# terms

id: PBO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VI (predicted)","termid":"PBO:0001744"}


id: GO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of testicular cells, an organelle derived from the spectrosome.","definition_xrefs":["GOC:dph","GOC:jl","ISBN:0879694238","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"testicular fusome organization","synonyms":[{"name":"testicular fusome organisation","type":"exact"},{"name":"testicular fusome organization and biogenesis","type":"related"}],"termid":"GO:0030724"}


id: PBO:0081480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 355, pseudogene","termid":"PBO:0081480"}


id: GO:1900020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein kinase C activity.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"regulation of protein kinase C activity","termid":"GO:1900019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase C activity","synonyms":[{"name":"positive regulation of PKC","type":"related"},{"name":"positive regulation of PKC activity","type":"exact"},{"name":"up regulation of PKC","type":"related"},{"name":"up regulation of PKC activity","type":"exact"}],"termid":"GO:1900020"}


id: PBO:0027245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5.8S_rRNA_level","termid":"PBO:0027245"}


id: PBO:0043886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element modulator","termid":"PBO:0043886"}


id: PBO:0065046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B","termid":"PBO:0065046"}


id: PBO:0074675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 59B","termid":"PBO:0074675"}


id: PBO:0042348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD83 molecule","termid":"PBO:0042348"}


id: PBO:0053803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1060","termid":"PBO:0053803"}


id: GO:0086055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between a Purkinje myocyte and a ventricular cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte to ventricular cardiac muscle cell communication by electrical coupling","termid":"GO:0086055"}


id: PBO:0049824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain containing 3","termid":"PBO:0049824"}


id: PBO:0088338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase","termid":"PBO:0088338"}


id: _global:regulates_o_results_in_formation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the results_in_formation_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_formation_of","secondary_identifiers":["GOREL:0001025"],"termid":"_global:regulates_o_results_in_formation_of"}


id: GO:0006483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid or asparagine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid/asparagine hydroxylation (obsolete GO:0006483)","synonyms":[{"name":"aspartic acid/asparagine hydroxylation","type":"exact"},{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"exact"}],"termid":"GO:0006483"}


id: PBO:0079027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 10-1","termid":"PBO:0079027"}


id: PBO:0063860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piercer of microtubule wall 2","termid":"PBO:0063860"}


id: GO:0004043
data:
  {"annotated_genes":["SJAG_00869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96707],"is_not":false,"summary":null,"term":"GO:0004043"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate 6-semialdehyde + NADP+ + H2O = L-2-aminoadipate + NADPH + H+.","definition_xrefs":["EC:1.2.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-aminoadipate-semialdehyde dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.2.1.31-RXN","RHEA:12308","Reactome:R-HSA-70941"],"synonyms":[{"name":"2-aminoadipate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-aminoadipic semialdehyde dehydrogenase activity","type":"related"},{"name":"AAR","type":"related"},{"name":"L-2-aminoadipate-6-semialdehyde:NAD(P)+ 6-oxidoreductase","type":"related"},{"name":"L-alpha-aminoadipate delta-semialdehyde oxidoreductase activity","type":"related"},{"name":"L-alpha-aminoadipate delta-semialdehyde:NAD oxidoreductase activity","type":"related"},{"name":"L-alpha-aminoadipate delta-semialdehyde:nicotinamide adenine dinucleotide oxidoreductase activity","type":"related"},{"name":"alpha-aminoadipate reductase activity","type":"related"},{"name":"alpha-aminoadipate-semialdehyde dehydrogenase activity","type":"related"},{"name":"aminoadipate semialdehyde dehydrogenase activity","type":"related"},{"name":"aminoadipate-semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004043","terms_by_termid":{"GO:0004043":null}}


id: GO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + benzoyl-CoA = 4 CoA + 3,5-dihydroxybiphenyl + 4 CO2.","definition_xrefs":["EC:2.3.1.177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"biphenyl synthase activity","secondary_identifiers":["RHEA:22292","MetaCyc:2.3.1.177-RXN"],"synonyms":[{"name":"BIS","type":"related"},{"name":"malonyl-CoA:benzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0033815"}


id: SO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion_artifact","synonyms":[{"name":"deletion artifact","type":"exact"}],"termid":"SO:0002174"}


id: PBO:0086580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant has no detectable phenotype","termid":"PBO:0086580"}


id: GO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of octopamine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"octopamine secretion","termid":"GO:0061539"}


id: FYPO:0001012
data:
  {"alleles_by_uniquename":{"SJAG_03164:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03164","name":"ura4delta","uniquename":"SJAG_03164:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114286],"is_not":false,"summary":null,"term":"FYPO:0001012"}]},"cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize uracil, and therefore requires uracil in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03164":null},"genotype_count":1,"genotypes_by_uniquename":{"ura4delta":{"display_name":"ura4delta","display_uniquename":"ura4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03164:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for uracil","references_by_uniquename":{"PMID:19330769":null},"single_locus_annotated_genes":["SJAG_03164"],"single_locus_genotype_uniquenames":["ura4delta"],"synonyms":[{"name":"growth auxotrophic for uracil during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for uracil during vegetative growth","type":"exact"},{"name":"uracil auxotrophy","type":"exact"}],"termid":"FYPO:0001012","terms_by_termid":{"FYPO:0001012":null}}


id: PBO:0011460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011460"}


id: GO:0031380
data:
  {"annotated_genes":["SJAG_02725","SJAG_03193","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70484,95073,113092],"is_not":false,"summary":null,"term":"GO:0031380"}]},"cv_name":"cellular_component","definition":"A complex required for RNAi mediated heterochromatin assembly. In S. pombe this contains RNA-directed RNA polymerase, a putative helicase and a protein containing a pap25 associated domain.","definition_xrefs":["GOC:vw","PMID:15607976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02725":null,"SJAG_03193":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear RNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"RDRC","type":"exact"},{"name":"Rdr1 complex","type":"narrow"}],"termid":"GO:0031380","terms_by_termid":{"GO:0031380":null}}


id: PBO:0026792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_enfumafungin","termid":"PBO:0026792"}


id: GO:0043046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine that contributes to the establishment of DNA methylation patterns in the gamete.","definition_xrefs":["PMID:12138111","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation involved in gamete generation (obsolete GO:0043046)","synonyms":[{"name":"de novo DNA methylation","type":"related"}],"termid":"GO:0043046"}


id: PBO:0077649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 1","termid":"PBO:0077649"}


id: PBO:0034543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0034543"}


id: PBO:0039888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 5","termid":"PBO:0039888"}


id: FYPO:0005731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal arginase activity","termid":"FYPO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased arginase activity","synonyms":[{"name":"reduced arginase activity","type":"exact"}],"termid":"FYPO:0005731"}


id: PBO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps33","termid":"PBO:0004271"}


id: GO:0009367
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the cleavage of a Gly-Phe bond to release an N-terminal, basic peptide of 5-8 residues from type IV prepilin, and then N-methylates the new N-terminal amino group.","definition_xrefs":["EC:3.4.23.43"],"gene_count":0,"genotype_count":0,"name":"obsolete prepilin peptidase complex (obsolete GO:0009367)","synonyms":[{"name":"prepilin peptidase complex","type":"exact"}],"termid":"GO:0009367"}


id: PATO:0000894
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000894 cytoplasmic sterility value (obsolete PATO:0000894)","termid":"PATO:0000894"}


id: PATO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000779 absolute locomotor activity value (obsolete PATO:0000779)","termid":"PATO:0000779"}


id: FYPO:0005947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing potassium chloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on potassium chloride","synonyms":[{"name":"normal cell population growth in presence of potassium chloride","type":"exact"},{"name":"normal cell population growth on KCl","type":"exact"},{"name":"normal cell population growth on potassium chloride","type":"exact"},{"name":"normal cellular response to potassium chloride","type":"related"},{"name":"normal vegetative cell population growth on potassium chloride","type":"exact"}],"termid":"FYPO:0005947"}


id: GO:0044185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell late endosome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome membrane","termid":"GO:0044175"},{"relation_name":"part_of","term_name":"host cell late endosome","termid":"GO:0044184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome membrane","termid":"GO:0044185"}


id: GO:0140709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling in which Wnt binding to its receptor on the surface a the target cell results in internalization and cleavage of the frizzled receptor to yield a C-terminal fragment that is imported into the nucleus. The frizzled C-terminal fragment is incorporated into large ribonucleoprotein particles and stimulates their egress via nuclear budding.","definition_xrefs":["PMID:22579286","PMID:22510459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Frizzled Nuclear Import pathway","synonyms":[{"name":"FNI","type":"broad"},{"name":"Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140709"}


id: PBO:0067649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 824, pseudogene","termid":"PBO:0067649"}


id: PR:Q09866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein mio that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C12G12.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.01c","secondary_identifiers":["UniProtKB:Q09866"],"synonyms":[{"name":"Spom972h-MIOS","type":"exact"}],"termid":"PR:Q09866"}


id: PBO:0061180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 10-1","termid":"PBO:0061180"}


id: PR:P34069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P34069","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm2","termid":"PR:000025004"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.03","synonyms":[{"name":"Spom972h-mfm2","type":"exact"}],"termid":"PR:P34069"}


id: MOD:00670
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylated residue","synonyms":[{"name":"NAcylRes","type":"exact"}],"termid":"MOD:00670"}


id: PBO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 28","termid":"PBO:0072342"}


id: RO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","termid":"RO:0002333"}


id: PBO:0047791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box E3","termid":"PBO:0047791"}


id: GO:0045101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Glial fibrillary acidic protein forms filaments in the glial cells that surround neurons and in astrocytes.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete glial fibrillary acidic protein (obsolete GO:0045101)","synonyms":[{"name":"GFAP","type":"exact"},{"name":"glial fibrillary acidic protein","type":"exact"}],"termid":"GO:0045101"}


id: PBO:0028281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mating-type_region_heterochromatin","termid":"PBO:0028281"}


id: PBO:0040329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 4","termid":"PBO:0040329"}


id: PBO:0066033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 2","termid":"PBO:0066033"}


id: GO:0140078
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91747],"is_not":false,"summary":null,"term":"GO:0140078"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of an AP site 3' of the baseless site by a beta-lyase mechanism, leaving an unsaturated aldehyde, termed a 3'-(4-hydroxy-5-phospho-2-pentenal) residue, and a 5'-phosphate.","definition_xrefs":["PMID:1698278","RHEA:66592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","termid":"GO:0003906"},{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"class I DNA-(apurinic or apyrimidinic site) endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:AP_endonuclease","EC:4.2.99.18","MetaCyc:4.2.99.18-RXN"],"synonyms":[{"name":"AP endonuclease class I activity","type":"related"},{"name":"AP site-DNA 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"},{"name":"class I DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"}],"termid":"GO:0140078","terms_by_termid":{"GO:0140078":null}}


id: GO:0022884
data:
  {"annotated_genes":["SJAG_04218","SJAG_00175","SJAG_03358","SJAG_01640","SJAG_03415","SJAG_00959","SJAG_03560","SJAG_00373","SJAG_03502","SJAG_02208","SJAG_02330","SJAG_04996","SJAG_02077","SJAG_01879","SJAG_03515","SJAG_05259","SJAG_01597"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101584,93619,73025,73407,73002,70223,73747,77580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[102978,102956,107082,98731,95061,95828,92468,86597,100598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a macromolecule from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00959":null,"SJAG_01597":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"macromolecule transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0022884","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: PR:O42832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent rRNA methyltransferase spb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.11","secondary_identifiers":["UniProtKB:O42832"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-methionine-dependent methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ3","type":"exact"}],"termid":"PR:O42832"}


id: GO:0031588
data:
  {"annotated_genes":["SJAG_03802","SJAG_03501","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70385,111331,113324],"is_not":false,"summary":null,"term":"GO:0031588"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses nucleotide-dependent protein kinase activity. The nucleotide can be AMP (in S. pombe and human) or ADP (in S. cerevisiae).","definition_xrefs":["GOC:vw","GOC:bhm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02785":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nucleotide-activated protein kinase complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"5'-AMP-activated protein kinase complex","type":"narrow"},{"name":"ADP-activated protein kinase complex","type":"narrow"},{"name":"AMP-activated protein kinase complex","type":"narrow"},{"name":"AMPK complex","type":"related"},{"name":"SNF1/AMPK protein kinase complex","type":"narrow"},{"name":"Snf1 kinase complex","type":"narrow"},{"name":"Snf1 serine/threonine protein kinase complex","type":"narrow"}],"termid":"GO:0031588","terms_by_termid":{"GO:0031588":null}}


id: PBO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribitol xylosyltransferase 1","termid":"PBO:0072721"}


id: PBO:0055843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and immunoglobulin like domains 3","termid":"PBO:0055843"}


id: PBO:0043994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 pseudogene 1","termid":"PBO:0043994"}


id: SO:0000720
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element that is foreign.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foreign_transposable_element","synonyms":[{"name":"foreign transposable element","type":"exact"}],"termid":"SO:0000720"}


id: PBO:0089086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane copper transporter complex subunit Ctr5","termid":"PBO:0089086"}


id: PBO:0078320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 2","termid":"PBO:0078320"}


id: GO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a basophil or group of basophils.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"histamine secretion by basophil","termid":"GO:0002557"}


id: RO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"},{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasite_of","synonyms":[{"name":"direct parasite of","type":"exact"}],"termid":"RO:0002444"}


id: GO:0060442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the prostate gland is generated and organized. A branch is a division or offshoot from a main stem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"},{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in prostate gland morphogenesis","synonyms":[{"name":"prostate branching","type":"related"},{"name":"prostate gland branching morphogenesis","type":"exact"}],"termid":"GO:0060442"}


id: GO:0010207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a photosystem II complex on the thylakoid membrane. The photosystem II complex consists of at least 20 polypeptides and around 80 cofactors in most organisms.","definition_xrefs":["GOC:pz","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006091","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"photosystem II assembly","termid":"GO:0010207"}


id: PBO:0069962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1256, pseudogene","termid":"PBO:0069962"}


id: PBO:0046819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA core complex associated protein 20","termid":"PBO:0046819"}


id: GO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antifungal peptide.","definition_xrefs":["PMID:11807545","ISBN:0781735149","GOC:add","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"},{"relation_name":"part_of","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}


id: PBO:0070729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10","termid":"PBO:0070729"}


id: GO:0060190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein desumoylation","termid":"GO:0060188"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein desumoylation","termid":"GO:0060190"}


id: PBO:0047579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 2","termid":"PBO:0047579"}


id: GO:0008440
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74805],"is_not":false,"summary":null,"term":"GO:0008440"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:11020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 3-kinase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-1855153","KEGG_REACTION:R03433","MetaCyc:2.7.1.127-RXN","EC:2.7.1.127","Reactome:R-HSA-1855233"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 3-kinase activity","type":"broad"},{"name":"IP3 3-kinase activity","type":"narrow"},{"name":"IP3K activity","type":"narrow"},{"name":"Ins(1,4,5)P3 3-kinase activity","type":"related"},{"name":"inositol trisphosphate 3-kinase activity","type":"broad"},{"name":"inositol-trisphosphate 3-kinase activity","type":"broad"}],"termid":"GO:0008440","terms_by_termid":{"GO:0008440":null}}


id: GO:1904453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen:potassium-exchanging ATPase activity.","definition_xrefs":["PMID:11897793","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"regulation of potassium:proton exchanging ATPase activity","termid":"GO:1904451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of potassium:proton exchanging ATPase activity","synonyms":[{"name":"activation of (K+ + H+)-ATPase activity","type":"narrow"},{"name":"activation of ATP phosphohydrolase (H+/K+-exchanging)","type":"narrow"},{"name":"activation of H+-K+-ATPase activity","type":"narrow"},{"name":"activation of H+/K(+)-ATPase activity","type":"narrow"},{"name":"activation of H+/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"activation of H+/K+-ATPase activity","type":"narrow"},{"name":"activation of H+/K+-exchanging ATPase activity","type":"narrow"},{"name":"activation of H,K-ATPase activity","type":"narrow"},{"name":"activation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"activation of gastric H+/K+ ATPase","type":"narrow"},{"name":"activation of hydrogen/potassium-exchanging ATPase activity","type":"narrow"},{"name":"activation of hydrogen:potassium exchanging ATPase activity","type":"narrow"},{"name":"activation of hydrogen:potassium-exchanging ATPase activity","type":"narrow"},{"name":"positive regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"positive regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"positive regulation of H+-K+-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of H+/K+-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of H,K-ATPase activity","type":"exact"},{"name":"positive regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"positive regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"positive regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"up regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"up regulation of H+-K+-ATPase activity","type":"exact"},{"name":"up regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"up regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up regulation of H+/K+-ATPase activity","type":"exact"},{"name":"up regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"up regulation of H,K-ATPase activity","type":"exact"},{"name":"up regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"up regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"up regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"up regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"up-regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"up-regulation of H+-K+-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of H+/K+-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of H,K-ATPase activity","type":"exact"},{"name":"up-regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"up-regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"up-regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"upregulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"upregulation of H+-K+-ATPase activity","type":"exact"},{"name":"upregulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"upregulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"upregulation of H+/K+-ATPase activity","type":"exact"},{"name":"upregulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"upregulation of H,K-ATPase activity","type":"exact"},{"name":"upregulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"upregulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"upregulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"upregulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1904453"}


