# terms

id: GO:0033746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 2 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579","PMID:29233856","PMID:22483719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016491","GO:0003824","GO:0032452"],"is_obsolete":false,"name":"histone H3R2 demethylase activity","synonyms":[{"name":"histone H3-R2 demethylase activity","type":"exact"},{"name":"histone H3-methyl-arginine-2 demethylase activity","type":"exact"},{"name":"histone H3R2me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-R2 specific)","type":"exact"}],"termid":"GO:0033746"}


id: GO:2001220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G2 phase of mitotic cell cycle (obsolete GO:2001220)","synonyms":[{"name":"negative regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2001220"}


id: GO:0043292
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["ISBN:0815316194","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"contractile fiber","synonyms":[{"name":"contractile fibre","type":"exact"}],"termid":"GO:0043292"}


id: PBO:0091376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 2","termid":"PBO:0091376"}


id: PR:Q9UUA1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.01c gene.","definition_xrefs":["UniProtKB:Q9UUA1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C23B6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.01c","synonyms":[{"name":"Spom972h-SPCC23B6.01c","type":"exact"}],"termid":"PR:Q9UUA1"}


id: PBO:0029708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_low_pH","termid":"PBO:0029708"}


id: GO:0010141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which guanine, xanthine and their nucleoside from purine nucleotides breakdown are converted back to purine nucleotides. The pathway is important in cells where there is no de-novo purine nucleotides biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine, xanthine and their nucleoside salvage (obsolete GO:0010141)","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010141"}


id: PBO:0085176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase; catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynthesis; component of a mitochondrial ubiquinone-synthesizing complex; phosphoprotein","termid":"PBO:0085176"}


id: PBO:0068358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 139","termid":"PBO:0068358"}


id: PBO:0027191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_protein_degradation","termid":"PBO:0027191"}


id: GO:0062003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062002"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062003"}


id: PBO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1AR divergent transcript","termid":"PBO:0039643"}


id: PBO:0077203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM4SF19 antisense RNA 1","termid":"PBO:0077203"}


id: PBO:0039547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 44","termid":"PBO:0039547"}


id: PBO:0041510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 132","termid":"PBO:0041510"}


id: PBO:0067831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 133","termid":"PBO:0067831"}


id: PBO:0089047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane associated esterase/lipase","termid":"PBO:0089047"}


id: PBO:0012065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein (predicted)","termid":"PBO:0012065"}


id: GO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"negatively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV hypersensitivity","synonyms":[{"name":"down regulation of type IV hypersensitivity","type":"exact"},{"name":"down-regulation of type IV hypersensitivity","type":"exact"},{"name":"downregulation of type IV hypersensitivity","type":"exact"},{"name":"inhibition of type IV hypersensitivity","type":"narrow"}],"termid":"GO:0001808"}


id: GO:0103044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + a [protein] C-terminal L-glutamate = ADP + hydrogenphosphate + H+ + a [protein] with C-terminal alpha-L-glutamate-alpha-L-glutamate.","definition_xrefs":["EC:6.3.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal S6-glutamic acid ligase activity","termid":"GO:0018169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016874"],"is_obsolete":false,"name":"ribosomal protein S6 glutamate-glutamate ligase activity","secondary_identifiers":["MetaCyc:RXN0-6726"],"termid":"GO:0103044"}


id: PBO:0053861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1134","termid":"PBO:0053861"}


id: GO:1902620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule minus-end binding.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:22939623","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule minus-end binding","termid":"GO:1902619"},{"relation_name":"is_a","term_name":"positive regulation of microtubule binding","termid":"GO:1904528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule minus-end binding","synonyms":[{"name":"activation of microtubule minus-end binding","type":"narrow"},{"name":"up regulation of microtubule minus-end binding","type":"exact"},{"name":"up-regulation of microtubule minus-end binding","type":"exact"},{"name":"upregulation of microtubule minus-end binding","type":"exact"}],"termid":"GO:1902620"}


id: GO:1904974
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of heparanase activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","GO_REF:0000088","PMID:12927802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"heparanase complex","synonyms":[{"name":"HEPS complex","type":"exact"}],"termid":"GO:1904974"}


id: CHEBI:609827
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-canavanine","termid":"CHEBI:609827"}


id: PBO:0063977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 11","termid":"PBO:0063977"}


id: PBO:0004007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer epsilon subunit (predicted)","termid":"PBO:0004007"}


id: PBO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO pseudogene 1","termid":"PBO:0048102"}


id: PBO:0048685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 4","termid":"PBO:0048685"}


id: PBO:0079579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C","termid":"PBO:0079579"}


id: PBO:0088037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin conjugating enzyme; involved in the ER-associated protein degradation (ERAD) pathway and in the inner nuclear membrane-associated degradation (INMAD) pathway; requires Cue1p for recruitment to the ER membrane; proposed to be involved in chromatin assembly","termid":"PBO:0088037"}


id: PR:Q10096
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C11D3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.17","synonyms":[{"name":"Spom972h-SPAC11D3.17","type":"exact"}],"termid":"PR:Q10096"}


id: GO:0050105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + O2 = L-xylo-hex-3-ulonolactone + H2O2.","definition_xrefs":["EC:1.1.3.8","RHEA:32363","MetaCyc:L-GULONOLACTONE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-gulonolactone oxidase activity","synonyms":[{"name":"GLO activity","type":"related"},{"name":"L-gulono-1,4-lactone:oxygen 3-oxidoreductase activity","type":"related"},{"name":"L-gulono-gamma-lactone oxidase activity","type":"related"},{"name":"L-gulono-gamma-lactone:O2 oxidoreductase activity","type":"related"},{"name":"L-gulono-gamma-lactone:oxidoreductase activity","type":"related"}],"termid":"GO:0050105"}


id: PBO:0028020
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0028020"}


id: PBO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric duplication","termid":"PBO:0000066"}


id: FYPO:0000501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitophagy is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitophagy","termid":"FYPO:0007590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased mitophagy","synonyms":[{"name":"increased autophagy of mitochondrion","type":"exact"},{"name":"mitophagy: increased","type":"related"}],"termid":"FYPO:0000501"}


id: PBO:0085699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in retrograde transport to the cis-Golgi network; forms heterodimer with Rgp1p that acts as a GTP exchange factor for Ypt6p; involved in transcription of rRNA and ribosomal protein genes","termid":"PBO:0085699"}


id: PBO:0075239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 10","termid":"PBO:0075239"}


id: GO:0048228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that establishes the spatial arrangement of actin cortical patches. An actin cortical patch is a discrete actin-containing structure found at the plasma membrane in fungal cells.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cortical patch distribution (obsolete GO:0048228)","synonyms":[{"name":"actin cortical patch distribution","type":"exact"}],"termid":"GO:0048228"}


id: PBO:0058792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7161","termid":"PBO:0058792"}


id: GO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kojibiose + phosphate = beta-D-glucose 1-phosphate + D-glucose.","definition_xrefs":["RHEA:11176","EC:2.4.1.230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"kojibiose phosphorylase activity","secondary_identifiers":["KEGG_REACTION:R07264","MetaCyc:2.4.1.230-RXN"],"synonyms":[{"name":"2-alpha-D-glucosyl-D-glucose:phosphate beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033831"}


id: PBO:0031510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_in_response_to_nitrogen_starvation","termid":"PBO:0031510"}


id: GO:0006678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucosylceramide metabolic process","synonyms":[{"name":"glucosylceramide metabolism","type":"exact"}],"termid":"GO:0006678"}


id: PBO:0049938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 2","termid":"PBO:0049938"}


id: GO:0032057
data:
  {"annotated_genes":["SJAG_00169","SJAG_02592","SJAG_03869","SJAG_00690","SJAG_01942","SJAG_00786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88462,72416,70258,89993,110797,94867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"part_of","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"down regulation of translation initiation in response to stress","type":"exact"},{"name":"down-regulation of translation initiation in response to stress","type":"exact"},{"name":"downregulation of translation initiation in response to stress","type":"exact"},{"name":"inhibition of translation initiation in response to stress","type":"narrow"}],"termid":"GO:0032057","terms_by_termid":{"GO:1990625":null}}


id: PBO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase (predicted)","termid":"PBO:0000308"}


id: PBO:0040182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly factor for spindle microtubules","termid":"PBO:0040182"}


id: GO:0060405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of penile erection. Penile erection is the hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"penile erection","termid":"GO:0043084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of penile erection","termid":"GO:0060405"}


id: PR:Q9UUE3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUE3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine N-acyltransferase C17G9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.06c","synonyms":[{"name":"Spom972h-SPBC17G9.06c","type":"exact"}],"termid":"PR:Q9UUE3"}


id: GO:0072495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class of nuclear body in the eukaryotic host cell, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA. The host is the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell nucleoplasm","termid":"GO:0044095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Cajal body","synonyms":[{"name":"coiled body of host","type":"exact"},{"name":"host cell coiled body","type":"exact"}],"termid":"GO:0072495"}


id: GO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052491)","synonyms":[{"name":"negative regulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"negative regulation of symbiont SA-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"suppression of symbiont SA mediated defense response","type":"exact"}],"termid":"GO:0052491"}


id: GO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a feruloyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"spermidine:feruloyl CoA N-acyltransferase activity","termid":"GO:0080075"}


id: GO:0009785
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66553],"is_not":false,"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated upon sensing of blue light by photoreceptor molecule, at a wavelength between 400nm and 470nm.","definition_xrefs":["GOC:sm","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"},{"relation_name":"is_a","term_name":"cellular response to blue light","termid":"GO:0071483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"blue light signaling pathway","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"blue light signalling pathway","type":"exact"}],"termid":"GO:0009785","terms_by_termid":{"GO:0009785":null}}


id: GO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of replacing receptors on B cells, in which RAG gene expression allows continued light-chain gene rearrangement and expression of a new light change which combines with the previous heavy chain to form a new receptor.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"B cell receptor editing","synonyms":[{"name":"B lymphocyte receptor editing","type":"exact"},{"name":"B-cell receptor editing","type":"exact"},{"name":"B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002452"}


id: PR:Q9HGQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC212.01c/SPBCPT2R1.04c.","definition_xrefs":["UniProtKB:Q9HGQ1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein C212.01c/CPT2R1.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.04c","synonyms":[{"name":"Spom972h-SPBCPT2R1.04c","type":"exact"}],"termid":"PR:Q9HGQ1"}


id: PBO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 7","termid":"PBO:0051899"}


id: GO:0043120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"tumor necrosis factor binding","termid":"GO:0043120"}


id: GO:0030792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + methylarsonite = S-adenosyl-L-homocysteine + dimethylarsinate.","definition_xrefs":["EC:2.1.1.138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"methylarsonite methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.138-RXN"],"termid":"GO:0030792"}


id: GO:0016725
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885","SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102647,88086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[71893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[71890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:1.17.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, other acceptors","type":"narrow"}],"termid":"GO:0016725","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null}}


id: GO:0034689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaX subunit and one beta2 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alphaX-beta2 complex","synonyms":[{"name":"Itgax-Itgb2 complex","type":"narrow"},{"name":"alphaX-beta2 integrin complex","type":"exact"}],"termid":"GO:0034689"}


id: PBO:0040978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein like","termid":"PBO:0040978"}


id: PBO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase (predicted)","termid":"PBO:0000128"}


id: GO:1901753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene A4.","definition_xrefs":["PMID:23242647","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"leukotriene A4 biosynthetic process","synonyms":[{"name":"LTA4 biosynthesis","type":"exact"},{"name":"eoxin A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 anabolism","type":"exact"},{"name":"leukotriene A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 formation","type":"exact"},{"name":"leukotriene A4 synthesis","type":"exact"}],"termid":"GO:1901753"}


id: FYPO:0004183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing papuamide B when cells in the population are undergoing conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on papuamide B during mating","synonyms":[{"name":"normal cell population growth in presence of papuamide B during mating","type":"exact"},{"name":"normal cell population growth on papuamide B during mating","type":"exact"},{"name":"normal cellular response to papuamide B during mating","type":"related"},{"name":"normal growth on papuamide B during conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004183"}


id: PBO:0091404
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"New Inducer of Mitosis","termid":"PBO:0091404"}


id: GO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"}


id: FYPO:0006264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation is decreased at the telomeric regions during anaphase B. The remainder of the sister chromatids may or may not separate normally.","definition_xrefs":["PomBase:mah","PMID:21540296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomeric DNA separation","termid":"FYPO:0005442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased telomeric DNA separation during anaphase B","synonyms":[{"name":"decreased DNA separation at telomere during anaphase B","type":"exact"},{"name":"decreased mitotic sister chromatid separation at telomere during anaphase B","type":"exact"},{"name":"decreased mitotic telomeric DNA separation during anaphase B","type":"exact"},{"name":"decreased segregation of telomeric DNA during anaphase B","type":"related"},{"name":"decreased telomere disjunction during anaphase B","type":"exact"},{"name":"decreased telomere separation during anaphase B","type":"exact"},{"name":"decreased telomeric DNA separation during anaphase B during mitotic cell cycle","type":"related"},{"name":"decreased telomeric DNA separation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased telomeric DNA separation during anaphase B of mitosis","type":"exact"},{"name":"increased sister chromatid telomere nondisjunction at anaphase B","type":"exact"},{"name":"increased taz1 foci at anaphase B","type":"related"},{"name":"reduced telomeric DNA separation during anaphase B","type":"related"}],"termid":"FYPO:0006264"}


id: PBO:0066895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 195","termid":"PBO:0066895"}


id: PBO:0064513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit K","termid":"PBO:0064513"}


id: PBO:0058040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4261","termid":"PBO:0058040"}


id: PBO:0054503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1903","termid":"PBO:0054503"}


id: PBO:0084802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; conserved among S. cerevisiae strains; extensively overlaps a Ty1 LTR; YER181C is not an essential gene","termid":"PBO:0084802"}


id: PR:000027621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 ubiquitinated form in Schizosaccharomyces pombe. Ubiquitinated by SCF(Pof1). Example: UniProtKB:Q10424-1, MOD:01148.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 ubiquitinated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UbiqLys+","type":"exact"}],"termid":"PR:000027621"}


id: GO:0006631
data:
  {"annotated_genes":["SJAG_00734","SJAG_00413","SJAG_02885","SJAG_00902","SJAG_01238","SJAG_04972","SJAG_04107","SJAG_02007","SJAG_01396","SJAG_03972","SJAG_03198","SJAG_03526","SJAG_02769","SJAG_01946","SJAG_01300","SJAG_02717","SJAG_01356","SJAG_00947","SJAG_03943","SJAG_03130","SJAG_03313","SJAG_00305","SJAG_00102","SJAG_00099","SJAG_03553","SJAG_03180","SJAG_00221","SJAG_00706","SJAG_00630","SJAG_02788","SJAG_03471","SJAG_01458","SJAG_04913","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72268,76051,76745,89157,97144,104062],"is_not":false,"summary":null,"term":"GO:0006631"},{"annotations":[73024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[97527,90615,70411,87112,93821,92892,76375,76112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[106605,78350,73316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[87609,76740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[76738,87610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[87850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019395"},{"annotations":[92749,74566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[72157,99767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[76308,77646,103723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[71069],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[93253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[70466,74625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[72494,73317,76741,98916,87613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00102":null,"SJAG_00221":null,"SJAG_00305":null,"SJAG_00413":null,"SJAG_00630":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02769":null,"SJAG_02788":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04913":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Fatty_acid_metabolism"],"synonyms":[{"name":"fatty acid metabolism","type":"exact"}],"termid":"GO:0006631","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006631":null,"GO:0006633":null,"GO:0006635":null,"GO:0006636":null,"GO:0009107":null,"GO:0019367":null,"GO:0019395":null,"GO:0030497":null,"GO:0034625":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: PR:O94316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 116 kDa U5 small nuclear ribonucleoprotein component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03969","PANTHER:PTHR23115:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.12","secondary_identifiers":["UniProtKB:O94316"],"synonyms":[{"name":"114 kDa U5 small nuclear ribonucleoprotein component homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD2","type":"exact"},{"name":"complexed with cdc5 protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94316"}


id: GO:0051127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin nucleation","synonyms":[{"name":"activation of actin nucleation","type":"narrow"},{"name":"stimulation of actin nucleation","type":"narrow"},{"name":"up regulation of actin nucleation","type":"exact"},{"name":"up-regulation of actin nucleation","type":"exact"},{"name":"upregulation of actin nucleation","type":"exact"}],"termid":"GO:0051127"}


id: GO:0009516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"leucoplast","secondary_identifiers":["Wikipedia:Leucoplast"],"termid":"GO:0009516"}


id: PATO:0001406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having two nuclei.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"PATO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binucleate","termid":"PATO:0001406"}


id: GO:0052393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by host of symbiont defense response (obsolete GO:0052393)","synonyms":[{"name":"activation of symbiont defense response","type":"exact"}],"termid":"GO:0052393"}


id: GO:0061193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the taste bud over time, from its formation to the mature state. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"tongue development","termid":"GO:0043586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud development","termid":"GO:0061193"}


id: PBO:0042340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD74 molecule","termid":"PBO:0042340"}


id: GO:0042785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating host cytokine networks, e.g. by secreting proteins that mimic cytokine receptors that act to sequester host cytokines and inhibit action. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:9600978","PMID:10620615","PMID:9275219"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion of host immune response via modulation of host cytokine network (obsolete GO:0042785)","synonyms":[{"name":"active evasion of host immune response via regulation of host cytokine network","type":"related"},{"name":"active evasion of immune response of other organism via regulation of cytokine network of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of host cytokine network","type":"exact"},{"name":"active immune evasion via regulation of host cytokine network","type":"exact"},{"name":"evasion of host immune response via regulation of host cytokine network","type":"exact"}],"termid":"GO:0042785"}


id: GO:0004624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete secreted phospholipase A2 activity (obsolete GO:0004624)","synonyms":[{"name":"secreted phospholipase A2 activity","type":"exact"}],"termid":"GO:0004624"}


