,111841,107862,101152,106479,107324,110678,100791,89433,99654,83297,84758,99743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"An intranuclear focus at which aggregated proteins have been sequestered.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042405","terms_by_termid":{"GO:0140602":null}}


id: FYPO:0006867
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[114504,114503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[114486,114474,114482,114475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell cortex","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell cortex","type":"exact"}],"termid":"FYPO:0006867","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: PBO:0068772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 9","termid":"PBO:0068772"}


id: GO:1905930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation involved in phenotypic switching.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:BHF","GOC:TermGenie","PMID:25089138","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905063"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905930"}


id: PBO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase Cts1 (predicted)","termid":"PBO:0000841"}


id: GO:0030157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine. Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pancreatic juice secretion","termid":"GO:0030157"}


id: GO:0060740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of epithelia of the prostate gland are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"prostate gland morphogenesis","termid":"GO:0060512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"}


id: PBO:0052195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMB3 pseudogene 1","termid":"PBO:0052195"}


id: PATO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity of a process","synonyms":[{"name":"high sensitivity of occurrent","type":"exact"},{"name":"increased sensitivity of occurrent","type":"exact"}],"termid":"PATO:0001551"}


id: PBO:0002868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp51 (predicted)","termid":"PBO:0002868"}


id: PBO:0077980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 3-1","termid":"PBO:0077980"}


id: PR:Q9USH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13186:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.03c","secondary_identifiers":["UniProtKB:Q9USH1"],"synonyms":[{"name":"SPCP31B10.03c","type":"related"},{"name":"Spom972h-MED31","type":"exact"},{"name":"cell separation protein sep10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sep10","type":"related"},{"name":"soh1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH1"}


id: GO:0033860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme NAD(P)H oxidase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NAD(P)H oxidase activity","termid":"GO:0033860"}


id: GO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p.","definition_xrefs":["PMID:16873066","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hrd1p ubiquitin ligase complex","termid":"GO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0032991","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase ERAD-M complex","termid":"GO:0000838"}


id: GO:0047014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NADP+ = D-glyceraldehyde 3-phosphate + H+ + NADPH.","definition_xrefs":["RHEA:19773","EC:1.1.1.177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate 1-dehydrogenase [NADP+] activity","secondary_identifiers":["KEGG_REACTION:R00845","MetaCyc:1.1.1.177-RXN"],"synonyms":[{"name":"L-glycerol 3-phosphate:NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent glycerin-3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerin-3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerol phosphate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"sn-glycerol-3-phosphate:NADP+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047014"}


id: PBO:0042508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 2","termid":"PBO:0042508"}


id: PR:O36024
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.12","synonyms":[{"name":"Spom972h-fta1","type":"exact"},{"name":"sim4 complex subunit fta1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36024"}


id: PBO:0080797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 1","termid":"PBO:0080797"}


id: GO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a lipopolysaccharide (LPS) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Lipopolysaccharides are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:15379975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"LPS-mediated signaling pathway","type":"exact"},{"name":"lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031663"}


id: GO:0015857
data:
  {"annotated_genes":["SJAG_04714","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83883],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[91139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The directed movement of uracil, 2,4-dioxopyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"uracil transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015857","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: GO:0120307
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extended membranous thread which firmly connects the plasma membrane to the cell wall during plasmolysis such that the plasma membrane does not separate from the cell wall completely.","definition_xrefs":["PMID:32397402","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Hechtian strand","secondary_identifiers":["Wikipedia:Hechtian_strand"],"termid":"GO:0120307"}


id: MOD:01391
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-valine residue, and C-5 methoxymethylates to form L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0468","PubMed:7844053","PubMed:10625477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-methylpropyl]-5-(methoxymethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-methylpropyl]-5-(methoxymethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-(methoxymethyl)thiazole-4-carboxylic acid (Val-Cys)","type":"exact"},{"name":"L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01391"}


id: GO:0120214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of histidine biosynthetic process","synonyms":[{"name":"down regulation of histidine anabolism","type":"exact"},{"name":"down regulation of histidine biosynthesis","type":"exact"},{"name":"down regulation of histidine biosynthetic process","type":"exact"},{"name":"down regulation of histidine formation","type":"exact"},{"name":"down regulation of histidine synthesis","type":"exact"},{"name":"down-regulation of histidine anabolism","type":"exact"},{"name":"down-regulation of histidine biosynthesis","type":"exact"},{"name":"down-regulation of histidine biosynthetic process","type":"exact"},{"name":"down-regulation of histidine formation","type":"exact"},{"name":"down-regulation of histidine synthesis","type":"exact"},{"name":"downregulation of histidine anabolism","type":"exact"},{"name":"downregulation of histidine biosynthesis","type":"exact"},{"name":"downregulation of histidine biosynthetic process","type":"exact"},{"name":"downregulation of histidine formation","type":"exact"},{"name":"downregulation of histidine synthesis","type":"exact"},{"name":"inhibition of histidine anabolism","type":"narrow"},{"name":"inhibition of histidine biosynthesis","type":"narrow"},{"name":"inhibition of histidine biosynthetic process","type":"narrow"},{"name":"inhibition of histidine formation","type":"narrow"},{"name":"inhibition of histidine synthesis","type":"narrow"},{"name":"negative regulation of histidine anabolism","type":"exact"},{"name":"negative regulation of histidine biosynthesis","type":"exact"},{"name":"negative regulation of histidine formation","type":"exact"},{"name":"negative regulation of histidine synthesis","type":"exact"}],"termid":"GO:0120214"}


id: PR:O60016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr4 gene.","definition_xrefs":["UniProtKB:O60016","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-9 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.08c","synonyms":[{"name":"H3-K9-HMTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-clr4","type":"exact"},{"name":"cryptic loci regulator 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"histone H3-K9 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysine N-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60016"}


id: FYPO:0006724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which movement of a protein away from Cdr2 medial cortical node complexes during a cellular response to osmotic stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:28924043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress","synonyms":[{"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0006724"}


id: GO:0047275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = D-galactosyl-N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["MetaCyc:2.4.1.86-RXN","EC:2.4.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity","secondary_identifiers":["RHEA:16045"],"synonyms":[{"name":"GalT-4","type":"related"},{"name":"UDP-galactose:N-acetyl-D-glucosaminyl-1,3-D-galactosyl-1,4-D-glucosylceramide beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-D-glucosaminyl-1,3-D-galactosyl-1,4-D-glucosylceramide beta-D-galactosyltransferase activity","type":"related"},{"name":"paragloboside synthase activity","type":"related"},{"name":"uridine diphosphogalactose-acetyl-glucosaminylgalactosylglucosylceramide galactosyltransferase activity","type":"related"}],"termid":"GO:0047275"}


id: PBO:0091865
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ring-type zinc finger protein","termid":"PBO:0091865"}


id: GO:0120023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to somatostatin, a polypeptide hormone involved in regulating pancreatic alpha and pancreatic beta cells and controlling growth hormone secretion as well as many other functions. Somatostatin is produced by several cell types including pancreatic delta cells. There are several different mature forms of somatostatin.","definition_xrefs":["GOC:cvs","PMID:20472043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"somatostatin binding","termid":"GO:0120023"}


id: GO:1905137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral DNA genome packaging via site-specific sequence recognition.","definition_xrefs":["GO_REF:0000058","PMID:24711378","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral DNA genome packaging via site-specific sequence recognition","termid":"GO:1905137"}


id: SO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2B modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2B_acetylation_site","synonyms":[{"name":"H2Bac","type":"exact"},{"name":"histone 2B acetylation site","type":"exact"}],"termid":"SO:0002143"}


id: PBO:0059561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1E","termid":"PBO:0059561"}


id: GO:1904523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA amplification.","definition_xrefs":["GOC:TermGenie","PMID:26195783","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA amplification","termid":"GO:1904523"}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: PBO:0024859
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex translocates along DNA/RNA duplex","termid":"PBO:0024859"}


id: PBO:0051440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-25","termid":"PBO:0051440"}


id: PBO:0082413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional carbamoylphosphate synthetase/aspartate transcarbamylase; catalyzes the first two enzymatic steps in the de novo biosynthesis of pyrimidines; both activities are subject to feedback inhibition by UTP","termid":"PBO:0082413"}


id: PR:Q10192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.07","secondary_identifiers":["UniProtKB:Q10192"],"synonyms":[{"name":"Spom972h-RPL18","type":"exact"}],"termid":"PR:Q10192"}


id: GO:1990299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a Bub1-Bub3 complex; as a result, the complex is transported to, or maintained in, a specific location at the kinetochore.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"Bub1-Bub3 complex localization to kinetochore","termid":"GO:1990299"}


id: PBO:0017414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-preceded_by","termid":"PBO:0017414"}


id: PBO:0087821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (48 kDa); involved in RNA polymerase II transcription initiation; potential Cdc28p substrate","termid":"PBO:0087821"}


id: PBO:0075940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and cysteine rich domain 3","termid":"PBO:0075940"}


id: PBO:0077195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM2 domain containing 3","termid":"PBO:0077195"}


id: GO:0005315
data:
  {"annotated_genes":["SJAG_04241","SJAG_01059","SJAG_01033","SJAG_00612","SJAG_00547"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71092,77549,107983,111690],"is_not":false,"summary":null,"term":"GO:0005315"},{"annotations":[98318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_00612":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"inorganic phosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0005317"],"termid":"GO:0005315","terms_by_termid":{"GO:0005315":null,"GO:0140987":null}}


id: GO:0008659
data:
  {"annotated_genes":["SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96242],"is_not":false,"summary":null,"term":"GO:0008659"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxytetradecanoyl-[acyl-carrier protein] = tetradecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["GOC:ai","PMID:12368867","RHEA:41892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","termid":"GO:0019171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(3R)-3-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"(3R)-hydroxymyristoyl-ACP dehydratase activity","type":"exact"},{"name":"(3R)-hydroxymyristoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"}],"termid":"GO:0008659","terms_by_termid":{"GO:0008659":null}}


id: GO:0008732
data:
  {"annotated_genes":["SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72012],"is_not":false,"summary":null,"term":"GO:0008732"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-allo-threonine = glycine + acetaldehyde.","definition_xrefs":["PMID:9228760","RHEA:26209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine aldolase activity","termid":"GO:0004793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"L-allo-threonine aldolase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:4.1.2.49","MetaCyc:LTAA-RXN"],"synonyms":[{"name":"L-allo-threonine acetaldehyde-lyase activity","type":"exact"},{"name":"LtaA","type":"related"}],"termid":"GO:0008732","terms_by_termid":{"GO:0008732":null}}


id: FYPO:0001313
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[114436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, or morphology of a cell part is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal subcellular component during vegetative growth","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta"],"synonyms":[{"name":"normal subcellular component during mitotic cell cycle","type":"related"},{"name":"normal subcellular structure during vegetative growth","type":"related"}],"termid":"FYPO:0001313","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: FYPO:0002662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose level during heat shock","synonyms":[{"name":"decreased cellular trehalose level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased trehalose accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose level during heat shock","type":"exact"}],"termid":"FYPO:0002662"}


id: PBO:0070204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 129 pseudogene","termid":"PBO:0070204"}


id: PBO:0048921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member R","termid":"PBO:0048921"}


id: GO:0003088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine","termid":"GO:0003059"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by circulating epinephrine-norepinephrine","termid":"GO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating epinephrine","synonyms":[{"name":"increased force of heart contraction by circulating adrenaline","type":"related"},{"name":"increased force of heart contraction by epinephrine in the bloodstream","type":"exact"},{"name":"positive regulation of heart contraction by circulating adrenaline","type":"related"},{"name":"positive regulation of heart contraction by circulating epinephrine","type":"related"}],"termid":"GO:0003088"}