id: PBO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 4","termid":"PBO:0046602"}


id: GO:0032477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex that possesses di-trans,poly-cis-decaprenylcistransferase activity; involved in ubiquinone biosynthesis.","definition_xrefs":["PMID:14519123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decaprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"homodimeric decaprenyl diphosphate synthase complex","termid":"GO:0032477"}


id: GO:0080135
data:
  {"annotated_genes":["SJAG_03568","SJAG_06622","SJAG_05000","SJAG_01253","SJAG_06621","SJAG_03828","SJAG_00573","SJAG_00027","SJAG_03417","SJAG_02183","SJAG_02000","SJAG_04522","SJAG_03048","SJAG_01587","SJAG_01114","SJAG_02945","SJAG_00642","SJAG_02392","SJAG_02682","SJAG_04457","SJAG_06592","SJAG_00823","SJAG_04825","SJAG_02104","SJAG_01150","SJAG_01205","SJAG_02135","SJAG_03263","SJAG_03695","SJAG_03185","SJAG_03160","SJAG_03893","SJAG_03903","SJAG_02013","SJAG_01632","SJAG_00293","SJAG_00318","SJAG_04039","SJAG_00369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113412,102995,91450,94969,99256,102434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[97841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[87329,91572,90644,112236,94971,113413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[101303,86919,106993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[112420,107315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[102788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[113379,104290,104295,90861,104292,104294,104296,104291,107105,107747,104293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[108683,108681,108682,112150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[97863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[85785,105508,101980,89521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006282"},{"annotations":[86611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[104662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cellular response to stress. Cellular response to stress is a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00293":null,"SJAG_00318":null,"SJAG_00369":null,"SJAG_00573":null,"SJAG_00642":null,"SJAG_00823":null,"SJAG_01114":null,"SJAG_01150":null,"SJAG_01205":null,"SJAG_01253":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02104":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02392":null,"SJAG_02682":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03417":null,"SJAG_03568":null,"SJAG_03695":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_04039":null,"SJAG_04457":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0080135","terms_by_termid":{"GO:0006282":null,"GO:0010569":null,"GO:0045739":null,"GO:1900745":null,"GO:1903138":null,"GO:1903753":null,"GO:1904332":null,"GO:1904547":null,"GO:2000639":null,"GO:2000640":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0083812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential RNA-binding G protein effector of mating response pathway; ligand-activated RNA-binding protein that delivers RNAs involved in polarization and perpetualizing mating signal to shmoo tip during pheromone signaling; Scp160p-mediated RNA trafficking essential for chemotropism and successful mating; mainly associated with nuclear envelope and ER, interacts in mRNA-dependent manner with translating ribosomes via multiple KH domains, similar to vertebrate vigilins","termid":"PBO:0083812"}


id: GO:0044597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving daunorubicin, a chemotherapeutic of the anthracycline family that is given as a treatment for some types of cancer.","definition_xrefs":["PMID:20837989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"nitrogen compound metabolic process","termid":"GO:0006807"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"daunorubicin metabolic process","termid":"GO:0044597"}


id: GO:0033424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"CCG codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033424"}


id: PBO:0028796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_rDNA_replication_fork_barrier","termid":"PBO:0028796"}


id: PBO:0012581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription termination factor homolog","termid":"PBO:0012581"}


id: PBO:0060106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 7","termid":"PBO:0060106"}


id: PBO:0091271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L49","termid":"PBO:0091271"}


id: PBO:0050813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis B virus integration site 7","termid":"PBO:0050813"}


id: PBO:0075859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 7","termid":"PBO:0075859"}


id: GO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin production","termid":"GO:0002638"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of isotype switching","synonyms":[{"name":"down regulation of isotype switching","type":"exact"},{"name":"down-regulation of isotype switching","type":"exact"},{"name":"downregulation of isotype switching","type":"exact"},{"name":"inhibition of isotype switching","type":"narrow"},{"name":"negative regulation of class switch recombination","type":"exact"},{"name":"negative regulation of class switching","type":"exact"},{"name":"negative regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045829"}


id: PBO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 5","termid":"PBO:0051934"}


id: GO:0061172
data:
  {"annotated_genes":["SJAG_01373","SJAG_00845","SJAG_04522","SJAG_00317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[99149,102996,107739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061172","terms_by_termid":{"GO:0061173":null,"GO:1904846":null}}


id: GO:2000976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in detection of glucose.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in detection of glucose (obsolete GO:2000976)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in detection of glucose","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose detection","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose perception","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in detection of glucose","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose detection","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in detection of glucose","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose detection","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in detection of glucose","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in detection of glucose","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose detection","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose sensing","type":"related"}],"termid":"GO:2000976"}


id: GO:0019350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of teichoic acid, any polymer occurring in the cell wall, membrane or capsule of Gram-positive bacteria and containing chains of glycerol phosphate or ribitol phosphate residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044281","GO:0044085"],"is_obsolete":false,"name":"teichoic acid biosynthetic process","secondary_identifiers":["MetaCyc:TEICHOICACID-PWY"],"synonyms":[{"name":"teichoic acid anabolism","type":"exact"},{"name":"teichoic acid biosynthesis","type":"exact"},{"name":"teichoic acid formation","type":"exact"},{"name":"teichoic acid synthesis","type":"exact"}],"termid":"GO:0019350"}


id: PBO:0086395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytochrome b5 reductase, localized to the plasma membrane; may be involved in regulation of lifespan; required for maturation of Gas1p and Pho8p, proposed to be involved in protein trafficking; PGA3 has a paralog, AIM33, that arose from the whole genome duplication","termid":"PBO:0086395"}


id: PATO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's pathogenicity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"virulence","termid":"PATO:0002146"}


id: PBO:0062067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 5 pseudogene","termid":"PBO:0062067"}


id: PBO:0083227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR045C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083227"}


id: FYPO:0003857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mevastatin. Cells stop growing (and may die) at a concentration of mevastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to mevastatin","synonyms":[{"name":"hypersensitive to mevastatin","type":"exact"},{"name":"sensitive to compactin","type":"exact"},{"name":"sensitive to mevastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to mevastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0003857"}


id: GO:0070131
data:
  {"annotated_genes":["SJAG_04959","SJAG_01517","SJAG_01249","SJAG_03550"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94254,97395,107927],"is_not":false,"summary":null,"term":"GO:0070131"},{"annotations":[95961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"positively_regulates","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_03550":null,"SJAG_04959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"positive regulation of mitochondrial translation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrial protein anabolism","type":"exact"},{"name":"positive regulation of mitochondrial protein biosynthesis","type":"exact"},{"name":"positive regulation of mitochondrial protein formation","type":"exact"},{"name":"positive regulation of mitochondrial protein synthesis","type":"exact"}],"termid":"GO:0070131","terms_by_termid":{"GO:0070131":null,"GO:0070134":null}}


id: GO:0045177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical part of cell","synonyms":[{"name":"apical region of cell","type":"exact"}],"termid":"GO:0045177"}


id: GO:1905140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18359901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apical ectodermal ridge formation","synonyms":[{"name":"regulation of AER formation","type":"related"},{"name":"regulation of apical epidermal ridge formation","type":"exact"},{"name":"regulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905140"}


id: PBO:0050570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hornerin","termid":"PBO:0050570"}


id: PBO:0066101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASD family member 2","termid":"PBO:0066101"}


id: PBO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin C","termid":"PBO:0044194"}


id: PBO:0033821
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of Rad Wee1","termid":"PBO:0033821"}


id: PATO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of a tissue or organ due to failure to develop.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PATO:0000462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis","termid":"PATO:0002291"}


id: GO:0033707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxymugineic acid + NAD(P)+ = 3''-deamino-3''-oxonicotianamine + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3''-deamino-3''-oxonicotianamine reductase activity","secondary_identifiers":["MetaCyc:1.1.1.285-RXN"],"synonyms":[{"name":"2'-deoxymugineic acid:NAD(P)+ 3''-oxidoreductase activity","type":"related"}],"termid":"GO:0033707"}


id: FYPO:0002489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a spore lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"spore lysis","synonyms":[{"name":"inviable, lysed spore","type":"exact"},{"name":"spore cytolysis","type":"exact"}],"termid":"FYPO:0002489"}


id: null:chado_properties:version
data:
  {"annotation_feature_type":"gene","cv_name":"chado_properties","definition":"Chado schema version","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"version","termid":"null:chado_properties:version"}


id: PBO:0029665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_type_I_activity","termid":"PBO:0029665"}


id: GO:0009460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome containing noncovalently bound protoheme (iron protoporphyrin IX; heme b).","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b (obsolete GO:0009460)","synonyms":[{"name":"cytochrome b","type":"exact"}],"termid":"GO:0009460"}


id: GO:1902234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of positive thymic T cell selection.","definition_xrefs":["GOC:TermGenie","PMID:22080863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation in thymus","termid":"GO:0033089"},{"relation_name":"is_a","term_name":"regulation of positive thymic T cell selection","termid":"GO:1902232"},{"relation_name":"positively_regulates","term_name":"positive thymic T cell selection","termid":"GO:0045059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive thymic T cell selection","synonyms":[{"name":"activation of positive thymic T cell selection","type":"narrow"},{"name":"activation of positive thymic T lymphocyte selection","type":"narrow"},{"name":"activation of positive thymic T-cell selection","type":"narrow"},{"name":"activation of positive thymic T-lymphocyte selection","type":"narrow"},{"name":"positive regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"positive regulation of positive thymic T-cell selection","type":"exact"},{"name":"positive regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"up regulation of positive thymic T cell selection","type":"exact"},{"name":"up regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"up regulation of positive thymic T-cell selection","type":"exact"},{"name":"up regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"up-regulation of positive thymic T cell selection","type":"exact"},{"name":"up-regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"up-regulation of positive thymic T-cell selection","type":"exact"},{"name":"up-regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"upregulation of positive thymic T cell selection","type":"exact"},{"name":"upregulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"upregulation of positive thymic T-cell selection","type":"exact"},{"name":"upregulation of positive thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:1902234"}


id: PBO:0069995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1290, pseudogene","termid":"PBO:0069995"}


id: GO:0051962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"positively_regulates","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nervous system development","synonyms":[{"name":"activation of nervous system development","type":"narrow"},{"name":"stimulation of nervous system development","type":"narrow"},{"name":"up regulation of nervous system development","type":"exact"},{"name":"up-regulation of nervous system development","type":"exact"},{"name":"upregulation of nervous system development","type":"exact"}],"termid":"GO:0051962"}


id: GO:0033501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of an internal steady state of galactose within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose homeostasis (obsolete GO:0033501)","termid":"GO:0033501"}


id: PBO:0072444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 8","termid":"PBO:0072444"}


id: PBO:0003543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp10","termid":"PBO:0003543"}


id: PR:Q9P7J4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mft1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit mft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.11c","synonyms":[{"name":"Spom972h-mft1","type":"exact"}],"termid":"PR:Q9P7J4"}


id: PBO:0041618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 4","termid":"PBO:0041618"}


id: GO:0016644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, disulfide, an iron-sulfur protein, NAD, NADP or oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors (obsolete GO:0016644)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"exact"}],"termid":"GO:0016644"}


id: PBO:0055579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3015","termid":"PBO:0055579"}


id: PBO:0074736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 94","termid":"PBO:0074736"}


id: PBO:0041301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2CD4D and THEM5 antisense RNA 1","termid":"PBO:0041301"}


id: GO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticotropin-releasing hormone stimulus. Corticotropin-releasing hormone is a peptide hormone involved in the stress response.","definition_xrefs":["Wikipedia:Corticotropin-releasing_hormone","PMID:15134857","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticotropin-releasing hormone","synonyms":[{"name":"response to CRF stimulus","type":"exact"},{"name":"response to CRH stimulus","type":"exact"},{"name":"response to corticoliberin stimulus","type":"exact"},{"name":"response to corticotropin-releasing factor stimulus","type":"exact"},{"name":"response to corticotropin-releasing hormone stimulus","type":"exact"}],"termid":"GO:0043435"}


id: FYECO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleate","termid":"FYECO:0000320"}


id: PBO:0052721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 13","termid":"PBO:0052721"}


id: GO:0009579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["ISBN:0198506732","GOC:ds","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid","secondary_identifiers":["Wikipedia:Thylakoid"],"synonyms":[{"name":"photosynthetic membrane","type":"related"}],"termid":"GO:0009579"}


id: GO:0043107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of a bacterial cell which is dependent on the presence of type IV pili. Includes social gliding motility and twitching motility.","definition_xrefs":["PMID:12704238","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV pilus-dependent motility","synonyms":[{"name":"TFP-dependent motility","type":"exact"},{"name":"TFP-dependent movement","type":"exact"},{"name":"social gliding motility","type":"narrow"},{"name":"twitching motility","type":"narrow"},{"name":"type 4 pilus-dependent motility","type":"exact"},{"name":"type four pilus-dependent motility","type":"exact"}],"termid":"GO:0043107"}


id: GO:1903978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglial cell activation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:nc","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"is_a","term_name":"regulation of neuroinflammatory response","termid":"GO:0150077"},{"relation_name":"regulates","term_name":"microglial cell activation","termid":"GO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglial cell activation","termid":"GO:1903978"}


id: PBO:0052892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-3","termid":"PBO:0052892"}


id: GO:1905957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to alcohol.","definition_xrefs":["GO_REF:0000058","PMID:26434723","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to alcohol","termid":"GO:1905957"}


id: PBO:0055503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2937","termid":"PBO:0055503"}


id: PBO:0030146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_caffeine","termid":"PBO:0030146"}


id: PATO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's ability to produce new life or offspring.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reproductive quality","termid":"PATO:0001434"}


id: PBO:0087675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the membrane-associated retromer complex; essential for endosome-to-Golgi retrograde protein transport; peripheral membrane protein that assembles onto the membrane with Vps5p to promote vesicle formation; required for recruiting the retromer complex to the endosome membranes","termid":"PBO:0087675"}


id: GO:0106040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of GABA-A receptor activity","termid":"GO:0106040"}


id: GO:0009188
data:
  {"annotated_genes":["SJAG_00779","SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[78875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[78879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"ribonucleoside diphosphate anabolism","type":"exact"},{"name":"ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside diphosphate formation","type":"exact"},{"name":"ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009188","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0046705":null}}


id: PBO:0011148
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Chinese Hamster Ovary (CHO) L-G1PT","termid":"PBO:0011148"}


id: GO:0099612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to or maintained in a location within an axon.","definition_xrefs":["PMID:26157139","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to axon","termid":"GO:0099612"}


id: PBO:0064276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H2","termid":"PBO:0064276"}


id: PBO:0052418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kirre like nephrin family adhesion molecule 1","termid":"PBO:0052418"}


id: GO:0010686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetracyclic triterpenoid metabolic process","termid":"GO:0010685"},{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetracyclic triterpenoid biosynthetic process","synonyms":[{"name":"tetracyclic triterpenoid biosynthesis","type":"exact"}],"termid":"GO:0010686"}


id: GO:0016862
data:
  {"annotated_genes":["SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043715"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is a keto- or an enol-group, are the same molecule, and no oxidized product appears.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.3.2.-"],"synonyms":[{"name":"intramolecular isomerase activity, interconverting keto- and enol-groups","type":"exact"}],"termid":"GO:0016862","terms_by_termid":{"GO:0043715":null}}


id: PR:O13918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc homeostasis factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.14","secondary_identifiers":["UniProtKB:O13918"],"synonyms":[{"name":"Spom972h-SLC30A1","type":"exact"}],"termid":"PR:O13918"}


id: PBO:0072279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 8","termid":"PBO:0072279"}


id: PBO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036113"}


id: MOD:00782
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to N-acetyl-L-leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-L-leucine","synonyms":[{"name":"AcLeu","type":"exact"}],"termid":"MOD:00782"}


id: PBO:0043901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 1","termid":"PBO:0043901"}


id: PBO:0060236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene like 1","termid":"PBO:0060236"}


id: PBO:0067184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 242, pseudogene","termid":"PBO:0067184"}


id: PBO:0068344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 115","termid":"PBO:0068344"}


id: PBO:0011069
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in metazoa","termid":"PBO:0011069"}


id: PBO:0067508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 648, pseudogene","termid":"PBO:0067508"}


id: PBO:0080159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked","termid":"PBO:0080159"}


