# terms

id: GO:1904914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:26586433","GO_REF:0000058","GOC:BHF_telomere","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of establishment of protein-containing complex localization to telomere","termid":"GO:1904913"},{"relation_name":"negatively_regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"down regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"inhibition of establishment of macromolecular complex localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of macromolecular complex localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"negative regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904914"}


id: MOD:01107
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to O5-benzyl-L-glutamate.","definition_xrefs":["DeltaMass:258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O5-benzyl-L-glutamate","termid":"MOD:01107"}


id: GO:0035602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands, which stops, prevents, or reduces the frequency, rate or extent of the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"negative regulation of apoptotic process in bone marrow cell","termid":"GO:0071866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"FGF receptor signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"exact"},{"name":"FGFR signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in negative regulation of apoptotic process in bone marrow","type":"exact"}],"termid":"GO:0035602"}


id: PATO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000514 intolerant value (obsolete PATO:0000514)","termid":"PATO:0000514"}


id: SO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-functional descendant of a functional entity.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_region","synonyms":[{"name":"pseudogenic region","type":"exact"}],"termid":"SO:0000462"}


id: PBO:0035840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein-protein_interaction_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0035840"}


id: PBO:0088536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20","termid":"PBO:0088536"}


id: GO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:19345326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K27-linked ubiquitination","synonyms":[{"name":"protein K27-linked polyubiquitination","type":"exact"}],"termid":"GO:0044314"}


id: GO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the protoxylem over time, from its formation to the mature structure. The protoxylem comprises the first formed elements of the primary xylem.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoxylem development","termid":"GO:0090059"}


id: GO:0000249
data:
  {"annotated_genes":["SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87161],"is_not":false,"summary":null,"term":"GO:0000249"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of the C-22(23) double bond in the sterol side chain. An example reaction: 5,7,24(28)-ergostatrienol + O2 + NADPH = 5,7,22,24(28)-ergostatetraenol + 2 H2O + NADP+.","definition_xrefs":["MetaCyc:RXN3O-227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"},{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"C-22 sterol desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000249","terms_by_termid":{"GO:0000249":null}}


id: FYPO:0001047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell proceeds through the mitotic metaphase/anaphase transition in the presence of an uncorrected problem (such as chromosome structure or kinetochore attachment), and as a result undergoes abnormal nuclear division and subsequently dies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe (obsolete FYPO:0001047)","synonyms":[{"name":"mitotic catastrophe during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe during vegetative growth","type":"exact"}],"termid":"FYPO:0001047"}


id: PBO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 4","termid":"PBO:0048083"}


id: GO:1902354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any blood vessel endothelial cell delamination that is involved in blood vessel lumen ensheathment.","definition_xrefs":["GOC:TermGenie","PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell delamination","termid":"GO:0097497"},{"relation_name":"part_of","term_name":"blood vessel lumen ensheathment","termid":"GO:0097496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"blood vessel endothelial cell delamination involved in blood vessel lumen ensheathment","termid":"GO:1902354"}


id: PBO:0018157
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspers-Huttenlocher Syndrome","termid":"PBO:0018157"}


id: PBO:0109364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 2B","termid":"PBO:0109364"}


id: GO:0008949
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + oxalyl-CoA = CO2 + formyl-CoA.","definition_xrefs":["EC:4.1.1.8","RHEA:19333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxalyl-CoA decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01908","MetaCyc:OXALYL-COA-DECARBOXYLASE-RXN"],"synonyms":[{"name":"oxalyl coenzyme A decarboxylase activity","type":"related"},{"name":"oxalyl-CoA carboxy-lyase (formyl-CoA-forming)","type":"related"},{"name":"oxalyl-CoA carboxy-lyase activity","type":"related"}],"termid":"GO:0008949"}


id: GO:1902058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23480775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive fruiting body development","termid":"GO:0031155"},{"relation_name":"regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"regulation of ascus development","type":"narrow"},{"name":"regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"regulation of perfect stage fruiting body development","type":"narrow"}],"termid":"GO:1902058"}


id: GO:0031990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mRNA from the nucleus to the cytoplasm during a heat stimulus, a temperature stimulus above the optimal temperature for the organism; in particular, a process that enables an organism withstand exposure to temperatures that would otherwise lethally impair poly(A)+ mRNA-nucleus export.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA export from nucleus","termid":"GO:0006406"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051179","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"mRNA export from nucleus in response to heat stress","synonyms":[{"name":"mRNA export from cell nucleus during heat stress","type":"exact"},{"name":"mRNA export from nucleus during heat stress","type":"related"}],"termid":"GO:0031990"}


id: GO:0033264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of limited hydrolysis of proteins of the neuroexocytosis apparatus, synaptobrevins, SNAP25 or syntaxin. No detected action on small molecule substrates.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bontoxilysin activity (obsolete GO:0033264)","synonyms":[{"name":"BoNT","type":"related"},{"name":"bontoxilysin activity","type":"exact"},{"name":"botulinum neurotoxin activity","type":"exact"}],"termid":"GO:0033264"}


id: PBO:0083826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; poly (A) mRNA binding subunit which recruits mRNA to the complex; the Pan2p-Pan3p complex controls poly(A) tail length and regulates the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0083826"}


id: PBO:0053903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1193","termid":"PBO:0053903"}


id: PBO:0059362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 9","termid":"PBO:0059362"}


id: PBO:0041569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 173","termid":"PBO:0041569"}


id: PBO:0027822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_single-stranded_DNA_binding","termid":"PBO:0027822"}


id: GO:1902200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"3-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-methylbut-2-enoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"3-methylbut-2-enoyl-CoA(4-) anabolism","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) formation","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902200"}


id: GO:0106296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of resolvin family D-series, hydroxy fatty acids derived from docosahexaenoic acid.","definition_xrefs":["PMID:12391014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resolvin biosynthetic process","termid":"GO:0106295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"D-series resolvin biosynthetic process","termid":"GO:0106296"}


id: FYPO:0004757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation","synonyms":[{"name":"DNA re-replication","type":"related"},{"name":"DNA replication defects, endoreduplication","type":"related"},{"name":"DNA rereplication","type":"related"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004757"}


id: PBO:0071650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 14","termid":"PBO:0071650"}


id: PBO:0062807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 7","termid":"PBO:0062807"}


id: GO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of pericentric heterochromatin formation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of pericentric heterochromatin formation","termid":"GO:0090052"},{"relation_name":"positively_regulates","term_name":"pericentric heterochromatin formation","termid":"GO:0031508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325","GO:0044085"],"is_obsolete":false,"name":"positive regulation of pericentric heterochromatin formation","synonyms":[{"name":"positive regulation of chromatin silencing at centromere","type":"exact"},{"name":"positive regulation of pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0090053"}


id: PBO:0065687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary tumor-transforming 3, pseudogene","termid":"PBO:0065687"}


id: GO:0015314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + aminotriazole(in) = H+(in) + aminotriazole(out).","definition_xrefs":["TC:2.A.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"aminotriazole transmembrane transporter activity","termid":"GO:1901478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"aminotriazole:proton antiporter activity","synonyms":[{"name":"aminotriazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015314"}


id: GO:0019035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleoprotein complex containing viral genetic material and the viral integrase, required for genome integration into the host's genome. May contain other proteins.","definition_xrefs":["PMID:2721960","PMID:29900498","PMID:21037296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"host cell","termid":"GO:0043657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral integration complex","secondary_identifiers":["Wikipedia:Pre-integration_complex"],"synonyms":[{"name":"PIC","type":"broad"},{"name":"pre-integration complex","type":"exact"}],"termid":"GO:0019035"}


id: FYPO:0007667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is decreased.","definition_xrefs":["PMID:9606213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to shmoo tip","synonyms":[{"name":"increased protein localisation to shmoo tip","type":"exact"},{"name":"increased protein localization to mating projection tip","type":"exact"}],"termid":"FYPO:0007667"}


id: PBO:0082744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Ldb7p, and Htl1p to form a module important for a broad range of RSC functions","termid":"PBO:0082744"}


id: PBO:0032715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032715"}


id: PBO:0049446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucoside xylosyltransferase 1","termid":"PBO:0049446"}


id: PBO:0027645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_aseptate_vegetative_cell","termid":"PBO:0027645"}


id: PBO:0071839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 34","termid":"PBO:0071839"}


id: PBO:0040197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 10","termid":"PBO:0040197"}


id: PBO:0039830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-fifty homeobox pseudogene 1","termid":"PBO:0039830"}


id: PBO:0054040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1376","termid":"PBO:0054040"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: GO:0008864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + H2O = (6S)-5,6,7,8-tetrahydrofolate + formate + H+.","definition_xrefs":["EC:3.5.1.10","RHEA:19833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"formyltetrahydrofolate deformylase activity","secondary_identifiers":["MetaCyc:FORMYLTHFDEFORMYL-RXN","KEGG_REACTION:R00944"],"synonyms":[{"name":"10-formyltetrahydrofolate amidohydrolase activity","type":"related"},{"name":"formyl-FH(4) hydrolase activity","type":"related"},{"name":"formyltetrahydrofolate hydrolase activity","type":"related"}],"termid":"GO:0008864"}


id: PATO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having medium brightness and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark pale pink","secondary_identifiers":["PATO:0001279"],"synonyms":[{"name":"bright pink ","type":"related"}],"termid":"PATO:0001280"}


id: GO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an L-amino acid + an L-amino acid = ADP + phosphate + L-aminoacyl-L-amino acid.","definition_xrefs":["EC:6.3.2.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-amino-acid alpha-ligase activity","secondary_identifiers":["MetaCyc:RXN-16296","RHEA:44332"],"synonyms":[{"name":"L-amino acid alpha-ligase activity","type":"exact"},{"name":"L-amino acid ligase activity","type":"exact"},{"name":"YwfE","type":"related"},{"name":"bacilysin synthetase activity","type":"exact"}],"termid":"GO:0034026"}


id: PBO:0046654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"establishment of sister chromatid cohesion N-acetyltransferase 1","termid":"PBO:0046654"}


id: PR:O74635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01964","PANTHER:PTHR11239:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.04c","secondary_identifiers":["UniProtKB:O74635"],"synonyms":[{"name":"DNA-directed RNA polymerase II 13.2 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase II subunit 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2I","type":"exact"}],"termid":"PR:O74635"}


id: GO:0031223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism in response to a sound.","definition_xrefs":["GOC:pr","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory behavior","termid":"GO:0007638"},{"relation_name":"part_of","term_name":"response to auditory stimulus","termid":"GO:0010996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory behavior","synonyms":[{"name":"auditory behaviour","type":"exact"},{"name":"behavioral response to sound","type":"exact"},{"name":"behavioural response to sound","type":"exact"}],"termid":"GO:0031223"}


id: PBO:0087637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the eukaryotic translation initiation factor 3 (eIF3); component of unknown function; deletion causes defects in mitochondrial organization but not in growth or translation initiation; can rescue cytokinesis and mitochondrial organization defects of the Dictyostelium cluA- mutant; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0087637"}


id: FYPO:0006989
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114396,114397],"is_not":false,"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[114389],"is_not":false,"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type) at transposable elements.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"normal histone H3-K9 dimethylation at transposable element during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at transposon during vegetative growth","type":"exact"},{"name":"normal histone H3K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at transposable element during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006989","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: GO:0007454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the labial disc are generated and organized. This includes the transformation of a labial imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including parts of the proboscis.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"labial disc development","termid":"GO:0035217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labial disc morphogenesis","synonyms":[{"name":"labial disc metamorphosis","type":"exact"}],"termid":"GO:0007454"}


id: PR:Q9HDU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylgalactosamine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04144","PANTHER:PTHR10457:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.13","secondary_identifiers":["UniProtKB:Q9HDU2"],"synonyms":[{"name":"Spom972h-GALK2","type":"exact"},{"name":"galactose kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU2"}


id: GO:1902416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA binding.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:22890846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA binding","termid":"GO:1902415"},{"relation_name":"is_a","term_name":"positive regulation of RNA binding","termid":"GO:1905216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA binding","synonyms":[{"name":"activation of mRNA binding","type":"narrow"},{"name":"up regulation of mRNA binding","type":"exact"},{"name":"up-regulation of mRNA binding","type":"exact"},{"name":"upregulation of mRNA binding","type":"exact"}],"termid":"GO:1902416"}


id: PR:O42845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23A1.07 gene.","definition_xrefs":["UniProtKB:O42845","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C23A1.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.07","synonyms":[{"name":"Spom972h-SPAC23A1.07","type":"exact"}],"termid":"PR:O42845"}