id: GO:0006497
data:
  {"annotated_genes":["SJAG_02913","SJAG_03878","SJAG_05219","SJAG_01227","SJAG_00068","SJAG_00831","SJAG_06425","SJAG_06383","SJAG_01860","SJAG_05327","SJAG_02523","SJAG_06309","SJAG_02488","SJAG_02903","SJAG_04881","SJAG_04119","SJAG_01416","SJAG_00846","SJAG_00295","SJAG_03115","SJAG_03672","SJAG_03801","SJAG_00059","SJAG_05278","SJAG_03292","SJAG_04165","SJAG_02776","SJAG_04975","SJAG_03506","SJAG_04337","SJAG_02804","SJAG_04924","SJAG_03066"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74101,109192,74111,71106,87068],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[75589,74388,74946,99221,102114,106884,76372,75630,77218,71337,111327,73061,76821,112381,74927,76516,71853,70153,76669,84687,85292,72932,88634,110010,70801,76517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[85816,105972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061739"}]},"cv_name":"biological_process","definition":"The covalent attachment of lipid groups to an amino acid in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"lipoprotein biosynthetic process","termid":"GO:0042158"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06309":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein lipidation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["RESID:AA0163","RESID:AA0308","RESID:AA0104","RESID:AA0080","RESID:AA0079","RESID:AA0158","RESID:AA0223","RESID:AA0162","RESID:AA0290","RESID:AA0307","RESID:AA0107","RESID:AA0159","RESID:AA0059","RESID:AA0166","RESID:AA0309","RESID:AA0160","GO:0042050","RESID:AA0077","RESID:AA0102","RESID:AA0078","RESID:AA0103","RESID:AA0316","RESID:AA0161","RESID:AA0060","RESID:AA0106"],"synonyms":[{"name":"lipid:protein modification","type":"exact"},{"name":"protein amino acid lipidation","type":"exact"}],"termid":"GO:0006497","terms_by_termid":{"GO:0006506":null,"GO:0016255":null,"GO:0061739":null}}


id: PBO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing","termid":"PBO:0030536"}


id: FYPO:0007883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cleavage-dependent termination of transcription by RNA polymerase II is abnormal. In cleavage-dependent termination, co-transcriptional secondary structure-dependent endonucleolytic cleavage triggers RNA polymerase II transcription termination; transcripts are not polyadenylated, and are subsequently rapidly degraded in the nucleus. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["PomBase:mah","PMID:34352089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased termination of RNA polymerase II transcription","termid":"FYPO:0006613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"decreased cleavage-dependent termination of RNA polymerase II transcription","synonyms":[{"name":"decreased Pac1-dependent termination of RNA polymerase II transcription","type":"related"},{"name":"decreased cleavage-dependent RNA polymerase II transcription termination","type":"exact"},{"name":"decreased cleavage-dependent premature transcription termination","type":"narrow"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007883"}


id: PBO:0053888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1168","termid":"PBO:0053888"}


id: GO:0051911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + 2-(2,3-dihydropentaprenyloxy)phenazine = 2-dihydropentaprenyloxyphenazine.","definition_xrefs":["EC:1.12.98.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"Methanosarcina-phenazine hydrogenase activity","secondary_identifiers":["MetaCyc:RXN-7733","RHEA:24436"],"synonyms":[{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity","type":"related"},{"name":"hydrogen:2-(2,3-dihydropentaprenyloxy)phenazine oxidoreductase activity","type":"related"},{"name":"methanophenazine hydrogenase activity","type":"exact"},{"name":"methylviologen-reducing hydrogenase activity","type":"exact"}],"termid":"GO:0051911"}


id: PBO:0044549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 1","termid":"PBO:0044549"}


id: GO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-methionine from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid secondary active transmembrane transporter activity","termid":"GO:0005294"},{"relation_name":"is_a","term_name":"L-methionine transmembrane transporter activity","termid":"GO:0015191"},{"relation_name":"is_a","term_name":"sulfur-containing amino acid secondary active transmembrane transporter activity","termid":"GO:1901680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-methionine secondary active transmembrane transporter activity","synonyms":[{"name":"L-methionine porter activity","type":"related"}],"termid":"GO:0000102"}


id: GO:2001060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a D-glycero-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-glycero-D-manno-heptose 7-phosphate metabolic process","synonyms":[{"name":"D-glycero-D-manno-heptose 7-phosphate metabolism","type":"exact"}],"termid":"GO:2001060"}


id: PBO:0084566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane peroxin of the peroxisomal importomer complex; complex facilitates the import of peroxisomal matrix proteins; required for peroxisome biogenesis","termid":"PBO:0084566"}


id: PBO:0026733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_kinetochore","termid":"PBO:0026733"}


id: GO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(sn-glycero-3-phospho)-1D-myo-inositol + H2O = sn-glycerol 3-phosphate + myo-inositol + H+.","definition_xrefs":["RHEA:16501","EC:3.1.4.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerophosphoinositol glycerophosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R01193","MetaCyc:3.1.4.44-RXN","Reactome:R-HSA-6813740"],"synonyms":[{"name":"1-(sn-glycero-3-phospho)-1D-myo-inositol glycerophosphohydrolase activity","type":"related"},{"name":"sn-glycero(3)phosphoinositol glycerophosphohydrolase activity","type":"related"},{"name":"sn-glycero-3-phospho-1-inositol glycerophosphohydrolase activity","type":"related"}],"termid":"GO:0047395"}


id: GO:0043386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"mycotoxin metabolic process","termid":"GO:0043385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"mycotoxin biosynthetic process","synonyms":[{"name":"mycotoxin anabolism","type":"exact"},{"name":"mycotoxin biosynthesis","type":"exact"},{"name":"mycotoxin formation","type":"exact"},{"name":"mycotoxin synthesis","type":"exact"}],"termid":"GO:0043386"}


id: FYPO:0001399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle is normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle","synonyms":[{"name":"normal mitotic spindle during vegetative growth","type":"exact"},{"name":"normal spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001399"}


id: PBO:0012281
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SEC12","termid":"PBO:0012281"}


id: PBO:0054379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1775","termid":"PBO:0054379"}


id: GO:1901941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-epi-alpha-bisabolol.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(+)-epi-alpha-bisabolol metabolic process","synonyms":[{"name":"(+)-epi-alpha-bisabolol metabolism","type":"exact"}],"termid":"GO:1901941"}


id: GO:1904074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:24508636","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of trophectodermal cell proliferation","termid":"GO:1904073"},{"relation_name":"negatively_regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trophectodermal cell proliferation","synonyms":[{"name":"down regulation of trophectoderm cell proliferation","type":"exact"},{"name":"down regulation of trophectodermal cell proliferation","type":"exact"},{"name":"down-regulation of trophectoderm cell proliferation","type":"exact"},{"name":"down-regulation of trophectodermal cell proliferation","type":"exact"},{"name":"downregulation of trophectoderm cell proliferation","type":"exact"},{"name":"downregulation of trophectodermal cell proliferation","type":"exact"},{"name":"inhibition of trophectoderm cell proliferation","type":"narrow"},{"name":"inhibition of trophectodermal cell proliferation","type":"narrow"},{"name":"negative regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904074"}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: GO:0021925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to Purkinje cells. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem.","definition_xrefs":["GOC:dph","GOC:dgh","PMID:15157725","GOC:cls","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell precursor proliferation","termid":"GO:0021925"}


id: GO:0051927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051927)","synonyms":[{"name":"down regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"down-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"downregulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"inhibition of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"negative regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of calcium transport via voltage gated calcium channel","type":"related"}],"termid":"GO:0051927"}


id: GO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with serotonin and transmitting the signal across the membrane by activation of the Gq/11 subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gq/11 subunit subsequently activates phospholipase C and results in an increase in inositol triphosphate (IP3) levels.","definition_xrefs":["GOC:bf","GOC:mah","PMID:18571247","PMID:18703043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor activity","termid":"GO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"Gq/11-coupled serotonin receptor activity","synonyms":[{"name":"5-HT2 receptor activity","type":"broad"},{"name":"serotonin receptor activity, coupled via Gq/11","type":"exact"}],"termid":"GO:0001587"}


id: GO:0034951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: o-hydroxylaminobenzoate = 3-hydroxyanthranilate.","definition_xrefs":["UM-BBD_reactionID:r1026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"o-hydroxylaminobenzoate mutase activity","secondary_identifiers":["EC:5.4.99.-","MetaCyc:RXN-8846"],"termid":"GO:0034951"}


id: GO:1905036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an antifungal innate immune response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:dph","PMID:22470487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of antifungal innate immune response","termid":"GO:1905034"},{"relation_name":"positively_regulates","term_name":"antifungal innate immune response","termid":"GO:0061760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antifungal innate immune response","synonyms":[{"name":"activation of antifungal innate immune response","type":"narrow"},{"name":"up regulation of antifungal innate immune response","type":"exact"},{"name":"up-regulation of antifungal innate immune response","type":"exact"},{"name":"upregulation of antifungal innate immune response","type":"exact"}],"termid":"GO:1905036"}


id: PBO:0074354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC2 divergent transcript","termid":"PBO:0074354"}


id: GO:0010415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the mannan backbone, the unsubstituted polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"unsubstituted mannan metabolic process","synonyms":[{"name":"unsubstituted mannan metabolism","type":"exact"}],"termid":"GO:0010415"}


id: PATO:0001359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having many wrinkles or creases on the surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rugose","termid":"PATO:0001359"}


id: PBO:0041403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 89","termid":"PBO:0041403"}


id: SO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_gene_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:upstream","type":"related"},{"name":"Jannovar:upstream_gene_variant","type":"exact"},{"name":"VEP:upstream_gene_variant","type":"exact"},{"name":"snpEff:UPSTREAM","type":"exact"},{"name":"upstream gene variant","type":"exact"}],"termid":"SO:0001631"}


id: PBO:0068057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 362","termid":"PBO:0068057"}


id: PBO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0000457"}


id: PBO:0061467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2 pseudogene 2","termid":"PBO:0061467"}


id: GO:0033165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized extracellularc matrix that surrounds the photoreceptors of the retina and lies between them and the apical surface of the retinal pigment epithelium. The IPM has been implicated in several important activities required for photoreceptor function and maintenance.","definition_xrefs":["PMID:1862095","PMID:2194288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"interphotoreceptor matrix","termid":"GO:0033165"}


id: PBO:0088094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uncharacterized protein of unknown function","termid":"PBO:0088094"}


id: GO:2000744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of anterior head development","termid":"GO:2000742"},{"relation_name":"positively_regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior head development","termid":"GO:2000744"}


id: GO:0046194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete pentachlorophenol biosynthetic process (obsolete GO:0046194)","synonyms":[{"name":"pentachlorophenol anabolism","type":"exact"},{"name":"pentachlorophenol biosynthesis","type":"exact"},{"name":"pentachlorophenol biosynthetic process","type":"exact"},{"name":"pentachlorophenol formation","type":"exact"},{"name":"pentachlorophenol synthesis","type":"exact"}],"termid":"GO:0046194"}


id: PBO:0057369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ak","termid":"PBO:0057369"}


id: GO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["RHEA:16145","MetaCyc:1.14.18.2-RXN"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: GO:0042184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"xylene catabolic process","synonyms":[{"name":"xylene breakdown","type":"exact"},{"name":"xylene catabolism","type":"exact"},{"name":"xylene degradation","type":"exact"}],"termid":"GO:0042184"}


id: PBO:0006549
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YLL013C","termid":"PBO:0006549"}


id: PBO:0065197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 18","termid":"PBO:0065197"}


id: PBO:0071852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 47","termid":"PBO:0071852"}


id: PBO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 11","termid":"PBO:0072212"}


id: PBO:0083172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF PRP8/YHR165C","termid":"PBO:0083172"}


id: GO:0033952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,4-beta-D-linkages between D-galactose 4-sulfate and 3,6-anhydro-D-galactose-2-sulfate in iota-carrageenans.","definition_xrefs":["EC:3.2.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"iota-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.157-RXN"],"synonyms":[{"name":"iota-carrageenan 4-beta-D-glycanohydrolase (configuration-inverting) activity","type":"related"}],"termid":"GO:0033952"}


id: PBO:0082838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; required for ribosomal large subunit maturation; functionally redundant with Ssf2p; member of the Brix family; SSF1 has a paralog, SSF2, that arose from the whole genome duplication","termid":"PBO:0082838"}


id: GO:0097597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized organelle found in Giardia species (trophozoite stage) and characterized by a spiral array of microtubules and microtubule-associated structures including dorsal microribbons and crossbridges. The edge of the ventral disc narrows into a lateral crest. The ventral disk mediates mechanical attachment of the trophozoite to the host's intestinal wall, and contains the contractile proteins actinin, alpha-actinin, myosin, and tropomyosin working towards contraction of the disk involved in adherence.","definition_xrefs":["PMID:11432808","PMID:5961344","GOC:giardia","PMID:4777416","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc","synonyms":[{"name":"adhesive disc","type":"related"},{"name":"ventral adhesive disc","type":"exact"},{"name":"ventral disk","type":"related"}],"termid":"GO:0097597"}


id: PBO:0016904
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 RNA is transcribed with a 3' extension that is removed by post-transcriptional RNA processing","termid":"PBO:0016904"}


id: GO:0061379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior colliculus over time, from its formation to the mature structure. The inferior colliculus (IC) (Latin, lower hill) is the principal midbrain nucleus of the auditory pathway and receives input from several more peripheral brainstem nuclei in the auditory pathway, as well as inputs from the auditory cortex. The inferior colliculus has three subdivisions: the central nucleus (CIC), a dorsal cortex (DCIC) by which it is surrounded, and an external cortex (ICX) which is located laterally.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"corpora quadrigemina development","termid":"GO:0061378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior colliculus development","termid":"GO:0061379"}