id: GO:0044677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisted of eight polypeptides. This complex catalyzes the formation of methyl-coenzyme M and H4MPT from N5-methyl-H4MPT and CoM during methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:8477726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methyl-tetrahydromethanopterin:coenzyme M methyltransferase complex","synonyms":[{"name":"5-methyl-5,6,7,8-tetrahydromethanopterin:2-mercaptoethane sulfonate 2-methyltransferase complex","type":"exact"},{"name":"N5-methyltetrahydromethanopterin-coenzyme M methyltransferase complex","type":"exact"},{"name":"coenzyme M methyltransferase complex","type":"broad"},{"name":"methyl-H4MPT","type":"broad"}],"termid":"GO:0044677"}


id: PBO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 subfamily","termid":"PBO:0001375"}


id: PBO:0083422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YPL034W; YPL035C is not an essential gene","termid":"PBO:0083422"}


id: FYPO:0006874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex at an old growing cell tip is increased.","definition_xrefs":["PMID:17895368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to old growing cell tip","termid":"FYPO:0004362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to cell cortex of old growing cell tip","synonyms":[{"name":"increased protein localisation to cell cortex of old growing cell tip","type":"exact"},{"name":"increased protein localization to cell cortex of old growing cell end","type":"exact"},{"name":"increased protein localization to cell cortex of old growing cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cell cortex of old growing cell tip during vegetative growth","type":"exact"},{"name":"increased protein localization to old growing cell tip cortex","type":"exact"}],"termid":"FYPO:0006874"}


id: PBO:0080445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 2","termid":"PBO:0080445"}


id: PBO:0073130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 2","termid":"PBO:0073130"}


id: GO:1904860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitotic DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:16849602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in mitotic DNA replication","synonyms":[{"name":"DNA anabolism involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA anabolism involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in mitotic DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in mitotic DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1904860"}


id: PBO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 16","termid":"PBO:0071175"}


id: PBO:0074867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 51","termid":"PBO:0074867"}


id: PR:O74986
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA endonuclease ctp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.08","synonyms":[{"name":"SAE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ctp1","type":"exact"},{"name":"double-strand break repair protein ctp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 38 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nbs1-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation in the absence of SPO11 protein 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74986"}


id: PBO:0087307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small (67 amino acids) protein involved in sporulation; localizes to the prospore membrane; phosphorylated during meiosis; a longer, 5'-extended mRNA is also transcribed beginning in mid-meiosis, regulated by two MSEs (middle sporulation elements), and includes an uORF of 15 codons in its 5'-UTR; evidence transcription is regulated by Pdr1p","termid":"PBO:0087307"}


id: GO:1905291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["PMID:22128786","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"positively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"activation of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"activation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"positive regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"upregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"upregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905291"}


id: PBO:0061426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NQO2 antisense RNA 1","termid":"PBO:0061426"}


id: GO:0033181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex found in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"plasma membrane proton-transporting V-type ATPase complex","synonyms":[{"name":"plasma membrane hydrogen ion-transporting ATPase","type":"exact"}],"termid":"GO:0033181"}


id: MOD:01925
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to (2S,5R)-5-hydroxylysine.","definition_xrefs":["ChEBI:18040","PubMed:13375629","RESID:AA0028","PubMed:16101297","PubMed:15504407","PubMed:2857489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,5R)-5-hydroxylysine","synonyms":[{"name":"(2S,5R)-2,6-diamino-5-hydroxyhexanoic acid","type":"exact"},{"name":"(2S,5R)-5-hydroxylysine","type":"exact"},{"name":"2,6-bisazanyl-5-hydroxyhexanoic acid","type":"exact"},{"name":"2,6-diamino-2,3,4,6-tetradeoxyhexonic acid","type":"exact"},{"name":"5-hydroxylated L-lysine","type":"exact"},{"name":"5HyLys","type":"exact"},{"name":"L-erythro-delta-hydroxylysine","type":"exact"},{"name":"MOD_RES (2S,5R)-5-hydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta-hydroxycaproic acid","type":"exact"}],"termid":"MOD:01925"}


id: PBO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-N (predicted)","termid":"PBO:0002165"}


id: PBO:0066585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member B","termid":"PBO:0066585"}


id: GO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cholecystokinin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity. Cholecystokinin can act as a neuropeptide or as a gastrointestinal hormone.","definition_xrefs":["GOC:signaling","PMID:9835394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cholecystokinin receptor activity","synonyms":[{"name":"CCK receptor activity","type":"exact"}],"termid":"GO:0004951"}


id: GO:0009704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The greening response of plants grown in the dark (etiolated) as a result of chloroplast biogenesis and the accumulation of chlorophyll.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"},{"relation_name":"part_of","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"de-etiolation","termid":"GO:0009704"}


id: GO:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of recombination within rDNA repeats (obsolete GO:0000020)","synonyms":[{"name":"negative regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0000020"}


id: GO:1900364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","PMID:15121841","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA 3'-end processing","termid":"GO:0031441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA polyadenylation","synonyms":[{"name":"negative regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900364"}


id: GO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion","termid":"GO:0007160"}


id: PBO:0050148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 4","termid":"PBO:0050148"}


id: GO:0046780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any viral process that inhibits the splicing of host mRNA, thus reducing host protein production.","definition_xrefs":["PMID:19729513","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA splicing","termid":"GO:0033119"},{"relation_name":"is_a","term_name":"suppression by virus of host mRNA processing","termid":"GO:0039524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host mRNA splicing","secondary_identifiers":["GO:0046781"],"synonyms":[{"name":"negative regulation by virus of host mRNA splicing","type":"exact"},{"name":"suppression by virus of host splicing factor activity","type":"exact"},{"name":"viral dispersion of host splicing factors","type":"exact"},{"name":"viral inhibition of host mRNA splicing","type":"exact"}],"termid":"GO:0046780"}


id: SO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is involved in the control of a biological process.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Regulatory_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"regulatory region","type":"exact"}],"termid":"SO:0005836"}


id: PBO:0086065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Msb2p; may play a role in activation of the filamentous growth pathway","termid":"PBO:0086065"}


id: PBO:0004011
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome","termid":"PBO:0004011"}


id: PBO:0090493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA-sterol acyltransferase Are1","termid":"PBO:0090493"}


id: GO:0005929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.","definition_xrefs":["GOC:cilia","PMID:16824949","GOC:vw","GOC:kmv","GOC:curators","PMID:20144998","ISBN:0198547684","PMID:17009929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cilium","secondary_identifiers":["FMA:67181","NIF_Subcellular:sao787716553","GO:0072372","Wikipedia:Cilium"],"synonyms":[{"name":"eukaryotic flagellum","type":"exact"},{"name":"flagellum","type":"related"},{"name":"microtubule-based flagellum","type":"exact"},{"name":"primary cilium","type":"narrow"}],"termid":"GO:0005929"}


id: PBO:0060746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B1 pseudogene 2","termid":"PBO:0060746"}


id: GO:0102588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + malonyl-CoA = cyanidin 3-O-(6-O-malonyl-beta-D-glucoside) + coenzyme A.","definition_xrefs":["EC:2.3.1.171","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 6''-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15335"],"termid":"GO:0102588"}


id: PBO:0089059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 domain subunit G","termid":"PBO:0089059"}


id: GO:1900182
data:
  {"annotated_genes":["SJAG_03048","SJAG_03453","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89998,97860,86548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to nucleus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localisation to nucleus","type":"narrow"},{"name":"activation of protein localization in cell nucleus","type":"narrow"},{"name":"activation of protein localization in nucleus","type":"exact"},{"name":"activation of protein localization to nucleus","type":"narrow"},{"name":"positive regulation of protein localisation to nucleus","type":"exact"},{"name":"positive regulation of protein localization in cell nucleus","type":"exact"},{"name":"positive regulation of protein localization in nucleus","type":"exact"},{"name":"up regulation of protein localisation to nucleus","type":"exact"},{"name":"up regulation of protein localization in cell nucleus","type":"exact"},{"name":"up regulation of protein localization in nucleus","type":"exact"},{"name":"up regulation of protein localization to nucleus","type":"exact"},{"name":"up-regulation of protein localisation to nucleus","type":"exact"},{"name":"up-regulation of protein localization in cell nucleus","type":"exact"},{"name":"up-regulation of protein localization in nucleus","type":"exact"},{"name":"up-regulation of protein localization to nucleus","type":"exact"},{"name":"upregulation of protein localisation to nucleus","type":"exact"},{"name":"upregulation of protein localization in cell nucleus","type":"exact"},{"name":"upregulation of protein localization in nucleus","type":"exact"},{"name":"upregulation of protein localization to nucleus","type":"exact"}],"termid":"GO:1900182","terms_by_termid":{"GO:0042307":null}}


id: FYPO:0007486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle forms with microtubules emanating from only one pole during the second meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0000002","FYPO:0000120","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"monopolar spindle during meiosis II","synonyms":[{"name":"V-shaped spindle during meiosis II","type":"related"},{"name":"fan-shaped spindle during meiosis II","type":"exact"},{"name":"monopolar spindle during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007486"}


id: GO:0071632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Eye, head or whole body movements that help to compensate movements of the environment in order to stabilize its image on the retina. In the case of whole body movements, these motor actions may also stabilize a locomotor course in response to some disturbance. Examples include: the optokinetic reflex, which allows human eyes to follow objects in motion while the head remains stationary reflex; the optomotor responses of flying insects and swimming fish.","definition_xrefs":["GOC:dos","PMID:2469195","PMID:12726833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optokinetic behavior","termid":"GO:0007634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optomotor response","secondary_identifiers":["Wikipedia:Optomotor_response"],"termid":"GO:0071632"}


id: GO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo pheromone-induced unidirectional conjugation, the process involved in desensitization following exposure to pheromone stimulus that acts to down-regulate further stimulation or block initial conjugation responses.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"part_of","term_name":"response to pheromone regulating pheromone-induced unidirectional conjugation","termid":"GO:0000765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative adaptation of signaling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","synonyms":[{"name":"adaptation to pheromone during pheromone-induced unidirectional conjugation","type":"related"},{"name":"desensitization to pheromone during pheromone-induced unidirectional conjugation","type":"exact"},{"name":"negative adaptation of signalling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000766"}


id: PBO:0039696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 2","termid":"PBO:0039696"}


id: GO:0097284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatocyte, the main structural component of the liver.","definition_xrefs":["GOC:jc","GOC:mtg_apoptosis","CL:0000182","PMID:15856020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte apoptotic process","synonyms":[{"name":"hepatocyte apoptosis","type":"narrow"}],"termid":"GO:0097284"}


id: PBO:0073826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 5","termid":"PBO:0073826"}


id: GO:0010916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of very-low-density lipoprotein particle clearance. Very-low-density lipoprotein particle clearance is the process in which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein particle clearance","termid":"GO:0010985"},{"relation_name":"negatively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of very-low-density lipoprotein particle clearance","synonyms":[{"name":"negative regulation of VLDL clearance","type":"exact"},{"name":"negative regulation of VLDL particle clearance","type":"exact"}],"termid":"GO:0010916"}


id: FYPO:0003795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucan level","termid":"FYPO:0001196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cell wall alpha-glucan level","synonyms":[{"name":"normal cell wall alpha-D-glucan level","type":"exact"},{"name":"normal cell wall alpha-glucan accumulation","type":"related"},{"name":"normal cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0003795"}


id: GO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell differentiation","termid":"GO:0045676"}


id: GO:1905486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["PMID:16516839","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior/posterior axon guidance","synonyms":[{"name":"regulation of anterior-posterior axon guidance","type":"exact"},{"name":"regulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905486"}


id: GO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"cGMP dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide-dependent protein kinase activity","termid":"GO:0004690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"cGMP-dependent protein kinase activity","secondary_identifiers":["Reactome:R-HSA-1475422","EC:2.7.11.12","Reactome:R-HSA-1497853","Reactome:R-HSA-418442","Reactome:R-HSA-418549"],"synonyms":[{"name":"3':5'-cyclic GMP-dependent protein kinase activity","type":"related"},{"name":"ATP:protein phosphotransferase (cGMP-dependent) activity","type":"related"},{"name":"PKG","type":"related"},{"name":"PKG 1alpha","type":"related"},{"name":"PKG 1beta","type":"related"},{"name":"PKG II","type":"related"},{"name":"STK23","type":"related"},{"name":"cGMP-dependent protein kinase ibeta activity","type":"related"},{"name":"guanosine 3':5'-cyclic monophosphate-dependent protein kinase activity","type":"related"}],"termid":"GO:0004692"}


id: PBO:0065369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin and Sec7 domain containing 4","termid":"PBO:0065369"}


id: FYPO:0000707
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal molecular function","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0000707","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: PBO:0085886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in invasive and pseudohyphal growth; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085886"}


id: GO:0070469
data:
  {"annotated_genes":["SJAG_03337","SJAG_01077","SJAG_00976","SJAG_07007","SJAG_MIT04","SJAG_MIT20","SJAG_02229","SJAG_03490","SJAG_03920","SJAG_01355","SJAG_02504","SJAG_MIT13","SJAG_MIT03","SJAG_02744","SJAG_01190","SJAG_02646","SJAG_00080","SJAG_01763","SJAG_02398","SJAG_00260","SJAG_01671","SJAG_00601","SJAG_05629","SJAG_01490","SJAG_00755","SJAG_07006"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005746"},{"annotations":[108446,74114,84577,75235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005749"},{"annotations":[74975,113263,114124,99531,85703,110311,112812,108647,103331],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005750"},{"annotations":[72049,103641,109880,114120,84973,73765,83983,109460,114099,110646,114143],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005751"},{"annotations":[102556],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045277"}]},"cv_name":"cellular_component","definition":"The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["Wikipedia:Respirasome","ISBN:0198547684","GOC:ecd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02229":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"respirasome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"membrane electron transport chain","type":"exact"},{"name":"respiratory chain","type":"exact"}],"termid":"GO:0070469","terms_by_termid":{"GO:0005746":null,"GO:0005749":null,"GO:0005750":null,"GO:0005751":null,"GO:0045277":null}}


id: PBO:0013769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EXOC1","termid":"PBO:0013769"}


id: PBO:0059361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 7","termid":"PBO:0059361"}


id: PBO:0049694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin associated protein 1","termid":"PBO:0049694"}


id: PBO:0029620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029620"}


id: FYPO:0000125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amiloride than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to amiloride","synonyms":[{"name":"resistance to amiloride during mitotic cell cycle","type":"related"},{"name":"resistance to amiloride during vegetative growth","type":"exact"},{"name":"resistant to amiloride","type":"exact"}],"termid":"FYPO:0000125"}


id: GO:1904566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-oleoyl-sn-glycerol 3-phosphate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:12139919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to 1-oleoyl-sn-glycerol 3-phosphate","termid":"GO:1904565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 1-oleoyl-sn-glycerol 3-phosphate","synonyms":[{"name":"cellular response to 1-oleoyl lysophosphatidic acid","type":"exact"},{"name":"cellular response to LPA","type":"exact"},{"name":"cellular response to lysophosphatidic acid","type":"exact"},{"name":"cellular response to oleoyl lysophosphatidic acid","type":"exact"},{"name":"cellular response to oleoyl-L-alpha-lysophosphatidic acid","type":"exact"}],"termid":"GO:1904566"}


id: GO:0051892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"is_a","term_name":"negative regulation of stem cell differentiation","termid":"GO:2000737"},{"relation_name":"negatively_regulates","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast differentiation","synonyms":[{"name":"down regulation of cardioblast differentiation","type":"exact"},{"name":"down-regulation of cardioblast differentiation","type":"exact"},{"name":"downregulation of cardioblast differentiation","type":"exact"},{"name":"inhibition of cardioblast differentiation","type":"narrow"}],"termid":"GO:0051892"}


id: GO:1903893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:22013210","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of ATF6-mediated unfolded protein response","termid":"GO:1903891"},{"relation_name":"positively_regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"activation of ATF6 branch of UPR","type":"narrow"},{"name":"activation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of ATF6-alpha UPR branch","type":"narrow"},{"name":"activation of ATF6-beta UPR branch","type":"narrow"},{"name":"activation of ATF6-mediated unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by ATF6 stress sensor","type":"narrow"},{"name":"activation of activating transcription factor 6 signaling in unfolded protein response","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"narrow"},{"name":"positive regulation of ATF6 branch of UPR","type":"exact"},{"name":"positive regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"positive regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"positive regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"positive regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up regulation of ATF6 branch of UPR","type":"exact"},{"name":"up regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up-regulation of ATF6 branch of UPR","type":"exact"},{"name":"up-regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up-regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"upregulation of ATF6 branch of UPR","type":"exact"},{"name":"upregulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"upregulation of ATF6-beta UPR branch","type":"narrow"},{"name":"upregulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"upregulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"upregulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903893"}