id: FYPO:0000477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiosis","synonyms":[{"name":"delayed meiosis","type":"exact"},{"name":"delayed onset of meiotic nuclear division","type":"exact"},{"name":"meiosis: delayed","type":"related"}],"termid":"FYPO:0000477"}


id: PBO:0064663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4F","termid":"PBO:0064663"}


id: PBO:0053915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1210","termid":"PBO:0053915"}


id: GO:0050832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to fungus","secondary_identifiers":["GO:0009817","GO:0009623","GO:0042831"],"synonyms":[{"name":"defence response to fungi","type":"exact"},{"name":"defence response to fungus","type":"exact"},{"name":"defense response to fungi","type":"exact"},{"name":"defense response to fungus, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogenic fungi","type":"narrow"},{"name":"resistance response to pathogenic fungus","type":"narrow"},{"name":"response to parasitic fungi","type":"narrow"},{"name":"response to parasitic fungus","type":"narrow"}],"termid":"GO:0050832"}


id: PBO:0084301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Involved in SRP-independent protein targeting to the ER; component of an alternative ER-targeting pathway partially redundant with the GET pathway that can compensate for SRP loss; preference for substrates with downstream transmembrane domains; interacts with Snd1p, Env10p/Snd2p, and Sec61p-translocon subunits; role in establishing nucleus-vacuole junctions (NVJs) in high glucose; targeted to the NVJ during glucose starvation to facilitate expansion; role in phosphate transport with Pho86p","termid":"PBO:0084301"}


id: GO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + L-pipecolate = NADPH + delta1-piperideine-2-carboxylate.","definition_xrefs":["EC:1.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"delta1-piperideine-2-carboxylate reductase activity","secondary_identifiers":["MetaCyc:RXN-8166","RHEA:12524"],"synonyms":[{"name":"1,2-didehydropipecolate reductase activity","type":"related"},{"name":"1,2-didehydropipecolic reductase activity","type":"related"},{"name":"D1-piperideine-2-carboxylate reductase activity","type":"exact"},{"name":"L-pipecolate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"P2C reductase activity","type":"related"},{"name":"delta 1-piperideine-2-carboxylate reductase activity","type":"exact"}],"termid":"GO:0047125"}


id: PBO:0053401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 331","termid":"PBO:0053401"}


id: PR:O94278
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi5 gene.","definition_xrefs":["UniProtKB:O94278","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine repressible genes regulatory protein thi5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.30c","synonyms":[{"name":"Spom972h-thi5","type":"exact"},{"name":"transcription factor ntf1 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94278"}


id: GO:0070194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of a synaptonemal complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"synaptonemal complex organization","termid":"GO:0070193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptonemal complex disassembly","termid":"GO:0070194"}


id: GO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 3-sulfino-L-alanine (cysteinesulfinate) (out) + H+(in) + L-glutamate(in) = 3-sulfino-L-alanine(in) + H+(out) + L-glutamate(out).","definition_xrefs":["RHEA:70967","PMID:11566871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"},{"relation_name":"is_a","term_name":"sulfur-containing amino acid secondary active transmembrane transporter activity","termid":"GO:1901680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"3-sulfino-L-alanine: proton, glutamate antiporter activity","termid":"GO:0000514"}


id: GO:1901856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular respiration.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"negatively_regulates","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular respiration","synonyms":[{"name":"down regulation of cellular respiration","type":"exact"},{"name":"down regulation of oxidative metabolic process","type":"exact"},{"name":"down regulation of oxidative metabolism","type":"exact"},{"name":"down regulation of respiration","type":"broad"},{"name":"down-regulation of cellular respiration","type":"exact"},{"name":"down-regulation of oxidative metabolic process","type":"exact"},{"name":"down-regulation of oxidative metabolism","type":"exact"},{"name":"down-regulation of respiration","type":"broad"},{"name":"downregulation of cellular respiration","type":"exact"},{"name":"downregulation of oxidative metabolic process","type":"exact"},{"name":"downregulation of oxidative metabolism","type":"exact"},{"name":"downregulation of respiration","type":"broad"},{"name":"inhibition of cellular respiration","type":"narrow"},{"name":"inhibition of oxidative metabolic process","type":"exact"},{"name":"inhibition of oxidative metabolism","type":"exact"},{"name":"inhibition of respiration","type":"broad"},{"name":"negative regulation of oxidative metabolic process","type":"exact"},{"name":"negative regulation of oxidative metabolism","type":"exact"},{"name":"negative regulation of respiration","type":"broad"}],"termid":"GO:1901856"}


id: FYPO:0004764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body","termid":"FYPO:0003541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"normal protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"normal protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004764"}


id: GO:0034499
data:
  {"annotated_genes":["SJAG_00314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107724],"is_not":false,"summary":null,"term":"GO:0034499"}]},"cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"late endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PVE to Golgi transport","type":"exact"},{"name":"prevacuolar endosome to Golgi transport","type":"exact"}],"termid":"GO:0034499","terms_by_termid":{"GO:0034499":null}}


id: PBO:0004818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof12","termid":"PBO:0004818"}


id: PBO:0042749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein U pseudogene 2","termid":"PBO:0042749"}


id: GO:0042357
data:
  {"annotated_genes":["SJAG_03362","SJAG_02421","SJAG_04866","SJAG_04282","SJAG_02420","SJAG_00381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89918,77016,108840,109251,111210,108834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiamine diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"TPP metabolic process","type":"exact"},{"name":"TPP metabolism","type":"exact"},{"name":"thiamin diphosphate metabolic process","type":"exact"},{"name":"thiamin diphosphate metabolism","type":"exact"},{"name":"thiamin pyrophosphate metabolic process","type":"exact"},{"name":"thiamin pyrophosphate metabolism","type":"exact"},{"name":"thiamine diphosphate metabolism","type":"exact"},{"name":"thiamine pyrophosphate metabolic process","type":"exact"},{"name":"thiamine pyrophosphate metabolism","type":"exact"}],"termid":"GO:0042357","terms_by_termid":{"GO:0009229":null}}


id: PBO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 7","termid":"PBO:0048444"}


id: PR:Q92342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F8.04c gene.","definition_xrefs":["UniProtKB:Q92342","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.04c","synonyms":[{"name":"Spom972h-SPAC1F8.04c","type":"exact"}],"termid":"PR:Q92342"}


id: PBO:0068639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 20, pseudogene","termid":"PBO:0068639"}


id: GO:0042335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cuticle, the outer layer of some animals and plants, which acts to prevent water loss.","definition_xrefs":["ISBN:0192800825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle development","synonyms":[{"name":"cuticle anabolism","type":"exact"},{"name":"cuticle biosynthesis","type":"exact"},{"name":"cuticle biosynthetic process","type":"exact"},{"name":"cuticle formation","type":"exact"},{"name":"cuticle synthesis","type":"exact"}],"termid":"GO:0042335"}


id: GO:0040011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion","termid":"GO:0040011"}


id: PBO:0084482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific component of the sister chromatid cohesion complex; alpha-kleisin family member that maintains cohesion between homologous chromosomes during meiosis I until chromosome arm-associated Rec8p is cleaved by Esp1p; cohesion between sister chromatid centromeres is maintained until metaphase of meiosis II when it is cleaved by Esp1; independent of the role in cohesion, Rec8p promotes allelic collisions and prevents nonspecific chromosome interactions; homolog of S. pombe Rec8p","termid":"PBO:0084482"}


id: GO:0009636
data:
  {"annotated_genes":["SJAG_01651","SJAG_01803","SJAG_00179","SJAG_02515","SJAG_02960","SJAG_00365","SJAG_03476","SJAG_04242","SJAG_00489","SJAG_02106","SJAG_00668","SJAG_04403","SJAG_00614","SJAG_02907","SJAG_01734","SJAG_02010","SJAG_03303","SJAG_03288","SJAG_01596","SJAG_03108","SJAG_03797","SJAG_03316","SJAG_06611","SJAG_02599","SJAG_01292","SJAG_04125","SJAG_04404","SJAG_01612","SJAG_03951","SJAG_02973","SJAG_02276","SJAG_01145","SJAG_04608","SJAG_01404","SJAG_01351","SJAG_03497","SJAG_00219","SJAG_04953","SJAG_04063","SJAG_05256","SJAG_04726","SJAG_04823","SJAG_00270","SJAG_03653","SJAG_01216","SJAG_03166","SJAG_00903","SJAG_01973","SJAG_01628","SJAG_02247","SJAG_01344","SJAG_00141","SJAG_00988","SJAG_02630","SJAG_04788","SJAG_04632","SJAG_04516","SJAG_03494","SJAG_01199","SJAG_04399","SJAG_01995","SJAG_01162","SJAG_01457","SJAG_01078","SJAG_05181","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98255,88761,95356,94740,95831,99066,109824,113278,83771,94562,113827,113692,83868,93926,90559,102003,107556,108709,109922,90302,92684,98326,104066,108267,108745,88760,85843],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990748"},{"annotations":[107986],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[89403,70927,89404,92593,113303,88940,92632,103787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[108987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"},{"annotations":[104185,90799,100450,112513,113386,95511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[100455],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[97696,83214],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[100631,57181,97291,102184,100713],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098869"},{"annotations":[70928],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010273"},{"annotations":[89406,89405],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"},{"annotations":[77085,91136],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[94812,85154,84743,95668,93518,88771,57890,69130,105462,105417,100452],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[113069,92078,112184],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":66,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01078":null,"SJAG_01145":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01803":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03363":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03653":null,"SJAG_03797":null,"SJAG_03951":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to toxic substance","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"detoxification response","type":"narrow"},{"name":"toxin resistance","type":"related"},{"name":"toxin susceptibility/resistance","type":"related"}],"termid":"GO:0009636","terms_by_termid":{"GO:0010273":null,"GO:0010312":null,"GO:0019430":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1990748":null,"GO:1990961":null}}


id: PBO:0056244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium transporter 1","termid":"PBO:0056244"}


id: PBO:0055973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 3","termid":"PBO:0055973"}


id: PBO:0041231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 53","termid":"PBO:0041231"}


id: GO:0045025
data:
  {"annotated_genes":["SJAG_02991"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70905],"is_not":false,"summary":null,"term":"GO:0045025"}]},"cv_name":"cellular_component","definition":"A mitochondrial protein complex with 3' to 5' exoribonuclease activity that participates in intron-independent turnover and processing of mitochondrial transcripts. In humans, the mitochondrial degradosome is a pentameric complex, and in yeast it exists as a heterodimer.","definition_xrefs":["PMID:10397341","PMID:9829834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic exosome (RNase complex)","termid":"GO:0000177"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial degradosome","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"mtEXO","type":"exact"}],"termid":"GO:0045025","terms_by_termid":{"GO:0045025":null}}


id: PBO:0090884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex tRNA uridine(34) acetyltransferase subunit Elp3","termid":"PBO:0090884"}


id: GO:0034453
data:
  {"annotated_genes":["SJAG_03062","SJAG_03835","SJAG_01546","SJAG_01613","SJAG_03116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[94763,98501,73632,92355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule anchoring","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0034453","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0005856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf18","termid":"PBO:0005856"}


id: FYPO:0001458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"},{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone lysine H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001458"}


id: PBO:0110258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/Las1 complex polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0110258"}


id: PBO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1 pseudogene 2","termid":"PBO:0048395"}


id: GO:1904413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GOC:TermGenie","PMID:19590510","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle development","termid":"GO:1904412"},{"relation_name":"negatively_regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac ventricle development","synonyms":[{"name":"down regulation of cardiac ventricle development","type":"exact"},{"name":"down-regulation of cardiac ventricle development","type":"exact"},{"name":"downregulation of cardiac ventricle development","type":"exact"},{"name":"inhibition of cardiac ventricle development","type":"narrow"}],"termid":"GO:1904413"}


id: PBO:0088027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)","termid":"PBO:0088027"}


id: PBO:0053086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1D","termid":"PBO:0053086"}


id: GO:0103098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + tetrahomomethionine + 2 O2 + 2 NADPH = 3 H2O + carbon dioxide + 2 NADP + 7-methylthioheptanaldoxime.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"CYP79F1 tetrahomomethionine monooxygenase activity","secondary_identifiers":["MetaCyc:RXNQT-4311"],"termid":"GO:0103098"}


id: PATO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical object that is currently realizing none of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation quality","termid":"PATO:0002353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive","termid":"PATO:0002355"}


id: PBO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2/M_phase_transition","termid":"PBO:0031796"}


id: FYPO:0004383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle","synonyms":[{"name":"advanced protein localization to mitotic spindle","type":"exact"},{"name":"precocious protein localization to mitotic spindle","type":"related"},{"name":"premature protein localisation to mitotic spindle","type":"exact"},{"name":"premature protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle during mitosis","type":"exact"},{"name":"premature protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004383"}


id: FYPO:0007821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which vacuoles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"large vacuoles","synonyms":[{"name":"enlarged vacuoles","type":"exact"}],"termid":"FYPO:0007821"}


id: GO:0015705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of iodide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"iodide transport","termid":"GO:0015705"}


id: PBO:0062954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like","termid":"PBO:0062954"}


id: PBO:0076341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 9","termid":"PBO:0076341"}


id: GO:1904489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in regulation of reactive oxygen species metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:25961505","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of reactive oxygen species metabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904489)","synonyms":[{"name":"regulation of ROS metabolic process by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904489"}


id: PBO:0067250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 323, pseudogene","termid":"PBO:0067250"}


id: PBO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RPC40","termid":"PBO:0016572"}


id: PBO:0028434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_superoxide_dismutase_activity","termid":"PBO:0028434"}


id: PBO:0085806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; down-regulated at low calcium levels; mCherry fusion protein localizes to the vacuole","termid":"PBO:0085806"}


id: PBO:0081232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 12","termid":"PBO:0081232"}


id: PBO:0052207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 3","termid":"PBO:0052207"}


id: PBO:0040548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2","termid":"PBO:0040548"}


id: GO:0000026
data:
  {"annotated_genes":["SJAG_05327","SJAG_03082","SJAG_00598","SJAG_04906","SJAG_00747","SJAG_02519","SJAG_01021","SJAG_03878","SJAG_01264","SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74130,74326,74386,74925,76117,76417,76973,78066],"is_not":false,"summary":null,"term":"GO:0000026"},{"annotations":[86816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052926"},{"annotations":[86817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052918"},{"annotations":[75977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->2) linkage.","definition_xrefs":["GOC:mcc","PMID:10521541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_03878":null,"SJAG_04906":null,"SJAG_05327":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-446215","Reactome:R-HSA-446216","Reactome:R-HSA-9035514","Reactome:R-HSA-4720478","Reactome:R-HSA-4551297","Reactome:R-HSA-446187"],"termid":"GO:0000026","terms_by_termid":{"GO:0000026":null,"GO:0004377":null,"GO:0052918":null,"GO:0052926":null}}


id: GO:0031530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for gonadotropin-releasing hormone (GnRH), a peptide hormone that is synthesized and released by the hypothalamus and is responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary.","definition_xrefs":["PMID:15196882","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor binding","synonyms":[{"name":"GnRH receptor binding","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor binding","type":"exact"}],"termid":"GO:0031530"}


id: PBO:0003317
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.3","termid":"PBO:0003317"}


id: FYPO:0006765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}


id: PBO:0089057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1","termid":"PBO:0089057"}


id: FYPO:0001975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing nocodazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on nocodazole","synonyms":[{"name":"normal cell population growth in presence of nocodazole","type":"exact"},{"name":"normal cell population growth on nocodazole","type":"exact"},{"name":"normal cellular response to nocodazole","type":"related"},{"name":"normal vegetative cell population growth on nocodazole","type":"exact"}],"termid":"FYPO:0001975"}


id: GO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"negatively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somitomeric trunk muscle development","termid":"GO:0014710"}


id: FYPO:0002696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylenetetrahydrofolate reductase (NADPH) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished methylenetetrahydrofolate reductase (NADPH) activity","synonyms":[{"name":"methylenetetrahydrofolate reductase (NADPH) activity abolished","type":"exact"}],"termid":"FYPO:0002696"}


id: PBO:0068515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 107, pseudogene","termid":"PBO:0068515"}


id: GO:0031072
data:
  {"annotated_genes":["SJAG_01670","SJAG_01186","SJAG_00403","SJAG_04518","SJAG_01160","SJAG_01052","SJAG_01914","SJAG_00750","SJAG_01874","SJAG_00790","SJAG_03784","SJAG_03135","SJAG_01615","SJAG_03237","SJAG_04055","SJAG_03094","SJAG_03955","SJAG_00436"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63475,70342,70901,70984,71764,72374,72489,75250,78770],"is_not":false,"summary":null,"term":"GO:0031072"},{"annotations":[76859,66541,67071,71233,58578,78406,78603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"},{"annotations":[76862,78409,75720,75835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to a heat shock protein, a protein synthesized or activated in response to heat shock.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00750":null,"SJAG_00790":null,"SJAG_01052":null,"SJAG_01160":null,"SJAG_01186":null,"SJAG_01615":null,"SJAG_01670":null,"SJAG_01874":null,"SJAG_01914":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03237":null,"SJAG_03784":null,"SJAG_03955":null,"SJAG_04055":null,"SJAG_04518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"heat shock protein binding","references_by_uniquename":{"GO_REF:0000002":null,"PMID:21873635":null},"termid":"GO:0031072","terms_by_termid":{"GO:0030544":null,"GO:0031072":null,"GO:0051879":null}}


id: PATO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000717 viability value (obsolete PATO:0000717)","termid":"PATO:0000717"}


id: FYPO:0001051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), entering mitosis when longer than wild type.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe, elongated cell (obsolete FYPO:0001051)","synonyms":[{"name":"mitotic catastrophe, elongated cell during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe, elongated cell during vegetative growth","type":"exact"},{"name":"mitotic catastrophe, long cell","type":"exact"}],"termid":"FYPO:0001051"}


