# terms

id: PR:Q9Y7J2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lam2 gene.","definition_xrefs":["UniProtKB:Q9Y7J2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1778.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.05c","synonyms":[{"name":"Spom972h-lam2","type":"exact"}],"termid":"PR:Q9Y7J2"}


id: GO:1902528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein linear polyubiquitination.","definition_xrefs":["PMID:21931591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein linear polyubiquitination","termid":"GO:0097039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein linear polyubiquitination","synonyms":[{"name":"regulation of M1 linkage","type":"narrow"}],"termid":"GO:1902528"}


id: PBO:0085874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified as a high-copy suppressor of a dbp5 mutation; GFD2 has a paralog, YDR514C, that arose from the whole genome duplication","termid":"PBO:0085874"}


id: PBO:0039122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1 like","termid":"PBO:0039122"}


id: PBO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sid2-Mob1 kinase complex regulatory subunit Mob1","termid":"PBO:0003204"}


id: FYPO:0001633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-phenylalanine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular phenylalanine level","termid":"FYPO:0001642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar phenylalanine level","synonyms":[{"name":"normal level of phenylalanine in vacuole","type":"exact"},{"name":"normal vacuolar L-phenylalanine level","type":"exact"},{"name":"normal vacuolar phenylalanine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar phenylalanine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001633"}


id: PBO:0000385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9","termid":"PBO:0000385"}


id: PBO:0003546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1 (predicted)","termid":"PBO:0003546"}


id: GO:0018600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-pinene + O2 + 2 H+ + 2 e- = H2O + myrtenol.","definition_xrefs":["UM-BBD_reactionID:r0709"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-pinene dehydrogenase activity (obsolete GO:0018600)","termid":"GO:0018600"}


id: PBO:0073326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 2 (gene/pseudogene)","termid":"PBO:0073326"}


id: RO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is ubiquitously expressed in y if and only if x is expressed in y, and the majority of cells in y express x","direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_in","termid":"RO:0002206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously_expressed_in","termid":"RO:0002291"}


id: FYPO:0006720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to osmotic stress.","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"normal cell cycle delay following osmotic stress","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to osmotic stress","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006720"}


id: GO:0001841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"neural tube development","termid":"GO:0021915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tube formation","secondary_identifiers":["Wikipedia:Neurulation","GO:0001679"],"synonyms":[{"name":"neural tube morphogenesis","type":"exact"},{"name":"neurulation","type":"exact"}],"termid":"GO:0001841"}


id: SO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes a change at the 5th base pair after the start of the intron in the orientation of the transcript.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_5th_base_variant","synonyms":[{"name":"splice donor 5th base variant","type":"exact"}],"termid":"SO:0001787"}


id: PBO:0038313
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_name","termid":"PBO:0038313"}


id: PBO:0073459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A2","termid":"PBO:0073459"}


id: GO:0051126
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"negative regulation of actin nucleation","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"down regulation of actin nucleation","type":"exact"},{"name":"down-regulation of actin nucleation","type":"exact"},{"name":"downregulation of actin nucleation","type":"exact"},{"name":"inhibition of actin nucleation","type":"narrow"}],"termid":"GO:0051126","terms_by_termid":{"GO:0034316":null}}


id: GO:0033781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NADPH + O2 = (24S)-24-hydroxycholesterol + H2O + NADP+.","definition_xrefs":["EC:1.14.14.25","RHEA:22716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cholesterol 24-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.98-RXN","Reactome:R-HSA-192061","KEGG_REACTION:R07207"],"synonyms":[{"name":"CYP46A1","type":"related"},{"name":"CYP46","type":"related"},{"name":"cholesterol 24-monooxygenase activity","type":"related"},{"name":"cholesterol 24S-hydroxylase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (24-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 46A1","type":"related"}],"termid":"GO:0033781"}


id: GO:0004931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when ATP is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["GOC:bf","PMID:9755289","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"extracellularly ATP-gated monoatomic cation channel activity","secondary_identifiers":["Reactome:R-HSA-877187"],"synonyms":[{"name":"P2X receptor","type":"related"},{"name":"extracellularly ATP-gated cation channel activity","type":"broad"},{"name":"purinoceptor","type":"broad"},{"name":"purinoreceptor","type":"broad"}],"termid":"GO:0004931"}


id: PBO:0076524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 37 pseudogene","termid":"PBO:0076524"}


id: PBO:0054586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1989","termid":"PBO:0054586"}


id: PATO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation(from_normal)","termid":"PATO:0000069"}


id: PBO:0090016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (human ERCC3) subunit Ptr8","termid":"PBO:0090016"}


id: GO:0003989
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76373],"is_not":false,"summary":null,"term":"GO:0003989"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.","definition_xrefs":["EC:6.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA carboxylase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-200555","MetaCyc:ACETYL-COA-CARBOXYLTRANSFER-RXN","Reactome:R-HSA-75851","Reactome:R-HSA-8876889","RHEA:11308"],"synonyms":[{"name":"acetyl coenzyme A carboxylase activity","type":"related"},{"name":"acetyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"}],"termid":"GO:0003989","terms_by_termid":{"GO:0003989":null}}


id: PBO:0077333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 70","termid":"PBO:0077333"}


id: PR:Q9Y794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12087:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.13","secondary_identifiers":["UniProtKB:Q9Y794"],"synonyms":[{"name":"SPBP23A10.13","type":"related"},{"name":"Spom972h-ORC4","type":"exact"},{"name":"orp4","type":"related"}],"termid":"PR:Q9Y794"}


id: PATO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000775 learning value (obsolete PATO:0000775)","termid":"PATO:0000775"}


id: PBO:0053849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1118","termid":"PBO:0053849"}


id: PBO:0042438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 binding protein kinase alpha","termid":"PBO:0042438"}


id: PBO:0072162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 39","termid":"PBO:0072162"}


id: PBO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expression of nus1 and rer2 functionally complements a triple deletion of NUS1, RER2 and SRT1 in S. cerevisiae","termid":"PBO:0016985"}


id: PBO:0031121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0031121"}


id: PBO:0073741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 1","termid":"PBO:0073741"}


id: PBO:0048836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3","termid":"PBO:0048836"}


id: PBO:0073040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 3","termid":"PBO:0073040"}


id: FYPO:0005267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to aluminium ions. Cells stop growing (and may die) at a concentration of aluminium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to aluminium","synonyms":[{"name":"hypersensitive to aluminium","type":"exact"},{"name":"sensitive to aluminium during mitotic cell cycle","type":"related"},{"name":"sensitive to aluminium during vegetative growth","type":"exact"},{"name":"sensitive to aluminium ions","type":"exact"},{"name":"sensitive to aluminum","type":"exact"}],"termid":"FYPO:0005267"}


id: PBO:0065801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A pseudogene 1","termid":"PBO:0065801"}


id: GO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to insulin-like growth factor-1 (IGF-1) and type I insulin-like growth factor receptor (IGF1R). IGF1R is a heterotetramer that consists of two alpha-subunits and two beta-subunits.","definition_xrefs":["GOC:BHF","GOC:ebc","PMID:19578119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphav-beta3 integrin-IGF-1-IGF1R complex","termid":"GO:0035867"}