id: GO:0072672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a neutrophil from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:BHF","CL:0000775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil extravasation","termid":"GO:0072672"}


id: PBO:0069380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 640, pseudogene","termid":"PBO:0069380"}


id: PBO:0064243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D2","termid":"PBO:0064243"}


id: GO:0004622
data:
  {"annotated_genes":["SJAG_03204","SJAG_02100","SJAG_02093","SJAG_01198","SJAG_02091","SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70835,85851,87557,89560,109300,109980],"is_not":false,"summary":null,"term":"GO:0004622"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate.","definition_xrefs":["EC:3.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01198":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"lysophospholipase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-1482612","Reactome:R-HSA-1482696","Reactome:R-HSA-1482545","MetaCyc:LYSOPHOSPHOLIPASE-RXN","Reactome:R-HSA-1482629","Reactome:R-HSA-6814766","Reactome:R-HSA-6814778","Reactome:R-HSA-1482685","Reactome:R-HSA-8847912","RHEA:15177","Reactome:R-HSA-6814254","GO:0045126","Reactome:R-HSA-1482571"],"synonyms":[{"name":"2-lysophosphatidylcholine acylhydrolase activity","type":"related"},{"name":"lecithinase B activity","type":"related"},{"name":"lecitholipase activity","type":"related"},{"name":"lysolecithinase activity","type":"related"},{"name":"lysophopholipase L2","type":"related"},{"name":"lysophosphatidase activity","type":"related"},{"name":"lysophosphatidylcholine hydrolase activity","type":"related"},{"name":"lysophospholipase A1","type":"related"},{"name":"phosphatidase B","type":"related"},{"name":"phospholipase B activity","type":"related"}],"termid":"GO:0004622","terms_by_termid":{"GO:0004622":null}}


id: FYPO:0001537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of iron ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular iron level","synonyms":[{"name":"normal cellular iron accumulation","type":"related"},{"name":"normal cellular iron ion level","type":"exact"},{"name":"normal cellular iron level during mitotic cell cycle","type":"related"},{"name":"normal cellular iron level during vegetative growth","type":"exact"}],"termid":"FYPO:0001537"}


id: GO:0007179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor superfamily signaling pathway","termid":"GO:0141091"},{"relation_name":"part_of","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transforming growth factor beta receptor signaling pathway","synonyms":[{"name":"TGF-beta receptor signaling pathway","type":"exact"},{"name":"TGF-beta receptor signalling pathway","type":"exact"},{"name":"TGFbeta receptor signaling pathway","type":"exact"},{"name":"TGFbeta receptor signalling pathway","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway","type":"exact"}],"termid":"GO:0007179"}


id: GO:1903391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adherens junction organization.","definition_xrefs":["GOC:TermGenie","PMID:21724833","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adherens junction organization","synonyms":[{"name":"regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"regulation of adherens junction organisation","type":"exact"}],"termid":"GO:1903391"}


id: PATO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quaity inhering in a bearer by virtue of the bearer's containing of or pertaining to fibrils, or nanoscale fibers.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillary","synonyms":[{"name":"fibrillate","type":"exact"}],"termid":"PATO:0002134"}


id: MOD:00519
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex1HexNAc2Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)Pent(1)","type":"related"},{"name":"Hex1HexNAc2Pent1","type":"related"}],"termid":"MOD:00519"}


id: SO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding cysteinyl tRNA (SO:0000258).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine_tRNA_primary_transcript","synonyms":[{"name":"cysteine tRNA primary transcript","type":"exact"}],"termid":"SO:0000215"}


id: PBO:0057944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3668","termid":"PBO:0057944"}


id: PBO:0109311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in liver cancer 1","termid":"PBO:0109311"}


id: PBO:0076666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem C2 domains, nuclear","termid":"PBO:0076666"}


id: PBO:0050540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 1","termid":"PBO:0050540"}


id: GO:0050600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11E)-delta11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA 11-(E)-desaturase activity","secondary_identifiers":["EC:1.14.19.24","MetaCyc:1.14.99.31-RXN"],"synonyms":[{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"myristoyl-CoA 11-(E) desaturase activity","type":"narrow"}],"termid":"GO:0050600"}


id: GO:0051650
data:
  {"annotated_genes":["SJAG_02431","SJAG_03011","SJAG_03703","SJAG_01925","SJAG_00938","SJAG_03864","SJAG_00284","SJAG_02320","SJAG_02166","SJAG_03938","SJAG_03357","SJAG_03268","SJAG_04044","SJAG_03005","SJAG_04391","SJAG_04001","SJAG_04960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112872,71415],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[113530],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[86457,112857,95067,84398,97405,113919,109393,109117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[70291,71079,75809,78212,73941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00938":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02431":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03703":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04001":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of vesicle localization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"establishment of vesicle localisation","type":"exact"}],"termid":"GO:0051650","terms_by_termid":{"GO:0030050":null,"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: PBO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 9 subunit","termid":"PBO:0043079"}


id: GO:1901050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of atropine.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete atropine catabolic process (obsolete GO:1901050)","synonyms":[{"name":"atropine breakdown","type":"exact"},{"name":"atropine catabolism","type":"exact"},{"name":"atropine degradation","type":"exact"}],"termid":"GO:1901050"}


id: GO:0045981
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nucleotide metabolic process","type":"narrow"},{"name":"positive regulation of nucleotide metabolism","type":"exact"},{"name":"stimulation of nucleotide metabolic process","type":"narrow"},{"name":"up regulation of nucleotide metabolic process","type":"exact"},{"name":"up-regulation of nucleotide metabolic process","type":"exact"},{"name":"upregulation of nucleotide metabolic process","type":"exact"}],"termid":"GO:0045981","terms_by_termid":{"GO:1905857":null}}


id: GO:0036425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O-phospho-D-serine + H2O = L-serine + phosphate, on a free amino acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete D-phosphoserine phosphatase activity (obsolete GO:0036425)","termid":"GO:0036425"}


id: GO:0102960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-9beta-pimara-7,15-diene-19,6beta-olide + NAD(P) = momilactone A + H+ + NAD(P)H.","definition_xrefs":["RHEA:25367","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"momilactone-A synthase activity","secondary_identifiers":["MetaCyc:RXN-9290","EC:1.1.1.295"],"termid":"GO:0102960"}


id: GO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3'-(1'-L-histidyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0270"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine (obsolete GO:0018152)","termid":"GO:0018152"}


id: PBO:0075814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 4","termid":"PBO:0075814"}


id: PBO:0062337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 76","termid":"PBO:0062337"}


id: PBO:0028101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alcohol_dehydrogenase_activity","termid":"PBO:0028101"}


id: PBO:0053037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE xylosyl- and glucuronyltransferase 2","termid":"PBO:0053037"}


id: FYPO:0000320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:vw","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, normal cell morphology","synonyms":[{"name":"inviable following spore germination, single cell division, normal cell morphology","type":"exact"},{"name":"inviable germinated spore, single cell division, normal cell morphology","type":"exact"},{"name":"lethal after spore germination, single cell division, normal cell morphology","type":"exact"}],"termid":"FYPO:0000320"}


id: GO:0004708
data:
  {"annotated_genes":["SJAG_01181","SJAG_02342","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71562,87837,106278],"is_not":false,"summary":null,"term":"GO:0004708"}]},"cv_name":"molecular_function","definition":"Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine/tyrosine kinase activity","termid":"GO:0004712"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0003674","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"MAP kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-450333","Reactome:R-HSA-3238999","Reactome:R-HSA-448951","MetaCyc:2.7.12.2-RXN","EC:2.7.12.2","Reactome:R-HSA-1247960","Reactome:R-HSA-5218804"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKKK-activated) activity","type":"related"},{"name":"ERK activator kinase activity","type":"exact"},{"name":"MAP kinase kinase 4 activity","type":"narrow"},{"name":"MAP kinase kinase 7 activity","type":"narrow"},{"name":"MAP kinase or ERK kinase activity","type":"related"},{"name":"MAP2K","type":"related"},{"name":"MAPK activator activity","type":"exact"},{"name":"MAPKK","type":"related"},{"name":"MAPKK activity","type":"exact"},{"name":"MAPKK1","type":"related"},{"name":"MEK activity","type":"broad"},{"name":"MEK1","type":"related"},{"name":"MEK2","type":"related"},{"name":"MKK","type":"related"},{"name":"MKK2","type":"related"},{"name":"MKK4","type":"related"},{"name":"MKK6","type":"related"},{"name":"MKK7","type":"related"},{"name":"STK27","type":"related"},{"name":"mitogen-activated protein kinase kinase activity","type":"related"}],"termid":"GO:0004708","terms_by_termid":{"GO:0004708":null}}


id: PBO:0064430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 7","termid":"PBO:0064430"}


id: GO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a mitotic cell cycle G1/S transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in mitotic G1 DNA damage checkpoint (obsolete GO:0072430)","synonyms":[{"name":"detection of DNA damage stimulus involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"related"}],"termid":"GO:0072430"}


id: GO:0042800
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 4) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 4). This reaction is the addition of up to three methyl groups to the lysine residue at position 4 of the histone H3 protein.","definition_xrefs":["PMID:12086618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0008276","GO:0003674","GO:0140096","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"histone H3K4 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8937050","Reactome:R-HSA-3364026","Reactome:R-HSA-8865498","Reactome:R-HSA-8936621","Reactome:R-HSA-1214188","Reactome:R-HSA-8936481","Reactome:R-HSA-8937016"],"synonyms":[{"name":"histone H3 lysine 4-specific methyltransferase activity","type":"exact"},{"name":"histone H3K4 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K4 specific)","type":"exact"},{"name":"histone methylase activity (H3-K4 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K4 specific)","type":"exact"},{"name":"histone-H3K4 methyltransferase activity","type":"exact"}],"termid":"GO:0042800","terms_by_termid":{"GO:0140999":null}}


id: PR:O74920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vph2 gene.","definition_xrefs":["UniProtKB:O74920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly integral membrane protein vph2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.10","synonyms":[{"name":"Spom972h-vph2","type":"exact"}],"termid":"PR:O74920"}


id: GO:0033034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid cell apoptotic process","synonyms":[{"name":"activation of myeloid cell apoptosis","type":"narrow"},{"name":"positive regulation of myeloid cell apoptosis","type":"narrow"},{"name":"stimulation of myeloid cell apoptosis","type":"narrow"},{"name":"up regulation of myeloid cell apoptosis","type":"exact"},{"name":"up-regulation of myeloid cell apoptosis","type":"exact"},{"name":"upregulation of myeloid cell apoptosis","type":"exact"}],"termid":"GO:0033034"}


id: FYPO:0007598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at a site where silencing can normally be triggered by the ectopic tethering of a protein.","definition_xrefs":["PomBase:mah","PMID:23613586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abolished chromatin silencing at ectopic tethering site","synonyms":[{"name":"abolished chromatin silencing at ectopic tethering site during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at ectopic tethering site during vegetative growth","type":"exact"}],"termid":"FYPO:0007598"}


id: GO:1901533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"negatively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"down regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"downregulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of hematopoietic progenitor cell differentiation","type":"related"},{"name":"inhibition of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"negative regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901533"}


id: PBO:0056120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 7","termid":"PBO:0056120"}


id: PBO:0016885
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific","termid":"PBO:0016885"}


id: PBO:0071978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 7","termid":"PBO:0071978"}


id: PBO:0061255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase trafficking","termid":"PBO:0061255"}


id: GO:0033391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182).","definition_xrefs":["PMID:17183363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromatoid body","termid":"GO:0033391"}


id: GO:0106371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + primary fluorescent chlorophyll catabolite + reduced [NADPH--hemoprotein reductase] = formate + 2 H+ + oxidized [NADPH--hemoprotein reductase] + primary fluorescent dioxobilin-type chlorophyll catabolite.","definition_xrefs":["RHEA:67172","PMID:23723324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fluorescent chlorophyll catabolite monooxygenase (deformylase) activity","termid":"GO:0106371"}


id: PBO:0079721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin domain containing 1","termid":"PBO:0079721"}


id: GO:0097636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf","GOC:autophagy"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of autophagosome membrane (obsolete GO:0097636)","synonyms":[{"name":"intrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"intrinsic to autophagic vacuole membrane","type":"narrow"}],"termid":"GO:0097636"}