id: FYPO:0001339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to starvation for one or more nutrients is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation","termid":"FYPO:0000713"},{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to starvation during vegetative growth","synonyms":[{"name":"abnormal cellular response to depletion during vegetative growth","type":"exact"},{"name":"abnormal cellular response to deprivation during vegetative growth","type":"exact"},{"name":"abnormal cellular response to starvation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001339"}


id: PBO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_cortex_of_cell_tip","termid":"PBO:0036051"}


id: GO:0098653
data:
  {"annotated_genes":["SJAG_01745","SJAG_05196","SJAG_02814","SJAG_02624","SJAG_04076","SJAG_01613","SJAG_02737","SJAG_03540","SJAG_01805","SJAG_00794","SJAG_03683","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112105,87016,98281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[95892,111112,97909,94760,113752,113249,104490,89437,90915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores become localized to clusters.","definition_xrefs":["GOC:dos","PMID:23283988","PMID:8486732","PMID:10761928","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"is_a","term_name":"centromere localization","termid":"GO:0072765"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098587"],"synonyms":[{"name":"kinetochore clustering","type":"exact"}],"termid":"GO:0098653","terms_by_termid":{"GO:0072766":null,"GO:1990571":null}}


id: GO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the anatomical structures of the compound eye are generated and organized. The adult compound eye is a precise assembly of 700-800 ommatidia. Each ommatidium is composed of 20 cells, identified by cell type and position. An example of compound eye morphogenesis is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye morphogenesis","synonyms":[{"name":"insect-type retina morphogenesis","type":"exact"}],"termid":"GO:0001745"}


id: PBO:0090329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10, low frequency splice site, possible frameshifted","termid":"PBO:0090329"}


id: SO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non directional promoter motif with consensus sequence GAAAGCT.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDM3_motif","synonyms":[{"name":"NDM3","type":"exact"},{"name":"NDM3 motif","type":"exact"},{"name":"non directional motif 3","type":"exact"}],"termid":"SO:0001168"}


id: PBO:0053405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 336","termid":"PBO:0053405"}


id: PBO:0084788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; forms heterodimer complex with Mss1p that performs 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; required for respiration in paromomycin-resistant 15S rRNA mutants; human homolog MTO1 can complement yeast null mutant","termid":"PBO:0084788"}


id: PBO:0041424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 putative open reading frame 44","termid":"PBO:0041424"}


id: PBO:0050704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 1 pseudogene 2","termid":"PBO:0050704"}


id: PBO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 35","termid":"PBO:0071532"}


id: GO:0015624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ferric-enterobactin(out) = ADP + phosphate + ferric-enterobactin(in).","definition_xrefs":["RHEA:58492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type ferric-enterobactin transporter activity","secondary_identifiers":["EC:7.2.2.17","MetaCyc:ABC-10-RXN"],"synonyms":[{"name":"ATP-dependent ferric-enterobactin transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled ferric-enterobactin transmembrane transporter activity","type":"related"},{"name":"ferric-enterobactin ABC transporter","type":"exact"},{"name":"ferric-enterobactin porter activity","type":"broad"},{"name":"ferric-enterobactin-transporting ATPase activity","type":"related"}],"termid":"GO:0015624"}


id: PBO:0077614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 5","termid":"PBO:0077614"}


id: PBO:0028621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U2-type_prespliceosome_assembly","termid":"PBO:0028621"}


id: PBO:0054555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1956","termid":"PBO:0054555"}


id: PBO:0039411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC15 pseudogene 1","termid":"PBO:0039411"}


id: GO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch3 (ICN3), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN3 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch3 complex","type":"exact"}],"termid":"GO:0071181"}


id: GO:2000223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in heart jogging.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in heart jogging (obsolete GO:2000223)","synonyms":[{"name":"regulation of BMP signalling pathway involved in heart jogging pathway involved in somitogenesis","type":"exact"}],"termid":"GO:2000223"}


id: GO:1902563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil activation.","definition_xrefs":["GOC:TermGenie","PMID:17588661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil activation","termid":"GO:1902563"}


id: PBO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki2","termid":"PBO:0003410"}


id: GO:0045094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to beta subunit of interleukin-18. IL-18b is a ligand non-binding chain and is required for signaling of IL-18 that binds with IL-18a.","definition_xrefs":["PMID:10653850"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-18 beta subunit binding (obsolete GO:0045094)","synonyms":[{"name":"IL-18Rb binding","type":"exact"}],"termid":"GO:0045094"}


id: PBO:0077707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNNI3 interacting kinase","termid":"PBO:0077707"}


id: PBO:0018278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Pci2 (predicted)","termid":"PBO:0018278"}


id: PBO:0065850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 1 pseudogene 1","termid":"PBO:0065850"}


id: PBO:0064472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 3, accessory subunit","termid":"PBO:0064472"}


id: PBO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin exportin T Los1 (predicted)","termid":"PBO:0004600"}


id: GO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that positively regulates gene expression by demethylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide and are often associated with the transcription start site of genes.","definition_xrefs":["GOC:jl","PMID:36150101","Wikipedia:Cpg_island"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression, epigenetic","termid":"GO:0141137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"positive regulation of gene expression via CpG island demethylation","synonyms":[{"name":"DNA demethylation","type":"broad"},{"name":"DNA hypomethylation of CpG island","type":"exact"},{"name":"hypomethylation of CpG island","type":"exact"}],"termid":"GO:0044029"}


id: PATO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular shape quality inhering in a bearer by virtue of the bearer's having two angles in its length giving the bearer the form of the letter W.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angular","termid":"PATO:0001977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"w-shaped","termid":"PATO:0002439"}


id: GO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart jogging (obsolete GO:0003303)","synonyms":[{"name":"BMP signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0003303"}


id: GO:0019960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X3-C chemokine; C-X3-C chemokines have three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"C-X3-C chemokine binding","termid":"GO:0019960"}


id: FYPO:0001828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of guanine into the cell does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucose import","termid":"FYPO:0001827"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished glucose import","synonyms":[{"name":"abolished glucose import across plasma membrane","type":"exact"},{"name":"abolished glucose import during mitotic cell cycle","type":"related"},{"name":"abolished glucose import during vegetative growth","type":"exact"},{"name":"abolished glucose import into cell","type":"exact"},{"name":"abolished glucose uptake","type":"exact"},{"name":"glucose import abolished","type":"exact"}],"termid":"FYPO:0001828"}


id: PBO:0066960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 262","termid":"PBO:0066960"}


id: PBO:0088769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator complex subunit Bur6","termid":"PBO:0088769"}


id: PBO:0058819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7976","termid":"PBO:0058819"}


id: FYPO:0004544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is longer than normal. Heterochromatin maintenance is the process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["PomBase:mah","GO:0070829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of heterochromatin maintenance","synonyms":[{"name":"increased duration of heterochromatin maintenance during mitotic cell cycle","type":"related"},{"name":"increased duration of heterochromatin maintenance during vegetative growth","type":"exact"},{"name":"prolonged heterochromatin maintenance","type":"exact"}],"termid":"FYPO:0004544"}


id: PBO:0017535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lgl family protein Sro7 (predicted)","termid":"PBO:0017535"}


id: PBO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.17","termid":"PBO:0002459"}


id: PBO:0042713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell migration inducing hyaluronidase 1","termid":"PBO:0042713"}


id: PBO:0089054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2","termid":"PBO:0089054"}


id: PBO:0027391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027391"}


id: GO:0045489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues.","definition_xrefs":["PMID:11931668","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pectin biosynthetic process","synonyms":[{"name":"pectin anabolism","type":"exact"},{"name":"pectin biosynthesis","type":"exact"},{"name":"pectin formation","type":"exact"},{"name":"pectin synthesis","type":"exact"}],"termid":"GO:0045489"}


id: PBO:0091876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular acid phosphatase Pho1","termid":"PBO:0091876"}


id: PBO:0063583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET100 cytochrome c oxidase chaperone","termid":"PBO:0063583"}


id: GO:1990622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of CHOP (C/EBP homology protein, GADD153) and ATF3 (activating transcription factor 3) subunits.","definition_xrefs":["GOC:PARL","PMID:8622660","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"CHOP-ATF3 complex","synonyms":[{"name":"ATF3-CHOP complex","type":"exact"},{"name":"CHOP-ATF3 heterodimer","type":"exact"},{"name":"CHOP-ATF3 heterodimeric complex","type":"exact"},{"name":"GADD153-ATF3 complex","type":"exact"}],"termid":"GO:1990622"}


id: PBO:0108933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MND1 pseudogene 1","termid":"PBO:0108933"}


id: GO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gas transport","termid":"GO:0015669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"oxygen transport","termid":"GO:0015671"}


id: PATO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001111 relative density value (obsolete PATO:0001111)","termid":"PATO:0001111"}


id: FYPO:0002395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin at centromere outer repeat","termid":"FYPO:0002386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"abnormal maintenance of protein localization to heterochromatin at centromere otr","type":"exact"},{"name":"abnormal maintenance of protein localization to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"abnormal maintenance of protein localization to heterochromatin at pericentric region","type":"related"},{"name":"abnormal maintenance of protein localization to heterochromatin at pericentromeric region","type":"related"},{"name":"decreased maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced maintenance of protein localization to heterochromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0002395"}


id: PBO:0003945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 gamma subunit (predicted)","termid":"PBO:0003945"}


id: GO:0052357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall pectin (obsolete GO:0052357)","termid":"GO:0052357"}


id: PBO:0066708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 5","termid":"PBO:0066708"}


id: PBO:0057749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1908","termid":"PBO:0057749"}


id: FYPO:0001838
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114585,114589],"is_not":false,"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001838","terms_by_termid":{"FYPO:0001838":null}}


id: PBO:0070167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 81 pseudogene","termid":"PBO:0070167"}


id: PBO:0085270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal cystathionine beta-lyase; converts cystathionine into homocysteine; may be redox regulated by Gto1p; involved in the release of the aromatic thiol 3-mercaptohexanol during wine fermentation","termid":"PBO:0085270"}


id: PBO:0072714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 1","termid":"PBO:0072714"}


id: PBO:0050837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0050837"}


id: GO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels.","definition_xrefs":["PMID:8974333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor activity","termid":"GO:0016917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"GABA-A receptor activity","synonyms":[{"name":"ionotropic GABA receptor activity","type":"exact"}],"termid":"GO:0004890"}


id: PBO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein (predicted)","termid":"PBO:0005817"}


id: PBO:0000828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0000828"}


id: GO:0050070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine = 2-acyl-sn-glycero-3-phosphocholine.","definition_xrefs":["EC:5.4.1.1","RHEA:24356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysolecithin acylmutase activity","secondary_identifiers":["MetaCyc:LYSOLECITHIN-ACYLMUTASE-RXN","KEGG_REACTION:R03334"],"synonyms":[{"name":"lysolecithin 2,3-acylmutase activity","type":"related"},{"name":"lysolecithin migratase activity","type":"related"}],"termid":"GO:0050070"}


id: GO:0009789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of abscisic acid (ABA) signaling.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid-activated signaling pathway","termid":"GO:0009787"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of abscisic acid-activated signaling pathway","synonyms":[{"name":"activation of abscisic acid mediated signaling","type":"narrow"},{"name":"positive regulation of abscisic acid mediated signaling pathway","type":"related"},{"name":"positive regulation of abscisic acid mediated signalling","type":"exact"},{"name":"stimulation of abscisic acid mediated signaling","type":"narrow"},{"name":"up regulation of abscisic acid mediated signaling","type":"exact"},{"name":"up-regulation of abscisic acid mediated signaling","type":"exact"},{"name":"upregulation of abscisic acid mediated signaling","type":"exact"}],"termid":"GO:0009789"}


id: GO:0033282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex of protein C inhibitor (SERPINA5) and acrosin; formation of the complex inhibits the protease activity of acrosin.","definition_xrefs":["PMID:11120760","PMID:7521127","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0031410","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-acrosin complex","synonyms":[{"name":"PCI-ACR complex","type":"exact"},{"name":"PCI-acrosin complex","type":"exact"},{"name":"SERPINA5-acrosin complex","type":"exact"},{"name":"plasma serine protease inhibitor-acrosin complex","type":"exact"},{"name":"serpin A5-acrosin complex","type":"exact"}],"termid":"GO:0033282"}


id: PBO:0086833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to helicases; located in the telomere region on the right arm of chromosome VIII","termid":"PBO:0086833"}


id: GO:2000522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of immunological synapse formation","termid":"GO:2000520"},{"relation_name":"positively_regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunological synapse formation","synonyms":[{"name":"positive regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000522"}


id: PBO:0053959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1266","termid":"PBO:0053959"}


id: PBO:0091214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, SPAC212.12 antisense","termid":"PBO:0091214"}


id: PR:O14342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cactin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.12c","secondary_identifiers":["UniProtKB:O14342"],"synonyms":[{"name":"Spom972h-CACTIN","type":"exact"}],"termid":"PR:O14342"}


id: PBO:0047195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member C, pseudogene","termid":"PBO:0047195"}


id: PBO:0056568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 3","termid":"PBO:0056568"}


id: GO:0006530
data:
  {"annotated_genes":["SJAG_00881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101399],"is_not":false,"summary":null,"term":"GO:0006530"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"asparagine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"asparagine breakdown","type":"exact"},{"name":"asparagine catabolism","type":"exact"},{"name":"asparagine degradation","type":"exact"}],"termid":"GO:0006530","terms_by_termid":{"GO:0006530":null}}


id: GO:0016709
data:
  {"annotated_genes":["SJAG_00459","SJAG_04608","SJAG_00370","SJAG_04000","SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98688,104621],"is_not":false,"summary":null,"term":"GO:0016709"},{"annotations":[108269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004499"},{"annotations":[76262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004506"},{"annotations":[84256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00459":null,"SJAG_03750":null,"SJAG_04000":null,"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:1.14.13.-","Reactome:R-HSA-2162187","Reactome:R-HSA-2162194"],"synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen","type":"related"}],"termid":"GO:0016709","terms_by_termid":{"GO:0004499":null,"GO:0004506":null,"GO:0008398":null,"GO:0016709":null}}


id: PBO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by heat shock","termid":"PBO:0001336"}


id: PBO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin/PY protein 1 (predicted)","termid":"PBO:0000341"}


id: PBO:0083978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase II catalytic subunit; required to trim the final glucose in N-linked glycans; required for normal cell wall synthesis; mutations in rot2 suppress tor2 mutations, and are synthetically lethal with rot1 mutations","termid":"PBO:0083978"}


id: GO:0021726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral reticular nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:curators","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral reticular nucleus development","termid":"GO:0021726"}


id: GO:0006075
data:
  {"annotated_genes":["SJAG_01290","SJAG_04666","SJAG_01787","SJAG_03705","SJAG_00610","SJAG_05285","SJAG_01835","SJAG_01288","SJAG_04668","SJAG_02222","SJAG_04462","SJAG_04483","SJAG_04771","SJAG_00876","SJAG_00218","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[103155,101511,83864,87252,87261,108417,111005,104647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[83320,88065],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[98308,113026,86478,88051,100753],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-beta-D-glucan biosynthetic process","type":"exact"},{"name":"1,3-beta-glucan anabolism","type":"exact"},{"name":"1,3-beta-glucan biosynthesis","type":"exact"},{"name":"1,3-beta-glucan formation","type":"exact"},{"name":"1,3-beta-glucan synthesis","type":"exact"},{"name":"beta-1,3 glucan anabolism","type":"exact"},{"name":"beta-1,3 glucan biosynthesis","type":"exact"},{"name":"beta-1,3 glucan biosynthetic process","type":"exact"},{"name":"beta-1,3 glucan formation","type":"exact"},{"name":"beta-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0006075","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0015891
data:
  {"annotated_genes":["SJAG_02735","SJAG_02834","SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108051],"is_not":false,"summary":null,"term":"GO:0015891"},{"annotations":[106086,106087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"siderophore transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015892"],"synonyms":[{"name":"iron-siderochrome transport","type":"narrow"},{"name":"iron-siderophore transport","type":"exact"},{"name":"siderochrome transport","type":"narrow"},{"name":"siderophore-iron transport","type":"exact"}],"termid":"GO:0015891","terms_by_termid":{"GO:0015891":null,"GO:0044718":null}}


id: PBO:0029738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_II_activity","termid":"PBO:0029738"}


id: GO:0150024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an oxidised low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:bc","PMID:27607416","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidised low-density lipoprotein particle clearance","synonyms":[{"name":"ox-LDL particle clearance","type":"exact"},{"name":"oxLDL particle clearance","type":"exact"},{"name":"oxidised LDL particle clearance","type":"exact"},{"name":"oxidized LDL particle clearance","type":"exact"},{"name":"oxidized low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:0150024"}


id: PBO:0067500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 636, pseudogene","termid":"PBO:0067500"}