id: PBO:0046644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 25","termid":"PBO:0046644"}


id: PBO:0071208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 49","termid":"PBO:0071208"}


id: GO:0016491
data:
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id: PBO:0076284
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id: GO:0047445
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id: GO:1900161
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id: FYPO:0003101
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id: PBO:0003537
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id: GO:0009466
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id: GO:0043694
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id: PBO:0001322
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id: PBO:0075629
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id: PBO:0058438
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id: PBO:0083689
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id: PBO:0001271
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id: PBO:0056131
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id: PBO:0073580
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id: GO:0070229
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id: PBO:0066644
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id: PBO:0073468
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id: GO:0070740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glutamate residues to the gamma-carboxyl group(s) of one or more specific glutamate residues on a tubulin molecule.","definition_xrefs":["PMID:19524510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tubulin-glutamic acid ligase activity","secondary_identifiers":["Reactome:R-HSA-8865774","Reactome:R-HSA-8955869","EC:6.3.2.61"],"synonyms":[{"name":"tubulin glutamylase activity","type":"exact"},{"name":"tubulin-glutamate ligase activity","type":"exact"}],"termid":"GO:0070740"}


id: GO:0060518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells from one site to another contributing to the elongation of the primary prostatic bud.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"primary prostatic bud elongation","termid":"GO:0060516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in prostatic bud elongation","termid":"GO:0060518"}


id: GO:0102363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoscopoletin + S-adenosyl-L-methionine = scoparone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"isoscopoletin-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13475"],"termid":"GO:0102363"}


id: PBO:0088643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein Bcd1","termid":"PBO:0088643"}


id: GO:1990727
data:
  {"annotated_genes":["SJAG_01526","SJAG_02672","SJAG_04074"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89131,92139,97918],"is_not":false,"summary":null,"term":"GO:1990727"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in tubulin alpha-beta-subunit folding assembly consisting of beta-tubulin-TFC-D, alpha-tubulin-TFC-E and TFC-C, through which tubulin subunit association and dimer release occur.","definition_xrefs":["PMID:12445400","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01526":null,"SJAG_02672":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tubulin folding cofactor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990727","terms_by_termid":{"GO:1990727":null}}


id: PBO:0003469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase homolog Chs2","termid":"PBO:0003469"}


id: FYPO:0004555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize choline, and therefore requires choline in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for choline","synonyms":[{"name":"choline auxotrophy","type":"exact"},{"name":"growth auxotrophic for choline during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for choline during vegetative growth","type":"exact"}],"termid":"FYPO:0004555"}


id: GO:0050009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + propan-2-ol = acetone + H+ + NADPH.","definition_xrefs":["RHEA:21792","EC:1.1.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isopropanol dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:ISOPROPANOL-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01550"],"synonyms":[{"name":"propan-2-ol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050009"}


id: PBO:0062729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 3 pseudogene","termid":"PBO:0062729"}


id: GO:0019080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a viral gene is converted into a mature gene product or products (proteins or RNA). This includes viral transcription, processing to produce a mature RNA product, and viral translation.","definition_xrefs":["GOC:bf","ISBN:0121585336","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral gene expression","synonyms":[{"name":"viral genome expression","type":"exact"}],"termid":"GO:0019080"}


id: PBO:0066349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras converting CAAX endopeptidase 1","termid":"PBO:0066349"}


id: PBO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase, spermatogenic","termid":"PBO:0048367"}


id: GO:0034110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"}


id: GO:0019399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclohexanol metabolic process in which cyclohexanol is converted to adipate.","definition_xrefs":["MetaCyc:CYCLOHEXANOL-OXIDATION-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohexanol metabolic process","termid":"GO:0018891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclohexanol oxidation","termid":"GO:0019399"}


id: PBO:0068401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF217 antisense RNA 1 (head to head)","termid":"PBO:0068401"}


id: MOD:01635
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine removal","termid":"MOD:01635"}


id: PBO:0079089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-2","termid":"PBO:0079089"}


id: GO:0015527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerol phosphate(out) + inorganic phosphate(in) = glycerol phosphate(in) + inorganic phosphate(out).","definition_xrefs":["TC:2.A.1.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:inorganic phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycerol-phosphate:inorganic phosphate antiporter activity","termid":"GO:0015527"}


id: MOD:01592
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.199-304.206 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}


id: GO:0090172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins that contributes to chromosomal pairing and precedes synapsis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule cytoskeleton organization involved in homologous chromosome segregation (obsolete GO:0090172)","synonyms":[{"name":"microtubule cytoskeleton organisation involved in homologous chromosome segregation","type":"exact"},{"name":"microtubule organization involved in chromosome pairing","type":"exact"}],"termid":"GO:0090172"}


id: GO:1904818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a visceral peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:dph","GOC:TermGenie","PMID:15840053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral peritoneum development","termid":"GO:1904818"}


id: PBO:0072724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor like tyrosine kinase","termid":"PBO:0072724"}


id: PBO:0063158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 4","termid":"PBO:0063158"}


id: GO:0033837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + an anthocyanin = UDP + an anthocyanin 3'-O-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"anthocyanin 3'-O-beta-glucosyltransferase activity","secondary_identifiers":["RHEA:35627","MetaCyc:RXN-8231"],"synonyms":[{"name":"3'GT","type":"related"},{"name":"UDP-glucose:anthocyanin 3'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:anthocyanin 3'-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0033837"}


id: PBO:0044926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase delta","termid":"PBO:0044926"}


id: GO:0046303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-nitropropane, a clear, colorless liquid with a mild, fruity odor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-nitropropane biosynthetic process (obsolete GO:0046303)","synonyms":[{"name":"2-nitropropane anabolism","type":"exact"},{"name":"2-nitropropane biosynthesis","type":"exact"},{"name":"2-nitropropane biosynthetic process","type":"exact"},{"name":"2-nitropropane formation","type":"exact"},{"name":"2-nitropropane synthesis","type":"exact"}],"termid":"GO:0046303"}


id: MOD:01256
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to 3-methyl-S-(2-sulfanylethyl)cysteine.","definition_xrefs":["Unimod:200#T","PubMed:11507762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-ethanedithiol modified residue","termid":"MOD:00553"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-S-(2-sulfanylethyl)cysteine (Thr)","synonyms":[{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"},{"name":"beta-methyl-S-(2-mercaptoethyl)cysteine","type":"exact"}],"termid":"MOD:01256"}


id: PBO:0084408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lyso-phosphatidylcholine acyltransferase; required for normal phospholipid content of mitochondrial membranes; major determinant of the final acyl chain composition of the mitochondrial-specific phospholipid cardiolipin; mutations in human ortholog tafazzin (TAZ) cause Barth syndrome, a rare X-linked disease characterized by skeletal and cardiomyopathy and bouts of cyclic neutropenia; a specific splice variant of human TAZ can complement yeast null mutant","termid":"PBO:0084408"}


id: GO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroneopterin 3'-triphosphate = 6-pyruvoyl-5,6,7,8-tetrahydropterin + H+ + triphosphate.","definition_xrefs":["EC:4.2.3.12","RHEA:22048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin synthase activity","secondary_identifiers":["KEGG_REACTION:R04286","MetaCyc:4.2.3.12-RXN","Reactome:R-HSA-1474184"],"synonyms":[{"name":"2-amino-4-oxo-6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydroxypteridine triphosphate lyase activity","type":"related"},{"name":"2-amino-4-oxo-6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydroxypteridine triphosphate-lyase (6-pyruvoyl-5,6,7,8-tetrahydropterin-forming)","type":"related"},{"name":"6-pyruvoyl tetrahydrobiopterin synthase activity","type":"related"},{"name":"PTPS activity","type":"related"}],"termid":"GO:0003874"}


id: GO:0009101
data:
  {"annotated_genes":["SJAG_03676","SJAG_04952","SJAG_02163","SJAG_01491","SJAG_02903","SJAG_00924","SJAG_02519","SJAG_03188","SJAG_03330","SJAG_03555","SJAG_04090","SJAG_00437","SJAG_03764","SJAG_00747","SJAG_04363","SJAG_00831","SJAG_01069","SJAG_04728","SJAG_03056","SJAG_02648","SJAG_03871","SJAG_00183","SJAG_03790","SJAG_03032","SJAG_04316","SJAG_01021","SJAG_03311","SJAG_04821","SJAG_00554","SJAG_01264","SJAG_01595","SJAG_00816","SJAG_04906","SJAG_04231","SJAG_02102","SJAG_02056","SJAG_03149","SJAG_04053","SJAG_03333","SJAG_05348","SJAG_03774","SJAG_05219","SJAG_04770","SJAG_03535","SJAG_01276","SJAG_03082","SJAG_03656","SJAG_00598","SJAG_00334","SJAG_04571","SJAG_00394","SJAG_00890","SJAG_04954","SJAG_02996","SJAG_03150","SJAG_01950","SJAG_04127","SJAG_04095","SJAG_01006","SJAG_04401","SJAG_01389","SJAG_01972","SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76420,76976,83305,99538,76121,78906,74330,71919,78070,74133,88671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[101369,88672],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044845"},{"annotations":[97772,100411,93899,106376,93951,95521,107819,71336,104632,86815,89534,74471,95504,99015,111912,83306],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[91313,71959,74872,112947,103746,98538,109208],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006486"},{"annotations":[112460,76034,74328,73178,76119,77095,77678,76975,71641,78527,99222,106015,74132,77734,83185,74800,75131,76419,93347,78068,102115,70241,71298,71918,75445,113613,78905,70737,95541,78496,106021],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006487"},{"annotations":[104635,74002,77655,77941,78120,106377,75683],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0018279"},{"annotations":[113163,78272,76120,106016,106022,78069],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006493"},{"annotations":[92012,99539,113473,88673,99223,99954,97041,102116],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00890":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"glycoprotein anabolism","type":"exact"},{"name":"glycoprotein biosynthesis","type":"exact"},{"name":"glycoprotein formation","type":"exact"},{"name":"glycoprotein synthesis","type":"exact"}],"termid":"GO:0009101","terms_by_termid":{"GO:0000032":null,"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null,"GO:0044845":null}}


id: PBO:0091641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Grt1","termid":"PBO:0091641"}


id: GO:1900457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["PMID:21855796","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"regulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900457"}


id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: PBO:0078863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 7","termid":"PBO:0078863"}


id: MOD:00789
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.","definition_xrefs":["PubMed:15602776","Unimod:364","URL:http://www.serva.de/products/sheets/39230-E.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:00789"}


id: GO:0016412
data:
  {"annotated_genes":["SJAG_05413","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75369,86931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to an oxygen atom on the serine molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04305":null,"SJAG_05413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"serine O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:2.3.1.30"],"termid":"GO:0016412","terms_by_termid":{"GO:0009001":null}}


id: FYPO:0005154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the mat2P silent mating-type cassette is decreased.","definition_xrefs":["PMID:18354497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin at silent mating-type cassette","termid":"FYPO:0003573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin at mat2P silent mating-type cassette","synonyms":[{"name":"decreased protein localisation to heterochromatin at mat2P silent mating-type cassette","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P mating-type region heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P silent mating-type region","type":"exact"},{"name":"decreased protein localization to mat2P silent mating type cassette heterochromatin","type":"exact"},{"name":"decreased protein localization to mat2P silent mating-type cassette heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mat2P silent mating-type cassette heterochromatin during vegetative growth","type":"exact"},{"name":"reduced protein localization to heterochromatin at mat2P silent mating-type cassette","type":"exact"}],"termid":"FYPO:0005154"}


id: FYPO:0006930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to butylated hydroxyanisole (BHA). Cells stop growing (and may die) at a concentration of butylated hydroxyanisole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to butylated hydroxyanisole","synonyms":[{"name":"hypersensitive to butylated hydroxyanisole","type":"exact"},{"name":"sensitive to BHA","type":"exact"},{"name":"sensitive to butylated hydroxyanisole during mitotic cell cycle","type":"related"},{"name":"sensitive to butylated hydroxyanisole during vegetative growth","type":"exact"}],"termid":"FYPO:0006930"}


id: GO:0061479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reverse transcriptase inhibitor stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reverse transcriptase inhibitor","termid":"GO:0061479"}


id: GO:0009036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates and 3' hydroxyls. Cleavage is dependent on the presence in the DNA of a specific recognition site; cleavage occurs at or very near this recognition site.","definition_xrefs":["EC:3.1.21.4","PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"type II site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.4-RXN"],"synonyms":[{"name":"type II restriction enzyme activity","type":"exact"}],"termid":"GO:0009036"}