id: PBO:0045361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 1","termid":"PBO:0045361"}


id: SO:1001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Four base pair sequence immediately downstream of the redefined region. The redefined region is a frameshift site. The quadruplet is 2 overlapping codons.","definition_xrefs":["PMID:12519954","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_three_prime_quadruplet_recoding_signal","synonyms":[{"name":"flanking three prime quadruplet recoding signal","type":"exact"}],"termid":"SO:1001281"}


id: PBO:0077606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 12","termid":"PBO:0077606"}


id: PBO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 39","termid":"PBO:0060051"}


id: PBO:0071857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 52","termid":"PBO:0071857"}


id: GO:0050485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y and the acceptor is disulfide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","secondary_identifiers":["EC:1.21.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulphide as acceptor","type":"exact"}],"termid":"GO:0050485"}


id: GO:2001238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"positive regulation of extrinsic apoptosis","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001238"}


id: GO:0061378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the corpora quadrigemina over time, from its formation to the mature structure. The corpora quadrigemina is a part of the midbrain that is made up of the superior and inferior colliculi.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpora quadrigemina development","termid":"GO:0061378"}


id: PBO:0029586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_binding","termid":"PBO:0029586"}


id: GO:0050220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin E(2).","definition_xrefs":["EC:5.3.99.3","RHEA:12893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"prostaglandin-E synthase activity","secondary_identifiers":["KEGG_REACTION:R02265","Reactome:R-HSA-2161660","Reactome:R-HSA-265295","MetaCyc:PROSTAGLANDIN-E-SYNTHASE-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"related"},{"name":"PGE isomerase activity","type":"related"},{"name":"PGE2 isomerase activity","type":"related"},{"name":"PGH-PGE isomerase activity","type":"related"},{"name":"Prostaglandin-H(2) E-isomerase activity","type":"related"},{"name":"endoperoxide isomerase activity","type":"related"},{"name":"prostaglandin H-E isomerase activity","type":"related"},{"name":"prostaglandin R-prostaglandin E isomerase activity","type":"related"},{"name":"prostaglandin endoperoxide E isomerase activity","type":"related"},{"name":"prostaglandin endoperoxide E2 isomerase activity","type":"related"},{"name":"prostaglandin-H2 E-isomerase activity","type":"related"}],"termid":"GO:0050220"}


id: PBO:0061818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 8 Y-linked","termid":"PBO:0061818"}


id: GO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP-independent ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER following transport from the cytosol via a TAP-independent pathway. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:15771591","PMID:14647477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","termid":"GO:0002484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002486"}


id: FYPO:0002247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of glucose binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased glucose binding","synonyms":[{"name":"reduced glucose binding","type":"exact"}],"termid":"FYPO:0002247"}


id: PBO:0038525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 5","termid":"PBO:0038525"}


id: GO:0032754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-5 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-5 production","termid":"GO:0032674"},{"relation_name":"positively_regulates","term_name":"interleukin-5 production","termid":"GO:0032634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-5 production","secondary_identifiers":["GO:2000664","GO:0045407"],"synonyms":[{"name":"activation of interleukin-5 production","type":"narrow"},{"name":"positive regulation of IL-5 production","type":"exact"},{"name":"positive regulation of interleukin-5 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-5 secretion","type":"narrow"},{"name":"stimulation of interleukin-5 production","type":"narrow"},{"name":"up regulation of interleukin-5 production","type":"exact"},{"name":"up-regulation of interleukin-5 production","type":"exact"},{"name":"upregulation of interleukin-5 production","type":"exact"}],"termid":"GO:0032754"}


id: GO:0051542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of elastin, a fibrous glycoprotein found in elastic tissues such as the walls of arteries.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"},{"relation_name":"is_a","term_name":"elastin metabolic process","termid":"GO:0051541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elastin biosynthetic process","termid":"GO:0051542"}


id: PBO:0060575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 11","termid":"PBO:0060575"}


id: PBO:0030002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_P-bodies","termid":"PBO:0030002"}


id: GO:0000293
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052851"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe3+-siderophore + electron donor -> 2 Fe3+-siderophore + electron acceptor.","definition_xrefs":["PMID:33559753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ferric-chelate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ferric chelate reductase activity","type":"exact"},{"name":"iron chelate reductase activity","type":"exact"}],"termid":"GO:0000293","terms_by_termid":{"GO:0052851":null}}


id: GO:1905680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immunity memory response","termid":"GO:1905680"}


id: PBO:0091177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating cysteine peptidase Ulp2","termid":"PBO:0091177"}


id: GO:0061638
data:
  {"annotated_genes":["SJAG_04038","SJAG_01745","SJAG_00170","SJAG_03126","SJAG_00768","SJAG_01050","SJAG_00307","SJAG_02778","SJAG_01332"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85789,87005,87724,101698,104995,107227,111700,112297],"is_not":false,"summary":null,"term":"GO:0061638"},{"annotations":[97535],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"The specialized chromatin located in the centromeric core region or the entire centromeric region in organisms with point centromeres, which is enriched for CENP-A-containing nucleosomes. This chromatin forms a 3-dimensional structure which provides a platform for kinetochore assembly and microtubule attachment.","definition_xrefs":["GOC:vw","PMID:22729156","PMID:20206496","PMID:24710126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"chromosome, centromeric core domain","termid":"GO:0034506"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00307":null,"SJAG_00768":null,"SJAG_01050":null,"SJAG_01332":null,"SJAG_01745":null,"SJAG_02778":null,"SJAG_03126":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"CENP-A containing chromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1904834"],"synonyms":[{"name":"centromeric core domain chromatin","type":"related"},{"name":"centromeric core region chromatin","type":"exact"},{"name":"chromatin containing CENP-A","type":"exact"},{"name":"nuclear CENP-A containing chromatin","type":"narrow"}],"termid":"GO:0061638","terms_by_termid":{"GO:0043505":null,"GO:0061638":null}}


id: PBO:0056681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2D","termid":"PBO:0056681"}


id: FYPO:0006011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly occurs along the lateral portion of the long axis of the cell instead of at one cell end.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"shmoo formation at cell side","synonyms":[{"name":"lateral shmoo formation","type":"exact"},{"name":"mating projection assembly at cell side","type":"exact"},{"name":"shmoo formation on cell side","type":"exact"}],"termid":"FYPO:0006011"}


id: FYPO:0007053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to zinc ion starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to zinc ion starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"decreased protein level during cellular response to zinc ion depletion","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion deprivation","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion limitation","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during cellular response to zinc starvation","type":"exact"},{"name":"reduced protein level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007053"}


id: GO:0008193
data:
  {"annotated_genes":["SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73056],"is_not":false,"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of a tRNA molecule; observed for His tRNAs.","definition_xrefs":["PMID:1660461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003824","GO:0016779","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA guanylyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:2.7.7.79","RHEA:54564"],"termid":"GO:0008193","terms_by_termid":{"GO:0008193":null}}


id: GO:0035168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the larval lymph gland acquires the specialized features of a mature hemocyte. The lymph gland consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:14602069","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"},{"relation_name":"part_of","term_name":"larval lymph gland hemopoiesis","termid":"GO:0035167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval lymph gland hemocyte differentiation","synonyms":[{"name":"larval lymph gland arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0035168"}


id: PBO:0042859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 77","termid":"PBO:0042859"}


id: PBO:0063152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-apoptotic WT1 regulator","termid":"PBO:0063152"}


id: PBO:0075483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 1","termid":"PBO:0075483"}


id: SO:1000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal mutation. Rearrangements that alter the pairing of telomeres are classified as translocations.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation","termid":"SO:0000199"},{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_translocation","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_translocation"],"synonyms":[{"name":"(Drosophila)T","type":"related"},{"name":"(fungi)T","type":"related"},{"name":"chromosomal translocation","type":"exact"}],"termid":"SO:1000044"}


id: GO:0047476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + 3-alpha,7-alpha-dihydroxy-5-beta-cholestanate + ATP = 3-alpha,7-alpha-dihydroxy-5-beta-cholestanoyl-CoA + diphosphate + AMP.","definition_xrefs":["EC:6.2.1.28","MetaCyc:6.2.1.28-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"3-alpha,7-alpha-dihydroxy-5-beta-cholestanate-CoA ligase activity","secondary_identifiers":["RHEA:21776"],"synonyms":[{"name":"3alpha,7alpha-dihydroxy-5beta-cholestanate-CoA ligase activity","type":"related"},{"name":"3alpha,7alpha-dihydroxy-5beta-cholestanate:CoA ligase (AMP-forming)","type":"related"},{"name":"3alpha,7alpha-dihydroxy-5beta-cholestanoyl coenzyme A synthetase activity","type":"related"},{"name":"DHCA-CoA ligase activity","type":"related"}],"termid":"GO:0047476"}


id: FYPO:0002425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable organization is abnormal during mitosis. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cable. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["GO:0070648","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cable organization during mitosis","synonyms":[{"name":"abnormal actin cable organisation during mitotic interphase","type":"exact"},{"name":"abnormal actin cable organization during mitotic M phase","type":"related"},{"name":"abnormal actin cable organization during mitotic interphase during vegetative growth","type":"exact"},{"name":"abnormal actin cable organization during mitotic nuclear division","type":"exact"},{"name":"abnormal formin-nucleated actin cable organization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002425"}


id: GO:0043124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a canonical NF-kappaB signaling cascade.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of canonical NF-kappaB signal transduction","termid":"GO:0043122"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"canonical NF-kappaB signal transduction","termid":"GO:0007249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of canonical NF-kappaB signal transduction","synonyms":[{"name":"down regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"down-regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"downregulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"inhibition of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"negative regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"negative regulation of I-kappaB kinase/NF-kappaB signaling","type":"exact"}],"termid":"GO:0043124"}


id: FYPO:0007243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is normal (i.e. indistinguishable from wild type) in one, and premature in the other, of the daughter cells formed as a result of the division of a mother cell in which NETO did not occurs. NETO is normal in the daughter cell that inherits the parent cell's old end, and begins earlier than normal in the daughter cell that inherits parent cell's new end. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PMID:31719163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO in daughter cells","termid":"FYPO:0007240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005568","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end","synonyms":[{"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end during mitotic cell cycle","type":"related"},{"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end during vegetative growth","type":"exact"},{"name":"normal activation of bipolar cell growth in cell derived from growing end and premature activation of bipolar cell growth in cell derived from non-growing end","type":"related"},{"name":"normal cell growth mode switching, monopolar to bipolar in cell derived from growing end and premature cell growth mode switching, monopolar to bipolar in cell derived from non-growing end","type":"exact"},{"name":"normal new end take-off in cell derived from growing end and premature NETO in cell derived from non-growing end","type":"exact"},{"name":"normal switch from monopolar to bipolar cell growth in cell derived from growing end and premature switch from monopolar to bipolar cell growth in cell derived from non-growing end","type":"exact"}],"termid":"FYPO:0007243"}


id: PBO:0073448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 2","termid":"PBO:0073448"}


id: PR:O94620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U5 small nuclear ribonucleoprotein 40 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04119","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.11","secondary_identifiers":["UniProtKB:O94620"],"synonyms":[{"name":"Spom972h-SNRNP40","type":"exact"},{"name":"complexed with cdc5 protein 17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94620"}


id: GO:1990080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine 2-phenylethylamine to initiate a change in cell activity.","definition_xrefs":["PMID:16878137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"2-phenylethylamine receptor activity","synonyms":[{"name":"beta-phenylethylamine receptor activity","type":"exact"}],"termid":"GO:1990080"}


id: GO:0021965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the spinal cord ventral commissure are generated and organized.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord ventral commissure morphogenesis","termid":"GO:0021965"}


id: PBO:0045025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in renal carcinoma 3","termid":"PBO:0045025"}


id: GO:0070731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic GMP (cGMP), into, out of or within a cell.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transport","termid":"GO:0001408"},{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cGMP transport","synonyms":[{"name":"cyclic GMP transport","type":"exact"}],"termid":"GO:0070731"}


id: GO:0098061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a virus contained within the capsid shell, and usually containing the viral genome and accessory proteins.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, internal space","synonyms":[{"name":"internal head protein","type":"exact"}],"termid":"GO:0098061"}


id: GO:0090067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the thalamus. The thalamus is a part of the diencephalon that is composed of the dorsal thalamus and the ventral thalamus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thalamus size","termid":"GO:0090067"}


id: PBO:0052875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 7-1","termid":"PBO:0052875"}


id: PBO:0038452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AARSD1 pseudogene 1","termid":"PBO:0038452"}


id: PBO:0053412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 349","termid":"PBO:0053412"}


id: PR:Q9UUI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 100 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.05","synonyms":[{"name":"Spom972h-SPAC22F8.05","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI7"}


id: PBO:0035992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0035992"}


id: PBO:0057947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-3","termid":"PBO:0057947"}


id: PBO:0087828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) middle subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP30","termid":"PBO:0087828"}


id: PR:O94544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leukotriene A-4 hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04625","PRO:DNx","PANTHER:PTHR11533:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A-4 hydrolase homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.05c","secondary_identifiers":["UniProtKB:O94544"],"synonyms":[{"name":"LTA-4 hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LTA4H","type":"exact"},{"name":"leukotriene A(4) hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94544"}


id: PBO:0050759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 21","termid":"PBO:0050759"}


id: GO:1905241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","GOC:BHF","PMID:19342382","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905241)","synonyms":[{"name":"activation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905241"}


id: PBO:0085938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mtc2 is synthetically sick with cdc13-1","termid":"PBO:0085938"}


id: GO:0034309
data:
  {"annotated_genes":["SJAG_01970","SJAG_03362","SJAG_02421","SJAG_04282","SJAG_02420","SJAG_00381","SJAG_02406","SJAG_04866","SJAG_00827","SJAG_03538","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108930,84795],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[73629,70519,73673,76191,77326,102759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[105761,105762,95046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"primary alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"monohydric alcohol biosynthetic process","type":"exact"},{"name":"primary alcohol anabolism","type":"exact"},{"name":"primary alcohol biosynthesis","type":"exact"},{"name":"primary alcohol formation","type":"exact"},{"name":"primary alcohol synthesis","type":"exact"}],"termid":"GO:0034309","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: PR:Q9UT08
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- paa1 gene.","definition_xrefs":["UniProtKB:Q9UT08","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.09c","synonyms":[{"name":"PR65 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-paa1","type":"exact"},{"name":"protein phosphatase 2A 65 kDa regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT08"}


id: PBO:0075665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1","termid":"PBO:0075665"}


id: PBO:0076367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 4, pseudogene","termid":"PBO:0076367"}


id: PBO:0053399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 328-2, pseudogene","termid":"PBO:0053399"}


id: PBO:0067283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 364, pseudogene","termid":"PBO:0067283"}


id: FYECO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a microtubule depolymerizing drug was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ microtubule depolymerizing drugs","synonyms":[{"name":"+ MBC","type":"narrow"}],"termid":"FYECO:0000235"}


id: PBO:0027883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation","termid":"PBO:0027883"}


id: GO:0006942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle contraction","termid":"GO:0006942"}


id: PBO:0029149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hygromycin_B","termid":"PBO:0029149"}


id: GO:0000160
data:
  {"annotated_genes":["SJAG_01587","SJAG_02498","SJAG_06592","SJAG_00331","SJAG_02472","SJAG_02183","SJAG_00318","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66243,66642,69683,86845,90860,107104,107746,113378],"is_not":false,"summary":null,"term":"GO:0000160"}]},"cv_name":"biological_process","definition":"A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.","definition_xrefs":["PMID:9191038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00318":null,"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null,"SJAG_02472":null,"SJAG_02498":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phosphorelay signal transduction system","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"histidyl-aspartyl phosphorelay","type":"exact"}],"termid":"GO:0000160","terms_by_termid":{"GO:0000160":null}}


id: PBO:0049364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 23","termid":"PBO:0049364"}


id: GO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous ATP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in vertebrate species.","definition_xrefs":["PMID:17786051","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA exon ligation","termid":"GO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA exon ligation utilizing ATP as source of linkage phosphate","termid":"GO:0000969"}


id: GO:0021540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the corpus callosum are generated and organized. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres.","definition_xrefs":["ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"corpus callosum development","termid":"GO:0022038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpus callosum morphogenesis","termid":"GO:0021540"}


id: PBO:0064809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R2 family member B","termid":"PBO:0064809"}


id: PBO:0012542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_agent","termid":"PBO:0012542"}


id: PBO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglutamate synthase","termid":"PBO:0060455"}


id: GO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains ribosomal RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete rRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071428)","synonyms":[{"name":"rRNA-containing RNP export from nucleus","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071428"}


id: FYPO:0005331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-prone translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-prone translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005331"}


id: PBO:0036417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein, human TMEM186 ortholog","termid":"PBO:0036417"}


id: GO:0060481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lobar bronchus epithelium from an initial condition to its mature state. This process begins with the formation of the lobar bronchus epithelium and ends with the mature structure. The lobar bronchus epithelium is the tissue made up of epithelial cells that lines the inside of the lobar bronchus.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lobar bronchus development","termid":"GO:0060482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lobar bronchus epithelium development","termid":"GO:0060481"}


id: PATO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The specific wavelength of light emitted by a fluorescent molecule, such as a labelled probe, upon absorption of light at the (higher) excitation wavelength.","definition_xrefs":["web:http://www.expertglossary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emmision wavelength","termid":"PATO:0002059"}


id: GO:0016137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside metabolic process","secondary_identifiers":["GO:0016140"],"synonyms":[{"name":"O-glycoside metabolic process","type":"exact"},{"name":"O-glycoside metabolism","type":"exact"},{"name":"glycoside metabolism","type":"exact"}],"termid":"GO:0016137"}


id: PBO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C9","termid":"PBO:0045220"}


id: PBO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 5","termid":"PBO:0042967"}


id: PBO:0089585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing","termid":"PBO:0089585"}


id: PBO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.100","termid":"PBO:0001920"}