id: MOD:01747
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01747"}


id: SO:0000625
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region which upon binding of transcription factors, suppress the transcription of the gene or genes they control.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencer","secondary_identifiers":["http://en.wikipedia.org/wiki/Silencer_(DNA)"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:silencer","type":"exact"}],"termid":"SO:0000625"}


id: GO:0019471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline. The presence of hydroxyproline is essential to produce stable triple helical tropocollagen, hence the problems caused by ascorbate deficiency in scurvy. This unusual amino acid is also present in considerable amounts in the major glycoprotein of primary plant cell walls.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"4-hydroxyproline metabolic process","synonyms":[{"name":"4-hydroxyproline metabolism","type":"exact"}],"termid":"GO:0019471"}


id: MOD:01362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-thiophospho-L-serine.","definition_xrefs":["PubMed:11507762","Unimod:260#S","PubMed:12110917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-thiophospho-L-serine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01362"}


id: GO:1903597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gap junction assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","PMID:25017399","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of gap junction assembly","termid":"GO:1903596"},{"relation_name":"negatively_regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gap junction assembly","synonyms":[{"name":"down regulation of gap junction assembly","type":"exact"},{"name":"down-regulation of gap junction assembly","type":"exact"},{"name":"downregulation of gap junction assembly","type":"exact"},{"name":"inhibition of gap junction assembly","type":"narrow"}],"termid":"GO:1903597"}


id: GO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis stratification","termid":"GO:0060888"}


id: PBO:0039145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2 pseudogene 2","termid":"PBO:0039145"}


id: PR:O74438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.08c","synonyms":[{"name":"Spom972h-mcp2","type":"exact"}],"termid":"PR:O74438"}


id: GO:0060072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","PMID:17115074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"large conductance calcium-activated potassium channel activity","secondary_identifiers":["GO:0022895"],"synonyms":[{"name":"BK KCa channel activity","type":"exact"},{"name":"BK calcium-activated potassium channel activity","type":"exact"},{"name":"BK channel activity","type":"related"},{"name":"large conductance KCa channel activity","type":"exact"}],"termid":"GO:0060072"}


id: GO:0060994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the kidney progresses from its initial formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in kidney development (obsolete GO:0060994)","termid":"GO:0060994"}


id: PBO:0085852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); YOR305W is not an essential gene","termid":"PBO:0085852"}


id: GO:0047606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroxynitrile = cyanide + an aldehyde or ketone.","definition_xrefs":["PMID:3377504","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"hydroxynitrilase activity","secondary_identifiers":["MetaCyc:ACETONE-CYANHYDRIN-LYASE-RXN","GO:0046991","EC:4.1.2.47","https://github.com/geneontology/go-ontology/issues/16166"],"synonyms":[{"name":"alpha-hydroxynitrile lyase activity","type":"narrow"},{"name":"hydroxynitrile lyase activity","type":"exact"},{"name":"oxynitrilase activity","type":"related"}],"termid":"GO:0047606"}


id: GO:2001273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose import in response to insulin stimulus (obsolete GO:2001273)","synonyms":[{"name":"regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001273"}


id: SO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 7th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:19385636","PMID:24316985","PMID:27087541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK7_acetylation_site","synonyms":[{"name":"H2A.ZK7ac","type":"exact"},{"name":"H2AZK7 acetylation site","type":"exact"},{"name":"H2AZK7ac","type":"exact"}],"termid":"SO:0002146"}


id: GO:0031029
data:
  {"annotated_genes":["SJAG_03592","SJAG_00229","SJAG_03508","SJAG_03681","SJAG_00526","SJAG_03353","SJAG_01386","SJAG_00883","SJAG_00082","SJAG_02169","SJAG_04455","SJAG_04943","SJAG_02514","SJAG_03936","SJAG_03048","SJAG_04776","SJAG_06270","SJAG_01805","SJAG_01790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88488,72472,102620,86437,102925,87395,88567,105496,111091,89103,95104,96779,91245,100446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[89448,97861,85733,105835,83339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of septation initiation signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of septation initiation signaling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of septation initiation network","type":"exact"},{"name":"regulation of septation initiation signaling cascade","type":"related"},{"name":"regulation of septation initiation signalling","type":"exact"}],"termid":"GO:0031029","terms_by_termid":{"GO:0031030":null,"GO:0031031":null}}


id: SO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that contains a CDS but has no stop codon before the polyA site is reached.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSD_transcript","synonyms":[{"name":"non_stop_decay_transcript","type":"exact"}],"termid":"SO:0002130"}


id: GO:0008611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["PMID:15337120","ISBN:0198547684","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether lipid metabolic process","termid":"GO:0046485"},{"relation_name":"is_a","term_name":"glycerol ether biosynthetic process","termid":"GO:0046504"},{"relation_name":"is_a","term_name":"cellular lipid biosynthetic process","termid":"GO:0097384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ether lipid biosynthetic process","synonyms":[{"name":"ether lipid anabolism","type":"exact"},{"name":"ether lipid biosynthesis","type":"exact"},{"name":"ether lipid formation","type":"exact"},{"name":"ether lipid synthesis","type":"exact"},{"name":"plasmalogen biosynthetic process","type":"narrow"}],"termid":"GO:0008611"}


id: FYPO:0004277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of uracil DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal uracil DNA N-glycosylase activity","termid":"FYPO:0004277"}


id: PBO:0109399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 26, pseudogene","termid":"PBO:0109399"}


id: PBO:0057221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378i","termid":"PBO:0057221"}


id: PBO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 2","termid":"PBO:0051022"}


id: GO:0010681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of stilbene.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in stilbene metabolism (obsolete GO:0010681)","termid":"GO:0010681"}


id: PR:Q9UT50
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C821.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.03c","synonyms":[{"name":"Spom972h-slf1","type":"exact"}],"termid":"PR:Q9UT50"}


id: GO:0021846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of greater cell numbers in the forebrain due to cell division of progenitor cells.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in forebrain","termid":"GO:0021846"}


id: PR:Q9Y7S2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0612 protein C569.003 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.03","synonyms":[{"name":"Spom972h-SPCC569.03","type":"exact"}],"termid":"PR:Q9Y7S2"}


id: FYECO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which anidulafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ anidulafungin","termid":"FYECO:0000398"}


id: PBO:0049472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme B","termid":"PBO:0049472"}


id: GO:0140860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3R,4R)-4,2'-dihydroxyisoflavan + NADP+ = a (3R)-2'-hydroxyisoflavanone + H+ + NADPH.","definition_xrefs":["RHEA:56284","PMID:7625843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(3R)-2'-hydroxyisoflavanone reductase activity","synonyms":[{"name":"vestitone reductase activity","type":"narrow"}],"termid":"GO:0140860"}


id: PBO:0067972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 274","termid":"PBO:0067972"}


id: PBO:0055739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lemur tyrosine kinase 3","termid":"PBO:0055739"}


id: PBO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GRASP protein family Golgi protein (predicted)","termid":"PBO:0000502"}


id: PBO:0075858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 6, pseudogene","termid":"PBO:0075858"}


id: PBO:0068912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 155, pseudogene","termid":"PBO:0068912"}


id: PBO:0005245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2 (predicted)","termid":"PBO:0005245"}


id: PBO:0050682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 9","termid":"PBO:0050682"}


id: GO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenergic receptor, adenylate cyclase activating pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0071880"}