id: PBO:0077535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 248","termid":"PBO:0077535"}


id: FYPO:0007519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA occupies a normal (i.e. indistinguishable from wild type) portion of the total nuclear volume. The nuclear volume itself is also normal.","definition_xrefs":["PomBase:mah","PMID:33153481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA volume","synonyms":[{"name":"normal DNA volume during mitotic cell cycle","type":"related"},{"name":"normal DNA volume during vegetative growth","type":"exact"}],"termid":"FYPO:0007519"}


id: GO:0018814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (trans)-phenylacetaldoxime = H2O + phenylacetonitrile.","definition_xrefs":["PMID:25015725","RHEA:20069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylacetaldoxime dehydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0697","EC:4.8.1.4","KEGG_REACTION:R07638","MetaCyc:4.99.1.7-RXN"],"synonyms":[{"name":"(Z)-phenylacetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"PAOx dehydratase activity","type":"related"},{"name":"arylacetaldoxime dehydratase activity","type":"exact"}],"termid":"GO:0018814"}


id: GO:0035265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function.","definition_xrefs":["ISBN:0721662544","GOC:bf","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ growth","termid":"GO:0035265"}


id: GO:0033433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"AUU codon-amino acid adaptor activity","synonyms":[{"name":"ATT codon-amino acid adaptor activity","type":"exact"},{"name":"isoleucine tRNA","type":"related"}],"termid":"GO:0033433"}


id: PBO:0078574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51H, pseudogene","termid":"PBO:0078574"}


id: PBO:0061290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 2","termid":"PBO:0061290"}


id: PBO:0086854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; associates with mRNAs encoding cell wall proteins in high-throughput studies; deletion mutants display increased sensitivity to some cell wall disrupting agents; expression negatively regulated by cAMP","termid":"PBO:0086854"}


id: PBO:0078335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-7","termid":"PBO:0078335"}


id: PBO:0042789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164","termid":"PBO:0042789"}


id: PBO:0002537
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of proteasome","termid":"PBO:0002537"}


id: PBO:0068702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 83, pseudogene","termid":"PBO:0068702"}


id: PBO:0079036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 5-1","termid":"PBO:0079036"}


id: GO:0051472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucosylglycerol metabolic process","synonyms":[{"name":"glucosylglycerol metabolism","type":"exact"}],"termid":"GO:0051472"}


id: PBO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M pseudogene 2","termid":"PBO:0050441"}


id: GO:0036420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of mycolate outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"mycolate outer membrane","termid":"GO:0036407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of mycolate outer membrane","synonyms":[{"name":"extrinsic to MOM","type":"exact"},{"name":"extrinsic to mycolate outer membrane","type":"narrow"},{"name":"extrinsic to mycomembrane","type":"exact"}],"termid":"GO:0036420"}


id: GO:0016429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methyladenine.","definition_xrefs":["EC:2.1.1.36"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (adenine-N1)-methyltransferase activity (obsolete GO:0016429)","synonyms":[{"name":"1-methyladenine transfer RNA methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-1-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-N1-)-methyltransferase activity","type":"related"},{"name":"adenine-1-methylase activity","type":"related"},{"name":"tRNA (adenine-N1-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA (adenine-1) methyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenine 1-methyltransferase activity","type":"related"}],"termid":"GO:0016429"}


id: GO:0006955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.","definition_xrefs":["GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response","termid":"GO:0006955"}


id: PBO:0005265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1 (predicted)","termid":"PBO:0005265"}


id: PBO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_dependent_on","termid":"PBO:0000011"}


id: PBO:0003779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk23","termid":"PBO:0003779"}


id: PBO:0071280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 3","termid":"PBO:0071280"}


id: PBO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 3","termid":"PBO:0060849"}


id: PBO:0077047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRAP3 pseudogene 2","termid":"PBO:0077047"}


id: PBO:0056923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis regulator for oocyte development","termid":"PBO:0056923"}


id: GO:0160038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a somatic sensory system over time from its formation to the mature structure. Somatic sensory system is the sensory system for the sense of touch and pain.","definition_xrefs":["PMID:31399790","PMID:25832476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system development","termid":"GO:0048880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic sensory system development","synonyms":[{"name":"somatosensory system development","type":"exact"}],"termid":"GO:0160038"}


id: PBO:0076119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 3","termid":"PBO:0076119"}


id: GO:0034540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-monobromobisphenol A + 2 H+ + 2 e- = bisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-monobromobisphenol A reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0034540"}


id: GO:0047564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxycyclohexanone + A = AH(2) + cyclohexane-1,3-dione.","definition_xrefs":["EC:1.1.99.26","RHEA:15905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxycyclohexanone dehydrogenase activity","secondary_identifiers":["MetaCyc:3-HYDROXYCYCLOHEXANONE-DEHYDROGENASE-RXN","KEGG_REACTION:R03212"],"synonyms":[{"name":"3-hydroxycyclohexanone:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047564"}


id: GO:0015742
data:
  {"annotated_genes":["SJAG_00522","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71629],"is_not":false,"summary":null,"term":"GO:0015742"},{"annotations":[92148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The directed movement of alpha-ketoglutarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"alpha-ketoglutarate transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"2-oxoglutarate transport","type":"exact"},{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015742","terms_by_termid":{"GO:0015742":null,"GO:1990550":null}}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: PBO:0004323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf22","termid":"PBO:0004323"}


id: PBO:0049357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 15","termid":"PBO:0049357"}


id: GO:0032977
data:
  {"annotated_genes":["SJAG_02065","SJAG_01940","SJAG_01240","SJAG_01178","SJAG_02361","SJAG_03633","SJAG_05302","SJAG_02437","SJAG_00277","SJAG_00569","SJAG_05300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73913,77382,77525,83745,90445,98956,105723,106297,107075,107522,109365],"is_not":false,"summary":null,"term":"GO:0032977"}]},"cv_name":"molecular_function","definition":"Binds transmembrane domain-containing proteins and mediates their integration into a membrane.","definition_xrefs":["PMID:14739936","PMID:30415835","PMID:29809151","PMID:32459176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00277":null,"SJAG_00569":null,"SJAG_01178":null,"SJAG_01240":null,"SJAG_01940":null,"SJAG_02065":null,"SJAG_02361":null,"SJAG_02437":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104","GO:0140597"],"is_obsolete":false,"name":"membrane insertase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-1307803","Reactome:R-HSA-1299482","Reactome:R-HSA-1268025"],"termid":"GO:0032977","terms_by_termid":{"GO:0032977":null}}


id: FYPO:0006736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of tschimganine. Normally, wild-type cell populations survive longer in the presence of tschimganine than in its absence.","definition_xrefs":["PMID:29900664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"stationary phase viability unaffected by tschimganine","synonyms":[{"name":"chronological lifespan unaffected by tschimganine","type":"related"},{"name":"loss of chronological lifespan extension by tschimganine","type":"related"},{"name":"loss of stationary phase viability extension in presence of tschimganine","type":"exact"},{"name":"stationary phase viability unaffected by TMN","type":"exact"}],"termid":"FYPO:0006736"}


id: PBO:0062437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 101 pseudogene","termid":"PBO:0062437"}


id: PATO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000199 relative consumption (obsolete PATO:0000199)","termid":"PATO:0000199"}


id: PBO:0005820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil DNA N-glycosylase Thp1","termid":"PBO:0005820"}


id: GO:0034658
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84198],"is_not":false,"summary":null,"term":"GO:0034658"}]},"cv_name":"molecular_function","definition":"Enables the transfer of isopropylmalate from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"isopropylmalate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034658","terms_by_termid":{"GO:0034658":null}}


id: PBO:0063766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate regulating endopeptidase X-linked","termid":"PBO:0063766"}


id: GO:1901586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of acid-sensing ion channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of acid-sensing ion channel activity (obsolete GO:1901586)","synonyms":[{"name":"down regulation of ASIC activity","type":"exact"},{"name":"down regulation of acid-sensing ion channel activity","type":"exact"},{"name":"down-regulation of ASIC activity","type":"exact"},{"name":"down-regulation of acid-sensing ion channel activity","type":"exact"},{"name":"downregulation of ASIC activity","type":"exact"},{"name":"downregulation of acid-sensing ion channel activity","type":"exact"},{"name":"inhibition of ASIC activity","type":"exact"},{"name":"inhibition of acid-sensing ion channel activity","type":"narrow"},{"name":"negative regulation of ASIC activity","type":"exact"}],"termid":"GO:1901586"}


id: GO:0001666
data:
  {"annotated_genes":["SJAG_04018","SJAG_01150","SJAG_00221","SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112148,96724,106992,105180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to hypoxic stress","type":"exact"},{"name":"response to intermittent hypoxia","type":"narrow"},{"name":"response to lowered oxygen tension","type":"exact"},{"name":"response to sustained hypoxia","type":"narrow"}],"termid":"GO:0001666","terms_by_termid":{"GO:0071456":null}}


id: FYPO:0006054
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114184,114187],"is_not":false,"summary":null,"term":"FYPO:0006054"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"lipid droplets present in decreased numbers","termid":"FYPO:0002552"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased lipid droplet formation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763"],"single_locus_genotype_uniquenames":["ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased lipid droplet assembly","type":"exact"},{"name":"decreased lipid particle formation","type":"exact"},{"name":"reduced lipid droplet formation","type":"exact"}],"termid":"FYPO:0006054","terms_by_termid":{"FYPO:0006054":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0064425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 3","termid":"PBO:0064425"}


id: GO:0140958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a miRNA is targeted for degradation by a non-coding RNA or mRNA. The binding of an RNA to a target miRNA within a RISC complex results in either ubiquitin-mediated degradation of AGO protein or the displacement of the 3' end of the miRNA, exposing it to nucleases.","definition_xrefs":["PMID:33184237","PMID:36150386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA catabolic process","termid":"GO:0010587"},{"relation_name":"is_a","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"},{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0010467","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"target-directed miRNA degradation","synonyms":[{"name":"TDMD","type":"exact"},{"name":"target-directed microRNA degradation","type":"exact"}],"termid":"GO:0140958"}


id: GO:0102551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans,10-trans-geranylgeranyl diphosphate + homogentisate + H+ = diphosphoric acid + 2-methyl-6-geranylgeranyl-1,4-benzoquinol + carbon dioxide.","definition_xrefs":["EC:2.5.1.116","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"homogentisate geranylgeranyl transferase activity","secondary_identifiers":["MetaCyc:RXN-14929","RHEA:38003"],"termid":"GO:0102551"}


id: PBO:0086980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; VTC2 has a paralog, VTC3, that arose from the whole genome duplication","termid":"PBO:0086980"}


id: GO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous scaffold found between homologous chromosomes during meiosis. It consists of 2 lateral elements and a central element, all running parallel to each other. Transverse filaments connect the lateral elements to the central element.","definition_xrefs":["DOI:10.5772/29752","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptonemal structure","termid":"GO:0099086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"synaptonemal complex","secondary_identifiers":["GO:0005716","Wikipedia:Synaptonemal_complex"],"termid":"GO:0000795"}


id: PBO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II beta subunit","termid":"PBO:0015265"}


id: GO:0035806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that affects blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.","definition_xrefs":["GOC:bf","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of blood coagulation in another organism","synonyms":[{"name":"modulation by organism of blood clotting in other organism","type":"exact"},{"name":"modulation by organism of blood coagulation in other organism","type":"exact"},{"name":"modulation of blood coagulation in another organism","type":"exact"},{"name":"modulation of blood coagulation in other organism","type":"exact"},{"name":"perturbation of blood clotting in another organism","type":"exact"},{"name":"regulation by organism of blood clotting in other organism","type":"exact"},{"name":"regulation of blood clotting in other organism","type":"exact"},{"name":"regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0035806"}


id: GO:0033324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate N-monomethylethanolamine.","definition_xrefs":["MetaCyc:PWY-3542","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via N-monomethylethanolamine","secondary_identifiers":["MetaCyc:PWY-4762"],"synonyms":[{"name":"choline anabolism via N-monomethylethanolamine","type":"exact"},{"name":"choline biosynthesis via N-monomethylethanolamine","type":"exact"},{"name":"choline formation via N-monomethylethanolamine","type":"exact"},{"name":"choline synthesis via N-monomethylethanolamine","type":"exact"}],"termid":"GO:0033324"}


id: PBO:0034336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_Is_bouton_to","termid":"PBO:0034336"}