id: PR:000050473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PRO:DAN","PMID:10651902","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q09914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1/GTP+","pombase_gene_id":"SPAC1F7.04","synonyms":[{"name":"Spom-rho1/GTP+","type":"exact"},{"name":"rho1/GTP+","type":"exact"}],"termid":"PR:000050473"}


id: GO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005730","GO:0005575"],"is_obsolete":false,"name":"granular component","secondary_identifiers":["NIF_Subcellular:sao1217793903"],"synonyms":[{"name":"pars granulosa","type":"broad"}],"termid":"GO:0001652"}


id: PR:A6X970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.04c","synonyms":[{"name":"Spom972h-SPAC23C4.04c","type":"exact"}],"termid":"PR:A6X970"}


id: PBO:0075102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 151","termid":"PBO:0075102"}


id: PBO:0044619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin, CUB and LCCL domain containing 2","termid":"PBO:0044619"}


id: PBO:0072793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 3","termid":"PBO:0072793"}


id: PBO:0004513
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.16","termid":"PBO:0004513"}


id: PBO:0031120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spontaneous_diploidization","termid":"PBO:0031120"}


id: PATO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording not completed blocked passage or view.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"open","termid":"PATO:0000610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closure incomplete","termid":"PATO:0000609"}


id: GO:0036036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a cardiac neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["PMID:20490374","GOC:hjd","PMID:17076275","PMID:18539270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell delamination","termid":"GO:0036032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell delamination","termid":"GO:0036036"}


id: FYPO:0005446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished molecular function","synonyms":[{"name":"molecular function abolished","type":"exact"}],"termid":"FYPO:0005446"}


id: GO:0043449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n, as carried out by individual cells.","definition_xrefs":["GOC:jl","Wikipedia:Alkene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular alkene metabolic process","synonyms":[{"name":"alkene metabolism","type":"exact"}],"termid":"GO:0043449"}


id: FYPO:0002808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}


id: FYPO:0005341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is decreased during a cellular response to hydroxyurea. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased chromatin binding during cellular response to hydroxyurea","synonyms":[{"name":"decreased chromatin binding during cellular response to HU","type":"exact"},{"name":"reduced chromatin binding during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005341"}


id: GO:0062143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-propargylglycine (Pra). L-propargylglycine is an antibiotic produced by Streptomyces bacteria.","definition_xrefs":["PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound biosynthetic process","termid":"GO:0120237"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-propargylglycine biosynthetic process","termid":"GO:0062143"}


id: PBO:0052725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 17","termid":"PBO:0052725"}


id: PBO:0041880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATIP antisense RNA 2","termid":"PBO:0041880"}


id: PBO:0055859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 5 like (pseudogene)","termid":"PBO:0055859"}


id: PBO:0041356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4B antisense RNA 1","termid":"PBO:0041356"}


id: GO:0034216
data:
  {"annotated_genes":["SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96179],"is_not":false,"summary":null,"term":"GO:0034216"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: thiamine(out) + H+(out) = thiamine(in) + H+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine:proton symporter activity","termid":"GO:0034215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity thiamine:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:proton symporter activity","type":"exact"},{"name":"high-affinity thiamine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0034216","terms_by_termid":{"GO:0034216":null}}


id: GO:0090317
data:
  {"annotated_genes":["SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed movement of proteins within cells.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"negatively_regulates","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090317","terms_by_termid":{"GO:0042308":null}}


id: PBO:0108946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 3","termid":"PBO:0108946"}


id: PBO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_to_vacuole","termid":"PBO:0031544"}


id: PR:O94354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An argininosuccinate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02459","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.05c","secondary_identifiers":["UniProtKB:O94354"],"synonyms":[{"name":"Spom972h-ASS1","type":"exact"},{"name":"citrulline--aspartate ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94354"}


id: PBO:0029503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029503"}


id: PBO:0090456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER thiol oxidase Erv2","termid":"PBO:0090456"}


id: PBO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP38 divergent transcript","termid":"PBO:0080076"}


id: GO:0032351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"negatively_regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hormone metabolic process","synonyms":[{"name":"down regulation of hormone metabolic process","type":"exact"},{"name":"down-regulation of hormone metabolic process","type":"exact"},{"name":"downregulation of hormone metabolic process","type":"exact"},{"name":"inhibition of hormone metabolic process","type":"narrow"},{"name":"negative regulation of hormone metabolism","type":"exact"}],"termid":"GO:0032351"}


id: PBO:0088301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35A","termid":"PBO:0088301"}


id: PBO:0080355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 10, pseudogene","termid":"PBO:0080355"}


id: PR:Q1K9C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9C2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.01c","synonyms":[{"name":"Spom972h-sir1","type":"exact"}],"termid":"PR:Q1K9C2"}


id: PBO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family protein","termid":"PBO:0002705"}


id: PBO:0049611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 14","termid":"PBO:0049611"}


id: PBO:0045626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 38 (pseudogene)","termid":"PBO:0045626"}


id: GO:0034378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-covalent aggregation and arrangement of proteins and lipids in the intestine to form a chylomicron.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle assembly","termid":"GO:0034377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"chylomicron assembly","termid":"GO:0034378"}


id: PBO:0079776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose glycoprotein glucosyltransferase 1","termid":"PBO:0079776"}


id: PR:Q9P7E0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- qcr10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7E0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.08","synonyms":[{"name":"Spom972h-qcr10","type":"exact"},{"name":"complex III subunit 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex subunit qcr10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7E0"}


id: PBO:0046379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 3","termid":"PBO:0046379"}


id: GO:0060093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the frequency, rate or extent of glycinergic synaptic transmission. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dph","GOC:dms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, glycinergic","synonyms":[{"name":"negative regulation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060093"}


id: PBO:0090655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase","termid":"PBO:0090655"}


id: _global:results_in_determination_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","secondary_identifiers":["RO:0002349","GOREL:0001018"],"termid":"_global:results_in_determination_of"}


id: SO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved a contact with another molecule.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"molecular_contact_region","synonyms":[{"name":"molecular contact region","type":"related"}],"termid":"SO:0100002"}


id: PBO:0052738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 30","termid":"PBO:0052738"}


id: PBO:0066268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member B","termid":"PBO:0066268"}


id: PBO:0080831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAP1 pseudogene 2","termid":"PBO:0080831"}


id: FYPO:0004414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"increased phosphatase activity during phosphate starvation","type":"exact"}],"termid":"FYPO:0004414"}


id: PBO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 2","termid":"PBO:0043131"}


id: RO:0002433
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p contributes to morphology of w if and only if a change in the morphology of p entails a change in the morphology of w. Examples: every skull contributes to morphology of the head which it is a part of. Counter-example: nuclei do not generally contribute to the morphology of the cell they are part of, as they are buffered by cytoplasm.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_morphology_of","termid":"RO:0002433"}


id: PBO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 centriole and centriolar satellite protein","termid":"PBO:0061810"}


id: GO:0051231
data:
  {"annotated_genes":["SJAG_04745","SJAG_01215","SJAG_01297","SJAG_01613","SJAG_00773","SJAG_02246","SJAG_04003","SJAG_01224","SJAG_00794","SJAG_04841","SJAG_03048","SJAG_00082","SJAG_02624","SJAG_02336","SJAG_00244","SJAG_00930","SJAG_02761","SJAG_03540","SJAG_04464","SJAG_04597","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74962,76711,90913],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[96933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051232"},{"annotations":[96937],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903562"},{"annotations":[102807,113755,113253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000022"},{"annotations":[98989,95896,90389],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[94176,95897,103622,96941,92864,99355,95368],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[90391,104205,94770,92865],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[97846],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902845"},{"annotations":[85732,90039],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902846"},{"annotations":[106310],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032888"},{"annotations":[110267],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the distance is lengthened between poles of the spindle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00930":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"spindle elongation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0051231","terms_by_termid":{"GO:0000022":null,"GO:0000073":null,"GO:0032888":null,"GO:0051232":null,"GO:0051256":null,"GO:0061804":null,"GO:0061805":null,"GO:0110162":null,"GO:1902845":null,"GO:1902846":null,"GO:1903562":null}}


id: GO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the by propagation of the molecular signals via beta-catenin, and end with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["PMID:19619488","PMID:11532397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"canonical Wnt signaling pathway","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"canonical Wnt receptor signaling pathway","type":"exact"},{"name":"canonical Wnt-activated signaling pathway","type":"exact"},{"name":"frizzled-1 receptor signaling pathway","type":"narrow"}],"termid":"GO:0060070"}


id: GO:0008074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses guanylate cyclase activity and is not bound to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"guanylate cyclase complex, soluble","termid":"GO:0008074"}


id: GO:0044585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellobiose, a disaccharide that represents the basic repeating unit of cellulose.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellobiose binding","termid":"GO:0044585"}


id: PBO:0062953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1","termid":"PBO:0062953"}


id: PBO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc5","termid":"PBO:0001205"}


id: PBO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 41","termid":"PBO:0044354"}


id: GO:0140754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in intracellular membranes are reorganized by viral proteins that perturb membrane integrity and can cause an extensive rearrangement of cellular membranes, forming membranous webs, which are thought to be the site of replication or certain viruses, for example the HPV virus.","definition_xrefs":["PMID:19376974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reorganization of cellular membranes to establish viral sites of replication","termid":"GO:0140754"}


id: FYPO:0000037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize cysteine, and therefore requires cysteine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for sulfur-containing amino acid","termid":"FYPO:0003355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for cysteine","synonyms":[{"name":"cysteine auxotrophy","type":"exact"},{"name":"growth auxotrophic for cysteine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0000037"}


id: PBO:0026811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ethanol","termid":"PBO:0026811"}


id: GO:0040028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:ma","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vulval development","termid":"GO:0040028"}


id: GO:0141122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the breakage of a nitrogen-oxygen bond by means other than hydrolysis and oxidation.","definition_xrefs":["EC:4.8.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}


id: FYPO:0006811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which large chromosomal rearrangements occur at a normal (i.e. indistinguishable from wild type) frequency. Chromosomal rearrangements may include deletions, duplications, inversions, and translocations.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal gross chromosomal rearrangement frequency","synonyms":[{"name":"normal occurrence of gross chromosomal rearrangement","type":"exact"}],"termid":"FYPO:0006811"}


id: PBO:0066819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 118","termid":"PBO:0066819"}


id: PBO:0061641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 19","termid":"PBO:0061641"}


id: GO:0140010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-aspartate from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"D-aspartate transmembrane transporter activity","termid":"GO:0140010"}


id: PBO:0059888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 11","termid":"PBO:0059888"}


id: GO:0019561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylalanine under anaerobic conditions; occurs via the intermediates phenylpyruvate and phenylacetaldehyde.","definition_xrefs":["GOC:mah","MetaCyc:ANAPHENOXI-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine catabolic process","termid":"GO:0006559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"anaerobic phenylalanine oxidation","termid":"GO:0019561"}


id: PBO:0089724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Cdc42/Rho3/Rho4 (Gef3)","termid":"PBO:0089724"}


id: GO:0072664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a peroxisome, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to peroxisome","termid":"GO:0072662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0051179","GO:0007031","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in peroxisome","termid":"GO:0072664"}


id: PBO:0077887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPRG1 antisense RNA 1","termid":"PBO:0077887"}


id: PR:Q9Y7R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04301","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.03c","secondary_identifiers":["UniProtKB:Q9Y7R3"],"synonyms":[{"name":"CAPH homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCAPH","type":"exact"},{"name":"barren homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p105 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q9Y7R3"}


id: GO:0043098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a purine deoxyribonucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}


id: PBO:0089506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1","termid":"PBO:0089506"}


id: PBO:0049093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 150","termid":"PBO:0049093"}


id: PBO:0064853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 4","termid":"PBO:0064853"}


id: GO:0047697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-beta-alanopine + H2O + NAD+ = beta-alanine + H+ + NADH + pyruvate.","definition_xrefs":["RHEA:21684","EC:1.5.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta-alanopine dehydrogenase activity","secondary_identifiers":["MetaCyc:BETA-ALANOPINE-DEHYDROGENASE-RXN","KEGG_REACTION:R00906"],"synonyms":[{"name":"N-(D-1-carboxyethyl)-beta-alanine:NAD+ oxidoreductase (beta-alanine-forming)","type":"related"},{"name":"b-alanopine dehydrogenase activity","type":"exact"}],"termid":"GO:0047697"}


id: PBO:0016058
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing EndoNuclease","termid":"PBO:0016058"}


id: PBO:0077013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin 2","termid":"PBO:0077013"}


id: GO:1990213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of salicylic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml","PMID:17722699","PMID:20565685"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of salicylic acid levels in host (obsolete GO:1990213)","termid":"GO:1990213"}


id: PBO:0047083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member B, pseudogene","termid":"PBO:0047083"}


id: GO:0110079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of placenta blood vessel development.","definition_xrefs":["PMID:27748453","GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"placenta blood vessel development","termid":"GO:0060674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of placenta blood vessel development","termid":"GO:0110079"}


id: GO:0047672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + benzoyl-CoA = N-benzoylanthranilate + CoA.","definition_xrefs":["EC:2.3.1.144","RHEA:21600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"anthranilate N-benzoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02453","MetaCyc:ANTHRANILATE-N-BENZOYLTRANSFERASE-RXN"],"synonyms":[{"name":"benzoyl-CoA:anthranilate N-benzoyltransferase","type":"broad"}],"termid":"GO:0047672"}


id: PBO:0002964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family helicase Ino80","termid":"PBO:0002964"}


id: PATO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's resembling a groove or fissure.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft","termid":"PATO:0000403"}


id: GO:1902300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galactaric acid anion (galactarate) is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"galactarate transmembrane transport","secondary_identifiers":["GO:0042871"],"synonyms":[{"name":"D-galactarate transport","type":"related"},{"name":"galactarate transport","type":"related"},{"name":"galactaric acid anion transport","type":"exact"}],"termid":"GO:1902300"}


id: GO:0021936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the frequency, rate or extent of granule cell precursor proliferation.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"regulates","term_name":"cerebellar granule cell precursor proliferation","termid":"GO:0021930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021936"}


id: PBO:0027779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytokinesis","termid":"PBO:0027779"}


id: PBO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shwachman-Bodian-Diamond syndrome","termid":"PBO:0001665"}


id: GO:0052890
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a flavin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:1.3.8.-"],"termid":"GO:0052890","terms_by_termid":{"GO:0003860":null}}


id: GO:0018505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydronaphthalene-1,2-diol + NAD+ = naphthalene-1,2-diol + NADH + H+.","definition_xrefs":["EC:1.3.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cis-1,2-dihydro-1,2-dihydroxynaphthalene dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.29-RXN","RHEA:11832","UM-BBD_enzymeID:e0122"],"synonyms":[{"name":"(+)-cis-naphthalene dihydrodiol dehydrogenase activity","type":"related"},{"name":"1,2-dihydroxy-1,2-dihydroxynaphthalene dehydrogenase activity","type":"exact"},{"name":"cis-1,2-dihydronaphthalene-1,2-diol:NAD+ 1,2-oxidoreductase activity","type":"related"},{"name":"cis-dihydrodiol naphthalene dehydrogenase activity","type":"related"},{"name":"cis-naphthalene dihydrodiol dehydrogenase activity","type":"related"},{"name":"naphthalene dihydrodiol dehydrogenase activity","type":"related"}],"termid":"GO:0018505"}


id: PBO:0079814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UHRF1BP1L divergent transcript","termid":"PBO:0079814"}


id: GO:0120256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefinic compound catabolic process","synonyms":[{"name":"alkene substituted compound breakdown","type":"exact"},{"name":"alkene substituted compound catabolic process","type":"exact"},{"name":"alkene substituted compound catabolism","type":"exact"},{"name":"alkene substituted compound degradation","type":"exact"}],"termid":"GO:0120256"}


id: GO:1900103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"activation of ER unfolded protein response","type":"exact"},{"name":"activation of SREBP-mediated signalling pathway","type":"related"},{"name":"activation of endoplasmic reticulum unfolded protein response","type":"narrow"},{"name":"activation of erUPR","type":"exact"},{"name":"positive regulation of ER unfolded protein response","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"positive regulation of erUPR","type":"exact"},{"name":"up regulation of ER unfolded protein response","type":"exact"},{"name":"up regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up regulation of erUPR","type":"exact"},{"name":"up-regulation of ER unfolded protein response","type":"exact"},{"name":"up-regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up-regulation of erUPR","type":"exact"},{"name":"upregulation of ER unfolded protein response","type":"exact"},{"name":"upregulation of SREBP-mediated signalling pathway","type":"related"},{"name":"upregulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"upregulation of erUPR","type":"exact"}],"termid":"GO:1900103"}


id: PBO:0042685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein zeta","termid":"PBO:0042685"}