id: PBO:0029301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell_during_G0","termid":"PBO:0029301"}


id: GO:0030833
data:
  {"annotated_genes":["SJAG_03086","SJAG_00279","SJAG_00521","SJAG_01993","SJAG_04982","SJAG_04100","SJAG_02700","SJAG_04479","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76310,78234,86389,100576],"is_not":false,"summary":null,"term":"GO:0030833"},{"annotations":[77998,87977,78690,75051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[75055,72073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"regulates","term_name":"actin filament polymerization","termid":"GO:0030041"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of actin filament polymerization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of actin polymerization","type":"exact"}],"termid":"GO:0030833","terms_by_termid":{"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: PBO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase (predicted)","termid":"PBO:0002574"}


id: PBO:0062050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 2 pseudogene","termid":"PBO:0062050"}


id: PBO:0049740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit delta","termid":"PBO:0049740"}


id: PR:Q9USM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg20 gene.","definition_xrefs":["UniProtKB:Q9USM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.08","synonyms":[{"name":"Spom972h-atg20","type":"exact"}],"termid":"PR:Q9USM8"}


id: GO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"regulates","term_name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell cytokine production","termid":"GO:0002733"}


id: FYPO:0003458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity does not increase as a result of a salt stress stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity increase abolished during cellular response to salt stress","synonyms":[{"name":"absent increase in trehalase activity in response to salt stress","type":"exact"},{"name":"neutral trehalase activity increase abolished during cellular response to salt stress","type":"exact"},{"name":"trehalase activity increase abolished during cellular response to salt stress","type":"broad"}],"termid":"FYPO:0003458"}


id: FYPO:0002661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose 6-phosphate level","termid":"FYPO:0002660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular trehalose 6-phosphate level during heat shock","synonyms":[{"name":"decreased cellular trehalose 6-phosphate level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose 6-phosphate level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased cellular trehalose-6P level during heat shock","type":"exact"},{"name":"decreased trehalose 6-phosphate accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose 6-phosphate level during heat shock","type":"exact"}],"termid":"FYPO:0002661"}


id: PR:O14043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.10c","synonyms":[{"name":"Spom972h-csc4","type":"exact"}],"termid":"PR:O14043"}


id: PBO:0069803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1089, pseudogene","termid":"PBO:0069803"}


id: GO:0010946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic joint molecule formation. Meiotic joint molecule formation is the conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic joint molecule formation","termid":"GO:0000709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic joint molecule formation","termid":"GO:0010946"}


id: PATO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer that is shaped in the form of a fan.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/fan-shaped"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fan-shaped","synonyms":[{"name":"fan-like","type":"exact"}],"termid":"PATO:0002219"}


id: GO:0045899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of RNA polymerase II transcription preinitiation complex assembly","termid":"GO:0045898"},{"relation_name":"is_a","term_name":"positive regulation of transcription initiation by RNA polymerase II","termid":"GO:0060261"},{"relation_name":"positively_regulates","term_name":"RNA polymerase II preinitiation complex assembly","termid":"GO:0051123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0006355","GO:0065003","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"positive regulation of RNA polymerase II transcription preinitiation complex assembly","synonyms":[{"name":"activation of RNA polymerase II transcriptional preinitiation complex assembly","type":"narrow"},{"name":"positive regulation of RNA polymerase II transcriptional pre-initiation complex assembly","type":"exact"},{"name":"positive regulation of RNA polymerase II transcriptional pre-initiation complex biosynthesis","type":"exact"},{"name":"positive regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"positive regulation of RNA polymerase II transcriptional preinitiation complex formation","type":"exact"},{"name":"stimulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"narrow"},{"name":"up regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"up-regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"upregulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"}],"termid":"GO:0045899"}


id: GO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation that contributes to the shaping of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in kidney morphogenesis","termid":"GO:0061006"}


id: GO:0008527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"taste receptor activity","synonyms":[{"name":"gustatory receptor","type":"exact"}],"termid":"GO:0008527"}


id: GO:1902601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of silver ion across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion transmembrane transport","termid":"GO:0098660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"silver ion transmembrane transport","synonyms":[{"name":"silver transmembrane transport","type":"broad"}],"termid":"GO:1902601"}


id: FYPO:0003912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair via homologous recombination occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA recombination during vegetative growth","termid":"FYPO:0002340"},{"relation_name":"is_a","term_name":"decreased double-strand break repair during vegetative growth","termid":"FYPO:0003660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased double-strand break repair via homologous recombination","synonyms":[{"name":"decreased double-strand break repair via homologous recombination during mitotic cell cycle","type":"related"},{"name":"decreased double-strand break repair via homologous recombination during vegetative growth","type":"exact"},{"name":"reduced double-strand break repair via homologous recombination","type":"exact"}],"termid":"FYPO:0003912"}


id: PBO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"false positive GPI anchored protein pediction","termid":"PBO:0001203"}


id: GO:2000143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-templated transcription initiation.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"negatively_regulates","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA-templated transcription initiation","synonyms":[{"name":"negative regulation of DNA-dependent transcription, initiation","type":"exact"},{"name":"negative regulation of DNA-templated transcription, initiation","type":"exact"},{"name":"negative regulation of initiation of DNA-dependent transcription","type":"exact"},{"name":"negative regulation of transcription initiation, DNA-dependent","type":"exact"}],"termid":"GO:2000143"}


id: FYPO:0003679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to epirubicin. Cells stop growing (and may die) at a concentration of epirubicin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to epirubicin","synonyms":[{"name":"hypersensitive to epirubicin","type":"exact"},{"name":"sensitive to 4'-epidoxorubicin","type":"exact"},{"name":"sensitive to epirubicin during mitotic cell cycle","type":"related"},{"name":"sensitive to epirubicin during vegetative growth","type":"exact"}],"termid":"FYPO:0003679"}


id: GO:0005055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a laminin, a glycoprotein that constitutes the majority of proteins in the basement membrane, to initiate a change in cell activity.","definition_xrefs":["GOC:ai","PMID:2970671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0098631","GO:0005515"],"is_obsolete":false,"name":"laminin receptor activity","termid":"GO:0005055"}


id: PBO:0089130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor alpha subunit Srp101","termid":"PBO:0089130"}


id: PBO:0067427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 546, pseudogene","termid":"PBO:0067427"}


id: PBO:0031507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_starvation","termid":"PBO:0031507"}


id: FYPO:0007049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to zinc ion","termid":"FYPO:0001546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during stress response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to excess zinc","type":"exact"},{"name":"decreased RNA level during cellular response to high zinc level","type":"exact"},{"name":"decreased RNA level during cellular response to replete zinc","type":"related"},{"name":"decreased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased RNA level during response to zinc ion stress","type":"exact"},{"name":"decreased RNA level during response to zinc toxicity","type":"related"},{"name":"decreased RNA level during stress response to zinc","type":"exact"},{"name":"decreased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"decreased transcript level during stress response to zinc ion","type":"exact"},{"name":"reduced RNA level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007049"}


id: GO:1904727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:BHF_miRNA","PMID:23496142","GOC:BHF","GOC:rph","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"negatively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of replicative senescence","synonyms":[{"name":"down regulation of replicative senescence","type":"exact"},{"name":"down-regulation of replicative senescence","type":"exact"},{"name":"downregulation of replicative senescence","type":"exact"},{"name":"inhibition of replicative senescence","type":"narrow"}],"termid":"GO:1904727"}


id: PBO:0063089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 7","termid":"PBO:0063089"}


id: GO:0050237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + O2 = pyridoxal + H2O2.","definition_xrefs":["MetaCyc:PYRIDOXINE-4-OXIDASE-RXN","EC:1.1.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyridoxine 4-oxidase activity","secondary_identifiers":["RHEA:15033"],"synonyms":[{"name":"pyridoxin 4-oxidase activity","type":"related"},{"name":"pyridoxine:oxygen 4-oxidoreductase activity","type":"related"},{"name":"pyridoxol 4-oxidase activity","type":"related"}],"termid":"GO:0050237"}


id: FYPO:0006993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is decreased at the right outer repeat region (otr1R) of the centromere.","definition_xrefs":["PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere outer repeat","termid":"FYPO:0003412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere otr1R","synonyms":[{"name":"decreased centromere outer repeat region chromatin silencing at otr1R","type":"exact"},{"name":"decreased chromatin silencing at centromere otr1R during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere otr1R during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromere otr1R region","type":"exact"},{"name":"decreased chromatin silencing at centromeric otr1R","type":"exact"},{"name":"decreased chromatin silencing at pericentric region otr1R","type":"related"},{"name":"decreased chromatin silencing at pericentromeric region otr1R","type":"related"},{"name":"decreased heterochromatic silencing at centromere otr1R","type":"exact"},{"name":"decreased heterochromatin silencing at centromere otr1R","type":"exact"},{"name":"reduced chromatin silencing at centromere otr1R","type":"exact"}],"termid":"FYPO:0006993"}


id: FYPO:0001591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal histidine import","termid":"FYPO:0001655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histidine import","synonyms":[{"name":"decreased L-histidine import","type":"exact"},{"name":"decreased L-histidine import across plasma membrane","type":"exact"},{"name":"decreased histidine import during mitotic cell cycle","type":"related"},{"name":"decreased histidine import during vegetative growth","type":"exact"},{"name":"decreased histidine import into cell","type":"exact"},{"name":"decreased histidine uptake","type":"exact"},{"name":"reduced histidine import","type":"exact"}],"termid":"FYPO:0001591"}


id: PBO:0027066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_metabolic_process","termid":"PBO:0027066"}


id: PBO:0072837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein","termid":"PBO:0072837"}


id: FYPO:0005362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is abnormal during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PomBase:mah","GO:1990942","PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic metaphase chromosome recapture","synonyms":[{"name":"abnormal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abnormal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abnormal mitotic kinetochore retrieval","type":"exact"},{"name":"abnormal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abnormal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abnormal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005362"}


id: PBO:0066290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member Q, pseudogene","termid":"PBO:0066290"}


id: PBO:0091548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh1, domesticated transposable element","termid":"PBO:0091548"}


id: GO:0033863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 1,5-diphosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + ADP + H+.","definition_xrefs":["EC:2.7.4.23","RHEA:20109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ribose 1,5-bisphosphate phosphokinase activity","secondary_identifiers":["MetaCyc:RXN0-1401","KEGG_REACTION:R06836"],"synonyms":[{"name":"ATP:ribose-1,5-bisphosphate phosphotransferase activity","type":"related"},{"name":"PhnN","type":"related"},{"name":"ribose 1,5-bisphosphokinase activity","type":"related"}],"termid":"GO:0033863"}


id: PBO:0012853
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWo Spored","termid":"PBO:0012853"}


id: GO:0097145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAK, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAK complex","termid":"GO:0097145"}


id: PBO:0056787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 3 like","termid":"PBO:0056787"}


id: PBO:0033807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telomeric_regions_absent_from_linear_chromosomes","termid":"PBO:0033807"}


id: PBO:0014574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosidase hydrolase family Thirty One","termid":"PBO:0014574"}


id: GO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation.","definition_xrefs":["GOC:add","PMID:15728472","CL:0000623","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell apoptotic process","synonyms":[{"name":"NK cell apoptosis","type":"exact"},{"name":"natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070246"}


id: PBO:0090966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp10","termid":"PBO:0090966"}


id: PBO:0038985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 2B","termid":"PBO:0038985"}


id: GO:1905862
data:
  {"annotated_genes":["SJAG_04677","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88097,76873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of ferroxidase activity.","definition_xrefs":["PMID:16522632","GO_REF:0000088","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04675":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ferroxidase complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:1905862","terms_by_termid":{"GO:0033573":null}}


id: FYPO:0002750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of sulfate ions into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal sulfate import","synonyms":[{"name":"abnormal sulfate import across plasma membrane","type":"exact"},{"name":"abnormal sulfate import during mitotic cell cycle","type":"related"},{"name":"abnormal sulfate import during vegetative growth","type":"exact"},{"name":"abnormal sulfate import into cell","type":"exact"},{"name":"abnormal sulfate ion import","type":"exact"},{"name":"abnormal sulfate uptake","type":"exact"},{"name":"abnormal sulphate import","type":"exact"},{"name":"abnormal sulphate ion import","type":"exact"}],"termid":"FYPO:0002750"}


id: PR:Q9C1W4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0057 membrane protein YqaE that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02628","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.11c","secondary_identifiers":["UniProtKB:Q9C1W4"],"synonyms":[{"name":"Spom972h-yqaE","type":"exact"}],"termid":"PR:Q9C1W4"}


id: PBO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 5","termid":"PBO:0050743"}


id: FYPO:0001171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular pH","synonyms":[{"name":"decreased cellular pH during mitotic cell cycle","type":"related"},{"name":"decreased cellular pH during vegetative growth","type":"exact"},{"name":"decreased cellular pH level","type":"exact"},{"name":"reduced cellular pH","type":"exact"}],"termid":"FYPO:0001171"}


id: PBO:0036248
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ4","termid":"PBO:0036248"}


id: GO:1903762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GO_REF:0000059","PMID:18337493","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","termid":"GO:1903760"},{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"},{"relation_name":"is_a","term_name":"positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential","termid":"GO:1905026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","synonyms":[{"name":"activation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"upregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903762"}


id: FYPO:0000500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitophagy","termid":"FYPO:0007590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitophagy","synonyms":[{"name":"decreased autophagy of mitochondrion","type":"exact"},{"name":"mitophagy: decreased","type":"related"},{"name":"reduced mitophagy","type":"exact"}],"termid":"FYPO:0000500"}


id: PBO:0064106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"praja ring finger ubiquitin ligase 2","termid":"PBO:0064106"}


id: GO:0052764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of glycosidic bonds through a beta-elimination reaction on alginate, a linear polysaccharide consisting of guluronate (G) and mannuronate (M) as the monomer constituents. An oligoalginate is a linear polymer of two, three or four units of (1->4)-alpha-L-guluronic acid and beta-D-mannuronic acid, releasing monosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends.","definition_xrefs":["PMID:20925655","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"exo-oligoalginate lyase activity","secondary_identifiers":["EC:4.2.2.26"],"termid":"GO:0052764"}


id: GO:0004727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prenylated-protein tyrosine phosphate + H2O = prenylated-protein tyrosine + phosphate.","definition_xrefs":["EC:3.1.3.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0004721","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"prenylated protein tyrosine phosphatase activity","termid":"GO:0004727"}


id: GO:0010255
data:
  {"annotated_genes":["SJAG_02481","SJAG_04026","SJAG_02444","SJAG_01245","SJAG_00472","SJAG_02426","SJAG_01699","SJAG_04312","SJAG_00424","SJAG_00574","SJAG_01754","SJAG_03081","SJAG_02311","SJAG_00610","SJAG_00266","SJAG_04551","SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101891,97332,102237,104861,104360,89852,110718,101311,111741],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[95944,111573,88401,87743,103342],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[97623,85186,98307],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The process in which a change in the level of mono- and disaccharide glucose trigger the expression of genes controlling metabolic and developmental processes.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose mediated signaling","termid":"GO:0009757"},{"relation_name":"part_of","term_name":"cellular response to glucose stimulus","termid":"GO:0071333"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"glucose mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucose mediated signalling","type":"exact"}],"termid":"GO:0010255","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: SO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic constant region of an immunoglobulin gene which closely resembles a known functional Imunoglobulin constant gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_C_pseudogene","synonyms":[{"name":"IG C pseudogene","type":"exact"}],"termid":"SO:0002100"}


id: PBO:0057500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 618","termid":"PBO:0057500"}


id: PR:Q9Y7U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7U1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sfk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.01","synonyms":[{"name":"Spom972h-sfk1","type":"exact"}],"termid":"PR:Q9Y7U1"}


id: PBO:0063108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 1","termid":"PBO:0063108"}


id: GO:1901619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule as a result of deprivation of nitrogen.","definition_xrefs":["GOC:TermGenie","PMID:23074192"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA methylation in response to nitrogen starvation (obsolete GO:1901619)","termid":"GO:1901619"}


id: GO:0010187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of seed germination.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed germination","termid":"GO:0010029"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"negatively_regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed germination","synonyms":[{"name":"down regulation of seed germination","type":"exact"},{"name":"down-regulation of seed germination","type":"exact"},{"name":"downregulation of seed germination","type":"exact"},{"name":"inhibition of seed germination","type":"narrow"}],"termid":"GO:0010187"}


id: FYPO:0003138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the ascospore wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"},{"relation_name":"output_of","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0002946","FYPO:0000002","FYPO:0005447","FYPO:0000121"],"is_obsolete":false,"name":"abnormal ascospore wall morphology","synonyms":[{"name":"abnormal spore wall morphology","type":"exact"},{"name":"abnormal spore wall organization","type":"related"}],"termid":"FYPO:0003138"}


id: PBO:0040241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 2A","termid":"PBO:0040241"}


id: PBO:0055583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3019","termid":"PBO:0055583"}


id: PBO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23 (predicted)","termid":"PBO:0001360"}


id: PBO:0071284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 7","termid":"PBO:0071284"}


id: PBO:0047630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGNL1 interacting regulator of recombination and mitosis","termid":"PBO:0047630"}


id: GO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.","definition_xrefs":["RESID:AA0153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxylysine","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxylysine","type":"exact"}],"termid":"GO:0018241"}


id: MOD:00400
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group, with both a gain of oxygen and loss of a nitrogen and a hydrogen.","definition_xrefs":["DeltaMass:32","Unimod:7","OMSSA:4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deamidated residue","synonyms":[{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"Deamidation of Asparagine and Glutamine to Aspartate and Glutamate","type":"exact"},{"name":"dNRes","type":"exact"},{"name":"deamidationkq","type":"exact"}],"termid":"MOD:00400"}


id: PBO:0047363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 17","termid":"PBO:0047363"}


id: GO:0097292
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving XMP, xanthosine monophosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"XMP metabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"XMP metabolism","type":"exact"}],"termid":"GO:0097292","terms_by_termid":{"GO:0032265":null}}