id: GO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate + H2O = 7,8-dihydroneopterin 3'-phosphate + H+.","definition_xrefs":["PMID:19746965","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7,8-dihydro-D-neopterin 2',3'-cyclic phosphate phosphodiesterase activity","termid":"GO:0044688"}


id: PBO:0059181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRE11 homolog, double strand break repair nuclease pseudogene 1","termid":"PBO:0059181"}


id: PBO:0012599
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD16","termid":"PBO:0012599"}


id: PBO:0059406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 3","termid":"PBO:0059406"}


id: GO:0014049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of glutamate.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate secretion","termid":"GO:0014048"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"glutamate secretion","termid":"GO:0014047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glutamate secretion","synonyms":[{"name":"activation of glutamate secretion","type":"narrow"},{"name":"stimulation of glutamate secretion","type":"narrow"},{"name":"up regulation of glutamate secretion","type":"exact"},{"name":"up-regulation of glutamate secretion","type":"exact"},{"name":"upregulation of glutamate secretion","type":"exact"}],"termid":"GO:0014049"}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: PBO:0004488
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates cyc1","termid":"PBO:0004488"}


id: GO:0015505
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91140],"is_not":false,"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: uracil(out) + cation(out) = uracil(in) + cation(in).","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil transmembrane transporter activity","termid":"GO:0015210"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"uracil:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil permease activity","type":"related"},{"name":"uracil:cation symporter activity","type":"broad"}],"termid":"GO:0015505","terms_by_termid":{"GO:0015505":null}}


id: GO:0032652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-1 production","secondary_identifiers":["GO:0045360","GO:0050704"],"synonyms":[{"name":"regulation of IL-1 production","type":"exact"},{"name":"regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 secretion","type":"narrow"}],"termid":"GO:0032652"}


id: PBO:0083161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene POL30","termid":"PBO:0083161"}


id: GO:0043551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphatidylinositol 3-kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an inositol lipid at the 3' position of the inositol ring.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043551)","synonyms":[{"name":"regulation of phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0043551"}


id: SO:1000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The changed codon has the same translation product as the original codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000057 sequence_variant_causing_synonymous_codon_change_in_transcript (obsolete SO:1000057)","synonyms":[{"name":"mutation causing synonymous codon change in transcript","type":"related"},{"name":"sequence variant causing synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000057"}


id: PBO:0079627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 O","termid":"PBO:0079627"}


id: PR:Q9Y7X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03309","PANTHER:PTHR11937:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein arp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.10","secondary_identifiers":["UniProtKB:Q9Y7X8"],"synonyms":[{"name":"Spom972h-ACTR5","type":"exact"}],"termid":"PR:Q9Y7X8"}


id: PBO:0074864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 49B","termid":"PBO:0074864"}


id: GO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the right horn of the sinus venosus from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right horn of sinus venosus development","termid":"GO:0061080"}


id: PR:G2TRL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B2.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.06","synonyms":[{"name":"Spom972h-SPAC1B2.06","type":"exact"}],"termid":"PR:G2TRL6"}


id: FYPO:0001387
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114357,114666,114667,114668],"is_not":false,"summary":null,"term":"FYPO:0001387"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are grown at a temperature higher than standard.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability at high temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased viability at high temperature","type":"exact"},{"name":"loss of cell population viability at high temperature","type":"exact"},{"name":"loss of viability at restrictive temperature","type":"related"},{"name":"reduced viability at high temperature","type":"exact"}],"termid":"FYPO:0001387","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0001387":null}}


id: PR:O14053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04369","PANTHER:PTHR13889:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 21 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.07","secondary_identifiers":["UniProtKB:O14053"],"synonyms":[{"name":"Spom972h-WDR36","type":"exact"},{"name":"U3 snoRNA-associated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14053"}


id: GO:1901545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a raffinose stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to raffinose","termid":"GO:1901545"}


id: PBO:0082890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase-activating kinase; required for passage through the cell cycle; phosphorylates and activates Cdc28p; nucleotide-binding pocket differs significantly from those of most other protein kinases; required for premeiotic DNA synthesis, expression of early and middle sporulation specific genes and direct phosphorylation of the Smk1p MAPK to regulate spore morphogenesis","termid":"PBO:0082890"}


id: PBO:0044275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 16","termid":"PBO:0044275"}


id: PBO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase (predicted)","termid":"PBO:0001092"}


id: PBO:0075872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 divergent transcript","termid":"PBO:0075872"}


id: PBO:0054206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1586","termid":"PBO:0054206"}


id: GO:1900151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:TermGenie","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071","GO:0044248"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","synonyms":[{"name":"regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900151"}


id: PBO:0045504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSP antisense RNA 1","termid":"PBO:0045504"}


id: PBO:0073538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2B","termid":"PBO:0073538"}


id: PBO:0075462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 13","termid":"PBO:0075462"}


id: GO:0008442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+.","definition_xrefs":["EC:1.1.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxyisobutyrate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-508473","Reactome:R-HSA-70885","MetaCyc:3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN","RHEA:17681"],"termid":"GO:0008442"}


id: PBO:0076553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 1","termid":"PBO:0076553"}


id: GO:1900221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid-beta clearance","synonyms":[{"name":"regulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900221"}


id: GO:0000710
data:
  {"annotated_genes":["SJAG_02187","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87422,103135],"is_not":false,"summary":null,"term":"GO:0000710"}]},"cv_name":"biological_process","definition":"A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules. Correction of the mismatch can result in non-Mendelian segregation of alleles following meiosis.","definition_xrefs":["GOC:elh","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair","termid":"GO:0006298"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01832":null,"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"meiotic mismatch repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000710","terms_by_termid":{"GO:0000710":null}}


id: GO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Development of a photoreceptor, a receptor that responds to light, in the adult Drosophila eye.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adult eye photoreceptor development (sensu Drosophila) (obsolete GO:0001753)","synonyms":[{"name":"adult eye photoreceptor development (sensu Drosophila)","type":"exact"}],"termid":"GO:0001753"}


id: GO:0050337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiosulfate + 2 glutathione = sulfite + glutathione disulfide + sulfide.","definition_xrefs":["EC:2.8.1.3","MetaCyc:THIOSULFATE--THIOL-SULFURTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"thiosulfate-thiol sulfurtransferase activity","secondary_identifiers":["Reactome:R-HSA-1655879","RHEA:14505"],"synonyms":[{"name":"glutathione-dependent thiosulfate reductase activity","type":"related"},{"name":"sulfane reductase activity","type":"related"},{"name":"sulfane sulfurtransferase activity","type":"related"},{"name":"thiosulfate:thiol sulfurtransferase activity","type":"related"},{"name":"thiosulphate-thiol sulphurtransferase activity","type":"exact"}],"termid":"GO:0050337"}


id: GO:0070044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-1a complex","synonyms":[{"name":"SNARE complex (Snap25, Stx1a, Vamp2)","type":"narrow"},{"name":"SNARE complex (Stx1a, SNAP25, VAMP)","type":"narrow"},{"name":"Snap25-Stx1a-Vamp2 complex","type":"narrow"},{"name":"Stx1a-SNAP25-VAMP complex","type":"narrow"}],"termid":"GO:0070044"}