id: GO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase biosynthetic process","termid":"GO:0051769"},{"relation_name":"positively_regulates","term_name":"nitric-oxide synthase biosynthetic process","termid":"GO:0051767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051773"],"synonyms":[{"name":"activation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"activation of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of NO synthase biosynthesis","type":"exact"},{"name":"positive regulation of NO synthase biosynthetic process","type":"exact"},{"name":"positive regulation of NOS biosynthesis","type":"exact"},{"name":"positive regulation of NOS biosynthetic process","type":"exact"},{"name":"positive regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"positive regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"stimulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"stimulation of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"up regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"up regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"up-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"up-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"upregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"upregulation of nitric-oxide synthase biosynthetic process","type":"exact"}],"termid":"GO:0051770"}


id: FYPO:0006041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic metaphase chromosome recapture is decreased.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000337","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased rate of chromosome recapture during mitosis","type":"exact"},{"name":"decreased rate of chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased rate of kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased rate of metaphase chromosome recapture during mitotic cell cycle","type":"related"},{"name":"decreased rate of mitotic kinetochore retrieval","type":"exact"},{"name":"decreased rate of mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased rate of mitotic sister kinetochore recapture","type":"exact"},{"name":"increased time to mitotic metaphase chromosome recapture","type":"related"},{"name":"reduced rate of mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0006041"}


id: GO:0180028
data:
  {"annotated_genes":["SJAG_01242","SJAG_03783","SJAG_05303","SJAG_05207","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83749,93523,96392,99175,109929],"is_not":false,"summary":null,"term":"GO:0180028"}]},"cv_name":"cellular_component","definition":"A region of the nuclear envelope to which a spindle pole body (SPB) attaches; protein complexes embedded in the nuclear envelope mediate direct or indirect linkages between the microtubule cytoskeleton and the nuclear envelope.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_03783":null,"SJAG_04489":null,"SJAG_05207":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180028","terms_by_termid":{"GO:0180028":null}}


id: PBO:0004537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase (predicted)","termid":"PBO:0004537"}


id: GO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a lymphoid progenitor cell. Lymphoid progenitor cells include progenitor cells for any of the lymphoid lineages.","definition_xrefs":["PMID:16551251","GOC:add","PMID:16551264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}


id: PBO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide mononucleotide (NMN) adenylyltransferase (predicted)","termid":"PBO:0000234"}


id: MOD:01453
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-glutamate 5-methyl ester.","definition_xrefs":["RESID:AA0072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated glutamic acid","termid":"MOD:00713"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 5-methyl ester","synonyms":[{"name":"(2S)-2-amino-5-methoxy-5-oxopentanoic acid","type":"exact"},{"name":"(5)-methyl L-hydrogen glutamate","type":"exact"},{"name":"2-aminopentanedioic acid 5-methyl ester","type":"exact"},{"name":"5-methyl L-2-aminoglutarate","type":"exact"},{"name":"5-methyl L-glutamate","type":"exact"},{"name":"5-methyl esterified L-glutamic acid","type":"exact"},{"name":"L-glutamic acid 5-methyl ester","type":"exact"},{"name":"O-methyl Glutamyl","type":"exact"},{"name":"O5MeGlu","type":"exact"},{"name":"glutamic acid 5-methyl ester","type":"exact"},{"name":"glutamic acid gamma-methyl ester","type":"exact"}],"termid":"MOD:01453"}


id: PBO:0055743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox transcription factor 1 beta","termid":"PBO:0055743"}


id: GO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular wound healing","termid":"GO:0061043"}


id: PBO:0042014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 71","termid":"PBO:0042014"}


id: PBO:0086925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate carboxylase isoform; cytoplasmic enzyme that converts pyruvate to oxaloacetate; differentially regulated than isoform Pyc1p; mutations in the human homolog are associated with lactic acidosis; PYC2 has a paralog, PYC1, that arose from the whole genome duplication","termid":"PBO:0086925"}


id: PATO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the base of an organism relative to another entity.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/basal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal to","termid":"PATO:0002349"}


id: PBO:0004378
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.3.1","termid":"PBO:0004378"}


id: PBO:0082564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone protein; required for the assembly of box H/ACA snoRNPs and thus for pre-rRNA processing; functions as an RNA mimic; forms a complex with Naf1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; homology with known Hsp90p cochaperones; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082564"}


id: PBO:0053683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 870","termid":"PBO:0053683"}


id: PBO:0065869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB26, member RAS oncogene family","termid":"PBO:0065869"}


id: GO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 4.5S ribosomal RNA (rRNA) molecule into a mature 4.5S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"maturation of 4.5S rRNA","termid":"GO:0000476"}


id: PBO:0044858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 1","termid":"PBO:0044858"}


id: PBO:0088362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(37)-N(1))-methyltransferase activity Trm5","termid":"PBO:0088362"}


id: PBO:0068137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 444","termid":"PBO:0068137"}


id: PBO:0074228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 2","termid":"PBO:0074228"}


id: GO:0102941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5-dihydroxyanisole + S-adenosyl-L-methionine = H+ + 3,5-dimethoxyphenol + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3,5-dihydroxyanisole O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9021"],"termid":"GO:0102941"}


id: GO:0098673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which a virus inhibits DNA replication in its host cell. Some bacteriophages are known to do this, possibly as a way of increasing the pool of nucleotides available for virus replication.","definition_xrefs":["PMID:17010157","PMID:21205014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibition of host DNA replication by virus","termid":"GO:0098673"}


id: PR:Q10369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22E12.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.19","synonyms":[{"name":"Spom972h-snt1","type":"exact"}],"termid":"PR:Q10369"}


id: GO:0047008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pregnan-21-ol = H+ + NADPH + pregnan-21-al.","definition_xrefs":["RHEA:23712","EC:1.1.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pregnan-21-ol dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:1.1.1.151-RXN","KEGG_REACTION:R03044"],"synonyms":[{"name":"21-hydroxy steroid (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"broad"},{"name":"21-hydroxy steroid dehydrogenase (nicotinamide adenine dinucleotide phosphate) activity","type":"broad"},{"name":"21-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"21-hydroxysteroid dehydrogenase (NADP+) activity","type":"broad"},{"name":"21-hydroxysteroid:NADP+ 21-oxidoreductase activity","type":"broad"},{"name":"NADP-21-hydroxysteroid dehydrogenase activity","type":"broad"}],"termid":"GO:0047008"}


id: PR:O94596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.06c","synonyms":[{"name":"Spom972h-SPCC622.06c","type":"exact"}],"termid":"PR:O94596"}


id: PBO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Spc25","termid":"PBO:0018178"}


id: FYPO:0002702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which one or more chromosomes forms a circle by fusion of its ends.","definition_xrefs":["PMID:11349150","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000654","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"circularized chromosome","synonyms":[{"name":"NHEJ-dependent telomere fusions","type":"narrow"},{"name":"circular chromosomes","type":"exact"},{"name":"circularised chromosome","type":"exact"},{"name":"circularized chromosome during mitotic cell cycle","type":"related"},{"name":"circularized chromosome during vegetative growth","type":"exact"},{"name":"fused telomeres","type":"related"},{"name":"telomere end fusion","type":"related"},{"name":"telomere end-to-end fusion","type":"exact"},{"name":"telomeres fused","type":"related"}],"termid":"FYPO:0002702"}


id: PBO:0051279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-12","termid":"PBO:0051279"}


id: GO:0019149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chloro-D-alanine + H2O = pyruvate + chloride + NH3.","definition_xrefs":["EC:4.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-chloro-D-alanine dehydrochlorinase activity","secondary_identifiers":["MetaCyc:3-CHLORO-D-ALANINE-DEHYDROCHLORINASE-RXN","RHEA:18873"],"synonyms":[{"name":"3-chloro-D-alanine chloride-lyase (deaminating)","type":"related"},{"name":"3-chloro-D-alanine chloride-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"beta-chloro-D-alanine dehydrochlorinase activity","type":"related"}],"termid":"GO:0019149"}


id: PBO:0078774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-6","termid":"PBO:0078774"}


id: PBO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SKN7","termid":"PBO:0015697"}


id: PBO:0085397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane (PM) ubiquitin ligase-substrate adaptor; involved in cell wall chitin deposition; ubiquitinates and down-regulates chitin synthase Chs3p abundance at PM via calcineurin/Crz1 signaling pathway which regulates RCR1 expression; delivered to PM by exomer complex using novel PM sorting motif; RCR1 has a paralog, RCR2, that arose from the whole genome duplication","termid":"PBO:0085397"}


id: PBO:0039441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKH inorganic pyrophosphate transport regulator","termid":"PBO:0039441"}


id: PBO:0078048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 38","termid":"PBO:0078048"}


id: GO:0034000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endolytic cleavage of beta-1,4-galactosaminic bonds between N-acetylgalactosamine and either D-glucuronic acid or L-iduronic acid to produce a mixture of Delta4-unsaturated oligosaccharides of different sizes that are ultimately degraded to Delta4-unsaturated tetra- and disaccharides.","definition_xrefs":["EC:4.2.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"chondroitin-sulfate-ABC endolyase activity","secondary_identifiers":["MetaCyc:4.2.2.19-RXN","MetaCyc:RXN-11572","MetaCyc:4.2.2.5-RXN"],"synonyms":[{"name":"ChS ABC lyase I activity","type":"related"},{"name":"ChS ABC lyase activity","type":"broad"},{"name":"chondroitin ABC eliminase activity","type":"broad"},{"name":"chondroitin sulfate ABC endoeliminase activity","type":"related"},{"name":"chondroitin sulfate ABC endolyase activity","type":"related"},{"name":"chondroitin sulfate ABC lyase activity","type":"broad"},{"name":"chondroitinase ABC activity","type":"broad"},{"name":"chondroitinase activity","type":"broad"}],"termid":"GO:0034000"}


id: PBO:0049456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 1","termid":"PBO:0049456"}


id: FYPO:0001663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular cAMP level","termid":"FYPO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular cAMP level during glucose starvation","synonyms":[{"name":"increased cAMP accumulation during cellular response to glucose starvation","type":"related"},{"name":"increased cellular cAMP level during glucose depletion","type":"exact"},{"name":"increased cellular cAMP level during glucose deprivation","type":"exact"},{"name":"increased cellular cAMP level during glucose limitation","type":"related"},{"name":"increased cellular cAMP level in response to glucose starvation","type":"exact"},{"name":"increased cellular cyclic AMP level and during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0001663"}


id: PBO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumerate reductase (predicted)","termid":"PBO:0002117"}


id: PBO:0081763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF692 divergent transcript","termid":"PBO:0081763"}


id: PBO:0049064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79, pseudogene","termid":"PBO:0049064"}


id: PBO:0071870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 8","termid":"PBO:0071870"}


id: MOD:01454
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-terminal L-proline residue and a strand of DNA at the C-1 of a ribose, freeing the nucleotide base and forming N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium.","definition_xrefs":["PubMed:11847126","PubMed:10833024","PubMed:9030608","RESID:AA0494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium","synonyms":[{"name":"(1Z,2S)-2-carboxy-1-[(3R,4R)-3,4-dihydroxy-5-(phosphonooxy)pentylidene]pyrrolidinium","type":"exact"},{"name":"DNA glycosylase proline Schiff base intermediate","type":"related"},{"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium","type":"exact"}],"termid":"MOD:01454"}


id: PBO:0011423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0011423"}


id: PBO:0064480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLH antisense RNA 1","termid":"PBO:0064480"}


id: PBO:0033829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate isomerase Mpi1 (predicted)","termid":"PBO:0033829"}


id: PBO:0054448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1845","termid":"PBO:0054448"}


id: PBO:0071788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p21","termid":"PBO:0071788"}


id: GO:2000645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"regulation of receptor catabolic process","termid":"GO:2000644"},{"relation_name":"negatively_regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of receptor catabolic process","synonyms":[{"name":"negative regulation of receptor breakdown","type":"exact"},{"name":"negative regulation of receptor catabolism","type":"exact"},{"name":"negative regulation of receptor degradation","type":"exact"}],"termid":"GO:2000645"}


id: GO:0018120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-arginine to form omega-N-(ADP-ribosyl)-L-arginine.","definition_xrefs":["RESID:AA0168"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine ADP-ribosylation (obsolete GO:0018120)","termid":"GO:0018120"}