id: PBO:0012048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific PIL domain protein Meu14","termid":"PBO:0012048"}


id: GO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont hormone or growth regulator levels (obsolete GO:0052184)","synonyms":[{"name":"modulation by organism of symbiont hormone or growth regulator levels","type":"exact"}],"termid":"GO:0052184"}


id: PBO:0086452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane glycoprotein; has strong similarity to Vth2p and Pep1p/Vps10p; may be involved in vacuolar protein sorting","termid":"PBO:0086452"}


id: GO:0009559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the two uncellularized polar nuclei cellularize, fuse and acquire the specialized features of a mononucleate diploid central cell.","definition_xrefs":["GOC:jid","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac central cell differentiation","synonyms":[{"name":"embryo sac endosperm mother cell differentiation","type":"exact"},{"name":"female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0009559"}


id: PBO:0059994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 14","termid":"PBO:0059994"}


id: GO:1904379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein localization to cytosolic proteasome complex that is involved in ERAD pathway. Following their retrotranslocation out of the endoplasmic reticulum, protein substrates must be shuttled to the cytosolic proteasome for degradation.","definition_xrefs":["GOC:BHF","PMID:21636303","GOC:nc","GO_REF:0000060","GOC:TermGenie","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to cytosolic proteasome complex involved in ERAD pathway (obsolete GO:1904379)","termid":"GO:1904379"}


id: PBO:0088743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26","termid":"PBO:0088743"}


id: GO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus indicating oxidative stress is received and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxidative stress","termid":"GO:0070994"}


id: PBO:0084174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hippo-like kinase of the Mitotic Exit Network; promotes exit by activating the Dbf2p kinase; component of a non-canonical Hippo pathway with Sps1p required for prospore membrane closure, spindle disassembly and sustained release of Cdc14p during meiotic anaphase II; complexes with Sps1p and contributes to its phosphorylation; phosphorylates the RNAPII CTD during mitosis; localizes to the bud neck and SPB during anaphase and telophase; relocalizes to the cytoplasm upon DNA replication stress","termid":"PBO:0084174"}


id: GO:0004174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + reduced [electron-transfer flavoprotein] = a ubiquinol + H+ + oxidized [electron-transfer flavoprotein].","definition_xrefs":["RHEA:24052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor","termid":"GO:0016649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"electron-transferring-flavoprotein dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-169270","MetaCyc:RXN66-550","EC:1.5.5.1"],"synonyms":[{"name":"ETF dehydrogenase activity","type":"related"},{"name":"ETF-QO activity","type":"related"},{"name":"ETF-ubiquinone oxidoreductase activity","type":"related"},{"name":"ETF:ubiquinone oxidoreductase activity","type":"related"},{"name":"electron transfer flavoprotein Q oxidoreductase activity","type":"related"},{"name":"electron transfer flavoprotein dehydrogenase activity","type":"related"},{"name":"electron transfer flavoprotein reductase activity","type":"related"},{"name":"electron transfer flavoprotein-ubiquinone oxidoreductase activity","type":"related"},{"name":"electron-transferring-flavoprotein:ubiquinone oxidoreductase activity","type":"related"}],"termid":"GO:0004174"}


id: PBO:0062409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 36 pseudogene","termid":"PBO:0062409"}


id: PBO:0066372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 16","termid":"PBO:0066372"}


id: GO:0052013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host macromolecule (obsolete GO:0052013)","synonyms":[{"name":"catabolism by organism of host macromolecule","type":"exact"}],"termid":"GO:0052013"}


id: GO:1902485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-cysteine.","definition_xrefs":["GOC:TermGenie","PMID:12941942","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-cysteine binding","termid":"GO:1902485"}


id: FYPO:0007361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of an ATPase activity does not occur.","definition_xrefs":["PMID:32204793","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished positive regulation of ATPase activity","synonyms":[{"name":"abolished activation of ATPase activity","type":"narrow"},{"name":"abolished positive regulation of ATPase activity during mitotic cell cycle","type":"related"},{"name":"abolished positive regulation of ATPase activity during vegetative growth","type":"exact"},{"name":"positive regulation of ATPase activity abolished","type":"exact"}],"termid":"FYPO:0007361"}


id: PBO:0034079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-member_of","termid":"PBO:0034079"}


id: PBO:0017554
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bypass of Yeast Ras","termid":"PBO:0017554"}


id: PBO:0063458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor subunit A","termid":"PBO:0063458"}


id: GO:0003294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of heart tissue that contributes to the maturation of the connection between an atrium and a ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial ventricular junction remodeling","synonyms":[{"name":"atrial ventricular junction remodelling","type":"exact"},{"name":"atrio-ventricular junction remodeling","type":"related"},{"name":"atrioventricular junction remodeling","type":"exact"}],"termid":"GO:0003294"}


id: GO:1900926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-threonine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"regulates","term_name":"L-threonine import across plasma membrane","termid":"GO:1903807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of L-threonine import across plasma membrane","synonyms":[{"name":"regulation of L-threonine import","type":"broad"},{"name":"regulation of L-threonine uptake","type":"exact"}],"termid":"GO:1900926"}


id: GO:1901874
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:21209915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"negatively_regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-translational protein modification","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"down regulation of PTM","type":"exact"},{"name":"down regulation of post-translational amino acid modification","type":"exact"},{"name":"down regulation of post-translational modification","type":"exact"},{"name":"down regulation of post-translational protein modification","type":"exact"},{"name":"down regulation of posttranslational amino acid modification","type":"exact"},{"name":"down regulation of posttranslational modification","type":"exact"},{"name":"down regulation of posttranslational protein modification","type":"exact"},{"name":"down-regulation of PTM","type":"exact"},{"name":"down-regulation of post-translational amino acid modification","type":"exact"},{"name":"down-regulation of post-translational modification","type":"exact"},{"name":"down-regulation of post-translational protein modification","type":"exact"},{"name":"down-regulation of posttranslational amino acid modification","type":"exact"},{"name":"down-regulation of posttranslational modification","type":"exact"},{"name":"down-regulation of posttranslational protein modification","type":"exact"},{"name":"downregulation of PTM","type":"exact"},{"name":"downregulation of post-translational amino acid modification","type":"exact"},{"name":"downregulation of post-translational modification","type":"exact"},{"name":"downregulation of post-translational protein modification","type":"exact"},{"name":"downregulation of posttranslational amino acid modification","type":"exact"},{"name":"downregulation of posttranslational modification","type":"exact"},{"name":"downregulation of posttranslational protein modification","type":"exact"},{"name":"inhibition of PTM","type":"exact"},{"name":"inhibition of post-translational amino acid modification","type":"exact"},{"name":"inhibition of post-translational modification","type":"exact"},{"name":"inhibition of post-translational protein modification","type":"narrow"},{"name":"inhibition of posttranslational amino acid modification","type":"exact"},{"name":"inhibition of posttranslational modification","type":"exact"},{"name":"inhibition of posttranslational protein modification","type":"exact"},{"name":"negative regulation of PTM","type":"exact"},{"name":"negative regulation of post-translational amino acid modification","type":"exact"},{"name":"negative regulation of post-translational modification","type":"exact"},{"name":"negative regulation of posttranslational amino acid modification","type":"exact"},{"name":"negative regulation of posttranslational modification","type":"exact"},{"name":"negative regulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901874","terms_by_termid":{"GO:0033234":null}}


id: GO:1902704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to acetone.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:19539744","PMID:18727018","GO_REF:0000093"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to acetone (obsolete GO:1902704)","synonyms":[{"name":"hexose breakdown to acetone","type":"exact"},{"name":"hexose catabolic process to 2-propanone","type":"exact"},{"name":"hexose catabolism to acetone","type":"exact"},{"name":"hexose degradation to acetone","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902704"}


id: FYPO:0007108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering takes place during meiotic prophase I, and remains incomplete. Normally, centromeres and SPBs associate during prometaphase I, but not earlier.","definition_xrefs":["PMID:15298676","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic centromere clustering","termid":"FYPO:0004086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0000138"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"abnormal centromere clustering during meiotic prophase I","type":"exact"},{"name":"abnormal chromosome retrieval during meiotic prophase I","type":"related"},{"name":"abnormal kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"abnormal meiotic centromere clustering during prophase I","type":"exact"},{"name":"increased unclustered centromeres during meiotic prophase I","type":"related"},{"name":"premature meiotic centromere clustering during meiotic prophase I","type":"related"}],"termid":"FYPO:0007108"}


id: GO:0002181
data:
  {"annotated_genes":["SJAG_03122","SJAG_04256","SJAG_02121","SJAG_04772","SJAG_04414","SJAG_04160","SJAG_00423","SJAG_03732","SJAG_02749","SJAG_07014","SJAG_05332","SJAG_02043","SJAG_01159","SJAG_04324","SJAG_01659","SJAG_04029","SJAG_00921","SJAG_03545","SJAG_03568","SJAG_03159","SJAG_03971","SJAG_03147","SJAG_00912","SJAG_04204","SJAG_04476","SJAG_00384","SJAG_04900","SJAG_01026","SJAG_02786","SJAG_02601","SJAG_01322","SJAG_00662","SJAG_02738","SJAG_04873","SJAG_03501","SJAG_01797","SJAG_00537","SJAG_02307","SJAG_00069","SJAG_01576","SJAG_04544","SJAG_01942","SJAG_01588","SJAG_03034","SJAG_03326","SJAG_02312","SJAG_00600","SJAG_00653","SJAG_02904","SJAG_02546","SJAG_04085","SJAG_05248","SJAG_04130","SJAG_03094","SJAG_03762","SJAG_01551","SJAG_02493","SJAG_01715","SJAG_01047","SJAG_03425","SJAG_00220","SJAG_02891","SJAG_00420","SJAG_01197","SJAG_04157","SJAG_03919","SJAG_02871","SJAG_03996","SJAG_00338","SJAG_05003","SJAG_04342","SJAG_01087","SJAG_00508","SJAG_03626","SJAG_00488","SJAG_02628","SJAG_00690","SJAG_04291","SJAG_04383","SJAG_02331","SJAG_02207","SJAG_01202","SJAG_01411","SJAG_04248","SJAG_01643","SJAG_01079","SJAG_04304","SJAG_04672","SJAG_02253","SJAG_00103","SJAG_03423","SJAG_02510","SJAG_04478","SJAG_03197","SJAG_00034","SJAG_02224","SJAG_04762","SJAG_02611","SJAG_03335","SJAG_03424","SJAG_04093","SJAG_00748","SJAG_02340","SJAG_01853","SJAG_05000","SJAG_01536","SJAG_01565","SJAG_01954","SJAG_01721","SJAG_02840","SJAG_03364","SJAG_00507","SJAG_04814","SJAG_02263","SJAG_02890","SJAG_00786","SJAG_02184","SJAG_02026","SJAG_03223","SJAG_00898","SJAG_00251","SJAG_02285","SJAG_01226","SJAG_03949","SJAG_02180","SJAG_02802","SJAG_02479","SJAG_02894","SJAG_16454","SJAG_01609","SJAG_04159","SJAG_01259","SJAG_00726","SJAG_02531","SJAG_00466","SJAG_00166","SJAG_03277","SJAG_02723","SJAG_04174","SJAG_04695","SJAG_01248","SJAG_04312","SJAG_04482","SJAG_01194","SJAG_02597","SJAG_01269","SJAG_01568","SJAG_02682","SJAG_06612","SJAG_03433","SJAG_03678","SJAG_02467","SJAG_02081","SJAG_03254","SJAG_04746","SJAG_02803","SJAG_04168","SJAG_01438","SJAG_02017","SJAG_02020","SJAG_03043","SJAG_01132","SJAG_01676","SJAG_04176","SJAG_01287","SJAG_01117","SJAG_01512","SJAG_00749","SJAG_04744","SJAG_00733","SJAG_01365","SJAG_01074","SJAG_07013","SJAG_03127","SJAG_00465","SJAG_04475","SJAG_03422","SJAG_04663","SJAG_01608","SJAG_00468","SJAG_05265","SJAG_01366","SJAG_00523","SJAG_01296","SJAG_01696","SJAG_02376","SJAG_01851","SJAG_02243","SJAG_02861","SJAG_00765","SJAG_00155","SJAG_03262","SJAG_03629","SJAG_02292","SJAG_03859","SJAG_01364","SJAG_01235","SJAG_02164","SJAG_04891","SJAG_01352","SJAG_00169","SJAG_03922","SJAG_03788","SJAG_04626","SJAG_03658","SJAG_03534","SJAG_03133","SJAG_00544","SJAG_02812","SJAG_03869","SJAG_00443","SJAG_02061","SJAG_02335","SJAG_04847","SJAG_02870","SJAG_04066","SJAG_02477","SJAG_02517","SJAG_02390","SJAG_01522","SJAG_03863","SJAG_03666","SJAG_02535","SJAG_02638","SJAG_00940","SJAG_02206","SJAG_02015","SJAG_02283","SJAG_04534","SJAG_01632","SJAG_01128","SJAG_02280","SJAG_02585","SJAG_04981","SJAG_02755","SJAG_02522","SJAG_00541","SJAG_04020","SJAG_01058","SJAG_01387","SJAG_02189","SJAG_04897","SJAG_02592","SJAG_00243","SJAG_00503","SJAG_03472","SJAG_01580","SJAG_04890","SJAG_04188","SJAG_00629","SJAG_01487","SJAG_02046","SJAG_04283","SJAG_03383","SJAG_01548","SJAG_02995","SJAG_02471","SJAG_05216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70498,70514,71163,71936,72195,72298,72959,73071,73241,73301,74194,74687,75340,75576,75806,75932,76239,76457,76627,76890,77174,77177,77190,77194,78430,78712,84912,85123,85343,85630,86046,86722,86723,86724,86743,86744,87042,87267,87846,89164,89165,89264,90373,90653,91033,91172,91500,91931,91932,92154,92413,92414,92585,92658,92746,92786,93013,93014,94211,94212,94709,94710,95172,95173,95309,95310,95556,95557,95953,95969,96411,97052,97053,97175,97176,97936,97937,97950,97951,98578,99308,99313,99558,99559,99877,100103,100484,100615,100779,100836,100837,100961,101086,101087,101094,101095,101327,101495,102103,102104,102602,102665,103250,103287,103288,103727,104638,104877,104878,105311,106042,106043,106396,106397,106694,106695,107471,107472,107653,107654,107897,108358,108359,108678,108679,108680,108740,109161,109162,109262,109263,109288,109437,109438,109713,109714,109759,109760,109783,109784,110254,110386,110387,111616,111750,111751,112052,112551,112556,112575,112731,112732,112777,113074,113371,113372,113793],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[109642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[89355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990762"},{"annotations":[103271,92293,111485,108757,113568,104507,113981,109120,114029,114030,100814,113570,104506,112115,113569,100972,90943,93890,108758,100813,111484,109946,100505,113982,110900,93891],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002182"},{"annotations":[93938,105924,83325,113605,86084,98840,101024,98973,98665,73573,96003,85635,102409,109226,92252,88422,102690,100187,92808],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002183"},{"annotations":[112635,73476,90420,102560,111217,92067,104509,104508],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002184"},{"annotations":[74572,93360,91468,94478,92436,106624,85675,106008,90405,101019,93299,95611],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001732"},{"annotations":[91682,113171,73260,92170,100827,77318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001731"},{"annotations":[94970,97333,91192,113328,110075],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000766"},{"annotations":[107429,86983],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904689"},{"annotations":[110797,72416,89993,70258,94867,88462],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990625"},{"annotations":[102050,70102,112280],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000767"},{"annotations":[95778,91809,106447,107660,85992,96218,111993,112596,98041,91676,105043,100657],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000765"},{"annotations":[99414,90826],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990611"},{"annotations":[74573,73261],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation","termid":"GO:0006412"}],"gene_count":258,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00069":null,"SJAG_00103":null,"SJAG_00155":null,"SJAG_00166":null,"SJAG_00169":null,"SJAG_00220":null,"SJAG_00243":null,"SJAG_00251":null,"SJAG_00338":null,"SJAG_00384":null,"SJAG_00420":null,"SJAG_00423":null,"SJAG_00443":null,"SJAG_00465":null,"SJAG_00466":null,"SJAG_00468":null,"SJAG_00488":null,"SJAG_00503":null,"SJAG_00507":null,"SJAG_00508":null,"SJAG_00523":null,"SJAG_00537":null,"SJAG_00541":null,"SJAG_00544":null,"SJAG_00600":null,"SJAG_00629":null,"SJAG_00653":null,"SJAG_00662":null,"SJAG_00690":null,"SJAG_00726":null,"SJAG_00733":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00765":null,"SJAG_00786":null,"SJAG_00898":null,"SJAG_00912":null,"SJAG_00921":null,"SJAG_00940":null,"SJAG_01026":null,"SJAG_01047":null,"SJAG_01058":null,"SJAG_01074":null,"SJAG_01079":null,"SJAG_01087":null,"SJAG_01117":null,"SJAG_01128":null,"SJAG_01132":null,"SJAG_01159":null,"SJAG_01194":null,"SJAG_01197":null,"SJAG_01202":null,"SJAG_01226":null,"SJAG_01235":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01269":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01322":null,"SJAG_01352":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01366":null,"SJAG_01387":null,"SJAG_01411":null,"SJAG_01438":null,"SJAG_01487":null,"SJAG_01512":null,"SJAG_01522":null,"SJAG_01536":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01565":null,"SJAG_01568":null,"SJAG_01576":null,"SJAG_01580":null,"SJAG_01588":null,"SJAG_01608":null,"SJAG_01609":null,"SJAG_01632":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01676":null,"SJAG_01696":null,"SJAG_01715":null,"SJAG_01721":null,"SJAG_01797":null,"SJAG_01851":null,"SJAG_01853":null,"SJAG_01942":null,"SJAG_01954":null,"SJAG_02015":null,"SJAG_02017":null,"SJAG_02020":null,"SJAG_02026":null,"SJAG_02043":null,"SJAG_02046":null,"SJAG_02061":null,"SJAG_02081":null,"SJAG_02121":null,"SJAG_02164":null,"SJAG_02180":null,"SJAG_02184":null,"SJAG_02189":null,"SJAG_02206":null,"SJAG_02207":null,"SJAG_02224":null,"SJAG_02243":null,"SJAG_02253":null,"SJAG_02263":null,"SJAG_02280":null,"SJAG_02283":null,"SJAG_02285":null,"SJAG_02292":null,"SJAG_02307":null,"SJAG_02312":null,"SJAG_02331":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02467":null,"SJAG_02471":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02493":null,"SJAG_02510":null,"SJAG_02517":null,"SJAG_02522":null,"SJAG_02531":null,"SJAG_02535":null,"SJAG_02546":null,"SJAG_02585":null,"SJAG_02592":null,"SJAG_02597":null,"SJAG_02601":null,"SJAG_02611":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02682":null,"SJAG_02723":null,"SJAG_02738":null,"SJAG_02749":null,"SJAG_02755":null,"SJAG_02786":null,"SJAG_02802":null,"SJAG_02803":null,"SJAG_02812":null,"SJAG_02840":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02871":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_02995":null,"SJAG_03034":null,"SJAG_03043":null,"SJAG_03094":null,"SJAG_03122":null,"SJAG_03127":null,"SJAG_03133":null,"SJAG_03147":null,"SJAG_03159":null,"SJAG_03197":null,"SJAG_03223":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03277":null,"SJAG_03326":null,"SJAG_03335":null,"SJAG_03364":null,"SJAG_03383":null,"SJAG_03422":null,"SJAG_03423":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03433":null,"SJAG_03472":null,"SJAG_03501":null,"SJAG_03534":null,"SJAG_03545":null,"SJAG_03568":null,"SJAG_03626":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03666":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03762":null,"SJAG_03788":null,"SJAG_03859":null,"SJAG_03863":null,"SJAG_03869":null,"SJAG_03919":null,"SJAG_03922":null,"SJAG_03949":null,"SJAG_03971":null,"SJAG_03996":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04066":null,"SJAG_04085":null,"SJAG_04093":null,"SJAG_04130":null,"SJAG_04157":null,"SJAG_04159":null,"SJAG_04160":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04176":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04248":null,"SJAG_04256":null,"SJAG_04283":null,"SJAG_04291":null,"SJAG_04304":null,"SJAG_04312":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04383":null,"SJAG_04414":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04478":null,"SJAG_04482":null,"SJAG_04534":null,"SJAG_04544":null,"SJAG_04626":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04695":null,"SJAG_04744":null,"SJAG_04746":null,"SJAG_04762":null,"SJAG_04772":null,"SJAG_04814":null,"SJAG_04847":null,"SJAG_04873":null,"SJAG_04890":null,"SJAG_04891":null,"SJAG_04897":null,"SJAG_04900":null,"SJAG_04981":null,"SJAG_05000":null,"SJAG_05003":null,"SJAG_05216":null,"SJAG_05248":null,"SJAG_05265":null,"SJAG_05332":null,"SJAG_06612":null,"SJAG_07013":null,"SJAG_07014":null,"SJAG_16454":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic translation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0002181","terms_by_termid":{"GO:0001731":null,"GO:0001732":null,"GO:0002181":null,"GO:0002182":null,"GO:0002183":null,"GO:0002184":null,"GO:0002188":null,"GO:0140708":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:1990762":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null}}