id: GO:0042727
data:
  {"annotated_genes":["SJAG_01937","SJAG_04845","SJAG_00491","SJAG_02491","SJAG_00376","SJAG_04711","SJAG_00480","SJAG_01054","SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[72527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[112319,83277,102174,77524,76956,75667,71373,110913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"},{"relation_name":"is_a","term_name":"cellular nitrogen compound biosynthetic process","termid":"GO:0044271"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_01937":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"flavin-containing compound anabolism","type":"exact"},{"name":"flavin-containing compound biosynthesis","type":"exact"},{"name":"flavin-containing compound formation","type":"exact"},{"name":"flavin-containing compound synthesis","type":"exact"},{"name":"riboflavin and derivative biosynthesis","type":"related"},{"name":"riboflavin and derivative biosynthetic process","type":"related"},{"name":"vitamin B2 and derivative biosynthesis","type":"related"},{"name":"vitamin B2 and derivative biosynthetic process","type":"related"}],"termid":"GO:0042727","terms_by_termid":{"GO:0006747":null,"GO:0009231":null,"GO:0009398":null}}


id: PBO:0064045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 79","termid":"PBO:0064045"}


id: PBO:0059847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like","termid":"PBO:0059847"}


id: GO:1902777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-).","definition_xrefs":["GOC:dph","PMID:24463506","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) metabolic process","termid":"GO:1902776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) breakdown","type":"exact"},{"name":"6-sulfoquinovose(1-) catabolism","type":"exact"},{"name":"6-sulfoquinovose(1-) degradation","type":"exact"}],"termid":"GO:1902777"}


id: PBO:0085788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function","termid":"PBO:0085788"}


id: PBO:0072991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCMH1 divergent transcript","termid":"PBO:0072991"}


id: GO:0014890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in smooth muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle atrophy","termid":"GO:0014890"}


id: FYPO:0003802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003802"}


id: PBO:0005235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 activated protein kinase inhibitor Skb15","termid":"PBO:0005235"}


id: PBO:0041930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 5","termid":"PBO:0041930"}


id: PBO:0070215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 147 pseudogene","termid":"PBO:0070215"}


id: PBO:0050800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 7 pseudogene 1","termid":"PBO:0050800"}


id: GO:0071559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to transforming growth factor beta","synonyms":[{"name":"response to TGF-beta stimulus","type":"exact"},{"name":"response to TGFbeta stimulus","type":"exact"},{"name":"response to transforming growth factor beta stimulus","type":"exact"}],"termid":"GO:0071559"}


id: PBO:0050076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemicentin 1","termid":"PBO:0050076"}


id: PBO:0066371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 14","termid":"PBO:0066371"}


id: GO:0007425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an epithelial cell within an open tracheal system regardless of its environment; upon determination, the cell fate cannot be reversed. Tracheal cells are set aside as 10 clusters of approximately 80 cells on each side of the embryo (termed tracheal placodes). An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11063940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate determination, open tracheal system","secondary_identifiers":["GO:0046846"],"synonyms":[{"name":"tracheal cell fate determination","type":"broad"},{"name":"tracheal epithelial cell fate determination","type":"exact"},{"name":"tracheal placode cell fate determination","type":"related"}],"termid":"GO:0007425"}


id: PBO:0082544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein that contains a putative GPI-attachment site; secreted by regenerating protoplasts; up-regulated by activation of the cell integrity pathway, as mediated by Rlm1p; upregulated by cell wall damage via disruption of FKS1; PST1 has a paralog, ECM33, that arose from the whole genome duplication","termid":"PBO:0082544"}


id: PBO:0079891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase homolog","termid":"PBO:0079891"}


id: PBO:0035838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0035838"}


id: GO:0070188
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A nuclear telomere cap complex that is formed by the association of the Stn1 and Ten1 proteins with telomeric DNA; in some species a third protein is present.","definition_xrefs":["PMID:19064932","GOC:mah","GOC:vw","PMID:17715303"],"gene_count":0,"genotype_count":0,"name":"obsolete Stn1-Ten1 complex (obsolete GO:0070188)","termid":"GO:0070188"}


id: PBO:0030516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_4-nitroquinoline_N-oxide","termid":"PBO:0030516"}


id: PBO:0034139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homoplasy_relationship_with","termid":"PBO:0034139"}


id: PBO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer=","termid":"PBO:0018033"}


id: GO:1905111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pulmonary blood vessel remodeling.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:bc","PMID:22161164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pulmonary blood vessel remodeling","termid":"GO:1905109"},{"relation_name":"is_a","term_name":"positive regulation of blood vessel remodeling","termid":"GO:2000504"},{"relation_name":"positively_regulates","term_name":"pulmonary blood vessel remodeling","termid":"GO:0101010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pulmonary blood vessel remodeling","synonyms":[{"name":"activation of pulmonary blood vessel remodeling","type":"narrow"},{"name":"positive regulation of pulmonary blood vessel remodelling","type":"exact"},{"name":"up regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"up-regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"upregulation of pulmonary blood vessel remodeling","type":"exact"}],"termid":"GO:1905111"}


id: PBO:0058433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4803","termid":"PBO:0058433"}


id: GO:0097253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-hydroxybutyrate from one side of a membrane to the other. Beta-hydroxybutyrate is the conjugate base of (R)-3-hydroxybutyric acid.","definition_xrefs":["GOC:dsf","PMID:22302940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"beta-hydroxybutyrate transmembrane transporter activity","synonyms":[{"name":"(R)-3-hydroxybutyrate transmembrane transporter activity","type":"exact"},{"name":"3-hydroxybutanoic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097253"}


id: PBO:0079066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 2-1","termid":"PBO:0079066"}


id: FYPO:0000822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of P-factor, the mating pheromone produced by mating type plus cells, released into the growth medium is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of pheromone in growth medium","termid":"FYPO:0000820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"decreased concentration of P-factor in growth medium","synonyms":[{"name":"decreased accumulation of P-factor in growth medium","type":"related"},{"name":"decreased level of P-factor in growth medium","type":"exact"},{"name":"decreased release of P-factor into growth medium","type":"related"},{"name":"reduced concentration of P-factor in growth medium","type":"exact"}],"termid":"FYPO:0000822"}


id: PBO:0035865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_movement_within_plasma_membrane_at_cell_side","termid":"PBO:0035865"}


id: GO:0048918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line nerve over time, from its formation to the mature structure. The posterior lateral line nerve innervates hair cells of the PLL and projects to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["GOC:jid","GOC:dph","ISBN:0125296509","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve development","termid":"GO:0048892"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve development","secondary_identifiers":["GO:0021733"],"synonyms":[{"name":"PLLN development","type":"exact"},{"name":"caudal lateral line nerve development","type":"exact"}],"termid":"GO:0048918"}


id: PBO:0048483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase family member 7","termid":"PBO:0048483"}


id: MOD:01022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2-piperidinecarboxylic acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-piperidinecarboxylic acid","synonyms":[{"name":"Pip","type":"exact"}],"termid":"MOD:01022"}


id: GO:0033239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"negatively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine metabolic process","synonyms":[{"name":"negative regulation of amine metabolism","type":"exact"},{"name":"negative regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033239"}


id: PBO:0086067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Ulp1p; a Ubl (ubiquitin-like protein)-specific protease for Smt3p protein conjugates","termid":"PBO:0086067"}


id: GO:2000099
data:
  {"annotated_genes":["SJAG_00333","SJAG_02022","SJAG_00845","SJAG_00236","SJAG_03048","SJAG_00661","SJAG_03637","SJAG_01799","SJAG_04461","SJAG_00596","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97864],"is_not":false,"summary":null,"term":"GO:2000099"},{"annotations":[89376,99150,100766,95686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[99976,91267,108307,90210,86828,113870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of bipolar cell polarity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"regulates","term_name":"establishment or maintenance of bipolar cell polarity","termid":"GO:0061245"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03048":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment or maintenance of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000099","terms_by_termid":{"GO:2000099":null,"GO:2000100":null,"GO:2000247":null}}


id: PBO:0089514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga2","termid":"PBO:0089514"}


id: GO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to effect a change in the activity of the receptor. Ligands may be produced by the same, or different, cell that expresses the receptor. Ligands may diffuse extracellularly from their point of origin to the receiving cell, or remain attached to an adjacent cell surface (e.g. Notch ligands).","definition_xrefs":["GOC:kv","GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0005515","GO:0140677","GO:0005488"],"is_obsolete":false,"name":"receptor ligand activity","secondary_identifiers":["GO:0071884"],"synonyms":[{"name":"receptor agonist activity","type":"broad"},{"name":"signaling molecule","type":"exact"},{"name":"signaling receptor ligand activity","type":"exact"},{"name":"vitamin D receptor activator activity","type":"narrow"}],"termid":"GO:0048018"}


id: GO:1905139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the apical ectodermal ridge. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PMID:9323126","GO_REF:0000081","PMID:18359901","GOC:TermGenie","PMID:9596583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"appendage morphogenesis","termid":"GO:0035107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical ectodermal ridge formation","synonyms":[{"name":"AER formation","type":"related"},{"name":"apical epidermal ridge formation","type":"exact"},{"name":"crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905139"}


id: PBO:0034290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_end_location","termid":"PBO:0034290"}


id: PBO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_raffinose","termid":"PBO:0030410"}


id: MOD:01405
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-proline residue to form L-proline thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0482","PubMed:7592021","PubMed:8557573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-proline residue","termid":"MOD:02054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(2S)-pyrrolidin-2-yl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Pro-Cys)","type":"exact"},{"name":"L-proline thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01405"}


id: GO:1903767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of sweet taste receptor activity.","definition_xrefs":["GO_REF:0000088","GOC:rl","PMID:16720576","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor complex","termid":"GO:1903768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sweet taste receptor complex","termid":"GO:1903767"}


id: PBO:0070768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 4","termid":"PBO:0070768"}


id: PBO:0041522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 74","termid":"PBO:0041522"}


id: GO:0061076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural retina development","termid":"GO:0061074"},{"relation_name":"is_a","term_name":"negative regulation of retina development in camera-type eye","termid":"GO:1902867"},{"relation_name":"negatively_regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural retina development","termid":"GO:0061076"}


id: PBO:0045018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 1C","termid":"PBO:0045018"}


id: PBO:0061241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 2","termid":"PBO:0061241"}


id: GO:0099629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane of a symmetric synapse, consisting of anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components that spatially and functionally organize the neurotransmitter receptors at the synapse. This structure is not as thick or electron dense as the postsynaptic densities found in asymmetric synapses.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization","termid":"GO:0099572"},{"relation_name":"part_of","term_name":"symmetric synapse","termid":"GO:0032280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse","synonyms":[{"name":"postsynaptic density of inhibitory synapse","type":"exact"}],"termid":"GO:0099629"}


id: GO:0019629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionate that occurs in the 2-methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate catabolic process","termid":"GO:0019543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"propionate catabolic process, 2-methylcitrate cycle","synonyms":[{"name":"propionate breakdown, 2-methylcitrate cycle","type":"exact"},{"name":"propionate degradation, 2-methylcitrate cycle","type":"exact"}],"termid":"GO:0019629"}


id: PBO:0011421
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"may not be protein coding","termid":"PBO:0011421"}


id: PBO:0072072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 2","termid":"PBO:0072072"}


id: GO:2000659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-1-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-1-mediated signaling pathway","termid":"GO:0070498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-1-mediated signaling pathway","synonyms":[{"name":"regulation of IL-1 alpha-mediated signaling pathway","type":"related"},{"name":"regulation of IL-1 beta-mediated signaling pathway","type":"related"},{"name":"regulation of IL-1-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-1 alpha-mediated signaling pathway","type":"related"},{"name":"regulation of interleukin-1 beta-mediated signaling pathway","type":"related"},{"name":"regulation of interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:2000659"}


id: GO:0070495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thrombin-activated receptor protein signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin-activated receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of thrombin-activated receptor signaling pathway","termid":"GO:0070494"},{"relation_name":"negatively_regulates","term_name":"thrombin-activated receptor signaling pathway","termid":"GO:0070493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of thrombin-activated receptor signaling pathway","synonyms":[{"name":"negative regulation of thrombin receptor signaling pathway","type":"exact"},{"name":"negative regulation of thrombin receptor signalling pathway","type":"related"}],"termid":"GO:0070495"}


id: FYPO:0001101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased protein level during cellular response to H2O2","type":"exact"},{"name":"decreased protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001101"}


id: PBO:0030594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_aspartate_level","termid":"PBO:0030594"}


id: GO:0097752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the stability of DNA.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA stability","termid":"GO:0097752"}


id: PBO:0027264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_growth","termid":"PBO:0027264"}


id: GO:0009107
data:
  {"annotated_genes":["SJAG_03553","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74566,92749],"is_not":false,"summary":null,"term":"GO:0009107"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"lipoate metabolic process","termid":"GO:0009106"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03198":null,"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"lipoate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0009105"],"synonyms":[{"name":"lipoate anabolism","type":"exact"},{"name":"lipoate biosynthesis","type":"exact"},{"name":"lipoate formation","type":"exact"},{"name":"lipoate synthesis","type":"exact"},{"name":"lipoic acid anabolism","type":"exact"},{"name":"lipoic acid biosynthesis","type":"exact"},{"name":"lipoic acid biosynthetic process","type":"exact"},{"name":"lipoic acid formation","type":"exact"},{"name":"lipoic acid synthesis","type":"exact"}],"termid":"GO:0009107","terms_by_termid":{"GO:0009107":null}}


id: SO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron within an intron. Twintrons are group II or III introns, into which another group II or III intron has been transposed.","definition_xrefs":["PMID:7823908","PMID:1899376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twintron","secondary_identifiers":["http://en.wikipedia.org/wiki/Twintron"],"termid":"SO:0000406"}


id: PBO:0056644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 5","termid":"PBO:0056644"}


id: PBO:0017628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transmembrane transporter (predicted)","termid":"PBO:0017628"}


id: GO:0009336
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation adenylylsulfate from sulfate and ATP.","definition_xrefs":["PMID:15184554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase complex","termid":"GO:1902503"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sulfate adenylyltransferase complex (ATP)","synonyms":[{"name":"sulphate adenylyltransferase complex (ATP)","type":"exact"}],"termid":"GO:0009336"}


id: PATO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000134 absolute_angle (obsolete PATO:0000134)","termid":"PATO:0000134"}


id: PBO:0068042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 347","termid":"PBO:0068042"}


id: PBO:0049840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEATR3 antisense RNA 1","termid":"PBO:0049840"}


id: SO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that utilizes the E. coli F factor.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Fosmid"],"synonyms":[{"name":"fosmid vector","type":"related"}],"termid":"SO:0000158"}


id: GO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to linoleic acid","synonyms":[{"name":"response to linoleate","type":"exact"}],"termid":"GO:0070543"}


id: GO:0031737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CX3C chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CX3C chemokine receptor binding","synonyms":[{"name":"CX3C chemokine receptor ligand","type":"narrow"},{"name":"fractalkine receptor binding","type":"exact"}],"termid":"GO:0031737"}


id: FYPO:0006869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 36 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"},{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K36 methylation","synonyms":[{"name":"abolished histone H3 K36 methylation","type":"exact"},{"name":"abolished histone H3K36me","type":"exact"},{"name":"abolished histone lysine H3 K36 methylation","type":"exact"},{"name":"histone H3-K36 methylation abolished","type":"exact"},{"name":"histone H3-K36 methylation absent","type":"exact"}],"termid":"FYPO:0006869"}


id: PBO:0013805
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HUT1","termid":"PBO:0013805"}


id: PBO:0086822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL011C is not an essential gene","termid":"PBO:0086822"}


id: PBO:0061661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35 pseudogene 1","termid":"PBO:0061661"}


id: PBO:0049518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.J histone","termid":"PBO:0049518"}


id: GO:0010063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces or promotes trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of plant epidermal cell differentiation","termid":"GO:1903890"},{"relation_name":"positively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trichoblast fate specification","synonyms":[{"name":"activation of trichoblast fate","type":"narrow"},{"name":"stimulation of trichoblast fate","type":"narrow"},{"name":"up regulation of trichoblast fate","type":"exact"},{"name":"up-regulation of trichoblast fate","type":"exact"},{"name":"upregulation of trichoblast fate","type":"exact"}],"termid":"GO:0010063"}


id: PBO:0067980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 282","termid":"PBO:0067980"}


id: PR:O13855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.01c","synonyms":[{"name":"Spom972h-SPAC1A6.01c","type":"exact"}],"termid":"PR:O13855"}


id: PBO:0067847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 149","termid":"PBO:0067847"}


id: GO:0046832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of RNA from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"negatively_regulates","term_name":"RNA export from nucleus","termid":"GO:0006405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA export from nucleus","synonyms":[{"name":"down regulation of RNA export from nucleus","type":"exact"},{"name":"down-regulation of RNA export from nucleus","type":"exact"},{"name":"downregulation of RNA export from nucleus","type":"exact"},{"name":"inhibition of RNA export from nucleus","type":"narrow"},{"name":"negative regulation of RNA export from cell nucleus","type":"exact"},{"name":"negative regulation of RNA export out of nucleus","type":"exact"},{"name":"negative regulation of RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of RNA-nucleus export","type":"exact"}],"termid":"GO:0046832"}