id: GO:0004641
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70865],"is_not":false,"summary":null,"term":"GO:0004641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:23032","EC:6.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylformylglycinamidine cyclo-ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:AIRS-RXN","Reactome:R-HSA-73810","KEGG_REACTION:R04208"],"synonyms":[{"name":"2-(formamido)-1-N-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"2-(formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"5'-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"AIR synthase activity","type":"related"},{"name":"AIR synthetase activity","type":"related"},{"name":"AIRS activity","type":"related"},{"name":"phosphoribosyl-aminoimidazole synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazole synthetase activity","type":"related"}],"termid":"GO:0004641","terms_by_termid":{"GO:0004641":null}}


id: GO:0008350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete kinetochore motor activity (obsolete GO:0008350)","synonyms":[{"name":"kinetochore motor activity","type":"exact"}],"termid":"GO:0008350"}


id: FYPO:0003975
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114361],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear envelope is broken into multiple small fragments, none of which completely surrounds the contents of the nucleus.","definition_xrefs":["PMID:7877997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"},{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002403","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"fragmented nuclear envelope","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"disrupted nuclear envelope","type":"related"},{"name":"disrupted nuclear membrane","type":"related"},{"name":"fragmented nuclear envelope during mitotic cell cycle","type":"related"},{"name":"fragmented nuclear envelope during vegetative growth","type":"exact"},{"name":"fragmented nuclear membrane","type":"related"}],"termid":"FYPO:0003975","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003976":null}}


id: GO:0021870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires specialized structural and/or functional features of a Cajal-Retzius cell, one of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex neuron differentiation","termid":"GO:0021895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Cajal-Retzius cell differentiation","termid":"GO:0021870"}


id: PBO:0004614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in trancription (predicted)","termid":"PBO:0004614"}


id: MOD:00451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a propanoyl group.","definition_xrefs":["Unimod:58#N-term","PubMed:11857757","PubMed:11999733","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:00451"}


id: PBO:0090652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit 3/5","termid":"PBO:0090652"}


id: PBO:0053040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP1B pseudogene 1","termid":"PBO:0053040"}


id: PBO:0081702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 623","termid":"PBO:0081702"}


id: PBO:0074507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 5 pseudogene 1","termid":"PBO:0074507"}


id: PATO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light purple","termid":"PATO:0001260"}


id: GO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting immunoglobulin, via transcytosis, from one side of an epithelial cell to the other.","definition_xrefs":["PMID:16048543","ISBN:0781735149","ISBN:081533642X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"}


id: GO:0009972
data:
  {"annotated_genes":["SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70149],"is_not":false,"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The removal of amino group in the presence of water.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine catabolic process","termid":"GO:0006216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0044248"],"is_obsolete":false,"name":"cytidine deamination","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0009972","terms_by_termid":{"GO:0009972":null}}


id: GO:0010299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of cobalt ion. These include transport of cobalt away from sensitive areas and to compartments or complexes whose purpose is sequestration of cobalt ion.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to cobalt ion","termid":"GO:0032025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of cobalt ion","termid":"GO:0010299"}


id: PBO:0030150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_diethyl_maleate","termid":"PBO:0030150"}


id: PBO:0061746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1","termid":"PBO:0061746"}


id: PBO:0082831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved ribosomal protein P0 of the ribosomal stalk; involved in interaction between translational elongation factors and the ribosome; phosphorylated on serine 302; homologous to mammalian ribosomal protein LP0 and bacterial L10","termid":"PBO:0082831"}


id: GO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-tRNA(Sec) = ADP + O-phospho-L-seryl-tRNA(Sec).","definition_xrefs":["PMID:16201757","GOC:jl","RHEA:25037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140101","GO:0003824","GO:0016301","GO:0140098"],"is_obsolete":false,"name":"L-seryl-tRNA(Sec) kinase activity","secondary_identifiers":["EC:2.7.1.164","MetaCyc:RXN-10038"],"synonyms":[{"name":"O-phosphoseryl-tRNA(Sec) kinase activity","type":"exact"}],"termid":"GO:0043915"}


id: _global:causal_relation_between_material_entity_and_a_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","secondary_identifiers":["RO:0002595"],"termid":"_global:causal_relation_between_material_entity_and_a_process"}


id: PBO:0073662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINHCAF pseudogene 2","termid":"PBO:0073662"}


id: PBO:0082451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2H2-type zinc finger protein required for ribosome assembly; shuttling factor which associates with pre-60S particles in the nucleus, accompanying them to the cytoplasm; cytoplasmic dissociation of Bud20p requires Drg1p; N-terminus harbors a nuclear localization signal (NLS) and a nuclear export signal (NES); cytoplasmic Bud20p is reimported by Kap123-dependent pathway; involved in bud-site selection; diploid mutants display a random budding pattern; similar to human ZNF593","termid":"PBO:0082451"}


id: PBO:0081236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 2","termid":"PBO:0081236"}


id: GO:1990374
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A inward rectifier potassium channel complex. Homo- or heterotetramer composed of subunits of the eukaryotic Kir2 protein family. Plays a key role in maintaining the correct resting potential in eukaryotic cells.","definition_xrefs":["GOC:bhm","PMID:16834334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Kir2 inward rectifier potassium channel complex","synonyms":[{"name":"Kir2.1 complex","type":"narrow"}],"termid":"GO:1990374"}


id: FYPO:0006320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the increase in small deletions or duplications (\\\"replication slippage\\\") that normally results from processing arrested replication forks is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal replication slippage during replication fork processing","synonyms":[{"name":"normal replication slippage during replication fork processing during vegetative growth","type":"related"},{"name":"normal replication slippage during replication fork processing during vegetative growth during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006320"}


id: GO:0005829
data:
  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id: GO:0062014
data:
  {"annotated_genes":["SJAG_03130","SJAG_00685","SJAG_05314","SJAG_02380","SJAG_02104","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[71069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[72781,75457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[106656,110670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a small molecule metabolic process.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"negatively_regulates","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of small molecule metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"negative regulation of small molecule metabolism","type":"exact"}],"termid":"GO:0062014","terms_by_termid":{"GO:0010895":null,"GO:0045717":null,"GO:0045820":null,"GO:2001211":null}}


id: GO:2000724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"is_a","term_name":"regulation of cardiac vascular smooth muscle cell differentiation","termid":"GO:2000722"},{"relation_name":"positively_regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"positive regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000724"}


id: PBO:0048205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta3","termid":"PBO:0048205"}


id: FYECO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethylenediaminetetraacetic acid (EDTA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ EDTA","synonyms":[{"name":"EDTA added","type":"exact"},{"name":"ethylenediaminetetraacetic acid added","type":"exact"}],"termid":"FYECO:0000176"}


id: PBO:0003650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S28 (predicted)","termid":"PBO:0003650"}


id: PBO:0050265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 43","termid":"PBO:0050265"}


id: PBO:0054315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1707","termid":"PBO:0054315"}


id: GO:0060157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the urinary bladder over time, from its formation to the mature structure. The urinary bladder is an elastic, muscular sac situated in the anterior part of the pelvic cavity in which urine collects before excretion.","definition_xrefs":["GOC:ln","PMID:11768524","GOC:dph","GOC:mr","PMID:538956","PMID:18276178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder development","termid":"GO:0060157"}


id: FYPO:0005337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H3-K9K14 acetylation during vegetative growth (obsolete FYPO:0005337)","synonyms":[{"name":"increased histone H3 K9K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9K14 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone lysine H3 K9K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005337"}


id: PBO:0058731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-1","termid":"PBO:0058731"}


id: PBO:0039654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit sigma 2","termid":"PBO:0039654"}


id: PBO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(p14)","termid":"PBO:0047884"}


id: PBO:0041847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASK interacting protein 1","termid":"PBO:0041847"}


id: PR:O13818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19A8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PH domain-containing protein C19A8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.02","synonyms":[{"name":"Spom972h-SPAC19A8.02","type":"exact"}],"termid":"PR:O13818"}


id: GO:0061971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of another structural tissue into bone.","definition_xrefs":["PMID:29852585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replacement bone morphogenesis","termid":"GO:0061971"}


id: PBO:0052500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 12","termid":"PBO:0052500"}


id: PBO:0004982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 1","termid":"PBO:0004982"}


id: PBO:0085146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar serine-rich protein; role in preribosome assembly or transport; may function as a chaperone of small nucleolar ribonucleoprotein particles (snoRNPs); immunologically and structurally to rat Nopp140","termid":"PBO:0085146"}


id: GO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002109"}


id: PBO:0082794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U4/U6.U5 snRNP complex; involved in mRNA splicing via spliceosome","termid":"PBO:0082794"}


id: PATO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outward.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed","synonyms":[{"name":"flared","type":"exact"}],"termid":"PATO:0001785"}


id: PBO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates srk1","termid":"PBO:0001195"}


id: GO:0043617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sucrose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sucrose starvation","termid":"GO:0043617"}


id: GO:1905741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium release that is involved in positive regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:26644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"calcium export from the mitochondrion","termid":"GO:0099093"},{"relation_name":"part_of","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"calcium export from the mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium release involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905741"}


id: PBO:0070806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 36","termid":"PBO:0070806"}


id: GO:0018147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a protein via L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum incorporation into molybdenum-molybdopterin complex","termid":"GO:0018315"},{"relation_name":"is_a","term_name":"peptidyl-selenocysteine modification","termid":"GO:0050844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation via L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","termid":"GO:0018147"}


id: PBO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn2 (predicted)","termid":"PBO:0004456"}


id: PBO:0085867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has strong similarity to alanyl-tRNA synthases from Eubacteria; null mutant displays decreased translation rate and increased readthrough of premature stop codons; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YNL040W is not an essential gene","termid":"PBO:0085867"}


id: PBO:0048131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 11","termid":"PBO:0048131"}


id: MOD:01431
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a (2)H labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}


id: PBO:0071942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 19","termid":"PBO:0071942"}


id: GO:0043698
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which purines crystalize in reflective stacks. Iridosomes are synthesized in iridophore cells and are silver, gold or iridescent in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"iridosome","synonyms":[{"name":"reflecting platelet","type":"exact"}],"termid":"GO:0043698"}


id: PBO:0073565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing E","termid":"PBO:0073565"}


id: PBO:0012243
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains FLEX elelment","termid":"PBO:0012243"}


id: GO:0061007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An system process carried out by any of the organs or tissues of the hepaticobiliary system. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepaticobiliary system process","synonyms":[{"name":"hepatobiliary system process","type":"exact"}],"termid":"GO:0061007"}


id: GO:0006915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["GOC:tb","GOC:go_curators","PMID:18846107","GOC:dhl","ISBN:0198506732","PMID:21494263","GOC:mtg_apoptosis","GOC:ecd","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process","secondary_identifiers":["Wikipedia:Apoptosis","GO:0006917","GO:0008632"],"synonyms":[{"name":"activation of apoptosis","type":"narrow"},{"name":"apoptosis","type":"narrow"},{"name":"apoptosis activator activity","type":"related"},{"name":"apoptosis signaling","type":"narrow"},{"name":"apoptotic cell death","type":"exact"},{"name":"apoptotic program","type":"narrow"},{"name":"apoptotic programmed cell death","type":"exact"},{"name":"caspase-dependent programmed cell death","type":"related"},{"name":"cell suicide","type":"broad"},{"name":"cellular suicide","type":"broad"},{"name":"commitment to apoptosis","type":"related"},{"name":"induction of apoptosis","type":"related"},{"name":"induction of apoptosis by p53","type":"related"},{"name":"programmed cell death by apoptosis","type":"exact"},{"name":"signaling (initiator) caspase activity","type":"related"},{"name":"type I programmed cell death","type":"narrow"}],"termid":"GO:0006915"}


id: GO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD81, a member of the tetraspan family.","definition_xrefs":["PMID:10229664","PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD81 complex","synonyms":[{"name":"ITGA4-ITGB1-CD81 complex","type":"narrow"}],"termid":"GO:0070520"}


id: PBO:0002730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx1","termid":"PBO:0002730"}


id: GO:0106409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',3'-c-di-AMP + H2O = 5'-O-phosphonoadenylyl-(3'-5')-adenosine + H+.","definition_xrefs":["RHEA:54420","PMID:21909268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclic-di-AMP phosphodiesterase activity","secondary_identifiers":["MetaCyc:RXN-19814","EC:3.1.4.59"],"termid":"GO:0106409"}


id: PR:P36617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair endonuclease XPF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10150:SF0","OMA:SCHPO04346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.01","secondary_identifiers":["UniProtKB:P36617"],"synonyms":[{"name":"Spom972h-ERCC4","type":"exact"}],"termid":"PR:P36617"}


id: GO:0075101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075101)","termid":"GO:0075101"}


id: PBO:0027131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_early_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0027131"}