id: PBO:0046145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 6","termid":"PBO:0046145"}


id: GO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytochelatin-metal-sulfur complex formation","synonyms":[{"name":"HWM phytochelatin complex formation","type":"related"},{"name":"high molecular weight phytochelatin complex formation","type":"related"}],"termid":"GO:0090424"}


id: FYPO:0002166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 3'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished polynucleotide 3'-phosphatase activity","synonyms":[{"name":"polynucleotide 3'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002166"}


id: PR:Q9URX7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein arginine N-methyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02088","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine N-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.07c","secondary_identifiers":["UniProtKB:Q9URX7"],"synonyms":[{"name":"Spom972h-PRMT1","type":"exact"},{"name":"type I PRMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type I protein arginine N-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URX7"}


id: PBO:0059458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minisatellite binding protein 2","termid":"PBO:0059458"}


id: GO:0052631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of a double bond between C8 and C9 of the long chain base of a sphingolipid. For example, sphinganine (d18:0) = 8-sphingenine (d18:1delta8); phytosphinganine (t18:0) = 8-phytosphingenine (t18:1delta8); and 4-sphingenine (18:1delta4) = 4,8-sphingadienine (d18:2delta4,8).","definition_xrefs":["PMID:17600137","PMID:9786850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sphingolipid delta-8 desaturase activity","secondary_identifiers":["RHEA:46268","MetaCyc:RXN-7798"],"termid":"GO:0052631"}


id: FYPO:0001801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype in which a cell is unable to survive at a high temperature at which wild-type cells survive.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable cell at high temperature (obsolete FYPO:0001801)","synonyms":[{"name":"lethal in cell at high temperature","type":"exact"}],"termid":"FYPO:0001801"}


id: PBO:0110047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phospholipid scramblase Pls1","termid":"PBO:0110047"}


id: FYPO:0000202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of cytokinetic cell separation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of cytokinetic cell separation","synonyms":[{"name":"abnormal regulation of cell separation after cytokinesis","type":"exact"},{"name":"abnormal regulation of cell separation following cytokinesis","type":"exact"},{"name":"abnormal regulation of cytokinetic cell separation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of cytokinetic cell separation during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic cytokinetic cell separation","type":"exact"}],"termid":"FYPO:0000202"}


id: FYPO:0007995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the old cell tip does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:15184402","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during mitotic interphase","termid":"FYPO:0003329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to old cell tip during mitotic interphase","termid":"FYPO:0007995"}


id: GO:0103011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + beta-D-fructofuranose 6-phosphate = mannosylfructose-phosphate + GDP.","definition_xrefs":["EC:2.4.1.246","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"mannosylfructose-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-9935","RHEA:26039"],"termid":"GO:0103011"}


id: GO:1902919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(5-hydroxyvalerate).","definition_xrefs":["PMID:21705209","GOC:TermGenie","GOC:mengo_curators","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(5-hydroxyvalerate) metabolic process","termid":"GO:1902918"},{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(5-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(5-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(5-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(5-hydroxyvalerate) formation","type":"exact"},{"name":"poly(5-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902919"}


id: PBO:0074593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 7A","termid":"PBO:0074593"}


id: GO:0070096
data:
  {"annotated_genes":["SJAG_03416","SJAG_02361"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70267,105721],"is_not":false,"summary":null,"term":"GO:0070096"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial outer membrane translocase complex.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02361":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0061024","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"TOM complex assembly","type":"exact"},{"name":"mitochondrion outer membrane translocase complex assembly","type":"exact"}],"termid":"GO:0070096","terms_by_termid":{"GO:0070096":null}}


id: PBO:0074718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 78","termid":"PBO:0074718"}


id: PBO:0083307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps a stand-alone long terminal repeat sequence whose presence indicates a retrotransposition event occurred here","termid":"PBO:0083307"}


id: FYPO:0002773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes an abnormal nuclear division after meiosis II is complete.","definition_xrefs":["PomBase:mah","PMID:23628763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"third meiotic division","synonyms":[{"name":"meiosis III","type":"related"},{"name":"meiosis termination defect","type":"exact"},{"name":"third meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002773"}


id: PBO:0081069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 2","termid":"PBO:0081069"}


id: SO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together regulatory regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_fusion","synonyms":[{"name":"regulatory region fusion","type":"exact"}],"termid":"SO:0001887"}


id: FYPO:0005453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal translocation that would result in the loss of one of two different alleles of a gene does not occur.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished break-induced loss of heterozygosity via chromosomal translocation","synonyms":[{"name":"abolished break-induced loss of heterozygosity via chromosomal translocation during mitotic cell cycle","type":"related"},{"name":"abolished break-induced loss of heterozygosity via chromosomal translocation during vegetative growth","type":"exact"},{"name":"break-induced loss of heterozygosity via chromosomal translocation abolished","type":"exact"}],"termid":"FYPO:0005453"}


id: PBO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase deficiency with cataracts","termid":"PBO:0004971"}


id: GO:0032932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of astral microtubules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule depolymerization","termid":"GO:0007026"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"negatively_regulates","term_name":"astral microtubule depolymerization","termid":"GO:0060172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of astral microtubule depolymerization","synonyms":[{"name":"astral microtubule stabilization","type":"exact"}],"termid":"GO:0032932"}


id: GO:0031654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of heat dissipation.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"heat dissipation","termid":"GO:0031653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heat dissipation","termid":"GO:0031654"}


id: PBO:0064613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 3","termid":"PBO:0064613"}


id: GO:0046296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycolate, the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolate metabolic process","termid":"GO:0009441"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"glycolate catabolic process","synonyms":[{"name":"glycolate breakdown","type":"exact"},{"name":"glycolate catabolism","type":"exact"},{"name":"glycolate degradation","type":"exact"}],"termid":"GO:0046296"}


id: PBO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein (predicted)","termid":"PBO:0005176"}


id: PBO:0053339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 207","termid":"PBO:0053339"}


id: GO:0045310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with a phosphorylated serine or threonine residue within a protein.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphoserine/phosphothreonine binding (obsolete GO:0045310)","synonyms":[{"name":"phosphoserine/phosphothreonine binding","type":"exact"}],"termid":"GO:0045310"}


id: GO:0043580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the periplasmic space, the region between the inner (cytoplasmic) and outer membrane in Gram-negative bacteria, or the inner membrane and cell wall in fungi.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periplasmic space organization","synonyms":[{"name":"periplasmic space organisation","type":"exact"},{"name":"periplasmic space organization and biogenesis","type":"exact"}],"termid":"GO:0043580"}


id: PBO:0046361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 3","termid":"PBO:0046361"}


id: PBO:0057385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548b","termid":"PBO:0057385"}


id: GO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of N-glycosidic bonds in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787","GO:0140098"],"is_obsolete":false,"name":"RNA glycosylase activity","termid":"GO:0030597"}


id: FYPO:0007415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is abnormal.","definition_xrefs":["GO:0000723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal telomere maintenance","synonyms":[{"name":"telomere maintenance defects","type":"exact"}],"termid":"FYPO:0007415"}