id: GO:0006089
data:
  {"annotated_genes":["SJAG_04674","SJAG_02960","SJAG_01596","SJAG_04404","SJAG_04726","SJAG_02988","SJAG_03804","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60251,59176,60880,88089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[78813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[74074,95832,98258,72536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[60878,100456,59174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactate, the anion of lactic acid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_03804":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"2-hydroxypropanoate metabolic process","type":"exact"},{"name":"2-hydroxypropanoate metabolism","type":"exact"},{"name":"alpha-hydroxypropionate metabolic process","type":"exact"},{"name":"alpha-hydroxypropionate metabolism","type":"exact"},{"name":"lactate metabolism","type":"exact"}],"termid":"GO:0006089","terms_by_termid":{"GO:0019243":null,"GO:0019249":null,"GO:0061727":null,"GO:1903457":null}}


id: PBO:0081705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF625-ZNF20 readthrough (NMD candidate)","termid":"PBO:0081705"}


id: PBO:0040763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain enriched guanylate kinase associated","termid":"PBO:0040763"}


id: PBO:0079084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 1-1","termid":"PBO:0079084"}


id: PR:Q9Y7M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L15, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03015","PANTHER:PTHR12934:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.06","secondary_identifiers":["UniProtKB:Q9Y7M5"],"synonyms":[{"name":"Spom972h-MRPL15","type":"exact"}],"termid":"PR:Q9Y7M5"}


id: PBO:0064454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pogo transposable element derived with KRAB domain","termid":"PBO:0064454"}


id: GO:0005702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the polytene chromosome where the diameter is considerably decreased, probably resulting from local differences in chromosome organization.","definition_xrefs":["ISBN:0120649012","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome weak point","synonyms":[{"name":"constriction","type":"broad"}],"termid":"GO:0005702"}


id: GO:0036199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholest-4-en-3-one + NADH + H+ + O2 = 26-hydroxycholest-4-en-3-one + NAD+ + H2O. This reaction involves the hydroxylation of the C26 carbon, followed by oxidation of the alcohol to the carboxylic acid via the aldehyde intermediate.","definition_xrefs":["EC:1.14.15.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholest-4-en-3-one 26-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R09859","RHEA:51564"],"termid":"GO:0036199"}


id: PBO:0045062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG2 antisense RNA 2","termid":"PBO:0045062"}


id: PBO:0068709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 90, pseudogene","termid":"PBO:0068709"}


id: PBO:0075489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 2, pseudogene","termid":"PBO:0075489"}


id: PBO:0026850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_rRNA_gene","termid":"PBO:0026850"}


id: SO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with iron ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_iron_ion_contact_site","secondary_identifiers":["BS:00137"],"synonyms":[{"name":"Fe_contact_site","type":"exact"},{"name":"polypeptide iron ion contact site","type":"exact"}],"termid":"SO:0001097"}


id: GO:0140250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the synapse.","definition_xrefs":["PMID:23083742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}


id: PBO:0083737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity","termid":"PBO:0083737"}


id: PR:C6Y4C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet117 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pet117, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.25","synonyms":[{"name":"Spom972h-pet117","type":"exact"}],"termid":"PR:C6Y4C1"}


id: FYPO:0000929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell cortex during vegetative growth","synonyms":[{"name":"decreased protein localisation to cell cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to cell cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0000929"}


id: PBO:0032772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin synthase Rib5","termid":"PBO:0032772"}


id: GO:0045679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R8 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R8 cell differentiation","termid":"GO:0045679"}


id: CHEBI:28939
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-L-cysteine","termid":"CHEBI:28939"}


id: _global:recombined_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombined_from","termid":"_global:recombined_from"}


id: GO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoterpenoid metabolic process","synonyms":[{"name":"monoterpenoid metabolism","type":"exact"}],"termid":"GO:0016098"}


id: FYPO:0002447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the N-glycosylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein N-linked glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan.","definition_xrefs":["GO:0006487","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein N-linked glycosylation during vegetative growth","synonyms":[{"name":"abnormal protein N-glycosylation during vegetative growth","type":"exact"},{"name":"abnormal protein N-linked glycosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002447"}


id: GO:0034808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-4,5-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzo(a)pyrene 4,5-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034808"}


id: PBO:0056261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALT1 antisense RNA 1","termid":"PBO:0056261"}


id: GO:0010609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression after the production of a mRNA transcript by its transport into, or maintainance in, a specific location within the cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization","termid":"GO:0008298"},{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051179"],"is_obsolete":false,"name":"mRNA localization resulting in post-transcriptional regulation of gene expression","synonyms":[{"name":"mRNA localisation resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"mRNA localization resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localisation","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localization","type":"exact"}],"termid":"GO:0010609"}


id: PBO:0086758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proposed to be involved in iron or copper homeostasis; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086758"}


id: PBO:0069622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 899, pseudogene","termid":"PBO:0069622"}


id: MOD:00720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxygenates an L-methionine residue to L-methionine sulfoxide R-diastereomer.","definition_xrefs":["PubMed:21406390","RESID:AA0581","PubMed:22116028","ChEBI:45764","PubMed:23911929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine (R)-sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"MOD_RES Methionine (R)-sulfoxide","type":"exact"},{"name":"R-MetO","type":"exact"}],"termid":"MOD:00720"}


id: GO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,4'-disulfate.","definition_xrefs":["EC:2.8.2.27","RHEA:17205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"quercetin-3-sulfate 4'-sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.27-RXN","KEGG_REACTION:R02633"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"flavonol 4'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 4'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047366"}


id: GO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6,7,8-tetrahydromethanopterin + N-formylmethanofuran + H+ = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + methanofuran.","definition_xrefs":["EC:2.3.1.101","RHEA:18061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"formylmethanofuran-tetrahydromethanopterin N-formyltransferase activity","secondary_identifiers":["UM-BBD_reactionID:r0346","MetaCyc:2.3.1.101-RXN","KEGG_REACTION:R03390","GO:0018714"],"synonyms":[{"name":"FTR","type":"related"},{"name":"N-formylmethanofuran(CHO-MFR):tetrahydromethanopterin(H4MPT) formyltransferase activity","type":"related"},{"name":"formylmethanofuran-tetrahydromethanopterin formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin 5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin N5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:tetrahydromethanopterin formyltransferase activity","type":"related"}],"termid":"GO:0030270"}


id: GO:1903433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of constitutive secretory pathway.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:22899725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"constitutive secretory pathway","termid":"GO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of constitutive secretory pathway","termid":"GO:1903433"}


id: GO:0090334
data:
  {"annotated_genes":["SJAG_04666","SJAG_04462","SJAG_00610","SJAG_03705","SJAG_04668","SJAG_04771","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86478,88051,98308,100753,113026],"is_not":false,"summary":null,"term":"GO:0090334"},{"annotations":[83320,88065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0032953"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"cell wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0034411"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"regulation of cell wall 1,3-beta-glucan biosynthetic process","type":"broad"}],"termid":"GO:0090334","terms_by_termid":{"GO:0090334":null,"GO:0140748":null}}


id: PBO:0067281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 362, pseudogene","termid":"PBO:0067281"}


id: GO:0072034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal vesicle induction","synonyms":[{"name":"nephron induction","type":"exact"},{"name":"positive regulation of nephron formation","type":"exact"}],"termid":"GO:0072034"}


id: PBO:0027320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027320"}


id: PBO:0056255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein like","termid":"PBO:0056255"}


id: GO:0110093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile nucleus furthest from the direction of movement.","definition_xrefs":["PMID:24335254","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleus lagging edge","termid":"GO:0110093"}


id: PBO:0056685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 9","termid":"PBO:0056685"}


id: PBO:0059865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 2","termid":"PBO:0059865"}


id: PBO:0044708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6 pseudogene 2","termid":"PBO:0044708"}


id: PBO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_deep_homology_relationship_with","termid":"PBO:0034153"}


id: PBO:0083734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential chromatin-associated protein; involved in initiation of DNA replication; required for association of MCM2-7 complex with replication origins; required to stabilize catalytic subunit of DNA polymerase-alpha; coordinates function of replication fork helicase; self-associates through its N-terminal domain","termid":"PBO:0083734"}


id: PBO:0078543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 35","termid":"PBO:0078543"}


id: PBO:0063368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 7","termid":"PBO:0063368"}


id: PBO:0056427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 2","termid":"PBO:0056427"}


id: GO:2001270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis","synonyms":[{"name":"regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001270"}


id: FYPO:0004903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell separation after cytokinesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell separation after cytokinesis RNAs are transcribed from genes whose products are involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25530312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of cell separation after cytokinesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell separation after cytokinesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell separation after cytokinesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cytokinetic cell separation gene mRNA during vegetative growth","type":"related"},{"name":"reduced level of cell separation after cytokinesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004903"}


id: GO:0042704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sloughing of the endometrium and blood vessels during menstruation that results from a drop in progesterone levels.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine wall breakdown","termid":"GO:0042704"}


id: GO:0045130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + keratan = adenosine 3',5'-bisphosphate + keratan 6'-sulfate.","definition_xrefs":["EC:2.8.2.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"keratan sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2046175","MetaCyc:KERATAN-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl keratan sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:keratan 6'-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:keratan sulfotransferase activity","type":"related"},{"name":"keratan sulfate Gal-6-sulfotransferase activity","type":"exact"},{"name":"keratan sulfate sulfotransferase activity","type":"related"},{"name":"keratan sulphotransferase activity","type":"exact"}],"termid":"GO:0045130"}


id: PBO:0034567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_during_meiotic_cell_cycle","termid":"PBO:0034567"}


id: PBO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEA domain protein","termid":"PBO:0000738"}


id: GO:1904841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TORC2 complex.","definition_xrefs":["PMID:20660630","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TORC2 complex binding","synonyms":[{"name":"TOR complex 2 binding","type":"exact"},{"name":"TORC 2 complex binding","type":"exact"},{"name":"TORC2 binding","type":"exact"},{"name":"mTORC2 binding","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex binding","type":"exact"}],"termid":"GO:1904841"}


id: GO:0015050
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses methane monooxygenase activity; dimeric and trimeric complexes have been characterized.","definition_xrefs":["BRENDA:1.14.13.25","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methane monooxygenase complex","termid":"GO:0015050"}


id: PBO:0088776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap111","termid":"PBO:0088776"}


id: PBO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho3","termid":"PBO:0000740"}


id: GO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter metabolic process (obsolete GO:0042133)","synonyms":[{"name":"neurotransmitter metabolism","type":"exact"}],"termid":"GO:0042133"}


id: GO:1904678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-aminoacyl-tRNA.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"alpha-aminoacyl-tRNA binding","synonyms":[{"name":"aminoacyl-tRNA binding","type":"related"}],"termid":"GO:1904678"}


id: GO:0097193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway starts with reception of an intracellular signal (e.g. DNA damage, endoplasmic reticulum stress, oxidative stress etc.), and ends when the execution phase of apoptosis is triggered. The intrinsic apoptotic signaling pathway is crucially regulated by permeabilization of the mitochondrial outer membrane (MOMP).","definition_xrefs":["PMID:17340152","PMID:18852119","GOC:mtg_apoptosis","PMID:11919192","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway","secondary_identifiers":["GO:0008629"],"synonyms":[{"name":"induction of apoptosis by intracellular signals","type":"related"},{"name":"intrinsic apoptosis","type":"narrow"},{"name":"intrinsic apoptotic pathway","type":"exact"},{"name":"intrinsic apoptotic signalling pathway","type":"exact"},{"name":"mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:0097193"}


id: PBO:0053984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1300","termid":"PBO:0053984"}


id: PR:O14269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iss10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.14c","synonyms":[{"name":"Spom972h-iss10","type":"exact"}],"termid":"PR:O14269"}


id: GO:0097216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to guanosine tetraphosphate (5'-ppGpp-3'), a guanosine bisphosphate having diphosphate groups at both the 3' and 5'-positions.","definition_xrefs":["GOC:imk","PMID:15109491","PMID:18359660","PMID:16968770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanosine tetraphosphate binding","synonyms":[{"name":"5'-ppGpp-3' binding","type":"exact"}],"termid":"GO:0097216"}


id: GO:0046676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of insulin secretion","termid":"GO:0050796"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of insulin secretion","synonyms":[{"name":"down regulation of insulin secretion","type":"exact"},{"name":"down-regulation of insulin secretion","type":"exact"},{"name":"downregulation of insulin secretion","type":"exact"},{"name":"inhibition of insulin secretion","type":"narrow"}],"termid":"GO:0046676"}


id: PBO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 2","termid":"PBO:0060986"}


id: PBO:0003286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone promoter control protein Hip4","termid":"PBO:0003286"}


id: GO:0072063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the short descending thin limb over time, from its formation to the mature structure. The short descending thin limb is the descending thin limb of a short nephron that has a squamous epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"is_a","term_name":"descending thin limb development","termid":"GO:0072022"},{"relation_name":"part_of","term_name":"short nephron development","termid":"GO:0072030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short descending thin limb development","termid":"GO:0072063"}