id: FYPO:0005490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to vacuole","synonyms":[{"name":"abnormal protein localisation to vacuole","type":"exact"},{"name":"abnormal protein localization in vacuole","type":"exact"},{"name":"abnormal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005490"}


id: PBO:0030984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_methylation","termid":"PBO:0030984"}


id: PBO:0083775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear protein; constituent of 66S pre-ribosomal particles; required for maturation of 25S and 5.8S rRNAs; required for maintenance of M1 satellite double-stranded RNA of the L-A virus","termid":"PBO:0083775"}


id: PBO:0049592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 10","termid":"PBO:0049592"}


id: PBO:0040525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antizyme inhibitor 2","termid":"PBO:0040525"}


id: GO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of heart contraction, changing the force with which blood is propelled.","definition_xrefs":["GOC:dph","PMID:10358008","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction","synonyms":[{"name":"cardiac inotropy","type":"exact"},{"name":"heart inotropy","type":"exact"}],"termid":"GO:0002026"}


id: PBO:0049548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 11","termid":"PBO:0049548"}


id: PBO:0040393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 1","termid":"PBO:0040393"}


id: GO:0070982
data:
  {"annotated_genes":["SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-asparagine, (2S)-2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-asparagine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-asparagine metabolism","type":"exact"}],"termid":"GO:0070982","terms_by_termid":{"GO:0070981":null}}


id: PR:Q9C0X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.15c","synonyms":[{"name":"Spom972h-SPBC13G1.15c","type":"exact"}],"termid":"PR:Q9C0X3"}


id: GO:0033990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-acetyl-L-2,4-diaminobutyrate = ectoine + H2O.","definition_xrefs":["EC:4.2.1.108","RHEA:17281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ectoine synthase activity","secondary_identifiers":["KEGG_REACTION:R06979","MetaCyc:R103-RXN"],"synonyms":[{"name":"4-N-acetyl-L-2,4-diaminobutanoate hydro-lyase (L-ectoine-forming) activity","type":"related"},{"name":"EctC","type":"related"},{"name":"L-ectoine synthase activity","type":"related"},{"name":"N-acetyldiaminobutanoate dehydratase activity","type":"related"},{"name":"N-acetyldiaminobutyrate dehydratase activity","type":"related"},{"name":"N4-acetyl-L-2,4-diaminobutanoate hydro-lyase (L-ectoine-forming) activity","type":"related"}],"termid":"GO:0033990"}


id: GO:0014831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the gastro-intestinal system. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The gastro-intestinal system generally refers to the digestive structures stretching from the mouth to anus, but does not include the accessory glandular organs (liver, pancreas and biliary tract).","definition_xrefs":["GOC:mtg_muscle","MSH:D041981","MA:0001523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}


id: PBO:0087974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trimethyl guanosine synthase, conserved nucleolar methyl transferase; converts the m(7)G cap structure of snRNAs, snoRNAs, and telomerase TLC1 RNA to m(2,2,7)G; also required for nucleolar assembly and splicing of meiotic pre-mRNAs; interacts with Swm2p, which may confer substrate specificity on Tgs1p","termid":"PBO:0087974"}


id: PBO:0064028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 62","termid":"PBO:0064028"}


id: GO:0070593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which dendrites recognize and avoid contact with sister dendrites from the same cell.","definition_xrefs":["GOC:sart","PMID:17482551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite self-avoidance","synonyms":[{"name":"dendrite repulsion","type":"exact"}],"termid":"GO:0070593"}


id: PBO:0054427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1823","termid":"PBO:0054427"}


id: GO:0098999
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"extrinsic component of postsynaptic endosome membrane","termid":"GO:0098999"}


id: GO:0004239
data:
  {"annotated_genes":["SJAG_02033","SJAG_06636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98734,105368],"is_not":false,"summary":null,"term":"GO:0004239"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of N-terminal initiator methionine from peptides.","definition_xrefs":["EC:3.4.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02033":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"initiator methionyl aminopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.4.11.18-RXN"],"synonyms":[{"name":"L-methionine aminopeptidase activity","type":"related"},{"name":"MAP","type":"related"},{"name":"methionine aminopeptidase activity","type":"related"},{"name":"peptidase M activity","type":"related"}],"termid":"GO:0004239","terms_by_termid":{"GO:0004239":null}}


id: SO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_noncoding_exon","synonyms":[{"name":"three prime noncoding exon","type":"exact"}],"termid":"SO:0000444"}


id: PBO:0053944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1247","termid":"PBO:0053944"}


id: GO:0046492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme b, a Fe(II) porphyrin complex readily isolated from the hemoglobin of beef blood, but also found in other proteins including other hemoglobins, myoglobins, cytochromes P-450, catalases, peroxidases as well as b type cytochromes.","definition_xrefs":["PMID:29414780","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme B metabolic process","synonyms":[{"name":"haem B metabolic process","type":"exact"},{"name":"haem B metabolism","type":"exact"},{"name":"heme B metabolism","type":"exact"},{"name":"protoheme metabolic process","type":"exact"},{"name":"protoheme metabolism","type":"exact"}],"termid":"GO:0046492"}


id: PBO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 104 pseudogene","termid":"PBO:0070186"}


id: GO:0060532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of lung cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"},{"relation_name":"part_of","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus cartilage development","synonyms":[{"name":"pulmonary cartilage development","type":"exact"}],"termid":"GO:0060532"}


id: PBO:0035871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_telomere_during_vegetative_growth","termid":"PBO:0035871"}


id: PBO:0004244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase proenzyme Spe2","termid":"PBO:0004244"}


id: PBO:0069418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 680, pseudogene","termid":"PBO:0069418"}


id: PBO:0070671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 42","termid":"PBO:0070671"}


id: GO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the optic placode over time, from its formation to the mature structure. During embryonic stage 12 the placode starts to invaginate, forming a pouch. Cells that will form Bolwig's organ segregate from the ventral lip of this pouch, remaining in the head epidermis. The remainder of the invagination loses contact with the outer surface and becomes the optic lobe. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:8402833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect visual primordium development","secondary_identifiers":["GO:0048049"],"synonyms":[{"name":"optic lobe and Bolwig's organ precursor development","type":"exact"},{"name":"optic lobe placode development","type":"exact"},{"name":"optic placode development","type":"broad"}],"termid":"GO:0001748"}


id: FYPO:0001842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylyl cyclase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal adenylyl cyclase activity","termid":"FYPO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased adenylyl cyclase activity","synonyms":[{"name":"increased adenylate cyclase activity","type":"exact"}],"termid":"FYPO:0001842"}


id: GO:2000494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-18-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-18-mediated signaling pathway","termid":"GO:2000492"},{"relation_name":"positively_regulates","term_name":"interleukin-18-mediated signaling pathway","termid":"GO:0035655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-18-mediated signaling pathway","synonyms":[{"name":"positive regulation of interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:2000494"}


id: PBO:0041636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 3","termid":"PBO:0041636"}


id: PBO:0067853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 155","termid":"PBO:0067853"}


id: PBO:0086668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; predicted to have a role in transcription based on computational 'guilt by association' analysis","termid":"PBO:0086668"}


id: PBO:0017823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2 (predicted)","termid":"PBO:0017823"}


id: PBO:0079522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRO3P protein tyrosine kinase pseudogene","termid":"PBO:0079522"}


id: PBO:0030161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylinositol_level","termid":"PBO:0030161"}


id: PBO:0060047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 35","termid":"PBO:0060047"}


id: PBO:0027280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_recombination_at_M26_site","termid":"PBO:0027280"}


id: PBO:0051302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-42 (non-functional)","termid":"PBO:0051302"}


id: MOD:01992
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and the alpha-carbon of another amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"}


id: PBO:0048277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 13","termid":"PBO:0048277"}


id: PBO:0072882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 1 pseudogene 1","termid":"PBO:0072882"}


id: GO:0047101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [a branched-chain alpha-keto acid] + CoA + NAD+ = [a branched-chain acyl-CoA] + CO2 + NADH. This enzyme system catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs.","definition_xrefs":["EC:1.2.1.25","MetaCyc:1.2.1.25-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"branched-chain alpha-keto acid dehydrogenase activity","synonyms":[{"name":"2-oxoisovalerate dehydrogenase (acylating) activity","type":"narrow"},{"name":"2-oxoisovalerate dehydrogenase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:NAD+ 2-oxidoreductase (CoA-methyl-propanoylating)","type":"related"}],"termid":"GO:0047101"}


id: GO:0060919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of auxins from outside of a cell into a cell.","definition_xrefs":["PMID:22773749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"auxin import into cell","synonyms":[{"name":"auxin influx","type":"broad"}],"termid":"GO:0060919"}


id: GO:0016494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-X-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif.","definition_xrefs":["GOC:signaling","PMID:8662823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-X-C chemokine receptor activity","termid":"GO:0016494"}


id: PBO:0061770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OBI1 antisense RNA 1","termid":"PBO:0061770"}


id: PBO:0075513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 4","termid":"PBO:0075513"}


id: GO:0072331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling process that is induced by the cell cycle regulator phosphoprotein p53 or an equivalent protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal transduction by p53 class mediator","termid":"GO:0072331"}


id: GO:0052083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of the cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation of host cell-mediated immune response","termid":"GO:0052155"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by symbiont of host cell-mediated immune response","secondary_identifiers":["GO:0052278"],"synonyms":[{"name":"down regulation by symbiont of host cell-mediated immune response","type":"exact"},{"name":"down-regulation by symbiont of host cell-mediated immune response","type":"exact"},{"name":"downregulation by symbiont of host cell-mediated immune response","type":"exact"},{"name":"inhibition by symbiont of host cell-mediated immune response","type":"narrow"},{"name":"negative regulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of host cell-based immune response","type":"exact"}],"termid":"GO:0052083"}


id: PBO:0089422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim44","termid":"PBO:0089422"}


id: GO:1990751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a Schwann cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["PMID:16203995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schwann cell migration","termid":"GO:0036135"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell chemotaxis","termid":"GO:1990751"}


id: MOD:01259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9448752","Unimod:314#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide - site K","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01259"}


id: GO:0047462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + ATP + H2O = D-phenylalanine + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:5.1.1.11","RHEA:20201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylalanine racemase (ATP-hydrolyzing) activity","secondary_identifiers":["KEGG_REACTION:R00686","MetaCyc:5.1.1.11-RXN"],"synonyms":[{"name":"gramicidin S synthetase I","type":"related"},{"name":"phenylalanine racemase (ATP-hydrolysing)","type":"broad"},{"name":"phenylalanine racemase (adenosine triphosphate-hydrolysing)","type":"related"},{"name":"phenylalanine racemase activity","type":"related"}],"termid":"GO:0047462"}


id: PBO:0067328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 419, pseudogene","termid":"PBO:0067328"}


id: FYPO:0001807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of adenine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal adenine import","synonyms":[{"name":"abnormal adenine import across plasma membrane","type":"exact"},{"name":"abnormal adenine import during mitotic cell cycle","type":"related"},{"name":"abnormal adenine import during vegetative growth","type":"exact"},{"name":"abnormal adenine import into cell","type":"exact"},{"name":"abnormal adenine uptake","type":"exact"}],"termid":"FYPO:0001807"}


id: GO:0004392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heme b + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = biliverdin + CO + Fe2+ + H+ + 3 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:21764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"heme oxygenase (decyclizing) activity","secondary_identifiers":["MetaCyc:HEME-OXYGENASE-DECYCLIZING-RXN","EC:1.14.14.18","Reactome:R-HSA-189398"],"synonyms":[{"name":"ORP33 proteins","type":"related"},{"name":"haem oxidase activity","type":"related"},{"name":"haem oxygenase (decyclizing) activity","type":"exact"},{"name":"haem oxygenase activity","type":"related"},{"name":"heme oxidase activity","type":"related"},{"name":"heme oxygenase activity","type":"related"},{"name":"heme,hydrogen-donor:oxygen oxidoreductase (alpha-methene-oxidizing, hydroxylating)","type":"related"}],"termid":"GO:0004392"}


id: GO:0048334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"}


id: PBO:0069200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 454, pseudogene","termid":"PBO:0069200"}


id: PBO:0017896
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Int6","termid":"PBO:0017896"}


id: PBO:0075222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 1","termid":"PBO:0075222"}


id: PBO:0076433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 9","termid":"PBO:0076433"}


id: GO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein oxidation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein oxidation","termid":"GO:0034442"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein metabolic process","termid":"GO:0050748"},{"relation_name":"negatively_regulates","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein oxidation","synonyms":[{"name":"inhibition of lipoprotein oxidation","type":"narrow"}],"termid":"GO:0034443"}