id: GO:0038010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the internalization of a signaling receptor activates or increases the frequency, rate or extent of signal transduction. Receptor internalization can enhance signaling by concentrating signaling molecules in one location, or by moving a ligand-activated receptor to the location of downstream signaling proteins. Endosomes for example can serve as important intracellular signaling platforms.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:19696798","PMID:17908284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of signal transduction by receptor internalization","termid":"GO:0038009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"positive regulation of signal transduction by receptor internalization","synonyms":[{"name":"positive regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038010"}


id: PBO:0004066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-fructose-6-phosphate transaminase (predicted)","termid":"PBO:0004066"}


id: SO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide match against a sequence from another organism.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cross_genome_match","synonyms":[{"name":"cross genome match","type":"exact"}],"termid":"SO:0000177"}


id: FYPO:0004298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide 5'-phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"}


id: GO:0071783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) cisternal network. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["PMID:16469703","PMID:20434336","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network organization","synonyms":[{"name":"ER cisternal network organisation","type":"exact"},{"name":"ER cisternal network organization","type":"exact"},{"name":"endoplasmic reticulum cisternal network organisation","type":"exact"}],"termid":"GO:0071783"}


id: GO:0015791
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72102,72797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of polyols, any polyhydric alcohol, across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"polyol transmembrane transport","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0015791","terms_by_termid":{"GO:1904679":null}}


id: PBO:0029453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_cell","termid":"PBO:0029453"}


id: PBO:0031394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_arginine","termid":"PBO:0031394"}


id: PBO:0071449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 55","termid":"PBO:0071449"}


id: GO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + phosphate = butanoyl phosphate + CoA.","definition_xrefs":["RHEA:20892","EC:2.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphate butyryltransferase activity","secondary_identifiers":["KEGG_REACTION:R01174","MetaCyc:PHOSPHATE-BUTYRYLTRANSFERASE-RXN"],"synonyms":[{"name":"butanoyl-CoA:phosphate butanoyltransferase activity","type":"related"},{"name":"phosphotransbutyrylase activity","type":"related"}],"termid":"GO:0050182"}


id: CHEBI:63041
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A manganese coordination entity in which manganese(II) is coordinated to two chloride ions.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese(II) chloride","termid":"CHEBI:63041"}


id: FYPO:0006922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the removal of a sliding clamp such as PCNA from DNA during replication is abnormal.","definition_xrefs":["GO:0090618","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal DNA clamp unloading","synonyms":[{"name":"abnormal DNA clamp unloading during mitotic cell cycle","type":"related"},{"name":"abnormal DNA clamp unloading during vegetative growth","type":"exact"},{"name":"abnormal PCNA unloading","type":"related"}],"termid":"FYPO:0006922"}


id: PBO:0029046
data:
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id: GO:0007346
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id: GO:0072227
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id: GO:0060320
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id: PBO:0067619
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id: PBO:0043865
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id: PBO:0068828
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id: GO:0047602
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id: PBO:0081517
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id: PBO:0003464
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id: PBO:0046729
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id: GO:0000096
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id: GO:0035756
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id: SO:0002321
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id: MOD:01688
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to one of the diastereomeric 3-hydroxy-L-asparagine residues.","definition_xrefs":["OMSSA:61","Unimod:35#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-asparagine","synonyms":[{"name":"3HyAsn","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"hydroxylationn","type":"exact"},{"name":"monohydroxylated asparagine","type":"exact"}],"termid":"MOD:01688"}


id: GO:1990728
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the assembly of the mitotic checkpoint complex that in turn inhibits the anaphase promoting complex/cyclosome (APC/C). The MAD1 dimer recruits the open form of MAD2 (O-MAD2) turning it into the closed form (C-MAD2) upon binding. C-MAD2 inhibits CDC20, a member of the APC/C, upon release from the MAD1-MAD2 complex.","definition_xrefs":["GOC:bhm","PMID:12006501","PMID:22898774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint MAD1-MAD2 complex","synonyms":[{"name":"MAD1-MAD2 complex","type":"exact"}],"termid":"GO:1990728"}


id: PBO:0003041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine/adenosine deaminase family (predicted)","termid":"PBO:0003041"}


id: GO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of MyD88-independent toll-like receptor signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of MyD88-independent toll-like receptor signaling pathway","termid":"GO:0034127"},{"relation_name":"positively_regulates","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MyD88-independent toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of MyD88-independent TLR signaling pathway","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034129"}


id: PBO:0058258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4636","termid":"PBO:0058258"}


id: PR:Q9HDV8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline-rich protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P19A11.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.02c","secondary_identifiers":["UniProtKB:Q9HDV8"],"synonyms":[{"name":"Spom972h-PROL1","type":"exact"}],"termid":"PR:Q9HDV8"}


id: GO:0070959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070955"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of fungus","synonyms":[{"name":"down regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"downregulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"inhibition of neutrophil mediated killing of fungus","type":"narrow"}],"termid":"GO:0070959"}


id: PBO:0066928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 230","termid":"PBO:0066928"}


id: GO:0004850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"uridine phosphorylase activity","secondary_identifiers":["Reactome:R-HSA-74372","Reactome:R-HSA-74376","RHEA:24388","MetaCyc:URPHOS-RXN"],"synonyms":[{"name":"UPH","type":"related"},{"name":"UPase activity","type":"related"},{"name":"UrdPase activity","type":"related"},{"name":"pyrimidine phosphorylase activity","type":"broad"},{"name":"uridine:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0004850"}


id: GO:0102882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = beta-acoradiene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-acoradiene synthase activity","secondary_identifiers":["MetaCyc:RXN-8423"],"termid":"GO:0102882"}


id: PBO:0003549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein Rtn1","termid":"PBO:0003549"}


id: FYPO:0003894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to rotenone. Cells stop growing (and may die) at a concentration of rotenone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to rotenone","synonyms":[{"name":"hypersensitive to rotenone","type":"exact"},{"name":"sensitive to rotenone during mitotic cell cycle","type":"related"},{"name":"sensitive to rotenone during vegetative growth","type":"exact"}],"termid":"FYPO:0003894"}


id: PBO:0070684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 55","termid":"PBO:0070684"}


id: PBO:0041839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 19","termid":"PBO:0041839"}


id: PBO:0053928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1227","termid":"PBO:0053928"}


id: PBO:0053333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 173","termid":"PBO:0053333"}


id: PBO:0001623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin","termid":"PBO:0001623"}


id: PBO:0088789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rheb GAP, hamartin Tsc1","termid":"PBO:0088789"}


id: FYPO:0001033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000298","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal double-strand break repair","synonyms":[{"name":"normal double-strand break repair during mitotic cell cycle","type":"related"},{"name":"normal double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0001033"}


id: PBO:0078593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 6, Y-linked","termid":"PBO:0078593"}