id: FYPO:0000861
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114397,114396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[114389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"normal histone methylation during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000861","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: GO:0046123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any purine deoxyribonucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside biosynthetic process","termid":"GO:0042451"},{"relation_name":"is_a","term_name":"deoxyribonucleoside biosynthetic process","termid":"GO:0046120"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside anabolism","type":"exact"},{"name":"purine deoxyribonucleoside biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside formation","type":"exact"},{"name":"purine deoxyribonucleoside synthesis","type":"exact"}],"termid":"GO:0046123"}


id: PBO:0070984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 8","termid":"PBO:0070984"}


id: PBO:0057857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3168","termid":"PBO:0057857"}


id: PBO:0054226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1608","termid":"PBO:0054226"}


id: GO:0043402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a glucocorticoid hormone.","definition_xrefs":["PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone mediated signaling pathway","termid":"GO:0043401"},{"relation_name":"part_of","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glucocorticoid mediated signaling pathway","synonyms":[{"name":"glucocorticoid mediated signalling","type":"exact"}],"termid":"GO:0043402"}


id: PBO:0041211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 2","termid":"PBO:0041211"}


id: GO:0097344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that comprises Rix1p, Ipi1p and Ipi3p, and is required for processing of ITS2 sequences from 35S pre-rRNA. The Rix1 complex has been identified in budding yeast and fission yeast, and members of this complex are conserved in higher eukaryotes.","definition_xrefs":["PMID:14759368","GOC:vw","PMID:15260980","PMID:21385875"],"gene_count":0,"genotype_count":0,"name":"obsolete Rix1 complex (obsolete GO:0097344)","synonyms":[{"name":"IPI complex","type":"exact"}],"termid":"GO:0097344"}


id: GO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in pronephric nephron development","synonyms":[{"name":"pronephros proximal/distal pattern formation","type":"exact"}],"termid":"GO:0072196"}


id: GO:0006508
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id: FYPO:0000440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to antimycin A. Cells stop growing (and may die) at a concentration of antimycin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to antimycin A","synonyms":[{"name":"hypersensitive to antimycin A","type":"exact"},{"name":"sensitive to antimycin A during mitotic cell cycle","type":"related"},{"name":"sensitive to antimycin A during vegetative growth","type":"exact"}],"termid":"FYPO:0000440"}


id: PBO:0082607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds and regulates Hsp90 family chaperones; plays a role in determining prion variants; important for pp60v-src activity in yeast; homologous to the mammalian p23 proteins, and like p23 can regulate telomerase activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0082607"}


id: GO:1990946
data:
  {"annotated_genes":["SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94242],"is_not":false,"summary":null,"term":"GO:1990946"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from meiosis I to meiosis II.","definition_xrefs":["PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01515":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis I/meiosis II transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990946","terms_by_termid":{"GO:1990946":null}}


id: FYPO:0000974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to zinc ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to zinc ion","synonyms":[{"name":"normal cellular response to zinc","type":"exact"},{"name":"normal cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to zinc ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000974"}


id: PBO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR2 antisense RNA 1","termid":"PBO:0047696"}


id: PBO:0042745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPS-CORT readthrough","termid":"PBO:0042745"}


id: FYPO:0001416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfide:quinone oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal sulfide:quinone oxidoreductase activity","termid":"FYPO:0001415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased sulfide:quinone oxidoreductase activity","synonyms":[{"name":"decreased sulfide-quinone reductase activity","type":"exact"},{"name":"decreased sulfide:quinone reductase activity","type":"exact"},{"name":"decreased sulphide:quinone oxidoreductase activity","type":"exact"},{"name":"reduced sulfide:quinone oxidoreductase activity","type":"exact"}],"termid":"FYPO:0001416"}


id: PBO:0031777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_endocytosis_during_vegetative_growth","termid":"PBO:0031777"}


id: PBO:0079025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 8-1","termid":"PBO:0079025"}


id: PBO:0076370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 7, pseudogene","termid":"PBO:0076370"}


id: PBO:0058455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5094","termid":"PBO:0058455"}


id: GO:0021725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior raphe nucleus over time, from its formation to the mature structure.","definition_xrefs":["ZFA:0000440","GOC:cvs","GOC:cjm","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","GOC:curators","PMID:19003874","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior raphe nucleus development","synonyms":[{"name":"anterior raphe nucleus development","type":"broad"},{"name":"superior central nucleus development","type":"broad"}],"termid":"GO:0021725"}


id: PBO:0029518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_shape","termid":"PBO:0029518"}


id: PBO:0091261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, not reproduced","termid":"PBO:0091261"}


id: GO:0031429
data:
  {"annotated_genes":["SJAG_00566","SJAG_01234","SJAG_04754","SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74068,78838,85741,96665],"is_not":false,"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A box H/ACA RNP complex that is located in the nucleolus.","definition_xrefs":["PMID:17284456","ISBN:0879695897","PMID:20227365","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005730","GO:0005575"],"is_obsolete":false,"name":"box H/ACA snoRNP complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"box H/ACA small nucleolar ribonucleoprotein complex","type":"exact"},{"name":"box H/ACA snoRNP pseudouridylase complex","type":"exact"}],"termid":"GO:0031429","terms_by_termid":{"GO:0031429":null}}


id: PBO:0044916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 2 like 7, pseudogene","termid":"PBO:0044916"}


id: PR:O94283
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-derived vesicles protein 41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.04c","synonyms":[{"name":"Spom972h-erv41","type":"exact"}],"termid":"PR:O94283"}


id: PBO:0066596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q","termid":"PBO:0066596"}


id: GO:0045803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytoskeleton (obsolete GO:0045803)","synonyms":[{"name":"positive regulation of cytoskeleton","type":"exact"}],"termid":"GO:0045803"}


id: PBO:0054694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2103","termid":"PBO:0054694"}


id: SO:0000787
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000787 clone_attribute (obsolete SO:0000787)","termid":"SO:0000787"}


id: PBO:0087951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF5; functions as both a GTPase-activating protein (GAP) that stimulates the hydrolysis of GTP bound to eIF-2, as part of the 43S preinitiation complex, and as a GDP dissociation inhibitor (GDI) to prevent recycling of eIF2; human ortholog eIF5 complements the yeast null mutant","termid":"PBO:0087951"}


id: PBO:0042354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD96 molecule","termid":"PBO:0042354"}


id: PBO:0110188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial poly(A) RNA polymerase Atp25","termid":"PBO:0110188"}


id: PBO:0087427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting, associated with cytoplasmic ribosomes; enhances DNA binding of the Gal4p activator; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication","termid":"PBO:0087427"}


id: PBO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit","termid":"PBO:0044688"}


id: PBO:0041668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 1","termid":"PBO:0041668"}


id: PBO:0074378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 4","termid":"PBO:0074378"}


id: GO:0120326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Penetration by a symbiont into a host organism via an appressorium. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ach","GOC:krc","PMID:14731267","PMID:22589729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium-mediated entry into host","synonyms":[{"name":"appressorium-mediated host invasion","type":"exact"},{"name":"appressorium-mediated host penetration","type":"exact"},{"name":"appressorium-mediated invasion into host","type":"exact"},{"name":"appressorium-mediated penetration into host","type":"exact"}],"termid":"GO:0120326"}


id: PBO:0074713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74D","termid":"PBO:0074713"}


id: PBO:0003738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP dehydrogenase Gua1 (predicted)","termid":"PBO:0003738"}


id: PBO:0034052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_vector","termid":"PBO:0034052"}


id: PBO:0059583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioadenosine phosphorylase","termid":"PBO:0059583"}


id: PBO:0083987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamyl-tRNA synthetase (GluRS); forms a complex with methionyl-tRNA synthetase (Mes1p) and Arc1p; complex formation increases the catalytic efficiency of both tRNA synthetases and ensures their correct localization to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0083987"}


id: PATO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be eaten.","definition_xrefs":["PATOC:VO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edibility","synonyms":[{"name":"edibleness","type":"exact"}],"termid":"PATO:0002138"}


id: MOD:00701
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a nucleotide or a polynucleotide through formation of either a phosphodiester bond, a phosphoramide ester bond, or a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide or nucleic acid modified residue","synonyms":[{"name":"NucRes","type":"exact"}],"termid":"MOD:00701"}


id: PBO:0058005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3928","termid":"PBO:0058005"}


id: FYPO:0007683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which components of the actin fusion focus are more widely distributed along the shmoo tip than normal.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"wide actin fusion focus","synonyms":[{"name":"increased actin fusion focus diameter","type":"exact"},{"name":"increased actin fusion focus width","type":"exact"},{"name":"wider actin fusion focus","type":"exact"}],"termid":"FYPO:0007683"}


id: GO:1990802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation that is required for DNA double-strand break processing.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:rb","PMID:21841787"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in DNA double-strand break processing (obsolete GO:1990802)","synonyms":[{"name":"protein amino acid phosphorylation involved in DNA double-strand break processing","type":"exact"}],"termid":"GO:1990802"}


id: GO:0140650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of a pyramidal neuron along radial glial cells.","definition_xrefs":["PMID:3760547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia-guided pyramidal neuron migration","synonyms":[{"name":"radial glia-dependent neuronal migration","type":"exact"}],"termid":"GO:0140650"}


id: PBO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Avt3","termid":"PBO:0001255"}


id: PBO:0068568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 19, pseudogene","termid":"PBO:0068568"}


id: PBO:0052481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHDC7B divergent transcript","termid":"PBO:0052481"}


id: PR:O43003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mmf1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.04c","synonyms":[{"name":"Spom972h-mmf1","type":"exact"},{"name":"isoleucine biosynthesis and maintenance of intact mitochondria 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"maintenance of mitochondrial function 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43003"}


id: GO:0035279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference pathway in which microRNAs (miRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA base pairing with near-perfect complementarity to the target mRNA will typically direct targeted endonucleolytic cleavage of the mRNA. Many plant miRNAs downregulate gene expression through this mechanism.","definition_xrefs":["PMID:15196554","PMID:14744438","GOC:mtg_lung","PMID:23209154","PMID:21118121","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"miRNA-mediated gene silencing by mRNA destabilization","synonyms":[{"name":"deadenylation involved in gene silencing by miRNA","type":"related"},{"name":"gene silencing by mRNA cleavage","type":"broad"},{"name":"gene silencing by miRNA, mRNA cleavage","type":"exact"},{"name":"mRNA cleavage involved in gene silencing by miRNA","type":"exact"},{"name":"mRNA cleavage involved in gene silencing by microRNA","type":"exact"},{"name":"mRNA deadenylation-mediated gene silencing by miRNA","type":"related"},{"name":"mRNA destabilization-mediated gene silencing by miRNA","type":"exact"},{"name":"miRNA-mediated gene silencing by mRNA deadenylation","type":"related"},{"name":"miRNA-mediated gene silencing, mRNA cleavage","type":"exact"}],"termid":"GO:0035279"}


id: PBO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1772 family protein","termid":"PBO:0003114"}


id: GO:0014879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an electrical stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to electrical stimulus involved in regulation of muscle adaptation","termid":"GO:0014878"},{"relation_name":"is_a","term_name":"detection of electrical stimulus","termid":"GO:0050981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in regulation of muscle adaptation","termid":"GO:0014879"}


id: FYPO:0002178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which cells in the population are viable, and some cells are longer than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete viable mixed population including long cells (obsolete FYPO:0002178)","synonyms":[{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0002178"}


id: PBO:0073308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 4","termid":"PBO:0073308"}


id: PR:O42839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13260:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.01c","secondary_identifiers":["UniProtKB:O42839"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19G12.01c","type":"related"},{"name":"Spom972h-ANAPC4","type":"exact"},{"name":"apc4","type":"related"},{"name":"cell untimely torn protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid1","type":"related"}],"termid":"PR:O42839"}


id: PR:C6Y4B0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.14 gene.","definition_xrefs":["UniProtKB:C6Y4B0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.14","synonyms":[{"name":"Spom972h-SPAC27E2.14","type":"exact"}],"termid":"PR:C6Y4B0"}


id: PR:O74848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug146 gene.","definition_xrefs":["UniProtKB:O74848","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 146 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.12c","synonyms":[{"name":"Spom972h-mug146","type":"exact"}],"termid":"PR:O74848"}


id: RO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during_or_before","termid":"RO:0002497"}


id: PATO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being moved or displaced to one side so as to make lateral.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateralized","termid":"PATO:0000626"}