id: PBO:0058565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6507","termid":"PBO:0058565"}


id: PBO:0084767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NADH kinase; phosphorylates NADH; also phosphorylates NAD(+) with lower specificity; required for the response to oxidative stress","termid":"PBO:0084767"}


id: FYPO:0005321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable contains one nucleus, has no septum, is elongated, and progression through the mitotic cell cycle is arrested in mitotic metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell cycle arrest in mitotic metaphase","termid":"FYPO:0000620"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic metaphase","termid":"FYPO:0000620"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate aseptate cell with cell cycle arrest in mitotic M phase","termid":"FYPO:0003128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000004","FYPO:0000631","FYPO:0000005","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest in mitotic metaphase","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest in metaphase during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic metaphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested in metaphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in metaphase during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic metaphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest in metaphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic metaphase arrest","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic nuclear division arrest in metaphase","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic metaphase","type":"exact"},{"name":"mitotic cell cycle arrest in metaphase with elongated inviable mononucleate aseptate cell","type":"exact"},{"name":"mitotic metaphase arrested elongated inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"nuclear division arrest in metaphase without septation (elongated cell)","type":"exact"}],"termid":"FYPO:0005321"}


id: PBO:0080238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 1","termid":"PBO:0080238"}


id: GO:1902675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left ventral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["ISBN:9780124260207","GOC:TermGenie","PMID:5961344","PMID:16607022","GOC:giardia","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left ventral flagellum","termid":"GO:0097558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"left ventral basal body","synonyms":[{"name":"cilial basal body of left ventral cilium","type":"exact"},{"name":"cilial basal body of left ventral flagellum","type":"exact"},{"name":"ciliary basal body of left ventral cilium","type":"exact"},{"name":"ciliary basal body of left ventral flagellum","type":"exact"},{"name":"cilium basal body of left ventral cilium","type":"exact"},{"name":"cilium basal body of left ventral flagellum","type":"exact"},{"name":"left ventral flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left ventral cilium","type":"exact"},{"name":"microtubule basal body of left ventral flagellum","type":"exact"}],"termid":"GO:1902675"}


id: GO:0018482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-formylbenzenesulfonate + H2O + NAD+ = 4-sulfobenzoate + 2 H+ + NADH.","definition_xrefs":["EC:1.2.1.62","RHEA:18833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-formylbenzenesulfonate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05272","MetaCyc:SYDDEHYD-RXN","UM-BBD_reactionID:r0292"],"synonyms":[{"name":"4-formylbenzenesulfonate:NAD+ oxidoreductase activity","type":"related"},{"name":"4-formylbenzenesulphonate dehydrogenase activity","type":"exact"},{"name":"toluene-sulfonate aldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0018482"}


id: GO:0140629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a small conductance calcium-activated potassium channel.","definition_xrefs":["PMID:20562108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel inhibitor activity","termid":"GO:0140629"}


id: GO:1901497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diphenyl ether stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diphenyl ether","termid":"GO:1901497"}


id: PBO:0056794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 3","termid":"PBO:0056794"}


id: GO:0070699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II activin receptor.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor binding","termid":"GO:0070697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type II activin receptor binding","termid":"GO:0070699"}


id: GO:0051700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fructosyl-amino acid + O2 = corresponding amino acid + glucosone + H2O2.","definition_xrefs":["PMID:16233628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructosyl-amino acid oxidase activity","synonyms":[{"name":"FAOD activity","type":"exact"}],"termid":"GO:0051700"}


id: GO:1903740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["PMID:25359770","GO_REF:0000059","GOC:TermGenie","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"regulation of phosphatidate phosphatase activity","termid":"GO:1903730"},{"relation_name":"part_of","term_name":"positive regulation of triglyceride biosynthetic process","termid":"GO:0010867"},{"relation_name":"part_of","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidate phosphatase activity","synonyms":[{"name":"activation of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidate phosphatase activity","type":"narrow"},{"name":"activation of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"positive regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"upregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903740"}


id: PBO:0058818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7975","termid":"PBO:0058818"}


id: PBO:0087027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L13A; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13A has a paralog, RPL13B, that arose from the whole genome duplication","termid":"PBO:0087027"}


id: PBO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C17orf28 ortholog 2","termid":"PBO:0004240"}


id: PBO:0052140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 7","termid":"PBO:0052140"}


id: PBO:0073714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 1","termid":"PBO:0073714"}


id: FYPO:0000452
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abnormal protein localization to chromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000452","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:0060154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cellular process that modulates the rate or extent of progression through the cell cycle in response to a virus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular process regulating host cell cycle in response to virus (obsolete GO:0060154)","termid":"GO:0060154"}


id: GO:0090630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of GTPase activity","termid":"GO:0043547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of GTPase activity","secondary_identifiers":["GO:0032863","GO:0032862","GO:0032860","GO:0032864","GO:0032856","GO:0032858","GO:0032859","GO:0032861","GO:0032857"],"synonyms":[{"name":"ARF GTPase activation","type":"narrow"},{"name":"Cdc42 GTPase activation","type":"narrow"},{"name":"Rab GTPase activation","type":"narrow"},{"name":"Rac GTPase activation","type":"narrow"},{"name":"Ral GTPase activation","type":"narrow"},{"name":"Ran GTPase activation","type":"narrow"},{"name":"Rap GTPase activation","type":"narrow"},{"name":"Ras GTPase activation","type":"narrow"},{"name":"Rho GTPase activation","type":"narrow"},{"name":"activation of ARF GTPase activity","type":"narrow"},{"name":"activation of Cdc42 GTPase activity","type":"narrow"},{"name":"activation of Rab GTPase activity","type":"narrow"},{"name":"activation of Rac GTPase activity","type":"narrow"},{"name":"activation of Ral GTPase activity","type":"narrow"},{"name":"activation of Ran GTPase activity","type":"narrow"},{"name":"activation of Rap GTPase activity","type":"narrow"},{"name":"activation of Ras GTPase activity","type":"narrow"},{"name":"activation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0090630"}


id: GO:0071914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular membrane-bounded vesicle that contains prominin proteins (in mouse Prom1/CD33 or Prom2) and are found in body fluids including ventricular fluid, saliva, urine and seminal fluid. In the ventricular fluid of the developing mouse brain two major classes of these particles have been observed (P2 particles of 500-1000 nm and P4 particles of 50-80 nm) which likely originate from microvilli, primary cilia and/or the midbody of neuroepithelial cells. The physiological role is not known.","definition_xrefs":["PMID:15976444","PMID:17283184","GOC:vesicles","PMID:17109118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"prominosome","synonyms":[{"name":"prominin-containing extracellular membrane vesicle","type":"exact"}],"termid":"GO:0071914"}


id: PBO:0074270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 12","termid":"PBO:0074270"}


id: PBO:0059158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase domain containing 2","termid":"PBO:0059158"}


id: PR:P56288
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02228","PANTHER:PTHR22572:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.09","secondary_identifiers":["UniProtKB:P56288"],"synonyms":[{"name":"Spom972h-EIF2B3","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56288"}


id: PBO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein, conserved in yeast and apicomplexa","termid":"PBO:0090362"}


id: PBO:0058107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4322","termid":"PBO:0058107"}


id: GO:0098599
data:
  {"annotated_genes":["SJAG_00774","SJAG_03377","SJAG_00734","SJAG_02268","SJAG_02056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70479,89159,106207,96442,104349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008474"}]},"cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoyl moiety from some substrate.","definition_xrefs":["GOC:dos","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00734":null,"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"palmitoyl hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-5690046","Reactome:R-HSA-9027670"],"termid":"GO:0098599","terms_by_termid":{"GO:0008474":null}}


id: PBO:0017551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Tax4(predicted)","termid":"PBO:0017551"}


id: PBO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 2","termid":"PBO:0003109"}


id: GO:0018246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and coenzyme A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-coenzyme A linkage","termid":"GO:0018246"}


id: GO:0031350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid membrane (obsolete GO:0031350)","synonyms":[{"name":"intrinsic to plastid membrane","type":"narrow"}],"termid":"GO:0031350"}


id: PBO:0051847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRX2 divergent transcript","termid":"PBO:0051847"}


id: GO:0044841
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane of a gut granule, a lysosome-related organelle contained within the intestinal cells of the nematode C. elegans.","definition_xrefs":["PMID:22916203","PMID:24204312","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"gut granule","termid":"GO:0044840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"gut granule membrane","termid":"GO:0044841"}


id: PBO:0054507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1907","termid":"PBO:0054507"}


id: PBO:0074084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 1","termid":"PBO:0074084"}


id: PBO:0085900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in mitochondrial DNA maintenance; required for slowed DNA synthesis-induced filamentous growth","termid":"PBO:0085900"}


id: GO:0097493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell, providing elasticity and recoiling.","definition_xrefs":["GOC:BHF","PMID:23283722","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}


id: GO:0050147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribosyl-base1 + base2 = D-ribosyl-base2 + base1.","definition_xrefs":["EC:2.4.2.5","MetaCyc:NUCLEOSIDE-RIBOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"nucleoside ribosyltransferase activity","synonyms":[{"name":"nucleoside N-ribosyltransferase activity","type":"related"},{"name":"nucleoside:purine(pyrimidine) D-ribosyltransferase activity","type":"related"}],"termid":"GO:0050147"}


id: GO:0120001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A scallop-shaped plaque, also referred to as an asymmetric unit membrane (AUM), found in the apical plasma membrane of urothelial superficial (umbrella) cells which form a a barrier to the passage of water and soluble toxic compounds found in urine. The plaques are thickened regions of membrane composed of uroplakin transmembrane proteins which form a crystalline array.","definition_xrefs":["PMID:21468280","PMID:21887288","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"apical plasma membrane urothelial plaque","synonyms":[{"name":"AUM","type":"related"},{"name":"asymmetric unit membrane","type":"exact"}],"termid":"GO:0120001"}


id: PBO:0080592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 19","termid":"PBO:0080592"}


id: GO:0034807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + C1 unit = hydroxymethoxybenzo(a)pyrene.","definition_xrefs":["UM-BBD_reactionID:r1131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"4,5-dihydroxybenzo(a)pyrene methyltransferase activity","termid":"GO:0034807"}


id: PBO:0052888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-11, pseudogene","termid":"PBO:0052888"}


id: PBO:0058493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5688","termid":"PBO:0058493"}


id: GO:0034297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which oidia, a type of asexual spore found in fungi, are formed. Oidia are borne a few at a time on very simple hyphae that protrude a short distance into the substrate, and are usually presumed not to constitute the main reproductive strategy of the fungus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oidium formation","termid":"GO:0034297"}


id: PBO:0049291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 10, pseudogene","termid":"PBO:0049291"}


id: PBO:0087549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA globular domain of TFIIIC that binds DNA at the BoxA promoter sites of tRNA and similar genes; human homolog is TFIIIC-63","termid":"PBO:0087549"}


id: PBO:0068035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 340","termid":"PBO:0068035"}


id: PBO:0069250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 505, pseudogene","termid":"PBO:0069250"}


id: PBO:0049353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 11","termid":"PBO:0049353"}


id: PR:Q96VG0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.19 gene.","definition_xrefs":["UniProtKB:Q96VG0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.19","synonyms":[{"name":"Spom972h-SPBC16G5.19","type":"exact"}],"termid":"PR:Q96VG0"}


id: FYPO:0005955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the entire mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle","synonyms":[{"name":"increased duration of mitotic cell cycle during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005955"}


id: GO:0102822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-7-olate + S-adenosyl-L-methionine = H+ + isorhamnetin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.42","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"quercetin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8262","RHEA:55332"],"termid":"GO:0102822"}


id: PBO:0071123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 125","termid":"PBO:0071123"}


id: GO:1904254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GO_REF:0000059","GOC:kom","PMID:15514116","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of iron ion transmembrane transporter activity","synonyms":[{"name":"regulation of iron cation channel activity","type":"exact"},{"name":"regulation of iron channel activity","type":"exact"},{"name":"regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904254"}


id: GO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid.","definition_xrefs":["EC:3.5.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"aminoacylase activity","secondary_identifiers":["MetaCyc:AMINOACYLASE-RXN","Reactome:R-HSA-9753944","RHEA:15565","Reactome:R-HSA-9638046","Reactome:R-HSA-5433074","Reactome:R-HSA-5579081"],"synonyms":[{"name":"L-amino-acid acylase activity","type":"related"},{"name":"L-aminoacylase activity","type":"related"},{"name":"N-acyl-L-amino-acid amidohydrolase activity","type":"related"},{"name":"acylase I activity","type":"narrow"},{"name":"alpha-N-acylaminoacid hydrolase activity","type":"related"},{"name":"amido acid deacylase activity","type":"related"},{"name":"aminoacylase I activity","type":"narrow"},{"name":"benzamidase activity","type":"related"},{"name":"dehydropeptidase II activity","type":"narrow"},{"name":"hippurase activity","type":"related"},{"name":"histozyme activity","type":"related"},{"name":"long acyl amidoacylase activity","type":"related"},{"name":"short acyl amidoacylase activity","type":"related"}],"termid":"GO:0004046"}