id: PBO:0004098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore protein Ely5","termid":"PBO:0004098"}


id: PBO:0066214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 7","termid":"PBO:0066214"}


id: PR:O14297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.15 gene.","definition_xrefs":["UniProtKB:O14297","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.15","synonyms":[{"name":"Spom972h-SPAC9E9.15","type":"exact"}],"termid":"PR:O14297"}


id: PBO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transmembrane helix","termid":"PBO:0000278"}


id: PBO:0089449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Mca1","termid":"PBO:0089449"}


id: PBO:0078952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-2","termid":"PBO:0078952"}


id: PBO:0062066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 4 pseudogene","termid":"PBO:0062066"}


id: PBO:0040951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 22","termid":"PBO:0040951"}


id: PR:000050524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DASH complex subunit dam1 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-143 of the amino acid sequence represented by UniProtKB:Q9HDZ6. Example: UniProtKB:Q9HDZ6, Ser-143, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:22375062","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","termid":"PR:000050523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dam1/Phos:(S143)","pombase_gene_id":"SPAC589.08c","synonyms":[{"name":"Spom-dam1/Phos:1","type":"exact"},{"name":"UniProtKB:Q9HDZ6, Ser-143, MOD:00046","type":"narrow"},{"name":"dam1/Phos:(S143)","type":"exact"}],"termid":"PR:000050524"}


id: GO:0061585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell in which orexin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion, neurotransmission","termid":"GO:0061544"},{"relation_name":"is_a","term_name":"orexin secretion","termid":"GO:0061584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"orexin secretion, neurotransmission","synonyms":[{"name":"hypocretin secretion, neurotransmission","type":"exact"}],"termid":"GO:0061585"}


id: PBO:0058089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4306","termid":"PBO:0058089"}


id: SO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a located_sequence_feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_attribute","synonyms":[{"name":"feature attribute","type":"exact"}],"termid":"SO:0000733"}


id: GO:1904221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:16120614","GOC:BHF","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of serine C-palmitoyltransferase activity","termid":"GO:1904220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"down-regulation of SPT","type":"related"},{"name":"down regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"down regulation of SPT","type":"related"},{"name":"down regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"down regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"down regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"down-regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"down-regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"down-regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"down-regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"downregulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"downregulation of SPT","type":"related"},{"name":"downregulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"downregulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"downregulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"inhibition of 3-oxosphinganine synthetase activity","type":"narrow"},{"name":"inhibition of SPT","type":"related"},{"name":"inhibition of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"inhibition of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"narrow"},{"name":"inhibition of serine C-palmitoyltransferase activity","type":"narrow"},{"name":"negative regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"negative regulation of SPT","type":"related"},{"name":"negative regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"negative regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"}],"termid":"GO:1904221"}


id: PBO:0005342
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.33","termid":"PBO:0005342"}


id: GO:0052164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts either the host signal transduction pathways leading to the production of reactive oxygen species as part of the host innate immune response.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxidative stress","termid":"GO:0034599"},{"relation_name":"is_a","term_name":"perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont defense to host-produced reactive oxygen species","secondary_identifiers":["GO:0052385","GO:0052550","GO:0052567","GO:0052059","GO:0052303"],"synonyms":[{"name":"evasion by symbiont of cellular damage caused by host oxidative burst","type":"narrow"},{"name":"evasion or tolerance by organism of host-produced reactive oxygen species","type":"exact"},{"name":"evasion or tolerance by organism of reactive oxygen species produced by other organism involved in symbiotic interaction","type":"broad"},{"name":"evasion or tolerance by organism of reactive oxygen species produced during host defense response","type":"exact"},{"name":"evasion or tolerance by symbiont of host-produced reactive oxygen species","type":"exact"},{"name":"evasion or tolerance by symbiont of reactive oxygen species produced by other organism involved in symbiotic interaction","type":"broad"},{"name":"evasion or tolerance of defense-related host metabolic burst","type":"exact"},{"name":"evasion or tolerance of defense-related host oxidative burst","type":"exact"},{"name":"evasion or tolerance of defense-related host respiratory burst","type":"exact"},{"name":"evasion or tolerance of host-produced AOS","type":"exact"},{"name":"evasion or tolerance of host-produced ROIs","type":"exact"},{"name":"evasion or tolerance of host-produced ROS","type":"exact"},{"name":"evasion or tolerance of host-produced active oxygen species","type":"exact"},{"name":"evasion or tolerance of host-produced reactive oxygen intermediates","type":"exact"},{"name":"evasion or tolerance of reactive oxygen species produced by host","type":"exact"},{"name":"modulation by organism of defense-related host AOS production","type":"exact"},{"name":"modulation by organism of defense-related host ROI production","type":"exact"},{"name":"modulation by organism of defense-related host ROS production","type":"exact"},{"name":"modulation by organism of defense-related host active oxygen species production","type":"exact"},{"name":"modulation by organism of defense-related host metabolic burst","type":"exact"},{"name":"modulation by organism of defense-related host oxidative burst","type":"exact"},{"name":"modulation by organism of defense-related host reactive oxidative species production","type":"exact"},{"name":"modulation by organism of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"modulation by organism of defense-related host respiratory burst","type":"exact"},{"name":"modulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"response to defense-related host reactive oxygen species production","type":"related"},{"name":"response to defense-related reactive oxygen species production by other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052164"}


id: PBO:0039436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and death domain containing 1A","termid":"PBO:0039436"}


id: GO:0086002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a cardiac muscle cell and is involved in its contraction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}


id: GO:0030803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030803)","synonyms":[{"name":"down regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"inhibition of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of cyclic nucleotide formation","type":"exact"},{"name":"negative regulation of cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0030803"}


id: PBO:0029659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029659"}


id: GO:1990491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methane from methanol and hydrogen.","definition_xrefs":["PMID:16347126","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis, from methanol","termid":"GO:0019387"},{"relation_name":"is_a","term_name":"hydrogen metabolic process","termid":"GO:1902421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methane biosynthetic process from methanol and hydrogen","synonyms":[{"name":"methane biosynthesis from methanol and hydrogen","type":"exact"},{"name":"methanogenesis from methanol and hydrogen","type":"exact"}],"termid":"GO:1990491"}


id: PBO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 32","termid":"PBO:0072101"}


id: GO:1990414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of a replication-born double-strand DNA break in which the DNA molecule is repaired using the homologous sequence of the sister chromatid which serves as a template to repair the breaks.","definition_xrefs":["PMID:12820977","PMID:16888651","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006281","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"replication-born double-strand break repair via sister chromatid exchange","synonyms":[{"name":"replication-born DSB repair by SCE","type":"exact"}],"termid":"GO:1990414"}


id: GO:1905095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apolipoprotein A-I-mediated signaling pathway.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:bc","PMID:25084135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of apolipoprotein A-I-mediated signaling pathway","termid":"GO:1905094"},{"relation_name":"negatively_regulates","term_name":"apolipoprotein A-I-mediated signaling pathway","termid":"GO:0038027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"down regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"down regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"down-regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"down-regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"downregulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"downregulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"inhibition of apolipoprotein A-I-mediated signaling pathway","type":"narrow"},{"name":"inhibition of apolipoprotein A-I-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:1905095"}


id: FYPO:0007664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"mononucleate monoseptate vegetative cell","type":"exact"},{"name":"mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"monoseptate vegetative cell with mononucleate and anucleate compartments","type":"exact"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"}],"termid":"FYPO:0007664"}


id: PBO:0045168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 2","termid":"PBO:0045168"}


id: PBO:0059857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase domain containing","termid":"PBO:0059857"}


id: PBO:0040878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 3","termid":"PBO:0040878"}


id: GO:0050314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,3-diaminopropane + S-adenosylmethioninamine = S-methyl-5'-thioadenosine + bis(3-aminopropyl)amine + H+.","definition_xrefs":["EC:2.5.1.23","RHEA:23244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"sym-norspermidine synthase activity","secondary_identifiers":["KEGG_REACTION:R03271","MetaCyc:SYM-NORSPERMIDINE-SYNTHASE-RXN"],"synonyms":[{"name":"S-adenosylmethioninamine:propane-1,3-diamine 3-aminopropyltransferase activity","type":"related"}],"termid":"GO:0050314"}


id: PBO:0038808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 12","termid":"PBO:0038808"}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: FYPO:0002457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is elongated, is curved along the long axis, and contains one or more abnormal septa. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable curved vegetative cell with abnormal septum","termid":"FYPO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"viable curved elongated vegetative cell with abnormal septum","synonyms":[{"name":"curved elongated viable cell with abnormal septum","type":"exact"},{"name":"viable curved elongated abnormally septated vegetative cell","type":"exact"},{"name":"viable curved elongated cell with abnormal septum during vegetative growth","type":"exact"},{"name":"viable curved elongated vegetative cell with abnormal septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002457"}


id: PBO:0030811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_meiotic_chromosome_segregation","termid":"PBO:0030811"}


id: PBO:0062850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoancorin","termid":"PBO:0062850"}


id: PR:Q9Y7X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-glucose 4-epimerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03313","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase uge1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.14c","secondary_identifiers":["UniProtKB:Q9Y7X5"],"synonyms":[{"name":"Galactowaldenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GALE","type":"exact"}],"termid":"PR:Q9Y7X5"}


id: GO:0032203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the formation of a telomere at a non-telomeric double-stranded DNA end that involves the activity of a telomerase enzyme.","definition_xrefs":["GOC:ns","GOC:cjm","PMID:11902675","PMID:8622671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere assembly","termid":"GO:0032202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomere formation via telomerase","termid":"GO:0032203"}


id: FYPO:0004434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide. Cells stop growing (and may die) at a concentration of 4-amino-1-methyl-1H-imidazole-5-carboselenoamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:18204818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide","synonyms":[{"name":"hypersensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide","type":"exact"},{"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide during vegetative growth","type":"exact"}],"termid":"FYPO:0004434"}


id: PATO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elevation which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased elevation","synonyms":[{"name":"low elevation","type":"exact"}],"termid":"PATO:0001689"}


id: GO:1900985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vindoline.","definition_xrefs":["PMID:12228585","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"vindoline metabolic process","termid":"GO:1900983"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound biosynthetic process","termid":"GO:1901378"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vindoline biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5292"],"synonyms":[{"name":"vindoline anabolism","type":"exact"},{"name":"vindoline biosynthesis","type":"exact"},{"name":"vindoline formation","type":"exact"},{"name":"vindoline synthesis","type":"exact"}],"termid":"GO:1900985"}


id: PBO:0062602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily N member 1 pseudogene","termid":"PBO:0062602"}


id: PBO:0006169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exists_during","termid":"PBO:0006169"}


id: GO:1905761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SCF ubiquitin ligase complex.","definition_xrefs":["GOC:dph","GOC:ha","GOC:TermGenie","PMID:19723762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex binding","synonyms":[{"name":"CDL1 complex binding","type":"exact"},{"name":"CRL1 complex binding","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex binding","type":"exact"},{"name":"SCF complex binding","type":"exact"},{"name":"SCF complex substrate recognition subunit binding","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex binding","type":"exact"},{"name":"cullin-RING ligase 1 binding","type":"exact"}],"termid":"GO:1905761"}


id: PR:Q9HE02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE02"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.02c","synonyms":[{"name":"Spom972h-med13","type":"exact"},{"name":"mediator complex subunit 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE02"}


id: GO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 36 of histone H3.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K36 methylation (obsolete GO:0000416)","synonyms":[{"name":"activation of histone H3-K36 methylation","type":"narrow"},{"name":"stimulation of histone H3-K36 methylation","type":"narrow"},{"name":"up regulation of histone H3-K36 methylation","type":"exact"},{"name":"up-regulation of histone H3-K36 methylation","type":"exact"},{"name":"upregulation of histone H3-K36 methylation","type":"exact"}],"termid":"GO:0000416"}


id: PATO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's having color.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colored","secondary_identifiers":["PATO:0000332"],"synonyms":[{"name":"pigmented","type":"related"}],"termid":"PATO:0000336"}


id: PATO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's duration which has irregular start and/or end times.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular duration","termid":"PATO:0001417"}


id: PBO:0082418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional HMG aldolase/oxaloacetate decarboxylase; requires divalent metal ions for activity; competitively inhibited by oxalate; forms a ring-shaped homotrimer; similar to members of the prokaryotic RraA family of class II (divalent metal ion dependent) pyruvate aldolases from the meta cleavage pathways of protocatechuate and gallate","termid":"PBO:0082418"}


id: PBO:0055017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2432","termid":"PBO:0055017"}


id: PBO:0003741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp5","termid":"PBO:0003741"}


id: GO:0097541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the axoneme consisting of a highly electron-dense region at the distal end of the ciliary transition zone within the axonemal lumen at which the axonemal central pair of microtubules is connected to the rest of the axonemal structure.","definition_xrefs":["PMID:4554367","GOC:cilia","PMID:23352055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal basal plate","synonyms":[{"name":"axoneme basal plate","type":"exact"},{"name":"basal plate","type":"broad"}],"termid":"GO:0097541"}


id: GO:1990241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that interacts selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. An example of this is STING in E. coli (Q86WV6).","definition_xrefs":["GOC:bhm","PMID:23910378"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide binding complex (obsolete GO:1990241)","synonyms":[{"name":"nucleotide binding complex","type":"exact"}],"termid":"GO:1990241"}


id: GO:0044474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a voltage-gated calcium channel in the bitten organism.","definition_xrefs":["PMID:20920515","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of calcium channel activity in another organism","termid":"GO:0044473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044474"}


id: PBO:0088001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twinfilin; highly conserved actin monomer-sequestering protein involved in regulation of the cortical actin cytoskeleton; coordinates actin filament severing and monomer sequestering at sites of rapid actin turnover; composed of two cofilin-like regions, stimulates actin depolymerization as does the mouse homolog, mTwf1","termid":"PBO:0088001"}


id: PBO:0064668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 3","termid":"PBO:0064668"}


id: GO:0030555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"RNA modification guide activity","termid":"GO:0030555"}


id: GO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of an area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and target cell, which facilitates activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction.","definition_xrefs":["PMID:11244041","PMID:11376330","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"part_of","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunological synapse formation","synonyms":[{"name":"formation of immunological synapse","type":"exact"}],"termid":"GO:0001771"}


id: GO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol into a cell or organelle.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cholesterol import","synonyms":[{"name":"cholesterol uptake","type":"exact"}],"termid":"GO:0070508"}


id: PBO:0065978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA1 related single stranded DNA binding protein, X-linked","termid":"PBO:0065978"}