id: PBO:0089194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein","termid":"PBO:0089194"}


id: PBO:0083981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamate decarboxylase; converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress","termid":"PBO:0083981"}


id: PBO:0065893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB39B, member RAS oncogene family","termid":"PBO:0065893"}


id: PBO:0079161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 19","termid":"PBO:0079161"}


id: FYPO:0003403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glyoxalase III activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}


id: PBO:0029875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3_acetylation","termid":"PBO:0029875"}


id: GO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of nicotinamide mononucleotide into, out of or within a cell, or between cells. Nicotinamide mononucleotide is a ribonucleotide in which the nitrogenous base, nicotinamide, is in beta-n-glycosidic linkage with the c-1 position of d-ribose. It is a constituent of NAD and NADP.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"nicotinamide mononucleotide transmembrane transporter activity","secondary_identifiers":["GO:0015664"],"synonyms":[{"name":"nicotinamide mononucleotide permease activity","type":"related"},{"name":"nicotinamide ribonucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015663"}


id: GO:0034918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methylhexanoyl-CoA = 2-methyl-3-oxohexanoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxy-2-methylhexanoyl-CoA dehydrogenase activity","termid":"GO:0034918"}


id: PATO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000738 enzyme function value (obsolete PATO:0000738)","termid":"PATO:0000738"}


id: PBO:0059391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S25","termid":"PBO:0059391"}


id: FYPO:0000311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a normal germ tube, but does not septate or go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with normal germ tube morphology","termid":"FYPO:0000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination with normal, unseptated germ tube morphology","synonyms":[{"name":"inviable following spore germination with normal, unseptated germ tube morphology","type":"exact"},{"name":"inviable germinated spore with normal, unseptated germ tube morphology","type":"exact"},{"name":"lethal after spore germination with normal, unseptated germ tube morphology","type":"exact"}],"termid":"FYPO:0000311"}


id: PBO:0082212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 1 subunit of the 20S proteasome; involved in the degradation of ubiquitinated substrates; 20S proteasome is the core complex of the 26S proteasome; essential for growth; detected in the mitochondria","termid":"PBO:0082212"}


id: GO:0070199
data:
  {"annotated_genes":["SJAG_01297","SJAG_02336","SJAG_03540","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99358,95898,103625,113756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070199","terms_by_termid":{"GO:0140210":null}}


id: PBO:0049887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 6","termid":"PBO:0049887"}


id: PBO:0034141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_overlaps","termid":"PBO:0034141"}


id: PBO:0054247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1629","termid":"PBO:0054247"}


id: PBO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUSP5 divergent transcript","termid":"PBO:0045551"}


id: PBO:0058956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase interacting serine/threonine kinase 2 pseudogene 1","termid":"PBO:0058956"}


id: PBO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 4","termid":"PBO:0080169"}


id: PBO:0052294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 3 like, subcortical maternal complex member","termid":"PBO:0052294"}


id: PBO:0069737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1018, pseudogene","termid":"PBO:0069737"}


id: FYPO:0003995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0000293","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0005447"],"is_obsolete":false,"name":"abnormal DNA primase activity","termid":"FYPO:0003995"}


id: GO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of macrophage inflammatory protein-1 gamma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"macrophage inflammatory protein-1 gamma production","termid":"GO:0071607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"regulation of CCL9 production","type":"exact"},{"name":"regulation of MIP-1g production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071646"}


id: PBO:0072067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 5","termid":"PBO:0072067"}


id: GO:0042267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:add","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated cytotoxicity","synonyms":[{"name":"NK cell mediated cell death","type":"exact"},{"name":"NK cell mediated cell killing","type":"exact"},{"name":"NK cell mediated cytolysis","type":"related"},{"name":"NK cell mediated cytotoxicity","type":"exact"},{"name":"killer activity","type":"related"},{"name":"natural killer cell mediated cell death","type":"exact"},{"name":"natural killer cell mediated cell killing","type":"exact"},{"name":"natural killer cell mediated cytolysis","type":"related"},{"name":"natural killer-cell mediated cytolysis","type":"related"}],"termid":"GO:0042267"}


id: PBO:0079222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 1","termid":"PBO:0079222"}


id: GO:0061434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of replicative cell aging through a mechanism that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a caloric restriction stimulus.","definition_xrefs":["PMID:17914901","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of replicative cell aging by regulation of transcription from RNA polymerase II promoter in response to caloric restriction (obsolete GO:0061434)","termid":"GO:0061434"}


id: GO:1903027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opsonization.","definition_xrefs":["PMID:22333221","GOC:BHF","GOC:TermGenie","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of opsonization","termid":"GO:1903027"}


id: GO:0021907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in spinal cord anterior/posterior pattern formation","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021907"}


id: GO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a photoreceptor cell found in the ocellus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}


id: GO:1903479
data:
  {"annotated_genes":["SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76459],"is_not":false,"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"Any actin filament organization that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150","GO:0044085","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903479","terms_by_termid":{"GO:1903479":null}}


id: FYPO:0000295
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[114484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[114306],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[114472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[114310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[114252,114274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[114208],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[114505],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[114408,114473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[114307],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects cytoskeleton organization. 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id: GO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"},{"relation_name":"positively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cortisol secretion","synonyms":[{"name":"activation of cortisol secretion","type":"narrow"},{"name":"stimulation of cortisol secretion","type":"narrow"},{"name":"up regulation of cortisol secretion","type":"exact"},{"name":"up-regulation of cortisol secretion","type":"exact"},{"name":"upregulation of cortisol secretion","type":"exact"}],"termid":"GO:0051464"}


id: PBO:0060268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 2","termid":"PBO:0060268"}


id: GO:1990674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the cis portion of the Golgi complex.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna membrane","termid":"GO:0032580"},{"relation_name":"part_of","term_name":"Golgi cis cisterna","termid":"GO:0000137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"Golgi cis cisterna membrane","synonyms":[{"name":"Golgi apparatus cis cisterna membrane","type":"exact"},{"name":"cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990674"}


id: PBO:0040406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 7","termid":"PBO:0040406"}


id: PBO:0090354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit Bet4","termid":"PBO:0090354"}


id: FYPO:0003356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to papuamide B during mating. Cells stop growing (and may die) at a concentration of papuamide B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:24514900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to papuamide B during mating","synonyms":[{"name":"sensitive to papuamide B during conjugation with cellular fusion","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids during mating","type":"broad"}],"termid":"FYPO:0003356"}


id: GO:0032088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB.","definition_xrefs":["GOC:rl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of NF-kappaB transcription factor activity","synonyms":[{"name":"NF-kappaB inhibitor","type":"related"},{"name":"inhibition of NF-kappaB transcription factor","type":"exact"}],"termid":"GO:0032088"}


id: PR:O14193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug69 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 69 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.05","synonyms":[{"name":"Spom972h-mug69","type":"exact"}],"termid":"PR:O14193"}


id: PBO:0078242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 22-1 (pseudogene)","termid":"PBO:0078242"}


id: GO:0097227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.","definition_xrefs":["MP:0009834","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm annulus","termid":"GO:0097227"}


id: GO:0043086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of an enzyme.","definition_xrefs":["GOC:vw","GOC:ebc","GOC:jl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catalytic activity","secondary_identifiers":["GO:0048553"],"synonyms":[{"name":"down regulation of enzyme activity","type":"exact"},{"name":"down regulation of metalloenzyme activity","type":"narrow"},{"name":"down-regulation of enzyme activity","type":"exact"},{"name":"down-regulation of metalloenzyme activity","type":"exact"},{"name":"downregulation of enzyme activity","type":"exact"},{"name":"downregulation of metalloenzyme activity","type":"narrow"},{"name":"inhibition of enzyme activity","type":"narrow"},{"name":"inhibition of metalloenzyme activity","type":"narrow"},{"name":"negative regulation of enzyme activity","type":"exact"},{"name":"negative regulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043086"}


id: PR:O13837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 4-aminobutyrate aminotransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.07","secondary_identifiers":["UniProtKB:O13837"],"synonyms":[{"name":"GABA aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GABA transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GABA-AT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ABAT","type":"exact"},{"name":"gamma-amino-N-butyrate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13837"}


id: PBO:0078167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta constant 2","termid":"PBO:0078167"}


id: PBO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhophilin-2 homolog (predicted)","termid":"PBO:0002131"}


id: GO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + H2O = 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate + formate + H+.","definition_xrefs":["RHEA:27282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"2-amino-5-formylamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one formate-lyase activity","secondary_identifiers":["EC:3.5.1.102"],"termid":"GO:0043729"}


id: PBO:0045044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 4","termid":"PBO:0045044"}


id: GO:2000782
data:
  {"annotated_genes":["SJAG_02536","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102997,111762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000782","terms_by_termid":{"GO:2000784":null}}


id: GO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hypertrophy","termid":"GO:0014743"}


id: PBO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 2","termid":"PBO:0061914"}


id: FYPO:0000302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a cell's response to mating pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal response to pheromone","synonyms":[{"name":"abnormal response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"defective response to pheromone","type":"exact"}],"termid":"FYPO:0000302"}


id: PBO:0027220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_sister_chromatid_separation","termid":"PBO:0027220"}


id: PBO:0034708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain metallopeptidase implicated in DNA repair Wss1 (predicted)","termid":"PBO:0034708"}


id: SO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The variable region of an immunoglobulin polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_region","termid":"SO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"V_region","synonyms":[{"name":"INSDC_feature:V_region","type":"exact"},{"name":"V region","type":"exact"}],"termid":"SO:0001833"}


id: PBO:0044914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGAT2 divergent transcript","termid":"PBO:0044914"}


id: GO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"negatively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axial mesodermal cell fate determination","synonyms":[{"name":"down regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of axial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of axial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048325"}


id: GO:1904007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["PMID:11211872","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipase activity","termid":"GO:0010518"},{"relation_name":"is_a","term_name":"regulation of phospholipase D activity","termid":"GO:1904005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipase D activity","synonyms":[{"name":"activation of choline phosphatase activity","type":"narrow"},{"name":"activation of lecithinase D activity","type":"narrow"},{"name":"activation of lipophosphodiesterase II activity","type":"narrow"},{"name":"activation of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"activation of phospholipase D activity","type":"narrow"},{"name":"positive regulation of choline phosphatase activity","type":"exact"},{"name":"positive regulation of lecithinase D activity","type":"exact"},{"name":"positive regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"positive regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of choline phosphatase activity","type":"exact"},{"name":"up regulation of lecithinase D activity","type":"exact"},{"name":"up regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of phospholipase D activity","type":"exact"},{"name":"up-regulation of choline phosphatase activity","type":"exact"},{"name":"up-regulation of lecithinase D activity","type":"exact"},{"name":"up-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up-regulation of phospholipase D activity","type":"exact"},{"name":"upregulation of choline phosphatase activity","type":"exact"},{"name":"upregulation of lecithinase D activity","type":"exact"},{"name":"upregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"upregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"upregulation of phospholipase D activity","type":"exact"}],"termid":"GO:1904007"}


id: PBO:0063909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta","termid":"PBO:0063909"}


id: PBO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 20","termid":"PBO:0052506"}


id: PBO:0060352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVIIIB","termid":"PBO:0060352"}


id: PBO:0049624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 27","termid":"PBO:0049624"}


id: PBO:0089355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-diphospho-sugar transferase, unknown specificity","termid":"PBO:0089355"}


id: FYPO:0002579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature transfer RNA (tRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level","termid":"FYPO:0005999"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"altered mature tRNA level during vegetative growth","synonyms":[{"name":"abnormal tRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature tRNA level during vegetative growth","type":"exact"},{"name":"altered mature cellular transfer RNA level during vegetative growth","type":"exact"},{"name":"altered mature tRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature tRNA transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0002579"}


id: PBO:0091030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10","termid":"PBO:0091030"}


id: GO:0046206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trypanothione (N1,N6,-bis(glutathionyl)spermidine), an essential redox intermediate in intracellular thiol redox regulation which also plays a role in protecting against oxidative stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"trypanothione metabolic process","synonyms":[{"name":"trypanothione metabolism","type":"exact"}],"termid":"GO:0046206"}


id: PBO:0040822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2","termid":"PBO:0040822"}


id: PBO:0061271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 3","termid":"PBO:0061271"}


id: PBO:0017948
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SEC12","termid":"PBO:0017948"}


id: PBO:0012221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 3 (predicted)","termid":"PBO:0012221"}


id: GO:1900330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from trimethylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from trimethylamine","termid":"GO:2001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from trimethylamine","termid":"GO:1900330"}