id: GO:0043354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an enucleate erythrocyte to attain its fully functional state. An enucleate erythrocyte is an erythrocyte without a nucleus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte maturation","termid":"GO:0043249"},{"relation_name":"part_of","term_name":"enucleate erythrocyte development","termid":"GO:0048822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleate erythrocyte maturation","synonyms":[{"name":"enucleate RBC maturation","type":"exact"},{"name":"enucleate red blood cell maturation","type":"exact"}],"termid":"GO:0043354"}


id: PBO:0080388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS16 core subunit of CORVET and HOPS complexes","termid":"PBO:0080388"}


id: PBO:0058115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4330","termid":"PBO:0058115"}


id: _global:regulates_o_results_in_development_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the regulates relation with the results_in_development_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_development_of","secondary_identifiers":["GOREL:0001023"],"synonyms":[{"name":"regulates_o_results_in_development_of","type":"exact"}],"termid":"_global:regulates_o_results_in_development_of"}


id: PBO:0004217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb5 (predicted)","termid":"PBO:0004217"}


id: PR:O74959
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinol dehydrogenase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C736.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.13","secondary_identifiers":["UniProtKB:O74959"],"synonyms":[{"name":"Spom972h-RDH13","type":"exact"}],"termid":"PR:O74959"}


id: GO:0051363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of linking a protein to peptidoglycan via a carboxy terminal alanine carboxyl group through a pentaglycyl peptide to the lysine or diaminopimelic acid of the peptidoglycan.","definition_xrefs":["PMID:8163519","PMID:9086265","RESID:AA0383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-protein cross-linking","termid":"GO:0018104"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"peptidoglycan-protein cross-linking via L-alanyl-pentaglycyl-murein","termid":"GO:0051363"}


id: GO:0009144
data:
  {"annotated_genes":["SJAG_02564","SJAG_00027","SJAG_04487","SJAG_00136","SJAG_02009","SJAG_03852","SJAG_00605","SJAG_04849","SJAG_00542","SJAG_07003","SJAG_00685","SJAG_02105","SJAG_02598","SJAG_MIT15","SJAG_04422","SJAG_00633","SJAG_02038","SJAG_04048","SJAG_00461","SJAG_00133","SJAG_MIT37","SJAG_01471","SJAG_03828","SJAG_02945","SJAG_04334","SJAG_MIT09","SJAG_03660","SJAG_04122","SJAG_00836","SJAG_05204","SJAG_02135","SJAG_01298","SJAG_03114","SJAG_00839","SJAG_02107","SJAG_00985","SJAG_02369","SJAG_06622","SJAG_05314","SJAG_06621","SJAG_03925","SJAG_04192","SJAG_00915","SJAG_00438","SJAG_00885","SJAG_03373","SJAG_02887","SJAG_02796","SJAG_03903","SJAG_04495","SJAG_01310"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94463,93690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[99092,100866,93561,101231,104732,111542,93825,90621,76826,100864,104734,104733,98829,90151,101232,104735,104737,100865,104736,104738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[94536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[84381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[106862,93745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[74312,97715,95585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[75457,72781],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[67647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[89507,114133,111032,114137,104141,100415,103189,90456,97304,99103,88498,103276,99132,88914,84887,114128,98487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[102643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[113120],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02796":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"purine nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009144","terms_by_termid":{"GO:0006183":null,"GO:0009216":null,"GO:0015986":null,"GO:0035863":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905706":null}}


id: CHEBI:63247
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reducing agent","termid":"CHEBI:63247"}


id: PBO:0069870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1157, pseudogene","termid":"PBO:0069870"}


id: PR:Q10062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoporphyrinogen oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10742:SF16","OMA:SCHPO00102","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.07c","secondary_identifiers":["UniProtKB:Q10062"],"synonyms":[{"name":"PPO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPOX","type":"exact"}],"termid":"PR:Q10062"}


id: PBO:0017984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex subunit Tom5 (predicted)","termid":"PBO:0017984"}


id: GO:0045269
data:
  {"annotated_genes":["SJAG_03114","SJAG_00438","SJAG_00915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98485,104139,100413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005756"}]},"cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the membrane-associated Fo proteins; rotates within the catalytic core during catalysis.","definition_xrefs":["PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045261"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00438":null,"SJAG_00915":null,"SJAG_03114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting ATP synthase, central stalk","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, central stalk","type":"exact"}],"termid":"GO:0045269","terms_by_termid":{"GO:0005756":null}}


id: GO:0031423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hexon, the major protein component of the icosahedral capsid of an adenovirus.","definition_xrefs":["GOC:mah","PMID:12915569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"hexon binding","termid":"GO:0031423"}


id: GO:1902906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a proteasome storage granule.","definition_xrefs":["GO_REF:0000079","GOC:di","GOC:TermGenie","PMID:23690178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"proteasome storage granule assembly","secondary_identifiers":["GO:1990237"],"synonyms":[{"name":"PSG assembly","type":"related"},{"name":"PSG formation","type":"related"},{"name":"proteasome storage granule formation","type":"exact"},{"name":"sequestration of proteasome core complex in proteasome storage granule","type":"narrow"}],"termid":"GO:1902906"}


id: GO:0035067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone acetylation (obsolete GO:0035067)","synonyms":[{"name":"down regulation of histone acetylation","type":"exact"},{"name":"down-regulation of histone acetylation","type":"exact"},{"name":"downregulation of histone acetylation","type":"exact"},{"name":"inhibition of histone acetylation","type":"narrow"}],"termid":"GO:0035067"}


id: GO:0052414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont glucan (obsolete GO:0052414)","termid":"GO:0052414"}


id: GO:0033312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate geranylgeranyl-chlorophyll a.","definition_xrefs":["MetaCyc:PWY-5064","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll a biosynthetic process","termid":"GO:0033305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process via geranylgeranyl-chlorophyll a","synonyms":[{"name":"chlorophyll a formation via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a anabolism via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a biosynthesis via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a synthesis via geranylgeranyl-chlorophyll a","type":"exact"}],"termid":"GO:0033312"}


id: PBO:0087827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) largest subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP74","termid":"PBO:0087827"}


id: PBO:0075848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssu-2 homolog","termid":"PBO:0075848"}


id: GO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the rate or extent of water loss from an organism via the skin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of water loss via skin (obsolete GO:0033561)","synonyms":[{"name":"skin barrier function","type":"related"}],"termid":"GO:0033561"}


id: PBO:0064736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 72","termid":"PBO:0064736"}


id: GO:0018634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene + NADH + H+ + O2 = NAD+ + H2O + alpha-pinene oxide.","definition_xrefs":["RHEA:32891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alpha-pinene monooxygenase [NADH] activity","secondary_identifiers":["UM-BBD_reactionID:r0742","EC:1.14.13.155"],"termid":"GO:0018634"}


id: FYECO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited zinc","synonyms":[{"name":"limited Zn added","type":"exact"}],"termid":"FYECO:0000177"}


id: GO:0010961
data:
  {"annotated_genes":["SJAG_02578","SJAG_03516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70488,74054],"is_not":false,"summary":null,"term":"GO:0010961"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of magnesium ions within a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion homeostasis","termid":"GO:0010960"},{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_03516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular magnesium ion homeostasis","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"cellular magnesium ion homeostasis","type":"exact"}],"termid":"GO:0010961","terms_by_termid":{"GO:0010961":null}}


id: PBO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf PARP type zinc finger protein","termid":"PBO:0001397"}


id: GO:0051112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-adenosine)-L-histidine (otherwise known as tau-AMP-histidine, tele-AMP-histidine).","definition_xrefs":["RESID:AA0371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-histidine adenylylation","termid":"GO:0051111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine adenylylation, to form peptidyl-1'-(phospho-5'-adenosine)-L-histidine","termid":"GO:0051112"}


id: PBO:0012558
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens XPO1","termid":"PBO:0012558"}


id: GO:0000827
data:
  {"annotated_genes":["SJAG_02321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113905],"is_not":false,"summary":null,"term":"GO:0000827"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate = ADP + diphospho-1D-myo-inositol tetrakisphosphate. The isomeric configuration of diphospho-1D-myo-inositol tetrakisphosphate is unknown.","definition_xrefs":["PMID:11311242","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.4.21","Reactome:R-HSA-1855181","Reactome:R-HSA-1855223"],"termid":"GO:0000827","terms_by_termid":{"GO:0000827":null}}


id: PBO:0069223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 478, pseudogene","termid":"PBO:0069223"}


id: PBO:0074796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-1","termid":"PBO:0074796"}


id: GO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme to peroxidase.","definition_xrefs":["RESID:AA0280","RESID:AA0279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"peroxidase-heme linkage","synonyms":[{"name":"peroxidase-haem linkage","type":"exact"}],"termid":"GO:0018186"}


id: PR:O94740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An hsp90 co-chaperone Cdc37 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12800:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsp90 co-chaperone Cdc37 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.10","secondary_identifiers":["UniProtKB:O94740"],"synonyms":[{"name":"SPBC9B6.10","type":"related"},{"name":"Spom972h-CDC37","type":"exact"},{"name":"cell division control protein 37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hsp90 chaperone protein kinase-targeting subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94740"}


id: GO:0097540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the axoneme consisting of the inner two microtubule doublets of the 9+2 axoneme occurring in most motile cilia.","definition_xrefs":["PMID:24283352","GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal central apparatus","termid":"GO:1990716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal central pair","synonyms":[{"name":"axonemal microtubule central pair","type":"exact"},{"name":"axoneme central pair","type":"exact"},{"name":"axoneme microtubule central pair","type":"exact"},{"name":"central pair","type":"broad"},{"name":"central-pair microtubules","type":"related"}],"termid":"GO:0097540"}


id: FYPO:0005027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, has a larger diameter and volume than normal, contains two nuclei and more than one septum, and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, swollen binucleate cell with central constriction","termid":"FYPO:0002987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, swollen binucleate multiseptate cell with central constriction","synonyms":[{"name":"inviable after spore germination, binucleate without cell division, swollen with multiple septa","type":"exact"},{"name":"inviable after spore germination, undivided swollen binucleate multiseptate cell with central constriction","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen binucleate multiseptate cell with central constriction, with nuclear division without cytokinesis","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen binucleate multiseptate cell with constricted region at cell division site","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen dumbbell-shaped binucleate multiseptate cell","type":"related"},{"name":"inviable following spore germination, without cell division, swollen binucleate multiseptate cell with central constriction","type":"exact"},{"name":"inviable germinated spore, without cell division, swollen binucleate multiseptate cell with central constriction","type":"exact"},{"name":"lethal after spore germination, without cell division, swollen binucleate multiseptate cell with central constriction","type":"exact"}],"termid":"FYPO:0005027"}


id: PBO:0061960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 20 pseudogene","termid":"PBO:0061960"}


id: GO:0009637
data:
  {"annotated_genes":["SJAG_05242","SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[114288,114289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.","definition_xrefs":["GOC:ai","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02860":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to blue light","references_by_uniquename":{"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"blue light response","type":"exact"},{"name":"blue-light response","type":"exact"},{"name":"response to blue light stimulus","type":"exact"}],"termid":"GO:0009637","terms_by_termid":{"GO:0009785":null,"GO:0071483":null}}


id: PBO:0005299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WDR89 family WD repeat protein","termid":"PBO:0005299"}


id: GO:0042134
data:
  {"annotated_genes":["SJAG_03952","SJAG_02530","SJAG_03252","SJAG_04492"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73308,87184,93546,109155],"is_not":false,"summary":null,"term":"GO:0042134"}]},"cv_name":"molecular_function","definition":"Binding to an unprocessed ribosomal RNA transcript.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02530":null,"SJAG_03252":null,"SJAG_03952":null,"SJAG_04492":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"rRNA primary transcript binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pre-rRNA binding","type":"exact"}],"termid":"GO:0042134","terms_by_termid":{"GO:0042134":null}}


id: PBO:0030054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rhizoxin","termid":"PBO:0030054"}


id: PBO:0038577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRAXAS1 pseudogene 2","termid":"PBO:0038577"}


id: PBO:0058420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4789","termid":"PBO:0058420"}


id: PATO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape that is half of a sphere.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemispheroid","termid":"PATO:0005000"}


id: PBO:0063323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1","termid":"PBO:0063323"}


id: PATO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000748 discrimination value (obsolete PATO:0000748)","termid":"PATO:0000748"}


id: GO:0018780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dichloroacetate + H2O = 2 HCl + glyoxylate.","definition_xrefs":["UM-BBD_reactionID:r0383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dichloroacetate halidohydrolase activity","termid":"GO:0018780"}


id: PBO:0052334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2012","termid":"PBO:0052334"}


id: PBO:0040612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 1","termid":"PBO:0040612"}


id: PBO:0074046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 28","termid":"PBO:0074046"}


id: PBO:0087874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; involved in response to replication stress; contains WD repeats; relocalizes to the cytosol in response to hypoxia; WTM2 has a paralog, UME1, that arose from the whole genome duplication","termid":"PBO:0087874"}


id: PBO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member A","termid":"PBO:0048906"}


id: GO:0021908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["PMID:11262869","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retinoic acid receptor signaling pathway involved in spinal cord anterior/posterior pattern formation","synonyms":[{"name":"retinoic acid receptor signalling pathway in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021908"}


id: GO:0100063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates dipeptide transmembrane transport.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dipeptide transmembrane transport by transcription from RNA polymerase II promoter (obsolete GO:0100063)","termid":"GO:0100063"}


id: PBO:0080906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 6","termid":"PBO:0080906"}


id: GO:0061781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA as part of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin unloading","termid":"GO:0061774"},{"relation_name":"part_of","term_name":"mitotic cell cycle","termid":"GO:0000278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic cohesin unloading","termid":"GO:0061781"}


id: PBO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-output_of","termid":"PBO:0017451"}


id: MOD:00114
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine methyl ester.","definition_xrefs":["Unimod:34#C-term","PubMed:11875433","PubMed:1872463","RESID:AA0105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-cysteine","termid":"MOD:01682"},{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine methyl ester","synonyms":[{"name":"2-amino-3-mercaptopropanoic methyl ester","type":"exact"},{"name":"2-amino-3-sulfanylpropanoic methyl ester","type":"exact"},{"name":"L-cysteine methyl ester","type":"exact"},{"name":"MOD_RES Cysteine methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"OMeCys","type":"exact"},{"name":"mecysteine","type":"exact"},{"name":"methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"methyl L-cysteinate","type":"exact"},{"name":"methyl esterified L-cysteine","type":"exact"}],"termid":"MOD:00114"}


id: GO:0055097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of high density lipoprotein particle.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle mediated signaling","termid":"GO:0055095"},{"relation_name":"part_of","term_name":"cellular response to high density lipoprotein particle stimulus","termid":"GO:0071403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"high density lipoprotein particle mediated signaling","synonyms":[{"name":"high density lipoprotein mediated signalling","type":"exact"},{"name":"high density lipoprotein particle mediated signal transduction","type":"exact"},{"name":"high density lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055097"}


id: GO:0008761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine.","definition_xrefs":["EC:5.1.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 2-epimerase activity","secondary_identifiers":["RHEA:17213","MetaCyc:UDPGLCNACEPIM-RXN","Reactome:R-HSA-4085021","Reactome:R-HSA-4088338"],"synonyms":[{"name":"UDP-GlcNAc-2-epimerase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine 2-epimerase activity","type":"related"},{"name":"UDP-N-acetylglucosamine 2'-epimerase activity","type":"related"},{"name":"uridine diphosphate-N-acetylglucosamine-2'-epimerase activity","type":"related"},{"name":"uridine diphospho-N-acetylglucosamine 2'-epimerase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine 2'-epimerase activity","type":"related"}],"termid":"GO:0008761"}


id: GO:1904396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:7722643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuromuscular junction development","synonyms":[{"name":"regulation of NMJ stability","type":"related"},{"name":"regulation of neuromuscular junction organization","type":"exact"},{"name":"regulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904396"}


id: PBO:0062155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 6 pseudogene","termid":"PBO:0062155"}


id: PBO:0028315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_nitrogen_starvation","termid":"PBO:0028315"}


id: PBO:0041040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 pseudogene 1","termid":"PBO:0041040"}


id: PBO:0075004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-15","termid":"PBO:0075004"}


id: PBO:0035873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_microtubule_end_during_mitotic_interphase","termid":"PBO:0035873"}


id: GO:0048847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to adenohypophysis. This process pertains to the initial formation of a structure from unspecified parts. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"adenohypophysis morphogenesis","termid":"GO:0048855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adenohypophysis formation","synonyms":[{"name":"adenophysis biosynthesis","type":"exact"},{"name":"adenophysis formation","type":"exact"},{"name":"anterior pituitary biosynthesis","type":"exact"},{"name":"anterior pituitary formation","type":"exact"},{"name":"anterior pituitary gland biosynthesis","type":"exact"},{"name":"anterior pituitary gland formation","type":"exact"}],"termid":"GO:0048847"}