id: FYPO:0000877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000877"}


id: GO:0048460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the flower. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower formation","secondary_identifiers":["GO:0048410"],"termid":"GO:0048460"}


id: GO:0042717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer associated with a plasma membrane-derived chromatophore; surrounds chromatophores that form complete vesicles.","definition_xrefs":["ISBN:0395825172","GOC:mah","PMID:11867431","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic membrane","termid":"GO:0034357"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived chromatophore membrane","termid":"GO:0042717"}


id: PBO:0063902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Y","termid":"PBO:0063902"}


id: PBO:0086116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for cytoplasm to vacuole targeting of proteins; forms a complex with Far3p and Far7p to Far11p involved in recovery from pheromone-induced cell cycle arrest; mutant has increased aneuploidy tolerance; VPS64 has a paralog, FAR10, that arose from the whole genome duplication","termid":"PBO:0086116"}


id: PBO:0085577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 2'-O-methylation of C32 of substrate tRNAs; interacts with 2'-O-ribose methyltransferase Trm7p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; non-essential gene; yeast null mutant can be functionally complemented by human THADA, mutations in which have been implicated in epithelial thyroid adenomas, type 2 diabetes, and polycystic ovary syndrome (PCOS)","termid":"PBO:0085577"}


id: GO:0007006
data:
  {"annotated_genes":["SJAG_00230","SJAG_01305","SJAG_02656","SJAG_02797","SJAG_01951","SJAG_02028","SJAG_00404","SJAG_01470","SJAG_01917","SJAG_02002","SJAG_03416","SJAG_00569","SJAG_01120","SJAG_04370","SJAG_00079","SJAG_06440","SJAG_05268","SJAG_04208","SJAG_02398","SJAG_01949","SJAG_03502","SJAG_02355","SJAG_05300","SJAG_05241","SJAG_04317","SJAG_01640","SJAG_02361","SJAG_00168","SJAG_01780","SJAG_03563","SJAG_00576","SJAG_04996","SJAG_02501","SJAG_04237","SJAG_03168","SJAG_03515","SJAG_02524","SJAG_02034","SJAG_03633","SJAG_04965","SJAG_04323","SJAG_03700","SJAG_00687","SJAG_05302","SJAG_03710","SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88678,92210,95258,96787,97692,99827,101255,101616,104850,108275,112972],"is_not":false,"summary":null,"term":"GO:0007006"},{"annotations":[74547,102700,105345,77444,97197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[75000,85700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007007"},{"annotations":[100317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[70267,105721],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070096"},{"annotations":[96026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007008"},{"annotations":[75019,73026,111456,84430,86116,102976,73748,102953,108450,98380,76850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[77211,84563,109917,108597,96418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[94133,103038,107074,105373,105722,102954,70262,93791,105712,102907,75767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrial membrane, either of the lipid bilayer surrounding a mitochondrion.","definition_xrefs":["GOC:dph","GOC:mah","GOC:ai","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00168":null,"SJAG_00230":null,"SJAG_00404":null,"SJAG_00569":null,"SJAG_00576":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01305":null,"SJAG_01405":null,"SJAG_01470":null,"SJAG_01640":null,"SJAG_01780":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02398":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_02797":null,"SJAG_03168":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03563":null,"SJAG_03633":null,"SJAG_03700":null,"SJAG_03710":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04317":null,"SJAG_04323":null,"SJAG_04370":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05268":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"mitochondrial membrane organisation","type":"exact"},{"name":"mitochondrial membrane organization and biogenesis","type":"related"}],"termid":"GO:0007006","terms_by_termid":{"GO:0007006":null,"GO:0007007":null,"GO:0007008":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:0045040":null,"GO:0070096":null,"GO:1990627":null}}


id: PBO:0091448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, meiosis specific","termid":"PBO:0091448"}


id: GO:0007054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the spindle during meiosis I of a meiotic cell cycle in males. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in male meiosis","termid":"GO:0007053"},{"relation_name":"part_of","term_name":"male meiosis I","termid":"GO:0007141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0000226","GO:0140013","GO:0008150","GO:0007010","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"spindle assembly involved in male meiosis I","synonyms":[{"name":"male meiosis I spindle assembly","type":"related"}],"termid":"GO:0007054"}


id: FYECO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caspofungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ caspofungin SLD","termid":"FYECO:0000393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ caspofungin LD","termid":"FYECO:0000394"}


id: GO:0002936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the peptide hormone bradykinin.","definition_xrefs":["PMID:11226291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bradykinin biosynthetic process","termid":"GO:0002936"}


id: MOD:00658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a methylated arginine, either 5-methylargine, N5-methylarginine, or an omega-N-methylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated arginine","synonyms":[{"name":"MeArg","type":"exact"}],"termid":"MOD:00658"}


id: GO:0106379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-(d)RTP + H20 = 8-oxo-(d)RMP + diphosphate + H+.","definition_xrefs":["PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0047429","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"8-oxo-(d)RTP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-9731228"],"termid":"GO:0106379"}


id: GO:0017199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal threonine of proteins to form the derivative N-acetyl-L-threonine; catalyzed by peptide alpha-N-acetyltransferase.","definition_xrefs":["RESID:AA0052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"},{"relation_name":"is_a","term_name":"peptidyl-threonine acetylation","termid":"GO:0120257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"N-terminal peptidyl-threonine acetylation","termid":"GO:0017199"}


id: PBO:0036294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex polyribonucleotide 5'-hydroxyl-kinase subunit (predicted)","termid":"PBO:0036294"}


id: PBO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyl transferase; catalyzes the cotranslational, covalent attachment of myristic acid to the N-terminal glycine residue of several proteins involved in cellular growth and signal transduction","termid":"PBO:0085029"}


id: GO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein tyrosine phosphatase signaling protein activity (obsolete GO:0005082)","synonyms":[{"name":"receptor signaling protein tyrosine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein tyrosine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005082"}


id: PBO:0083677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein involved in turnover of plasma membrane proteins; member of the DUP380 subfamily of conserved, often subtelomeric COS genes; required for the multivesicular vesicle body sorting pathway that internalizes plasma membrane proteins for degradation; Cos proteins provide ubiquitin in trans for nonubiquitinated cargo proteins; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0083677"}


id: PBO:0056888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake family member 3","termid":"PBO:0056888"}


id: GO:0009821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alkaloids, nitrogen-containing natural products which are not otherwise classified as nonprotein amino acids, amines, peptides, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones, or primary metabolite (such as purine or pyrimidine bases).","definition_xrefs":["GOC:lr","ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"alkaloid biosynthetic process","secondary_identifiers":["UM-BBD_enzymeID:e0711"],"synonyms":[{"name":"alkaloid anabolism","type":"exact"},{"name":"alkaloid biosynthesis","type":"exact"},{"name":"alkaloid formation","type":"exact"},{"name":"alkaloid synthesis","type":"exact"}],"termid":"GO:0009821"}


id: PBO:0016550
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cereviaiae YKR002W","termid":"PBO:0016550"}


id: FYPO:0005135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to linear element","synonyms":[{"name":"normal protein localisation to linear element","type":"exact"}],"termid":"FYPO:0005135"}


id: MOD:01496
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01496"}


id: PR:000050489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 15 (Schizosaccharomyces pombe) that has not been phosphorylated by pom1, at the positions equivalent to Ser-405, Thr-419, Thr-492, Ser-511, Ser-527, Ser-605, Ser-636, Ser-702, Ser-710, Ser-721, Ser-732, Ser-743, Ser-752, Ser-774, Ser-785, Ser-786, Ser-813, Ser-821, Ser-831, Ser-836, and Ser-840 of the amino acid sequence represented by UniProtKB:Q09822. Example: UniProtKB:Q09822, Ser-405/Thr-419/Thr-492/Ser-511/Ser-527/Ser-605/Ser-636/Ser-702/Ser-710/Ser-721/Ser-732/Ser-743/Ser-752/Ser-774/Ser-785/Ser-786/Ser-813/Ser-821/Ser-831/Ser-836/Ser-840, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:32101481","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 15 (Schizosaccharomyces pombe)","termid":"PR:000050488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc15/UnPhos","pombase_gene_id":"SPAC20G8.05c","synonyms":[{"name":"Spom-cdc15/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q09822, Ser-405/Thr-419/Thr-492/Ser-511/Ser-527/Ser-605/Ser-636/Ser-702/Ser-710/Ser-721/Ser-732/Ser-743/Ser-752/Ser-774/Ser-785/Ser-786/Ser-813/Ser-821/Ser-831/Ser-836/Ser-840, PR:000026291","type":"narrow"},{"name":"cdc15/UnPhos","type":"exact"},{"name":"cdc15/UnPhos:(S405,T419,T492,S511,S527,S605,S636,S702,S710,S721,S732,S743,S752,S774,S785,S786,S813,S821,S831,S836,S840)","type":"exact"}],"termid":"PR:000050489"}


id: GO:0072306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072041"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:0072304"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900213"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"positive regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"positive regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072306"}


id: GO:0061724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of lipid droplets by macroautophagy.","definition_xrefs":["PMID:23708524","PMID:26076903","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"lipophagy","termid":"GO:0061724"}


id: GO:0014020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the neural tube from an epithelial cell sheet (the neuroepithelium or neural plate). In primary neurulation, the cells surrounding the neural plate direct the neural plate cells to proliferate, invaginate, and pinch off from the surface to form a hollow epithelial tube. Primary neurulation is the typical mechanism of formation of the anterior neural tube.","definition_xrefs":["PMID:15327780","GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"neural tube formation","termid":"GO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary neural tube formation","secondary_identifiers":["GO:0014024"],"synonyms":[{"name":"neural rod cavitation","type":"related"},{"name":"primary neural tube morphogenesis","type":"exact"},{"name":"primary neurulation","type":"exact"}],"termid":"GO:0014020"}


id: FYPO:0007378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which rapid, back-and-forth movement of the mitotic spindle pole body (SPB), and associated chromosome movement, is normal (i.e. indistinguishable from wild type). SPB oscillation occurs during mitotic interphase (as well as prophase) and is restricted to a small space.","definition_xrefs":["PMID:18495844","GO:0140405","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"normal mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"normal mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"normal spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"normal spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007378"}


id: PBO:0090645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1","termid":"PBO:0090645"}


id: GO:0008616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of queuosines, a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside biosynthetic process","termid":"GO:0042455"},{"relation_name":"is_a","term_name":"queuosine metabolic process","termid":"GO:0046116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"queuosine biosynthetic process","synonyms":[{"name":"queuosine anabolism","type":"exact"},{"name":"queuosine biosynthesis","type":"exact"},{"name":"queuosine formation","type":"exact"},{"name":"queuosine synthesis","type":"exact"}],"termid":"GO:0008616"}


id: GO:0050081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + maltose 6'-phosphate = D-glucose + D-glucose 6-phosphate.","definition_xrefs":["MetaCyc:MALTOSE-6-PHOSPHATE-GLUCOSIDASE-RXN","EC:3.2.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"maltose-6'-phosphate glucosidase activity","secondary_identifiers":["RHEA:20421"],"synonyms":[{"name":"maltose-6'-phosphate 6-phosphoglucohydrolase activity","type":"related"},{"name":"phospho-alpha-glucosidase activity","type":"related"}],"termid":"GO:0050081"}


id: PBO:0079446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 3 pseudogene 1","termid":"PBO:0079446"}


id: PBO:0070369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 7","termid":"PBO:0070369"}


id: SO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which the SP6 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP6_RNA_Polymerase_Promoter","synonyms":[{"name":"SP6 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001205"}


id: RO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity and a condition (a phenotype or disease) of a host, in which the material entity is not part of the host, and is considered harmless to non-allergic hosts, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_allergic_trigger_for","termid":"RO:0001020"}


id: FYPO:0006114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during S phase of the mitotic cell cycle is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during mitotic S phase","synonyms":[{"name":"increased protein accumulation during mitotic S phase","type":"related"},{"name":"increased protein level during S phase of mitotic cell cycle","type":"related"},{"name":"increased protein level during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006114"}


id: PBO:0030071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_valine_import","termid":"PBO:0030071"}