id: GO:0099621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-deoxy-4-formamido-beta-L-arabinopyranose + ditrans,octacis-undecaprenyl phosphate = UDP + 4-deoxy-4-formamido-alpha-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate.","definition_xrefs":["GOC:al","GOC:dos","PMID:15695810","PMID:11706007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase activity","secondary_identifiers":["EC:2.4.2.53","RHEA:27722","MetaCyc:RXN0-3521","GO:0103019"],"synonyms":[{"name":"Ara4FN transferase activity","type":"exact"},{"name":"undecaprenyl phosphate-L-Ara4FN transferase activity","type":"exact"},{"name":"undecaprenyl-phosphate Ara4FN transferase activity","type":"exact"}],"termid":"GO:0099621"}


id: PBO:0003374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex assembly protein Mim1 (predicted)","termid":"PBO:0003374"}


id: GO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared, as part of an inflammatory response.","definition_xrefs":["PMID:9639571","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue replacement","termid":"GO:0097709"},{"relation_name":"part_of","term_name":"wound healing involved in inflammatory response","termid":"GO:0002246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"connective tissue replacement during inflammatory response","type":"related"},{"name":"fibrosis during inflammatory response","type":"narrow"},{"name":"tissue fibrosis development","type":"narrow"}],"termid":"GO:0002248"}


id: PBO:0003375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR3","termid":"PBO:0003375"}


id: PBO:0043502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP2 antisense RNA 1","termid":"PBO:0043502"}


id: PBO:0044962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7B","termid":"PBO:0044962"}


id: PBO:0079330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17B","termid":"PBO:0079330"}


id: GO:0036472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of interaction between host proteins.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:17297443"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein-protein interaction (obsolete GO:0036472)","synonyms":[{"name":"suppression by virus of host protein binding","type":"exact"},{"name":"suppression by virus of host protein interaction","type":"exact"},{"name":"suppression by virus of host protein:protein binding","type":"exact"},{"name":"suppression by virus of host protein:protein interaction","type":"exact"}],"termid":"GO:0036472"}


id: PR:Q09723
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A multifunctional methyltransferase subunit TRM112-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional methyltransferase subunit trm112 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.02","secondary_identifiers":["UniProtKB:Q09723"],"synonyms":[{"name":"SPAC31A2.02","type":"related"},{"name":"Spom972h-TRMT112","type":"exact"},{"name":"eRF1 MTase subunit trm112 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eRF1 methyltransferase subunit trm112 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methyltransferase 112 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09723"}


id: GO:0047852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: transferrin[Fe2+]2 + NAD+ = transferrin[Fe3+]2 + NADH.","definition_xrefs":["RHEA:13841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diferric-transferrin reductase activity","secondary_identifiers":["MetaCyc:DIFFERIC-TRANSFERRIN-REDUCTASE-RXN","EC:1.16.1.2"],"synonyms":[{"name":"NADH diferric transferrin reductase activity","type":"related"},{"name":"diferric transferrin reductase activity","type":"related"},{"name":"transferrin reductase activity","type":"related"},{"name":"transferrin[Fe(II)]2:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047852"}


id: GO:0019857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-methylcytosine metabolic process","synonyms":[{"name":"5-methylcytosine metabolism","type":"exact"}],"termid":"GO:0019857"}


id: PBO:0016530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Puf Family protein","termid":"PBO:0016530"}


id: GO:0060409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"positively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acetylcholine metabolic process","termid":"GO:0060409"}


id: PBO:0082005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 1","termid":"PBO:0082005"}


id: GO:0046490
data:
  {"annotated_genes":["SJAG_01474","SJAG_04307","SJAG_01187","SJAG_03715","SJAG_03349","SJAG_02380","SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009240"},{"annotations":[110125,76147,78596,73935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[110670,106656],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01474":null,"SJAG_02380":null,"SJAG_03349":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"IPP metabolic process","type":"exact"},{"name":"IPP metabolism","type":"exact"},{"name":"isopentenyl diphosphate metabolism","type":"exact"},{"name":"isopentenyl pyrophosphate metabolic process","type":"exact"},{"name":"isopentenyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0046490","terms_by_termid":{"GO:0009240":null,"GO:0019287":null,"GO:2001211":null}}


id: GO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the cytoplasmic replication fork, which mediates DNA replication. Includes DNA primase, DNA polymerase, DNA helicase, and other proteins.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replisome","termid":"GO:0030894"},{"relation_name":"part_of","term_name":"cytoplasmic replication fork","termid":"GO:0043597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005694"],"is_obsolete":false,"name":"cytoplasmic replisome","synonyms":[{"name":"prokaryotic replisome","type":"exact"}],"termid":"GO:0043600"}


id: PR:O14157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.05c","synonyms":[{"name":"Spom972h-myp2","type":"exact"},{"name":"myosin type II heavy chain 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14157"}


id: GO:0052175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host carbohydrate (obsolete GO:0052175)","termid":"GO:0052175"}


id: PBO:0071194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 35","termid":"PBO:0071194"}


id: GO:0043723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one + H2O = 5-amino-6-(5-phospho-D-ribosylamino)uracil + ammonia.","definition_xrefs":["MetaCyc:RXN-10058","PMID:11889103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase activity","secondary_identifiers":["GO:0017173"],"synonyms":[{"name":"2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase activity","type":"exact"},{"name":"DRAP deaminase activity","type":"exact"}],"termid":"GO:0043723"}


id: GO:0035508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphoprotein phosphatase activity","termid":"GO:0032516"},{"relation_name":"is_a","term_name":"regulation of myosin-light-chain-phosphatase activity","termid":"GO:0035507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myosin-light-chain-phosphatase activity","termid":"GO:0035508"}


id: GO:0060475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin polymerization as part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament polymerization involved in acrosome reaction (obsolete GO:0060475)","synonyms":[{"name":"positive regulation of actin polymerization involved in acrosome reaction","type":"related"}],"termid":"GO:0060475"}


id: PBO:0048118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"furin, paired basic amino acid cleaving enzyme","termid":"PBO:0048118"}


id: PBO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase Fab1","termid":"PBO:0004143"}


id: GO:0042889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of 3-phenylpropionic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-phenylpropionic acid transport (obsolete GO:0042889)","synonyms":[{"name":"3-phenylpropionate transport","type":"exact"},{"name":"HCA transport","type":"exact"},{"name":"hydrocinnamic acid transport","type":"exact"}],"termid":"GO:0042889"}


id: PBO:0063407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 3","termid":"PBO:0063407"}


id: PBO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 6","termid":"PBO:0005689"}


id: PBO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd1/2 complex PHD finger containing protein Phf2","termid":"PBO:0000774"}


id: PBO:0068465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 42, pseudogene","termid":"PBO:0068465"}


id: PBO:0091331
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. nidulans PpzA","termid":"PBO:0091331"}


id: GO:1905355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a spine apparatus.","definition_xrefs":["GO_REF:0000079","GOC:bf","GOC:TermGenie","PMID:12928494","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"spine apparatus assembly","synonyms":[{"name":"dense material assembly","type":"narrow"},{"name":"dense material formation","type":"narrow"},{"name":"spine apparatus formation","type":"exact"}],"termid":"GO:1905355"}


id: PBO:0058985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT6, PHD finger containing","termid":"PBO:0058985"}


id: GO:1905391
data:
  {"annotated_genes":["SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103328],"is_not":false,"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any regulation of protein localization to cell division site that is involved in cell separation after cytokinesis.","definition_xrefs":["GO_REF:0000060","PMID:25411334","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in cell separation after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell division site involved in cell separation after cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cell separation following cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cytokinetic cell separation","type":"related"},{"name":"regulation of protein localisation to cell division site involved in mitotic cytokinetic cell separation","type":"exact"}],"termid":"GO:1905391","terms_by_termid":{"GO:1905391":null}}


id: PBO:0109811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane dislocase Msp1/Yta4","termid":"PBO:0109811"}


id: PBO:0018122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementation functionally complemented by S. cerevisiae VAM7","termid":"PBO:0018122"}


id: GO:0050806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"positively_regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic transmission","synonyms":[{"name":"activation of synaptic transmission","type":"narrow"},{"name":"stimulation of synaptic transmission","type":"narrow"},{"name":"up regulation of synaptic transmission","type":"exact"},{"name":"up-regulation of synaptic transmission","type":"exact"},{"name":"upregulation of synaptic transmission","type":"exact"}],"termid":"GO:0050806"}


id: GO:0050378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate = UDP-alpha-D-galacturonate.","definition_xrefs":["EC:5.1.3.6","RHEA:11404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"UDP-glucuronate 4-epimerase activity","secondary_identifiers":["MetaCyc:PWY-4861","KEGG_REACTION:R01385","MetaCyc:UDP-GLUCURONATE-4-EPIMERASE-RXN"],"synonyms":[{"name":"UDP glucuronic epimerase activity","type":"related"},{"name":"UDP-D-galacturonic acid 4-epimerase activity","type":"related"},{"name":"UDP-galacturonate 4-epimerase activity","type":"related"},{"name":"UDPglucuronate 4-epimerase activity","type":"related"},{"name":"uridine diphospho-D-galacturonic acid","type":"related"},{"name":"uridine diphosphoglucuronate epimerase activity","type":"related"},{"name":"uridine diphosphoglucuronic epimerase activity","type":"related"}],"termid":"GO:0050378"}


id: PBO:0090306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor","termid":"PBO:0090306"}


id: GO:0120208
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Telodendria are projections that originate from the axon pedicle and form gap junctions with other neurons.","definition_xrefs":["PMID:11506430","PMID:29127712","PMID:451992","PMID:20533354","GOC:krc","PMID:11074451","PMID:14755521","PMID:1646866","PMID:8390352","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"telodendria","termid":"GO:0120208"}


id: GO:0046830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of movement of RNA from the cytoplasm into the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"regulation of RNA import into nucleus","termid":"GO:0046828"},{"relation_name":"positively_regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"positive regulation of RNA import into nucleus","synonyms":[{"name":"activation of RNA import into nucleus","type":"narrow"},{"name":"positive regulation of RNA import into cell nucleus","type":"exact"},{"name":"positive regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of RNA-nucleus import","type":"exact"},{"name":"stimulation of RNA import into nucleus","type":"narrow"},{"name":"up regulation of RNA import into nucleus","type":"exact"},{"name":"up-regulation of RNA import into nucleus","type":"exact"},{"name":"upregulation of RNA import into nucleus","type":"exact"}],"termid":"GO:0046830"}


id: GO:1902647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process.","definition_xrefs":["PMID:22562153","GOC:di","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010512"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","termid":"GO:1902646"},{"relation_name":"negatively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","termid":"GO:1902635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","synonyms":[{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"narrow"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"}],"termid":"GO:1902647"}


id: PBO:0004564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2 (predicted)","termid":"PBO:0004564"}


id: PBO:0066397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 1 alpha","termid":"PBO:0066397"}


id: PBO:0068088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 394","termid":"PBO:0068088"}


id: PBO:0004170
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present in a complex with Rlc1 and Cdc15","termid":"PBO:0004170"}


id: GO:1990893
data:
  {"annotated_genes":["SJAG_00646","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83799,106967],"is_not":false,"summary":null,"term":"GO:1990893"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromere chromatin structure is compacted prior to and during mitosis.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"mitotic chromosome centromere condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic chromosome condensation at kinetochore","type":"exact"}],"termid":"GO:1990893","terms_by_termid":{"GO:1990893":null}}


id: GO:0043403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of skeletal muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.","definition_xrefs":["GOC:mtg_muscle","PMID:12021255","PMID:16607119","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue regeneration","synonyms":[{"name":"myofiber turnover","type":"related"}],"termid":"GO:0043403"}


id: PBO:0031591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_process","termid":"PBO:0031591"}


id: GO:0032738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-15 production","termid":"GO:0032658"},{"relation_name":"positively_regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-15 production","secondary_identifiers":["GO:0045374"],"synonyms":[{"name":"activation of interleukin-15 production","type":"narrow"},{"name":"positive regulation of IL-15 production","type":"exact"},{"name":"positive regulation of interleukin-15 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-15 production","type":"narrow"},{"name":"up regulation of interleukin-15 production","type":"exact"},{"name":"up-regulation of interleukin-15 production","type":"exact"},{"name":"upregulation of interleukin-15 production","type":"exact"}],"termid":"GO:0032738"}


id: GO:0099018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont evades the DNA restriction modification system of its host. This process occurs in phages to protein themselves from bacterial restriction enzyme systems. Some viruses encode their own methyltransferase in order to protect their genome from host restriction enzymes. Others directly inhibit restruction enzymes while some use unusual bases in their genome to avoid restriction.","definition_xrefs":["PMID:20348932","VZ:3966","PMID:24123737","PMID:23979432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evasion of host innate immune recognition","termid":"GO:0141043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"evasion of host restriction-modification system","synonyms":[{"name":"evasion by virus of host restriction-modification system","type":"related"},{"name":"restriction-modification system evasion by virus","type":"exact"}],"termid":"GO:0099018"}


id: GO:0120022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the glucagon family peptide hormone (e.g. glucagon, glucagon-like peptides, oxyntomodulin, glicentin, ADCYAP1, GHRH, secretin, VIP, GIP).","definition_xrefs":["PMID:17715056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glucagon family peptide binding","secondary_identifiers":["GO:0120024"],"synonyms":[{"name":"glucagon binding","type":"narrow"},{"name":"glucagon-like peptide binding","type":"narrow"}],"termid":"GO:0120022"}


id: PBO:0068172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 479","termid":"PBO:0068172"}


id: GO:0072357
data:
  {"annotated_genes":["SJAG_04968","SJAG_03126","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93263,107236,111760],"is_not":false,"summary":null,"term":"GO:0072357"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that contains a catalytic subunit (PPP1CA, PPP1CB or PPP1CC) and the regulatory subunits PPP1R10 (PNUTS), TOX4 and WDR82, and plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.","definition_xrefs":["GOC:mah","PMID:20516061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase type 1 complex","termid":"GO:0000164"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PTW/PP1 phosphatase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072357","terms_by_termid":{"GO:0072357":null}}


id: SO:0001389
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified aspartic acid amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_aspartic_acid","secondary_identifiers":["MOD:00904"],"synonyms":[{"name":"ModAsp","type":"exact"},{"name":"modified L aspartic acid","type":"exact"},{"name":"modified L-aspartic acid","type":"exact"}],"termid":"SO:0001389"}


id: PBO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 4","termid":"PBO:0051819"}


id: GO:2000121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of removal of superoxide radicals.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"regulates","term_name":"removal of superoxide radicals","termid":"GO:0019430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"regulation of removal of superoxide radicals","synonyms":[{"name":"regulation of removal of O2-","type":"exact"},{"name":"regulation of removal of oxygen free radicals","type":"exact"}],"termid":"GO:2000121"}


id: FYPO:0006349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at promoter","synonyms":[{"name":"abolished protein localisation to chromatin at promoter during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at promoter element","type":"exact"},{"name":"protein localization to chromatin at promoter abolished","type":"exact"}],"termid":"FYPO:0006349"}


id: GO:1904484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cloacal gland over time, from its formation to the mature structure.","definition_xrefs":["GOC:mr","PMID:18805421","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cloacal gland development","termid":"GO:1904484"}


id: PBO:0082634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Dsc E3 ligase complex in vacuolar membranes; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; YIR014W is a non-essential gene","termid":"PBO:0082634"}


id: GO:0052540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont processes resulting in the thickening of its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont cell wall thickening (obsolete GO:0052540)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont cell wall thickening","type":"exact"},{"name":"positive regulation by organism of symbiont defensive cell wall thickening","type":"exact"}],"termid":"GO:0052540"}


id: PBO:0041922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR4 divergent transcript","termid":"PBO:0041922"}


id: PBO:0094073
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele_variant","termid":"PBO:0094073"}


id: GO:0019243
data:
  {"annotated_genes":["SJAG_02988","SJAG_01596","SJAG_04726","SJAG_04674"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72536,74074,95832,98258],"is_not":false,"summary":null,"term":"GO:0019243"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into D-lactate via the intermediate S-lactoyl-glutathione. Glutathione is used in the first step of the pathway and then regenerated in the second step.","definition_xrefs":["GOC:dph","GOC:ai","PMID:2198020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal catabolic process to lactate","termid":"GO:0061727"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02988":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:PWY-5386"],"synonyms":[{"name":"D-lactate biosynthesis from methylglyoxal","type":"broad"},{"name":"D-lactate biosynthetic process from methylglyoxal","type":"broad"},{"name":"glyoxalase system","type":"related"},{"name":"methylglyoxal breakdown to D-lactate","type":"broad"},{"name":"methylglyoxal catabolism to D-lactate via S-lactoyl-glutathione","type":"exact"},{"name":"methylglyoxal degradation to D-lactate","type":"broad"},{"name":"methylglyoxal detoxification","type":"related"}],"termid":"GO:0019243","terms_by_termid":{"GO:0019243":null}}


id: PBO:0004482
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.-.-","termid":"PBO:0004482"}


id: GO:0035166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stages of blood cell formation that take place after completion of embryonic development.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic hemopoiesis","synonyms":[{"name":"post-embryonic haemopoiesis","type":"exact"}],"termid":"GO:0035166"}


id: GO:0031359
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of chloroplast outer membrane (obsolete GO:0031359)","synonyms":[{"name":"integral to chloroplast outer membrane","type":"narrow"}],"termid":"GO:0031359"}


id: PBO:0034582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_lysed_cell","termid":"PBO:0034582"}


id: GO:1990138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection extension","synonyms":[{"name":"neurite extension","type":"narrow"},{"name":"neuron process extension","type":"exact"},{"name":"neuron protrusion extension","type":"exact"},{"name":"neuronal cell projection extension","type":"exact"}],"termid":"GO:1990138"}


id: PBO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc34","termid":"PBO:0001710"}