id: PATO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000604 orientation value (obsolete PATO:0000604)","termid":"PATO:0000604"}


id: PBO:0063668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins 6","termid":"PBO:0063668"}


id: SO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acylated.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001721 H3K27_acylation_site (obsolete SO:0001721)","synonyms":[{"name":"H3K27 acylation site","type":"exact"},{"name":"H3K27Ac","type":"related"}],"termid":"SO:0001721"}


id: GO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"myosin II binding","termid":"GO:0045159"}


id: PBO:0064627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peter pan homolog","termid":"PBO:0064627"}


id: PBO:0070844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 23","termid":"PBO:0070844"}


id: GO:1903113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of copper ion transmembrane transporter activity.","definition_xrefs":["GOC:bhm","PMID:23122209","GOC:TermGenie","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"copper ion transmembrane transporter complex","termid":"GO:1903113"}


id: GO:0015793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glycerol across a membrane. Glycerol is 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"glycerol transmembrane transport","synonyms":[{"name":"glycerol transport","type":"broad"}],"termid":"GO:0015793"}


id: PBO:0047648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 1","termid":"PBO:0047648"}


id: GO:0018606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene-4-sulfonate + NADH + O2 + H+ = NAD+ + HSO3(-) + 4-methylcatechol.","definition_xrefs":["UM-BBD_reactionID:r0295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzenesulfonate dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"synonyms":[{"name":"benzenesulphonate dioxygenase activity","type":"exact"}],"termid":"GO:0018606"}


id: FYPO:0008109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which posttranscriptional addition of a methyl group to the 2'-oxygen atom of the adenine residue at position 64 in an U6 snRNA molecule is abolished.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished U6 2'-O-snRNA methylation","termid":"FYPO:0003621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abolished U6 2'-O-snRNA methylation at residue A64","termid":"FYPO:0008109"}


id: PBO:0027585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_homologous_chromosome_segregation","termid":"PBO:0027585"}


id: PBO:0089350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"23S rRNA/U6 snRNA (adenine-N(6))-methyltransferase Mtl16","termid":"PBO:0089350"}


id: PBO:0089714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase Qns1","termid":"PBO:0089714"}


id: GO:2000595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of optic nerve formation","synonyms":[{"name":"regulation of CN II biosynthesis","type":"related"},{"name":"regulation of CN II formation","type":"related"}],"termid":"GO:2000595"}


id: PBO:0042039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 91","termid":"PBO:0042039"}


id: PR:P41390
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An amidophosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02227","PANTHER:PTHR11907:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.08c","secondary_identifiers":["UniProtKB:P41390"],"synonyms":[{"name":"ATase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPAT","type":"exact"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41390"}


id: GO:0070343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of white fat cells by cell division, resulting in the expansion of their population.","definition_xrefs":["CL:0000448","GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"white fat cell proliferation","synonyms":[{"name":"white adipocyte proliferation","type":"exact"},{"name":"white adipose cell proliferation","type":"exact"}],"termid":"GO:0070343"}


id: PBO:0035970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4_acetylation_during_vegetative_growth","termid":"PBO:0035970"}


id: FYPO:0000069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of thiabendazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to thiabendazole","synonyms":[{"name":"resistance to TBZ","type":"exact"},{"name":"resistance to thiabendazole during mitotic cell cycle","type":"related"},{"name":"resistance to thiabendazole during vegetative growth","type":"exact"},{"name":"resistant to TBZ","type":"exact"},{"name":"resistant to thiabendazole","type":"exact"}],"termid":"FYPO:0000069"}


id: GO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the terminal bond of Xaa-Pro-Xaa motifs to release unblocked, N-terminal dipeptides from substrates including Ala-Pro-para-nitroanilide and (sequentially, at the second, fourth and sixth bonds) of the motif Tyr-Pro-Phe-Pro-Gly-Pro-Ile.","definition_xrefs":["EC:3.4.14.11"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro dipeptidyl-peptidase activity (obsolete GO:0017088)","synonyms":[{"name":"PepX","type":"related"},{"name":"X-Pro dipeptidyl-peptidase activity","type":"exact"},{"name":"X-prolyl dipeptidyl aminopeptidase activity","type":"related"},{"name":"X-prolyl dipeptidyl peptidase activity","type":"related"},{"name":"Xaa-Pro dipeptidyl-peptidase activity","type":"exact"}],"termid":"GO:0017088"}


id: PBO:0065419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 6","termid":"PBO:0065419"}


id: PBO:0064461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 2, accessory subunit","termid":"PBO:0064461"}


id: FYPO:0007216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is abolished  during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin at MCB promoters","termid":"FYPO:0005460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein localisation to chromatin at MCB promoters during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at MCB promoters during cellular response to HU","type":"exact"},{"name":"abolished protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at MCB target genes during cellular response to hydroxyurea","type":"related"},{"name":"abolished protein localization to chromatin at MCB-containing promoters during cellular response to hydroxyurea","type":"exact"},{"name":"protein localization to chromatin at MCB promoters during vegetative growth abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007216"}


id: GO:0061785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An endopeptidase activity that uses peptidoglycan as a substrate.","definition_xrefs":["GOC:jh","PMID:22748813","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"peptidoglycan endopeptidase activity","termid":"GO:0061785"}


id: PBO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside phosphorylase (predicted)","termid":"PBO:0001739"}


id: PBO:0060311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYLK antisense RNA 1","termid":"PBO:0060311"}


id: GO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenylglycerophosphocholine + acyl-CoA = 1-alkenyl-2-acylglycerophosphocholine + CoA.","definition_xrefs":["MetaCyc:2.3.1.104-RXN","EC:2.3.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"1-alkenylglycerophosphocholine O-acyltransferase activity","secondary_identifiers":["RHEA:10344","EC:2.3.1.25","MetaCyc:PLASMALOGEN-SYNTHASE-RXN"],"synonyms":[{"name":"acyl-CoA:1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"}],"termid":"GO:0047159"}


id: PBO:0041632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 2","termid":"PBO:0041632"}


id: PBO:0075804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 3, pseudogene","termid":"PBO:0075804"}


id: GO:0019472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"4-hydroxyproline metabolic process","termid":"GO:0019471"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-hydroxyproline biosynthetic process","synonyms":[{"name":"4-hydroxyproline anabolism","type":"exact"},{"name":"4-hydroxyproline biosynthesis","type":"exact"},{"name":"4-hydroxyproline formation","type":"exact"},{"name":"4-hydroxyproline synthesis","type":"exact"}],"termid":"GO:0019472"}


id: GO:0007591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic shedding of part or all of a chitin-based cuticle, which is then replaced by a new cuticle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle, chitin-based cuticle","synonyms":[{"name":"chitin-based cuticle molting cycle","type":"exact"}],"termid":"GO:0007591"}


id: GO:0042252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of a larval imaginal disc epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity of larval imaginal disc epithelium","termid":"GO:0042252"}


id: GO:0035651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AP-3 adaptor complex. The AP-3 adaptor complex is a heterotetrameric AP-type membrane coat adaptor complex that consists of beta3, delta, mu3 and sigma3 subunits and is found associated with endosomal membranes. In at least humans, the AP-3 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (beta3A and beta3B, mu3A and mu3B, and sigma3A and sigma3B).","definition_xrefs":["PMID:21097499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"AP-3 adaptor complex binding","termid":"GO:0035651"}


id: PBO:0059828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 2","termid":"PBO:0059828"}


id: PBO:0074470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMS pseudogene 1","termid":"PBO:0074470"}


id: GO:0015744
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of succinate, the dianion of ethane dicarboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"succinate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015744","terms_by_termid":{"GO:0098720":null}}


id: PR:Q09672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-methyl-2-oxobutanoate hydroxymethyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.09c","secondary_identifiers":["UniProtKB:Q09672"],"synonyms":[{"name":"Spom972h-panB","type":"exact"},{"name":"ketopantoate hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09672"}


id: PBO:0069911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1203, pseudogene","termid":"PBO:0069911"}


id: PBO:0056483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrin 3","termid":"PBO:0056483"}


id: SO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tyrosine anticodon, and a 3' tyrosine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tyrosine_tRNA_primary_transcript","termid":"SO:0000229"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl_tRNA","synonyms":[{"name":"tyrosyl tRNA","type":"exact"},{"name":"tyrosyl-transfer RNA","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000272"}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["PMID:23496142","GOC:BHF","GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: PBO:0005669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate-tRNA ligase Drs1 (predicted)","termid":"PBO:0005669"}


id: PBO:0059892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 15","termid":"PBO:0059892"}


id: PBO:0051673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 3","termid":"PBO:0051673"}


id: GO:0072260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast fate commitment","synonyms":[{"name":"metanephros interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072260"}


id: GO:0098742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that are at least partially embedded in the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}


id: PBO:0068203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 510","termid":"PBO:0068203"}


id: PATO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting an equatorial diameter greater than its polar diameter.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblate","synonyms":[{"name":"oblate spheroid","type":"exact"}],"termid":"PATO:0000409"}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: GO:0016533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has protein serine/threonine kinase activity; in mammals composed of catalytic subunit CDK5 and regulatory subunits CDK5R1 or CDK5R2. Contrary to its gene symbol, CDK5 is not cyclin-dependent.","definition_xrefs":["PMID:15689152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein kinase 5 complex","synonyms":[{"name":"cyclin-dependent protein kinase 5 holoenzyme complex","type":"related"}],"termid":"GO:0016533"}


id: GO:1902051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (25S)-Delta(4)-dafachronate.","definition_xrefs":["PMID:16529801","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"(25S)-Delta(4)-dafachronate binding","termid":"GO:1902051"}


id: PBO:0067788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 90","termid":"PBO:0067788"}


id: GO:0102976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol + NADP = versiconal hemiacetal + NADPH + H+.","definition_xrefs":["GOC:pz","EC:1.1.1.353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"versiconal reductase activity","secondary_identifiers":["MetaCyc:RXN-9491","RHEA:35699"],"termid":"GO:0102976"}


id: GO:0009404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"toxin metabolic process","synonyms":[{"name":"toxin metabolism","type":"exact"}],"termid":"GO:0009404"}


id: GO:0030644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of chloride ions within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic anion homeostasis","termid":"GO:0030002"},{"relation_name":"is_a","term_name":"chloride ion homeostasis","termid":"GO:0055064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular chloride ion homeostasis","synonyms":[{"name":"cellular chloride ion homeostasis","type":"exact"}],"termid":"GO:0030644"}


id: GO:0030620
data:
  {"annotated_genes":["SJAG_03460","SJAG_01819","SJAG_05240","SJAG_03547","SJAG_03954","SJAG_04497","SJAG_02469","SJAG_03210","SJAG_02185","SJAG_03070","SJAG_01327"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75468,76394,91431,97236,101754,103900,107915,108148,110163,111062,111600],"is_not":false,"summary":null,"term":"GO:0030620"}]},"cv_name":"molecular_function","definition":"Binding to a U2 small nuclear RNA (U2 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02185":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03460":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_04497":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"U2 snRNA binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0030620","terms_by_termid":{"GO:0030620":null}}


id: GO:0160020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:32015325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of ferroptosis","termid":"GO:0110075"},{"relation_name":"positively_regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferroptosis","termid":"GO:0160020"}


id: PBO:0029231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0029231"}


id: PBO:0058494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5689","termid":"PBO:0058494"}


id: GO:1903796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"negatively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of inorganic anion transmembrane transport","synonyms":[{"name":"down regulation of inorganic anion membrane transport","type":"exact"},{"name":"down regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"down regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"down-regulation of inorganic anion membrane transport","type":"exact"},{"name":"down-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"downregulation of inorganic anion membrane transport","type":"exact"},{"name":"downregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane inorganic anion transport","type":"exact"},{"name":"inhibition of inorganic anion membrane transport","type":"narrow"},{"name":"inhibition of inorganic anion transmembrane transport","type":"narrow"},{"name":"inhibition of transmembrane inorganic anion transport","type":"narrow"},{"name":"negative regulation of inorganic anion membrane transport","type":"exact"},{"name":"negative regulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903796"}


id: PBO:0064654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 4","termid":"PBO:0064654"}


id: PBO:0056926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase pseudogene 1","termid":"PBO:0056926"}


id: PBO:0077505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 222","termid":"PBO:0077505"}


id: FYPO:0002378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but have a greater length, diameter, and volume than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable swollen vegetative cell population (obsolete FYPO:0002378)","synonyms":[{"name":"viable enlarged vegetative cell population","type":"related"},{"name":"viable large vegetative cell population","type":"related"},{"name":"viable vegetative cell population with increased cell size","type":"related"},{"name":"viable vegetative cell population with increased cell volume","type":"exact"}],"termid":"FYPO:0002378"}


id: PBO:0067747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 46","termid":"PBO:0067747"}


id: PBO:0057309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-2","termid":"PBO:0057309"}


id: PBO:0066373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD52 motif containing 1","termid":"PBO:0066373"}


id: GO:0043254
data:
  {"annotated_genes":["SJAG_04982","SJAG_02700","SJAG_01993","SJAG_01837","SJAG_00521","SJAG_03048","SJAG_04479","SJAG_01894","SJAG_04615","SJAG_00906","SJAG_03086","SJAG_00279","SJAG_04100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75051,77998,78690,87977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[97851,111849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[86389,78234,76310,100576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[64729,71480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003400"},{"annotations":[75055,72073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein complex assembly.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00906":null,"SJAG_01837":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04615":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of protein complex assembly","type":"related"}],"termid":"GO:0043254","terms_by_termid":{"GO:0003400":null,"GO:0030833":null,"GO:0042989":null,"GO:0051016":null,"GO:1905561":null}}


id: PBO:0069395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 655, pseudogene","termid":"PBO:0069395"}


id: PBO:0067330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 422, pseudogene","termid":"PBO:0067330"}


id: PBO:0048004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 4B","termid":"PBO:0048004"}


id: PBO:0081107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 1","termid":"PBO:0081107"}


id: MOD:00990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00990"}


id: PBO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 autosomal homolog 1","termid":"PBO:0048135"}


id: GO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the atrioventricular valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve formation","synonyms":[{"name":"AV valve formation","type":"exact"}],"termid":"GO:0003190"}


id: GO:0043178
data:
  {"annotated_genes":["SJAG_02591","SJAG_03362","SJAG_00233","SJAG_04131","SJAG_03325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99026,71942,96818,86319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000822"},{"annotations":[95049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"}]},"cv_name":"molecular_function","definition":"Binding to an alcohol, any of a class of alkyl compounds containing a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_02591":null,"SJAG_03325":null,"SJAG_03362":null,"SJAG_04131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alcohol binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0043178","terms_by_termid":{"GO:0000822":null,"GO:0030975":null}}


id: PBO:0071262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 7","termid":"PBO:0071262"}


id: PBO:0091999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1 Rpp103","termid":"PBO:0091999"}


id: GO:0003192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the mitral valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve formation","termid":"GO:0003190"},{"relation_name":"part_of","term_name":"mitral valve morphogenesis","termid":"GO:0003183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitral valve formation","termid":"GO:0003192"}


id: GO:0018467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formaldehyde + H2O + NAD+ = formate + 2 H+ + NADH.","definition_xrefs":["RHEA:16425","EC:1.2.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formaldehyde dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00604","UM-BBD_reactionID:r0240","MetaCyc:FORMALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"formaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"glutathione-independent formaldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0018467"}


id: PBO:0074253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO1B3-SLCO1B7 readthrough","termid":"PBO:0074253"}


id: FYPO:0004428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic cytokinesis is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of cytokinesis","synonyms":[{"name":"increased rate of cytokinesis during mitotic cell cycle","type":"related"},{"name":"increased rate of cytokinesis during vegetative growth","type":"exact"},{"name":"increased rate of mitotic cytokinesis","type":"exact"}],"termid":"FYPO:0004428"}


id: PBO:0074687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 67","termid":"PBO:0074687"}


id: PBO:0076099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 5","termid":"PBO:0076099"}


id: FYPO:0004586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of caffeine and hydroxyurea. Cells stop growing (and may die) at concentrations of caffeine and hydroxyurea that allow wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:10757807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to caffeine and hydroxyurea","synonyms":[{"name":"hypersensitive to caffeine and hydroxyurea","type":"exact"},{"name":"sensitive to caffeine and HU","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea during mitotic cell cycle","type":"related"},{"name":"sensitive to caffeine and hydroxyurea during vegetative growth","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea in combination","type":"exact"}],"termid":"FYPO:0004586"}


id: PBO:0083642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile patch structures at the cell cortex associated with endocytosis; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family","termid":"PBO:0083642"}