id: GO:1903197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","PMID:16731528","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"regulation of L-dopa biosynthetic process","termid":"GO:1903195"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of L-dopa biosynthetic process","synonyms":[{"name":"activation of L-dopa anabolism","type":"narrow"},{"name":"activation of L-dopa biosynthesis","type":"narrow"},{"name":"activation of L-dopa biosynthetic process","type":"narrow"},{"name":"activation of L-dopa formation","type":"narrow"},{"name":"activation of L-dopa synthesis","type":"narrow"},{"name":"positive regulation of L-dopa anabolism","type":"exact"},{"name":"positive regulation of L-dopa biosynthesis","type":"exact"},{"name":"positive regulation of L-dopa formation","type":"exact"},{"name":"positive regulation of L-dopa synthesis","type":"exact"},{"name":"up regulation of L-dopa anabolism","type":"exact"},{"name":"up regulation of L-dopa biosynthesis","type":"exact"},{"name":"up regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up regulation of L-dopa formation","type":"exact"},{"name":"up regulation of L-dopa synthesis","type":"exact"},{"name":"up-regulation of L-dopa anabolism","type":"exact"},{"name":"up-regulation of L-dopa biosynthesis","type":"exact"},{"name":"up-regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up-regulation of L-dopa formation","type":"exact"},{"name":"up-regulation of L-dopa synthesis","type":"exact"},{"name":"upregulation of L-dopa anabolism","type":"exact"},{"name":"upregulation of L-dopa biosynthesis","type":"exact"},{"name":"upregulation of L-dopa biosynthetic process","type":"exact"},{"name":"upregulation of L-dopa formation","type":"exact"},{"name":"upregulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903197"}


id: GO:0046394
data:
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id: FYPO:0004003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing begins later than normal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["GO:0031297","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"delayed onset of replication fork processing","synonyms":[{"name":"delayed onset of collapsed replication fork processing","type":"exact"},{"name":"delayed onset of recovery from replication fork arrest","type":"exact"},{"name":"delayed onset of recovery from replication fork stalling","type":"exact"},{"name":"delayed onset of replication fork processing during mitotic cell cycle","type":"related"},{"name":"delayed onset of replication fork processing during vegetative growth","type":"exact"},{"name":"delayed onset of replication fork restart","type":"related"},{"name":"delayed onset of replication restart","type":"related"},{"name":"delayed replication fork processing","type":"exact"}],"termid":"FYPO:0004003"}


id: GO:1902131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-lariciresinol.","definition_xrefs":["GOC:TermGenie","PMID:8910615","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(+)-lariciresinol metabolic process","termid":"GO:1902130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"(+)-lariciresinol catabolic process","synonyms":[{"name":"(+)-lariciresinol breakdown","type":"exact"},{"name":"(+)-lariciresinol catabolism","type":"exact"},{"name":"(+)-lariciresinol degradation","type":"exact"}],"termid":"GO:1902131"}


id: GO:0003326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic A cell and its capacity to differentiate into a pancreatic A cell. A pancreatic A cell is a cell in the pancreas that secretes glucagon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic A cell fate commitment","termid":"GO:0003326"}


id: FYPO:0003856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to FR901464. Cells stop growing (and may die) at a concentration of FR901464 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to FR901464","synonyms":[{"name":"hypersensitive to FR901464","type":"exact"},{"name":"sensitive to FR901464 during mitotic cell cycle","type":"related"},{"name":"sensitive to FR901464 during vegetative growth","type":"exact"}],"termid":"FYPO:0003856"}


id: PBO:0004357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor (predicted)","termid":"PBO:0004357"}


id: GO:0051958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of methotrexate, 4-amino-10-methylformic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Methotrexate is a folic acid analogue and a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"methotrexate transport","termid":"GO:0051958"}


id: GO:0061709
data:
  {"annotated_genes":["SJAG_03100","SJAG_01382","SJAG_01135","SJAG_00059","SJAG_04219","SJAG_04435","SJAG_04991","SJAG_05289","SJAG_04655","SJAG_02539","SJAG_03851","SJAG_04232","SJAG_03170","SJAG_00053","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72574,72918,78164,78359,86132,94934,95215,99037,99822,100253,103922,105973,110431,111774],"is_not":false,"summary":null,"term":"GO:0061709"},{"annotations":[85260],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"The selective autohagy process in which parts of the endoplasmic reticulum are loaded into autophagosomes, delivered to the vacuole, and degraded in response to changing cellular conditions.","definition_xrefs":["GOC:autophagy","GOC:dph","PMID:22481944","PMID:26040717","PMID:24060720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00059":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_02539":null,"SJAG_03100":null,"SJAG_03170":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04435":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04991":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"reticulophagy","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:1990766"],"synonyms":[{"name":"ER autophagy","type":"exact"},{"name":"ER degradation","type":"related"},{"name":"ER-phagy","type":"exact"},{"name":"autophagy of the ER","type":"exact"},{"name":"autophagy of the endoplasmic reticulum","type":"exact"},{"name":"endoplasmic reticulum autophagy","type":"exact"},{"name":"endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0061709","terms_by_termid":{"GO:0061709":null,"GO:0140501":null}}


id: PBO:0049041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR32 pseudogene 1","termid":"PBO:0049041"}


id: PBO:0108596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13A","termid":"PBO:0108596"}


id: PBO:0005878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA binding endonuclease (predicted)","termid":"PBO:0005878"}


id: GO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of T cells in the thymus.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central T cell tolerance induction","synonyms":[{"name":"central T lymphocyte tolerance induction","type":"exact"},{"name":"central T-cell tolerance induction","type":"exact"},{"name":"central T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002512"}


id: GO:0042788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribosome bound to mRNA that forms part of a polysome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome","termid":"GO:0005840"},{"relation_name":"part_of","term_name":"polysome","termid":"GO:0005844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"polysomal ribosome","synonyms":[{"name":"active ribosome","type":"broad"}],"termid":"GO:0042788"}


id: PBO:0054601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2005","termid":"PBO:0054601"}


id: PBO:0048717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 3","termid":"PBO:0048717"}


id: GO:1903514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from endoplasmic reticulum to cytosol.","definition_xrefs":["GO_REF:0000078","GOC:rl","GOC:TermGenie","PMID:16402920","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by endoplasmic reticulum","synonyms":[{"name":"calcium ion transport from endoplasmic reticulum to cytosol","type":"broad"}],"termid":"GO:1903514"}


id: PBO:0029902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing","termid":"PBO:0029902"}


id: PBO:0076683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 2","termid":"PBO:0076683"}


id: GO:0180022
data:
  {"annotated_genes":["SJAG_03189","SJAG_02096","SJAG_00898"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87535,98577,111280],"is_not":false,"summary":null,"term":"GO:0180022"}]},"cv_name":"cellular_component","definition":"A ribosome disassembly complex which dissociates stalled ribsome subunits as part of the ribosome quality control pathway. RQT complex is composed of a RNA helicase-family protein yeast Rqt2 (human ASCC3), a ubiquitin-binding protein yeast Rqt3, (human ASCC2), and Rqt4 (Human TRIP4).","definition_xrefs":["PMID:32099016","PMID:28757607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00898":null,"SJAG_02096":null,"SJAG_03189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RQC-trigger complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RQT complex","type":"exact"}],"termid":"GO:0180022","terms_by_termid":{"GO:0180022":null}}


id: FYPO:0006912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clomiphene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on clomiphene","synonyms":[{"name":"normal cell population growth in presence of clomiphene","type":"exact"},{"name":"normal cell population growth on clomiphene","type":"exact"},{"name":"normal cellular response to clomiphene","type":"related"},{"name":"normal vegetative cell population growth on clomiphene","type":"exact"}],"termid":"FYPO:0006912"}


id: GO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell of the myocardium from one site to another that will contribute to heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart jogging","termid":"GO:0003305"}


id: PBO:0079111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 2 pseudogene 1","termid":"PBO:0079111"}