id: PBO:0059110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOS proto-oncogene, serine/threonine kinase","termid":"PBO:0059110"}


id: PBO:0054776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2189","termid":"PBO:0054776"}


id: GO:1901296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway involved in heart development","termid":"GO:0003308"},{"relation_name":"is_a","term_name":"negative regulation of canonical Wnt signaling pathway","termid":"GO:0090090"},{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","termid":"GO:1901295"},{"relation_name":"negatively_regulates","term_name":"canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","termid":"GO:0061317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901296"}


id: PBO:0060654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 3","termid":"PBO:0060654"}


id: GO:0150057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 2. Amylin receptor complex 2 (AMY2) also serves as a receptor for adrenomedullin (AM/ADM).","definition_xrefs":["PMID:22500019","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"amylin receptor complex 2","synonyms":[{"name":"AMY2 complex","type":"exact"}],"termid":"GO:0150057"}


id: PBO:0031717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitochondrial_genome_maintenance","termid":"PBO:0031717"}


id: PBO:0076684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 3","termid":"PBO:0076684"}


id: GO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyadipate + NAD+ = 2-oxoadipate + H+ + NADH.","definition_xrefs":["EC:1.1.1.172","RHEA:14793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-oxoadipate reductase activity","secondary_identifiers":["MetaCyc:2-OXOADIPATE-REDUCTASE-RXN","KEGG_REACTION:R01932"],"synonyms":[{"name":"2-hydroxyadipate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"2-ketoadipate reductase activity","type":"related"},{"name":"alpha-ketoadipate reductase activity","type":"related"}],"termid":"GO:0047550"}


id: GO:0004777
data:
  {"annotated_genes":["SJAG_00674","SJAG_03293"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75316,76677],"is_not":false,"summary":null,"term":"GO:0004777"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+.","definition_xrefs":["RHEA:13217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-semialdehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0009013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase (NAD+) activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN","EC:1.2.1.24","Reactome:R-HSA-888548","GO:0008952"],"synonyms":[{"name":"succinate semialdehyde dehydrogenase activity","type":"broad"},{"name":"succinate semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"succinate-semialdehyde dehydrogenase activity","type":"broad"},{"name":"succinate-semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"succinic semialdehyde dehydrogenase activity","type":"broad"},{"name":"succinyl semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004777","terms_by_termid":{"GO:0004777":null}}


id: GO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the haustorium, a projection from a cell or tissue that penetrates the host's cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from haustorium (obsolete GO:0085004)","termid":"GO:0085004"}


id: PBO:0028639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_sister_chromatid_cohesion_during_prophase_I","termid":"PBO:0028639"}


id: PBO:0030076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arginine_import","termid":"PBO:0030076"}


id: PBO:0029762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vacuolated_vegetative_cell","termid":"PBO:0029762"}


id: GO:0061078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell and contributes to the immune response.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of prostaglandin secretion","termid":"GO:0032308"},{"relation_name":"positively_regulates","term_name":"prostaglandin secretion involved in immune response","termid":"GO:0090323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of prostaglandin secretion involved in immune response","synonyms":[{"name":"positive regulation of prostaglandin secretion during immune response","type":"related"}],"termid":"GO:0061078"}


id: PBO:0017661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex biquitin protein ligase E3 subunit Vps11 (predicted)","termid":"PBO:0017661"}


id: GO:2000378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of reactive oxygen species metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"negatively_regulates","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of reactive oxygen species metabolic process","synonyms":[{"name":"negative regulation of ROS metabolic process","type":"exact"},{"name":"negative regulation of reactive oxygen species metabolism","type":"exact"}],"termid":"GO:2000378"}


id: GO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["PMID:6794030","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"pyochelin metabolic process","termid":"GO:0042863"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"pyochelin biosynthetic process","secondary_identifiers":["GO:0031188","GO:0031187"],"synonyms":[{"name":"pyochelin anabolism","type":"exact"},{"name":"pyochelin biosynthesis","type":"exact"},{"name":"pyochelin biosynthetic process, peptide formation","type":"narrow"},{"name":"pyochelin biosynthetic process, peptide modification","type":"narrow"},{"name":"pyochelin formation","type":"exact"},{"name":"pyochelin synthesis","type":"exact"}],"termid":"GO:0042864"}


id: SO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig of BAC reads.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"},{"relation_name":"part_of","term_name":"BAC","termid":"SO:0000153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_read_contig","synonyms":[{"name":"BAC read contig","type":"exact"}],"termid":"SO:0001866"}


id: PR:Q9P6L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set13 gene.","definition_xrefs":["UniProtKB:Q9P6L2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.14","synonyms":[{"name":"SET domain-containing protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set13","type":"exact"}],"termid":"PR:Q9P6L2"}


id: FYPO:0002043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal premeiotic DNA replication","synonyms":[{"name":"abnormal premeiotic DNA synthesis","type":"related"},{"name":"normal meiotic DNA replication","type":"related"},{"name":"normal meiotic DNA synthesis","type":"related"}],"termid":"FYPO:0002043"}


id: PBO:0048432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 3 (gene/pseudogene)","termid":"PBO:0048432"}


id: PBO:0029879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029879"}


id: GO:1902649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GOC:di","GO_REF:0000058","PMID:22199252","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A-H2B dimer displacement (obsolete GO:1902649)","termid":"GO:1902649"}


id: PATO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's separation of normally joined parts, such as the separation of adjacent bones without fracture or of certain abdominal muscles during pregnancy.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"separated from","termid":"PATO:0001505"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diastatic","termid":"PATO:0001506"}


id: PBO:0036497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved calcium-binding protein","termid":"PBO:0036497"}


id: GO:0034473
data:
  {"annotated_genes":["SJAG_04818","SJAG_04084","SJAG_04824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71508,71799,72365],"is_not":false,"summary":null,"term":"GO:0034473"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U1 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04084":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016073","GO:0008150"],"is_obsolete":false,"name":"U1 snRNA 3'-end processing","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"U1 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034473","terms_by_termid":{"GO:0034473":null}}


id: GO:0019692
data:
  {"annotated_genes":["SJAG_03771","SJAG_04665","SJAG_02948","SJAG_04627","SJAG_04657","SJAG_04487","SJAG_00885","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[91091,88082,102642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[94536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[70972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[103735,78343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70973,88084,85129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[70971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[78014,103736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[78012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"deoxyribose phosphate metabolism","type":"exact"}],"termid":"GO:0019692","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null,"GO:0035863":null,"GO:0046081":null}}


id: PBO:0040945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 16","termid":"PBO:0040945"}


id: PBO:0005908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid uptake transporter (predicted)","termid":"PBO:0005908"}


id: PR:O13977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- jmj1 gene.","definition_xrefs":["UniProtKB:O13977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.02","synonyms":[{"name":"Spom972h-jmj1","type":"exact"},{"name":"jumonji domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13977"}


id: PR:Q09883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.12","synonyms":[{"name":"Spom972h-spn6","type":"exact"}],"termid":"PR:Q09883"}


id: PBO:0028332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_sorbitol","termid":"PBO:0028332"}


id: PBO:0063260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 6","termid":"PBO:0063260"}


id: PBO:0038825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 32","termid":"PBO:0038825"}


id: PBO:0030530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0030530"}


id: PR:O74471
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.09c","synonyms":[{"name":"Spom972h-cox13","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74471"}


id: PBO:0035910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5_acetylation_during_vegetative_growth","termid":"PBO:0035910"}


id: PBO:0077220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 1","termid":"PBO:0077220"}


id: MOD:01626
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms L-cystine by forming a disulfide bond that either cross-links two peptidyl L-cysteine residues, or modifies a peptidyl cysteine with a free cysteine.","definition_xrefs":["PubMed:3083866","RESID:AA0025","PubMed:1988019","PubMed:2001356","PubMed:366603","ChEBI:16283","PubMed:7918467","PubMed:2076469","PubMed:8344916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cystine","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cys2","type":"exact"},{"name":"Cystine ((Cys)2)","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:01626"}


id: PBO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 9","termid":"PBO:0072007"}


id: GO:0102187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD(1-) = 4alpha,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3-one + NADH(2-) + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol dehydrogenase/C4-decarboxylase activity (obsolete GO:0102187)","termid":"GO:0102187"}


id: GO:0004262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, and of BZ-Arg-OET > Ac-Tyr-OET. Does not hydrolyze peptide amides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cerevisin activity (obsolete GO:0004262)","synonyms":[{"name":"baker's yeast proteinase B","type":"related"},{"name":"brewer's yeast proteinase","type":"narrow"},{"name":"cerevisin activity","type":"exact"},{"name":"peptidase beta","type":"related"},{"name":"proteinase yscB activity","type":"narrow"},{"name":"yeast proteinase B activity","type":"narrow"}],"termid":"GO:0004262"}


id: SO:0001905
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is transcribed from the outer repeat region of a regional centromere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"regional_centromere_outer_repeat_region","termid":"SO:0001799"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_outer_repeat_transcript","synonyms":[{"name":"centromere outer repeat transcript","type":"exact"},{"name":"regional centromere outer repeat region transcript","type":"exact"},{"name":"regional_centromere_outer_repeat_region_transcript","type":"exact"}],"termid":"SO:0001905"}


id: GO:0072027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the connecting tubule over time, from its formation to the mature structure. The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connecting tubule development","synonyms":[{"name":"connecting duct development","type":"exact"}],"termid":"GO:0072027"}


id: PBO:0077098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8A pseudogene 1","termid":"PBO:0077098"}


id: PBO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU family","termid":"PBO:0001870"}


id: GO:0014076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoxetine stimulus. Fluoxetine increases the extracellular level of the neurotransmitter serotonin by inhibiting its reuptake into the presynaptic cell, increasing the level of serotonin available to bind to the postsynaptic receptor.","definition_xrefs":["GOC:ef","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antidepressant","termid":"GO:0036276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fluoxetine","synonyms":[{"name":"response to SSRI","type":"related"},{"name":"response to selective serotonin reuptake inhibitor","type":"related"}],"termid":"GO:0014076"}


id: GO:0098937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules from the cell body toward the postsynapse in dendrites.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterograde dendritic transport","termid":"GO:0098937"}


id: GO:0046912
data:
  {"annotated_genes":["SJAG_04499","SJAG_04688","SJAG_02841","SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003852"},{"annotations":[73946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004108"},{"annotations":[75545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004410"},{"annotations":[78727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity","termid":"GO:0016746"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01922":null,"SJAG_02841":null,"SJAG_04499":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"acyltransferase activity, acyl groups converted into alkyl on transfer","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:2.3.3.-"],"synonyms":[{"name":"acyltransferase, acyl groups converted into alkyl on transfer","type":"exact"},{"name":"transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer","type":"exact"}],"termid":"GO:0046912","terms_by_termid":{"GO:0003852":null,"GO:0004108":null,"GO:0004410":null,"GO:0004421":null}}


id: GO:0071295
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071295","terms_by_termid":{"GO:0036245":null}}


id: PBO:0027081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_oxidation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027081"}


id: FYPO:0004488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of one or more lysine residues in specific proteins, or at specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein lysine methylation during vegetative growth","synonyms":[{"name":"abolished peptidyl-lysine methylation during vegetative growth","type":"exact"},{"name":"abolished protein acetylation during mitotic cell cycle","type":"related"},{"name":"protein lysine methylation abolished during vegetative growth","type":"exact"},{"name":"protein lysine methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004488"}


id: PBO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit","termid":"PBO:0032743"}


id: PBO:0031132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_upon_G0_to_G1_transition","termid":"PBO:0031132"}


id: PR:Q9UTN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.03","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc14","type":"exact"},{"name":"ubiquitin carrier protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTN8"}


id: PBO:0074800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13E","termid":"PBO:0074800"}


id: GO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of URM1 from one protein to another via the reaction X-URM1 + Y = Y-URM1 + X, where both the X-URM1 and Y-URM1 linkages are thioester bonds between the C-terminal amino acid of URM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"URM1 transferase activity","termid":"GO:0042294"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0019787","GO:0003824","GO:0140096","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"URM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061658"}


id: PBO:0029743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spheroid_cell","termid":"PBO:0029743"}


id: PBO:0073197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin P ligand","termid":"PBO:0073197"}


id: GO:1901479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of benomyl from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transmembrane transporter activity (obsolete GO:1901479)","synonyms":[{"name":"benomyl transporter activity","type":"related"}],"termid":"GO:1901479"}


id: PBO:0082314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase; mitochondrial inner membrane protein; interacts genetically with ATP6","termid":"PBO:0082314"}


id: PBO:0030726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-filamentous_actin_absent","termid":"PBO:0030726"}


id: GO:0003214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the left cardiac ventricle is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle morphogenesis","termid":"GO:0003208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}


id: PBO:0049541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 5","termid":"PBO:0049541"}


id: PBO:0050907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced with helicase C domain 1","termid":"PBO:0050907"}


id: FYPO:0005510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the onset of anaphase of the second meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"meiosis II metaphase/anaphase transition delay","synonyms":[{"name":"delayed cell cycle passage through meiosis II metaphase/anaphase transition","type":"exact"},{"name":"delayed metaphase/anaphase transition of meiosis II","type":"exact"},{"name":"delayed onset of meiotic anaphase II","type":"exact"},{"name":"increased duration of meiosis II metaphase","type":"related"},{"name":"increased duration of metaphase during meiosis II","type":"related"},{"name":"meiotic cell cycle delay at second metaphase/anaphase transition","type":"exact"},{"name":"metaphase/anaphase transition delay during meiosis II","type":"exact"},{"name":"metaphase/anaphase transition delay during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005510"}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: GO:0003726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule.","definition_xrefs":["RHEA:10120","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine deaminase activity","termid":"GO:0004000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"double-stranded RNA adenosine deaminase activity","secondary_identifiers":["Reactome:R-HSA-77614","EC:3.5.4.37","GO:0003971","Reactome:R-HSA-77615"],"synonyms":[{"name":"double-stranded RNA specific editase activity","type":"related"}],"termid":"GO:0003726"}


id: GO:0046599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a daughter centriole of an existing centriole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome duplication","termid":"GO:0010824"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"centriole replication","termid":"GO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of centriole replication","termid":"GO:0046599"}


id: FYPO:0004415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased phosphatase activity","termid":"FYPO:0004415"}


id: GO:0032902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of nerve growth factor (NGF) due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:ecd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nerve growth factor production","synonyms":[{"name":"NGF production","type":"exact"},{"name":"beta-nerve growth factor production","type":"exact"}],"termid":"GO:0032902"}


id: PR:Q9UTI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- moa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTI4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolar attachment protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.07c","synonyms":[{"name":"Spom972h-moa1","type":"exact"},{"name":"meiotically up-regulated gene 159 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI4"}


id: PBO:0061840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8-oxoguanine DNA glycosylase","termid":"PBO:0061840"}


id: PBO:0052569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2D","termid":"PBO:0052569"}


id: PBO:0040761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 1 pseudogene 2","termid":"PBO:0040761"}


id: PBO:0082207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-specific exomannosidase of the endoplasmic reticulum; involved in glycan trimming of both folded and misfolded glycoproteins; complexes with Pdi1p, and trims a mannose from Man8GlcNac2 glycans to generate Man7GlcNac2, an oligosaccharide signal on glycoproteins destined for ER-associated protein degradation; requires Pdi1p for stability and substrate recognition; human homolog EDEM1 can complement yeast null mutant","termid":"PBO:0082207"}


id: PBO:0017569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase Ept1 (predicted)","termid":"PBO:0017569"}


id: PBO:0030859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization","termid":"PBO:0030859"}


id: GO:1990737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of endoplasmic reticulum stress caused by a manganese stimulus.","definition_xrefs":["PMID:23934647","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese-induced endoplasmic reticulum stress","synonyms":[{"name":"manganese-induced ER stress response","type":"exact"},{"name":"response to Mn-induced ER stress","type":"exact"},{"name":"response to manganese-induced ER stress","type":"exact"}],"termid":"GO:1990737"}


id: PR:O94438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S1-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.04c","synonyms":[{"name":"S3aE-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps102","type":"exact"}],"termid":"PR:O94438"}


id: PBO:0043056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin polymerizing factor 2","termid":"PBO:0043056"}


id: _global:has_pathogen
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","secondary_identifiers":["RO:0002557"],"termid":"_global:has_pathogen"}


id: PBO:0034390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_in_by","termid":"PBO:0034390"}


id: PBO:0073570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 3","termid":"PBO:0073570"}


id: PBO:0034489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_reverse_centromeric_outer_repeat_transcript_level","termid":"PBO:0034489"}


id: FYPO:0006816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006816"}


id: PBO:0109081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3105","termid":"PBO:0109081"}


id: PBO:0048570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GGCT pseudogene 3","termid":"PBO:0048570"}


id: FYPO:0006119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in or on actin cables is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to actin cable","synonyms":[{"name":"ectopic protein localization to actin cable","type":"exact"},{"name":"protein mislocalised to actin cable","type":"exact"},{"name":"protein mislocalised to actin cable during vegetative growth","type":"exact"},{"name":"protein mislocalized to actin cable during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actin cable during vegetative growth","type":"exact"},{"name":"protein mislocalized to formin-nucleated actin cable","type":"exact"}],"termid":"FYPO:0006119"}


id: PBO:0041627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 A","termid":"PBO:0041627"}


id: GO:0021757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh","ISBN:0878937420","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudate nucleus development","termid":"GO:0021757"}


id: GO:0102776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + UDP-alpha-D-glucose = anthocyanidin 3,5-di-O-beta-D-glucoside + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-D-glucose:pelargonidin-3-O-beta-D-glucoside 5-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7828"],"termid":"GO:0102776"}


id: PBO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-J-shaped_vegetative_cell","termid":"PBO:0036016"}


id: GO:1902720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining copper ions in an intracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:3099306"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular sequestering of copper ion (obsolete GO:1902720)","synonyms":[{"name":"intracellular sequestering of copper ion","type":"exact"}],"termid":"GO:1902720"}