id: GO:0033763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + 2-oxoglutarate + O2 = cis-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["EC:1.14.11.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"proline 3-hydroxylase activity","secondary_identifiers":["RHEA:20265","MetaCyc:1.14.11.28-RXN"],"synonyms":[{"name":"L-proline,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"P-3-H","type":"related"}],"termid":"GO:0033763"}


id: PBO:0027384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_chromatin_bridge","termid":"PBO:0027384"}


id: GO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sour taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sour taste","synonyms":[{"name":"sour taste perception","type":"exact"}],"termid":"GO:0050915"}


id: GO:0047540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoate + NAD+ = 2-butenoate + NADH + H+.","definition_xrefs":["MetaCyc:2-ENOATE-REDUCTASE-RXN","EC:1.3.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-enoate reductase activity","secondary_identifiers":["RHEA:10200"],"synonyms":[{"name":"butanoate:NAD+ delta2-oxidoreductase activity","type":"related"},{"name":"enoate reductase activity","type":"related"}],"termid":"GO:0047540"}


id: PBO:0073365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family H member 1 pseudogene 1","termid":"PBO:0073365"}


id: RO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a branching part of y if and only if x is part of y and x is connected directly or indirectly to the main stem of y","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branching_part_of","termid":"RO:0002380"}


id: PBO:0063044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PALLD antisense RNA 1","termid":"PBO:0063044"}


id: GO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of leaflet formation as a result of the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"},{"relation_name":"is_a","term_name":"regulation of leaflet formation","termid":"GO:0090016"},{"relation_name":"is_a","term_name":"positive regulation of leaf development","termid":"GO:1905623"},{"relation_name":"positively_regulates","term_name":"leaflet formation","termid":"GO:0090014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of leaflet formation by auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of leaflet formation by auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0090015"}


id: PR:G2TRM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.18c","synonyms":[{"name":"Spom972h-tam5","type":"exact"},{"name":"transcripts altered in meiosis protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRM7"}


id: PR:Q1MTR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.06c gene.","definition_xrefs":["UniProtKB:Q1MTR5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger membrane protein C15C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.06c","synonyms":[{"name":"Spom972h-SPBC15C4.06c","type":"exact"}],"termid":"PR:Q1MTR5"}


id: MOD:01929
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an either an L-asparagine residue or an L-aspartic acid residue with an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoaspartyl)-L-lysine.","definition_xrefs":["ChEBI:21862","RESID:AA0294","PubMed:11000116","PubMed:6503713","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(L-isoaspartyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(3S)-3-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl lysine isopeptide (Lys-Asn)","type":"exact"},{"name":"N(epsilon)-(beta-aspartyl)lysine","type":"exact"},{"name":"N-(beta-Aspartyl)-Lysine (Crosslink)","type":"exact"},{"name":"N6-(L-isoaspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys","type":"exact"},{"name":"beta-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"isoaspartyl N6-lysine","type":"exact"}],"termid":"MOD:01929"}


id: PBO:0090675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsf1","termid":"PBO:0090675"}


id: PBO:0047978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member E, pseudogene","termid":"PBO:0047978"}


id: PBO:0029954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_binding","termid":"PBO:0029954"}


id: PBO:0069336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 596, pseudogene","termid":"PBO:0069336"}


id: GO:0102713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A25 + 2-oxoglutarate(2-) + O2 = gibberellin A46 + succinate(2-) + carbon dioxide.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gibberellin A25 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-6543"],"termid":"GO:0102713"}


id: GO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + H2O = deoxyinosine + NH3.","definition_xrefs":["GOC:ai","RHEA:28190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"2'-deoxyadenosine deaminase activity","secondary_identifiers":["MetaCyc:ADDALT-RXN","EC:3.5.4.4"],"synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0046936"}


id: GO:0050957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an orientational stimulus, convert it to a molecular signal, and recognize and characterize the signal. Equilibrioception refers to a combination of processes by which an organism can perceive its orientation with respect to gravity. In animals, stimuli come from labyrinth system of the inner ears, monitoring the direction of motion; visual stimuli, with information on orientation and motion; pressure receptors, which tell the organism which body surfaces are in contact with the ground; and proprioceptive cues, which report which parts of the body are in motion.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"},{"relation_name":"part_of","term_name":"neuromuscular process controlling balance","termid":"GO:0050885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"equilibrioception","secondary_identifiers":["Wikipedia:Equilibrioception"],"synonyms":[{"name":"sensory perception of orientation with respect to gravity","type":"exact"}],"termid":"GO:0050957"}


id: PBO:0043370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog","termid":"PBO:0043370"}


id: PR:O13692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas5 gene.","definition_xrefs":["UniProtKB:O13692","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.13c","synonyms":[{"name":"Spom972h-gas5","type":"exact"}],"termid":"PR:O13692"}


id: GO:0030466
data:
  {"annotated_genes":["SJAG_01579","SJAG_03042","SJAG_02778","SJAG_02409","SJAG_01540","SJAG_02119","SJAG_03255","SJAG_01601","SJAG_00160","SJAG_03844","SJAG_00756","SJAG_04574","SJAG_00934"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71589,91123,92318,94675,99549,103528,105799,107387,107485,108918,112828,113897],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[76355],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061186"}]},"cv_name":"biological_process","definition":"Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00160":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03255":null,"SJAG_03844":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"silent mating-type cassette heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0006347","GO:0035389"],"synonyms":[{"name":"aging-dependent sterility","type":"narrow"},{"name":"chromatin silencing at HML and HMR","type":"narrow"},{"name":"chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"establishment of chromatin silencing at silent mating-type cassette","type":"related"},{"name":"heterochromatic silencing at silent mating-type cassette","type":"exact"},{"name":"silent mating-type cassette chromatin silencing","type":"exact"},{"name":"silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0030466","terms_by_termid":{"GO:0030466":null,"GO:0061186":null}}


id: GO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a T-helper 1 cell in response to an external stimulus.","definition_xrefs":["CL:0000545","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell chemotaxis","synonyms":[{"name":"Th1 cell chemotaxis","type":"exact"}],"termid":"GO:0035706"}


id: FYPO:0004105
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114315],"is_not":false,"summary":null,"term":"FYPO:0004105"}],"single_locus_phenotype":[{"annotations":[114299],"is_not":false,"summary":null,"term":"FYPO:0004105"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which polar cell growth does not occur. Cells grow without polarization, instead of growing only at the ends.","definition_xrefs":["PomBase:mah","PMID:8187760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"name":"abolished polar cell growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"synonyms":[{"name":"abolished polar vegetative cell growth","type":"exact"},{"name":"abolished polarized cell growth","type":"exact"},{"name":"abolished unidimensional cell growth","type":"exact"},{"name":"depolarized cell growth","type":"exact"}],"termid":"FYPO:0004105","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004105":null,"FYPO_EXT:0000001":null}}


id: GO:0052479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052479)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"},{"name":"suppression by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052479"}


id: GO:0000288
data:
  {"annotated_genes":["SJAG_02808","SJAG_02213","SJAG_03883","SJAG_04321","SJAG_04824","SJAG_02239","SJAG_05010","SJAG_02540","SJAG_03157","SJAG_00343","SJAG_00391","SJAG_00686","SJAG_02383","SJAG_01521","SJAG_03597","SJAG_01836","SJAG_01910","SJAG_05322","SJAG_04818","SJAG_04880","SJAG_01625","SJAG_00759","SJAG_04407","SJAG_04350","SJAG_01053","SJAG_16457","SJAG_00966","SJAG_02036","SJAG_00285","SJAG_05694","SJAG_04084","SJAG_03113","SJAG_01944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70861,75751,78087,93621,93702,95437,110358],"is_not":false,"summary":null,"term":"GO:0000288"},{"annotations":[107282,76605,105215,75047,73952,78348],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[71802,74511,76528,71511,73831,72368],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043928"},{"annotations":[86487,85521,88238,77715,98483,110841,91112,104546,88144,72439,71379,87601,112315,89962,87655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"}]},"cv_name":"biological_process","definition":"A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps that includes poly(A) tail shortening and that can regulate mRNA stability.","definition_xrefs":["GOC:krc","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01836":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03597":null,"SJAG_03883":null,"SJAG_04084":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"deadenylation-dependent mRNA decay","type":"exact"},{"name":"mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:0000288","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0043928":null}}


id: GO:0009932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth that occurs specifically at the tip of a cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell tip growth","termid":"GO:0009932"}


id: MOD:01826
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-129 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex-129 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01826"}


id: FYPO:0006653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of flap-structured DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal flap-structured DNA binding","termid":"FYPO:0006653"}


id: FYPO:0004405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to JM335. Cells stop growing (and may die) at a concentration of JM335 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to JM335","synonyms":[{"name":"hypersensitive to JM335","type":"exact"},{"name":"sensitive to JM335 during mitotic cell cycle","type":"related"},{"name":"sensitive to JM335 during vegetative growth","type":"exact"}],"termid":"FYPO:0004405"}


id: PBO:0057747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1827","termid":"PBO:0057747"}


id: FYPO:0006833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis  begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah","GO:0031671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal onset of primary cell septum biogenesis","synonyms":[{"name":"normal onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"normal onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"normal onset of primary cell septum formation","type":"exact"},{"name":"normal onset of primary septum biogenesis","type":"exact"},{"name":"normal onset of primary septum synthesis","type":"related"},{"name":"normal timing of primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006833"}


id: PBO:0073671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein alpha pseudogene 1","termid":"PBO:0073671"}


id: PBO:0084435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; transcription factor; part of the complex locus MAL6, plays a positive role in the regulation of maltose fermentation","termid":"PBO:0084435"}


id: PR:O42889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8E4.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.05c","synonyms":[{"name":"Spom972h-SPBC8E4.05c","type":"exact"}],"termid":"PR:O42889"}


id: PBO:0047383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 17","termid":"PBO:0047383"}


id: SO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-covalent primer binding site for initiation of replication, transcription, or reverse transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_binding_site","termid":"SO:0001655"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer_binding_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Primer_binding_site"],"synonyms":[{"name":"INSDC_feature:primer_bind","type":"exact"},{"name":"primer binding site","type":"exact"}],"termid":"SO:0005850"}


id: GO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"positively_regulates","term_name":"specification of animal organ identity","termid":"GO:0010092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ induction","synonyms":[{"name":"induction of an organ","type":"exact"}],"termid":"GO:0001759"}


id: PBO:0048145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 1","termid":"PBO:0048145"}


id: GO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a dense granule of the type found in apicomplexan parasites.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"merozoite dense granule","termid":"GO:0020026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"merozoite dense granule membrane","termid":"GO:0030668"}


id: PBO:0091688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Itsy-Bitsy Phosphatase","termid":"PBO:0091688"}


id: PBO:0083786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant","termid":"PBO:0083786"}


id: PBO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl5","termid":"PBO:0036492"}


id: GO:0004633
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85131],"is_not":false,"summary":null,"term":"GO:0004633"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-[(R)-4-phosphonatopantothenoyl]-L-cysteinate + H+ = CO2 + pantetheine 4'-phosphate.","definition_xrefs":["EC:4.1.1.36","RHEA:16793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03269","Reactome:R-HSA-196840","MetaCyc:P-PANTOCYSDECARB-RXN"],"synonyms":[{"name":"4-phosphopantothenoyl-L-cysteine decarboxylase activity","type":"related"},{"name":"4-phosphopantotheoylcysteine decarboxylase activity","type":"related"},{"name":"N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase activity","type":"related"},{"name":"N-[(R)-4'-phosphopantothenoyl]-L-cysteine carboxy-lyase (pantotheine-4'-phosphate-forming)","type":"related"},{"name":"N-[(R)-4'-phosphopantothenoyl]-L-cysteine carboxy-lyase activity","type":"related"},{"name":"PPC-decarboxylase activity","type":"related"}],"termid":"GO:0004633","terms_by_termid":{"GO:0004633":null}}


id: PBO:0059539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site Y","termid":"PBO:0059539"}


id: GO:1990813
data:
  {"annotated_genes":["SJAG_04126","SJAG_00600","SJAG_01805","SJAG_04259","SJAG_03926","SJAG_00229","SJAG_01082","SJAG_03989","SJAG_03681","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89438,94671,96778,97285,99941,103202,108481,109032,109731,111089],"is_not":false,"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome centromeric region is maintained during homologous chromosome segregation at meiotic anaphase I  after cohesin is cleaved by separase along the arm regions.","definition_xrefs":["PMID:14730319","PMID:25533956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic centromeric cohesion protection in anaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"anaphase cohesion protection","type":"exact"},{"name":"protection of centromeric cohesion during meiotic anaphase I","type":"exact"}],"termid":"GO:1990813","terms_by_termid":{"GO:1990813":null}}