id: PR:P0CT61
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L23-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.11","synonyms":[{"name":"Spom972h-rpl2302","type":"exact"}],"termid":"PR:P0CT61"}


id: FYPO:0002148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of abnormal morphology (i.e. size, shape, or structure) that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, abnormal morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, abnormal morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, abnormal morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, abnormal morphology","type":"exact"}],"termid":"FYPO:0002148"}


id: GO:0036374
data:
  {"annotated_genes":["SJAG_01612","SJAG_03316"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93928,94742],"is_not":false,"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathione + H2O = L-cysteinylglycine + L-glutamate.","definition_xrefs":["EC:3.4.19.13","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"},{"relation_name":"is_a","term_name":"threonine-type peptidase activity","termid":"GO:0070003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0003824","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"glutathione hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1222712","MetaCyc:RXN-12618","RHEA:28807","Reactome:R-HSA-9026916","Reactome:R-HSA-9035966","Reactome:R-HSA-9026907","Reactome:R-HSA-9026912","Reactome:R-HSA-8943279","Reactome:R-HSA-9026927","Reactome:R-HSA-266046","Reactome:R-HSA-5433072","Reactome:R-HSA-9753634","KEGG_REACTION:R00494","Reactome:R-HSA-5602984","Reactome:R-HSA-9026757"],"synonyms":[{"name":"gamma-glutamyltranspeptidase activity","type":"related"},{"name":"glutathionase activity","type":"related"}],"termid":"GO:0036374","terms_by_termid":{"GO:0036374":null}}


id: GO:0062098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["GOC:aruk","GOC:rph","PMID:27258785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed necrotic cell death","termid":"GO:0062098"}


id: PBO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.20","termid":"PBO:0001817"}


id: FYPO:0003772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of messenger RNA derived from transposon-encoded genes measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:10022921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal transposon gene mRNA level","synonyms":[{"name":"normal level of transposon gene mRNA","type":"exact"},{"name":"normal transposon gene RNA level","type":"exact"},{"name":"normal transposon gene mRNA accumulation","type":"related"},{"name":"normal transposon gene mRNA level during mitotic cell cycle","type":"related"},{"name":"normal transposon gene mRNA level during vegetative growth","type":"exact"},{"name":"normal transposon gene transcript level","type":"exact"}],"termid":"FYPO:0003772"}


id: PBO:0067846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 148","termid":"PBO:0067846"}


id: PBO:0081838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 773","termid":"PBO:0081838"}


id: PBO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSF2RB pseudogene 1","termid":"PBO:0043988"}


id: GO:0034654
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id: GO:0019564
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  {"annotated_genes":["SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84380],"is_not":false,"summary":null,"term":"GO:0019564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, in the presence of oxygen.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol catabolic process","termid":"GO:0019563"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"aerobic glycerol catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY0-381","GO:0019565"],"synonyms":[{"name":"aerobic glycerol breakdown","type":"exact"},{"name":"aerobic glycerol catabolism","type":"exact"},{"name":"aerobic glycerol degradation","type":"exact"},{"name":"aerobic glycerol fermentation","type":"related"}],"termid":"GO:0019564","terms_by_termid":{"GO:0019564":null}}


id: PBO:0045414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA4 pseudogene 3","termid":"PBO:0045414"}


id: GO:0080172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the cells in the petal epidermis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal epidermis patterning","termid":"GO:0080172"}


id: FYPO:0001895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more cytoplasmic mRNA processing bodies (P-bodies) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"P-bodies present in increased numbers","synonyms":[{"name":"P bodies present in increased numbers","type":"exact"},{"name":"P-bodies present in greater numbers","type":"exact"},{"name":"P-bodies present in increased numbers during mitotic cell cycle","type":"related"},{"name":"P-bodies present in increased numbers during vegetative growth","type":"exact"},{"name":"additional P-bodies present","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in increased numbers","type":"exact"},{"name":"enhanced P-body formation","type":"related"},{"name":"extra P-bodies","type":"exact"},{"name":"increased P-body number","type":"exact"}],"termid":"FYPO:0001895"}


id: GO:0006864
data:
  {"annotated_genes":["SJAG_00154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of a pyrimidine nucleotide, any compound consisting of a pyrimidine nucleoside esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pyrimidine nucleotide transport","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0006864","terms_by_termid":{"GO:1990519":null}}


id: PBO:0003891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 Cyt1 (predicted)","termid":"PBO:0003891"}


id: PBO:0029158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_level","termid":"PBO:0029158"}


id: PBO:0029236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_disassembly","termid":"PBO:0029236"}


id: PBO:0018110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght5","termid":"PBO:0018110"}


id: PR:O94370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.04 gene.","definition_xrefs":["UniProtKB:O94370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C1604.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.04","synonyms":[{"name":"Spom972h-SPBC1604.04","type":"exact"}],"termid":"PR:O94370"}


id: PBO:0039009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 4","termid":"PBO:0039009"}


id: GO:0045052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein insertion into the endoplasmic reticulum (ER) membrane in which proteins become anchored to the phospholipid bilayer by a covalently attached glycosylphosphatidylinositol (GPI) molecule.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete protein insertion into ER membrane by GPI attachment sequence (obsolete GO:0045052)","synonyms":[{"name":"GPI attachment sequence mediated protein insertion into ER membrane","type":"exact"},{"name":"protein insertion into ER membrane, GPI attachment sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by GPI attachment sequence","type":"exact"},{"name":"protein-ER insertion by GPI attachment sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by GPI attachment sequence","type":"exact"}],"termid":"GO:0045052"}


id: MOD:00911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-leucine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-leucine residue","synonyms":[{"name":"ModLeu","type":"exact"}],"termid":"MOD:00911"}


id: FYPO:0002463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved septated vegetative cell","termid":"FYPO:0002282"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002481"],"synonyms":[{"name":"inviable branched curved cell","type":"exact"},{"name":"inviable branched, curved cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved septated cell","type":"exact"},{"name":"inviable branched, curved vegetative cell","type":"exact"},{"name":"inviable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, curved septated cell","type":"exact"},{"name":"inviable branched, long, curved, septated cell","type":"exact"},{"name":"inviable curved branched cell","type":"exact"},{"name":"inviable curved branched elongated cell","type":"exact"},{"name":"inviable elongated branched curved cell","type":"exact"},{"name":"lethal; branched, curved, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002463"}


id: PBO:0080519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 5, pseudogene","termid":"PBO:0080519"}


id: GO:0072371
data:
  {"annotated_genes":["SJAG_00364","SJAG_01082","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102023,109737,111430],"is_not":false,"summary":null,"term":"GO:0072371"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2A-serine (position 121) + ATP = histone H2A-phosphoserine (position 121) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 121 of histone H2A.","definition_xrefs":["PMID:19965387","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2A kinase activity","termid":"GO:0140995"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0003674","GO:0016301","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H2AS121 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H2A-S121 kinase activity","type":"exact"},{"name":"histone kinase activity (H2A-S121 specific)","type":"exact"},{"name":"histone serine kinase activity (H2A-S121 specific)","type":"exact"},{"name":"histone-serine kinase activity (H2A-S121 specific)","type":"exact"}],"termid":"GO:0072371","terms_by_termid":{"GO:0072371":null}}