id: PBO:0035879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0035879"}


id: PBO:0089322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase Put1","termid":"PBO:0089322"}


id: GO:0032436
data:
  {"annotated_genes":["SJAG_01533","SJAG_00642","SJAG_03048","SJAG_00071","SJAG_02723","SJAG_01210","SJAG_03699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76665,97858,102053,104244,106994,112230],"is_not":false,"summary":null,"term":"GO:0032436"},{"annotations":[84707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"is_a","term_name":"positive regulation of proteasomal protein catabolic process","termid":"GO:1901800"},{"relation_name":"is_a","term_name":"positive regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000060"},{"relation_name":"positively_regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_01533":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"activation of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"stimulation of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"up regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"up-regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"upregulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"}],"termid":"GO:0032436","terms_by_termid":{"GO:0032436":null,"GO:1905786":null}}


id: PBO:0058696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6824","termid":"PBO:0058696"}


id: PBO:0017697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein Cwh43 (predicted)","termid":"PBO:0017697"}


id: PBO:0082926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic 60S subunit biogenesis factor; associates with pre-60S particles; similar to Rei1p and shares partially redundant function in cytoplasmic 60S subunit maturation; contains dispersed C2H2 zinc finger domains","termid":"PBO:0082926"}


id: PBO:0073351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 10","termid":"PBO:0073351"}


id: GO:0016508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a medium-chain (3S)-3-hydroxyacyl-CoA = a medium-chain (2E)-enoyl-CoA + H2O. A long-chain acyl-CoA is an acyl-CoA thioester where the acyl chain contains 13 to 22 carbon atoms.","definition_xrefs":["RHEA:71647"],"gene_count":0,"genotype_count":0,"name":"obsolete long-chain-enoyl-CoA hydratase activity (obsolete GO:0016508)","synonyms":[{"name":"long-chain enoyl coenzyme A hydratase activity","type":"related"},{"name":"long-chain-(3S)-3-hydroxyacyl-CoA hydro-lyase activity","type":"related"}],"termid":"GO:0016508"}


id: GO:1901904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyrocidine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:9352938","UniPathway:UPA00180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"tyrocidine metabolic process","termid":"GO:1901902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine biosynthetic process","synonyms":[{"name":"tyrocidine anabolism","type":"exact"},{"name":"tyrocidine biosynthesis","type":"exact"},{"name":"tyrocidine formation","type":"exact"},{"name":"tyrocidine synthesis","type":"exact"}],"termid":"GO:1901904"}


id: GO:0099169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099169)","termid":"GO:0099169"}


id: GO:1901403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen compound metabolic process","termid":"GO:0051173"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole metabolic process","synonyms":[{"name":"activation of tetrapyrrole metabolic process","type":"narrow"},{"name":"activation of tetrapyrrole metabolism","type":"exact"},{"name":"positive regulation of tetrapyrrole metabolism","type":"exact"},{"name":"up regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"up regulation of tetrapyrrole metabolism","type":"exact"},{"name":"up-regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"up-regulation of tetrapyrrole metabolism","type":"exact"},{"name":"upregulation of tetrapyrrole metabolic process","type":"exact"},{"name":"upregulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901403"}


id: FYPO:0007596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitophagy","termid":"FYPO:0000500"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitophagy during nitrogen starvation","synonyms":[{"name":"decreased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"reduced autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007596"}


id: PBO:0084035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell surface glycoprotein (flocculin); required for pseudohyphal and invasive growth, flocculation, and biofilm formation; major determinant of colony morphology; QTL that controls chronological life span; carries intragenic tandem repeats that are expanded in different strains; required for formation of fibrous interconnections between cells; role in co-flocculation with other yeast species; cleaved and shed from cells, contributing to their surface properties","termid":"PBO:0084035"}


id: PBO:0054358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1751","termid":"PBO:0054358"}


id: GO:0000381
data:
  {"annotated_genes":["SJAG_04061","SJAG_04782"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84542,90980],"is_not":false,"summary":null,"term":"GO:0000381"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"alternative mRNA splicing, via spliceosome","termid":"GO:0000380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04061":null,"SJAG_04782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of alternative mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of alternative nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"splice site selection","type":"broad"}],"termid":"GO:0000381","terms_by_termid":{"GO:0000381":null}}


id: GO:0016474
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sodium ion-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of sodium ions across a concentration gradient. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis.","definition_xrefs":["GOC:mah","PMID:15802565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion-transporting two-sector ATPase complex","termid":"GO:0016472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium ion-transporting V-type ATPase complex","synonyms":[{"name":"sodium-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0016474"}


id: PBO:0030075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_valine_import","termid":"PBO:0030075"}


id: GO:0071431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains transfer RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071431)","synonyms":[{"name":"tRNA-containing RNP export from nucleus","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071431"}


id: PBO:0064691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 27","termid":"PBO:0064691"}


id: PBO:0066632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein like 1","termid":"PBO:0066632"}


id: GO:1900473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:8056324","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900473)","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900473"}


id: PBO:0065248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20A","termid":"PBO:0065248"}


id: PBO:0061812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 2 Y-linked","termid":"PBO:0061812"}


id: GO:0106350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 5 isopentenyl diphosphate = 5 diphosphate + all-trans-octaprenyl diphosphate.","definition_xrefs":["PMID:8037730","RHEA:27798","PMID:3519603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"octaprenyl pyrophosphate synthase activity","secondary_identifiers":["EC:2.5.1.90"],"termid":"GO:0106350"}


id: PBO:0056106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 1","termid":"PBO:0056106"}


id: GO:0018610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dibenzofuran + NADH + H+ + O2 = 2,2',3-trihydroxybiphenyl + NAD+.","definition_xrefs":["MetaCyc:R606-RXN","RHEA:42460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dibenzofuran 4,4a-dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0030"],"termid":"GO:0018610"}


id: PBO:0086477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086477"}


id: GO:1905652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of artery morphogenesis.","definition_xrefs":["PMID:27389411","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"},{"relation_name":"negatively_regulates","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of artery morphogenesis","synonyms":[{"name":"down regulation of arterial morphogenesis","type":"exact"},{"name":"down regulation of arteriogenesis","type":"exact"},{"name":"down regulation of artery morphogenesis","type":"exact"},{"name":"down-regulation of arterial morphogenesis","type":"exact"},{"name":"down-regulation of arteriogenesis","type":"exact"},{"name":"down-regulation of artery morphogenesis","type":"exact"},{"name":"downregulation of arterial morphogenesis","type":"exact"},{"name":"downregulation of arteriogenesis","type":"exact"},{"name":"downregulation of artery morphogenesis","type":"exact"},{"name":"inhibition of arterial morphogenesis","type":"narrow"},{"name":"inhibition of arteriogenesis","type":"narrow"},{"name":"inhibition of artery morphogenesis","type":"narrow"},{"name":"negative regulation of arterial morphogenesis","type":"exact"},{"name":"negative regulation of arteriogenesis","type":"exact"}],"termid":"GO:1905652"}


id: RO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a transport process or transporter activity and the outcome of this p is to move c from one location to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports_or_maintains_localization_of","termid":"RO:0002313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports","termid":"RO:0002020"}


id: PBO:0071022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 24","termid":"PBO:0071022"}


id: GO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the heart septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in heart chamber septation","termid":"GO:0003200"}


id: PBO:0085020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinate phosphoribosyltransferase; acts in the salvage pathway of NAD+ biosynthesis; required for silencing at rDNA and telomeres and has a role in silencing at mating-type loci; localized to the nucleus","termid":"PBO:0085020"}


id: PBO:0060839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament heavy chain","termid":"PBO:0060839"}


id: PBO:0062046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 33","termid":"PBO:0062046"}


id: PBO:0028484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity","termid":"PBO:0028484"}


id: PBO:0046610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 12","termid":"PBO:0046610"}


id: PBO:0091755
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELL","termid":"PBO:0091755"}


id: GO:1904648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:18538940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to rotenone","termid":"GO:1904647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rotenone","termid":"GO:1904648"}


id: GO:1900050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone exchange (obsolete GO:1900050)","synonyms":[{"name":"down regulation of histone chaperone","type":"related"},{"name":"down regulation of histone exchange","type":"related"},{"name":"down regulation of histone replacement","type":"exact"},{"name":"down-regulation of histone chaperone","type":"related"},{"name":"down-regulation of histone exchange","type":"related"},{"name":"down-regulation of histone replacement","type":"exact"},{"name":"downregulation of histone chaperone","type":"related"},{"name":"downregulation of histone exchange","type":"related"},{"name":"downregulation of histone replacement","type":"exact"},{"name":"inhibition of histone chaperone","type":"related"},{"name":"inhibition of histone exchange","type":"related"},{"name":"inhibition of histone replacement","type":"exact"},{"name":"negative regulation of histone chaperone","type":"related"},{"name":"negative regulation of histone replacement","type":"exact"}],"termid":"GO:1900050"}


id: MOD:00512
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex3","definition_xrefs":["PubMed:5490222","RESID:AA0151#var","PubMed:111247","PubMed:1694179","Unimod:144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex3 N4-glycosylated asparagine","synonyms":[{"name":"Hex(3)","type":"related"},{"name":"Hex3","type":"related"}],"termid":"MOD:00512"}


id: PBO:0028469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_interphase_microtubule_nucleation","termid":"PBO:0028469"}


id: PBO:0061458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRF2 regulation associated lncRNA","termid":"PBO:0061458"}


id: GO:2000077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pancreatic B cell development.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell development","termid":"GO:2000074"},{"relation_name":"negatively_regulates","term_name":"type B pancreatic cell development","termid":"GO:0003323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type B pancreatic cell development","synonyms":[{"name":"negative regulation of pancreatic B cell development","type":"exact"},{"name":"negative regulation of pancreatic beta cell development","type":"exact"}],"termid":"GO:2000077"}


id: PBO:0029617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029617"}


id: PR:P36596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A squalene synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02641","PRO:DNx","PANTHER:PTHR11626:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.05c","secondary_identifiers":["UniProtKB:P36596"],"synonyms":[{"name":"FPP:FPP farnesyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SQS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FDFT1","type":"exact"},{"name":"farnesyl-diphosphate farnesyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36596"}


id: PBO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-Alpha-Acetyltransferase","termid":"PBO:0002204"}


id: PR:Q10240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug133 gene.","definition_xrefs":["UniProtKB:Q10240","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 133 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.07","synonyms":[{"name":"Spom972h-mug133","type":"exact"}],"termid":"PR:Q10240"}


id: GO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the antennal joint are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"antennal joint development","termid":"GO:0048098"},{"relation_name":"part_of","term_name":"antennal morphogenesis","termid":"GO:0048800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal joint morphogenesis","termid":"GO:0048801"}


id: PBO:0005263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephospho-CoA kinase (predicted)","termid":"PBO:0005263"}


id: GO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hatching of the cellular blastocyst from the zona pellucida.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hatching","termid":"GO:0035188"},{"relation_name":"part_of","term_name":"blastocyst development","termid":"GO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastocyst hatching","termid":"GO:0001835"}


id: GO:1904324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15937517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"negatively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"down regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"down-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"downregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"inhibition of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"negative regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904324"}


id: GO:0000107
data:
  {"annotated_genes":["SJAG_03775"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75214],"is_not":false,"summary":null,"term":"GO:0000107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + aminoimidazole carboxamide ribonucleotide + L-glutamate + 2 H+.","definition_xrefs":["RHEA:24793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:GLUTAMIDOTRANS-RXN"],"synonyms":[{"name":"glutamine amidotransferase:cyclase activity","type":"broad"},{"name":"imidazole glycerol phosphate synthase activity","type":"exact"},{"name":"imidazole-glycerol-phosphate synthase activity","type":"related"},{"name":"imidazoleglycerol phosphate synthase activity","type":"exact"}],"termid":"GO:0000107","terms_by_termid":{"GO:0000107":null}}


id: PBO:0047794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXF2 divergent transcript","termid":"PBO:0047794"}


id: PBO:0076377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAB3 antisense RNA 1","termid":"PBO:0076377"}


id: PBO:0059332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 1","termid":"PBO:0059332"}


id: PBO:0076609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 27, pseudogene","termid":"PBO:0076609"}


id: GO:0140412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: zinc(out) + HCO3-(out) = zinc(in) + HCO3-(in).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"},{"relation_name":"is_a","term_name":"monoatomic cation:bicarbonate symporter activity","termid":"GO:0140410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"zinc:bicarbonate symporter activity","termid":"GO:0140412"}


id: GO:0035556
data:
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