id: PBO:0071344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 2","termid":"PBO:0071344"}


id: PBO:0005552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup211","termid":"PBO:0005552"}


id: GO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with to a member of the Wnt-family of signaling molecules to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete frizzled-2 receptor activity (obsolete GO:0004929)","synonyms":[{"name":"frizzled-2 receptor activity","type":"exact"}],"termid":"GO:0004929"}


id: PBO:0055892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 10B","termid":"PBO:0055892"}


id: PBO:0074415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM15 antisense RNA 1","termid":"PBO:0074415"}


id: FYPO:0000537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein secretion during vegetative growth","synonyms":[{"name":"abolished protein secretion during mitotic cell cycle","type":"related"},{"name":"absent protein secretion during vegetative growth","type":"exact"},{"name":"protein secretion abolished during vegetative growth","type":"exact"},{"name":"protein secretion: absent","type":"related"}],"termid":"FYPO:0000537"}


id: PBO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin independence factor Cif1","termid":"PBO:0005156"}


id: PBO:0081550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 470","termid":"PBO:0081550"}


id: PBO:0061307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide FF receptor 1","termid":"PBO:0061307"}


id: PBO:0013785
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli MutY","termid":"PBO:0013785"}


id: PBO:0005149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3 phosphoglycerate dehydrogenase (predicted)","termid":"PBO:0005149"}


id: PBO:0063740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 5","termid":"PBO:0063740"}


id: GO:1901873
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:21209915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-translational protein modification","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"regulation of PTM","type":"exact"},{"name":"regulation of post-translational amino acid modification","type":"exact"},{"name":"regulation of post-translational modification","type":"exact"},{"name":"regulation of posttranslational amino acid modification","type":"exact"},{"name":"regulation of posttranslational modification","type":"exact"},{"name":"regulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901873","terms_by_termid":{"GO:0033234":null}}


id: GO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminylglycopeptide.","definition_xrefs":["EC:2.4.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3656230","Reactome:R-HSA-9035949","Reactome:R-HSA-975919","Reactome:R-HSA-2025723","MetaCyc:2.4.1.38-RXN","Reactome:R-HSA-1912352","Reactome:R-HSA-2046265","Reactome:R-HSA-4793956","Reactome:R-HSA-9035950","RHEA:22932","Reactome:R-HSA-2046298"],"synonyms":[{"name":"GalT activity","type":"related"},{"name":"UDP-galactose--glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-1,4-galactosyltransferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyl-transferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyltransferase activity","type":"related"},{"name":"glycoprotein beta-galactosyltransferase activity","type":"related"},{"name":"thyroid galactosyltransferase activity","type":"narrow"},{"name":"thyroid glycoprotein beta-galactosyltransferase","type":"narrow"},{"name":"uridine diphosphogalactose-glycoprotein galactosyltransferase activity","type":"related"}],"termid":"GO:0003831"}


id: PBO:0081490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385B","termid":"PBO:0081490"}


id: GO:0061005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in kidney development","termid":"GO:0061005"}


id: GO:0045131
data:
  {"annotated_genes":["SJAG_00249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65258],"is_not":false,"summary":null,"term":"GO:0045131"}]},"cv_name":"molecular_function","definition":"Binding to a pre-mRNA branch point sequence, located upstream of the 3' splice site.","definition_xrefs":["PMID:11691992","PMID:9722632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA binding","termid":"GO:0036002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"pre-mRNA branch point binding","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0045131","terms_by_termid":{"GO:0045131":null}}


id: GO:0018827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-chloro-2,2-bis(4-chlorophenyl)ethane = HCl + unsym-bis(4-chlorophenyl)ethene. 1-chloro-2,2-bis(4-chlorophenyl)ethane is also known as DDMS; unsym-bis(4-chlorophenyl)ethene is also known as DDNU.","definition_xrefs":["UM-BBD_reactionID:r0515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"1-chloro-2,2-bis(4-chlorophenyl)ethane dehydrochlorinase activity","secondary_identifiers":["EC:4.5.1.-"],"synonyms":[{"name":"DDMS dehydrochlorinase activity","type":"exact"}],"termid":"GO:0018827"}


id: GO:0052033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (obsolete GO:0052033)","synonyms":[{"name":"MAMP dependent activation of host innate immunity","type":"exact"},{"name":"MAMP dependent induction of host innate immunity","type":"exact"},{"name":"PAMP dependent activation of host innate immunity","type":"exact"},{"name":"PAMP dependent induction of host innate immunity","type":"exact"},{"name":"PTI","type":"related"},{"name":"general elicitor-dependent activation of host innate immunity","type":"exact"},{"name":"general elicitor-dependent induction of host innate immunity","type":"exact"},{"name":"pathogen-associated molecular pattern dependent activation by organism of host innate immunity","type":"exact"},{"name":"pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity","type":"exact"},{"name":"pattern-triggered immunity","type":"related"}],"termid":"GO:0052033"}


id: GO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of indole acetic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of indole acetic acid levels in host (obsolete GO:0044032)","synonyms":[{"name":"modulation by symbiont of IAA levels in host","type":"exact"},{"name":"modulation by symbiont of auxin levels in host","type":"broad"}],"termid":"GO:0044032"}


id: PBO:0017441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_expression_of","termid":"PBO:0017441"}


id: PBO:0036329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase, prune (predicted)","termid":"PBO:0036329"}


id: PBO:0068125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 432","termid":"PBO:0068125"}


id: PR:Q9Y7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo6 gene.","definition_xrefs":["UniProtKB:Q9Y7J1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.04","synonyms":[{"name":"Spom972h-spo6","type":"exact"}],"termid":"PR:Q9Y7J1"}


id: PBO:0041116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain specific homeobox","termid":"PBO:0041116"}


id: GO:0007308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis, deposition, and organization of the materials in a cell of an ovary; where the cell can then undergo meiosis and form an ovum. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:ems","GOC:dph","ISBN:0198506732","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte construction","secondary_identifiers":["GO:0048110"],"synonyms":[{"name":"oocyte arrangement","type":"exact"}],"termid":"GO:0007308"}


id: PBO:0060364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomesin 3","termid":"PBO:0060364"}


id: PBO:0076744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia translocation altered","termid":"PBO:0076744"}


id: _global:exemplar_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is exemplar of Y if X is the best evidence for Y.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_of","termid":"_global:exemplar_of"}


id: PBO:0072812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 8","termid":"PBO:0072812"}


id: PBO:0017931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2 (predicted)","termid":"PBO:0017931"}


id: PBO:0034202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_organization_of","termid":"PBO:0034202"}


id: GO:0044543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in zymogen activation in another organism (obsolete GO:0044543)","synonyms":[{"name":"envenomation resulting in zymogen activation in other organism","type":"exact"}],"termid":"GO:0044543"}


id: GO:0061694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A catalytic protein complex that is capable of alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity.","definition_xrefs":["PMID:22089136","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase complex","termid":"GO:0061694"}


id: PBO:0086969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p; small single-membrane span proteolipid; forms unique helix and positively charged cytoplasmic domain that is able to specifically segregate phosphatidylserines; PMP1 has a paralog, PMP2, that arose from the whole genome duplication","termid":"PBO:0086969"}


id: PATO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001096 absolute force value (obsolete PATO:0001096)","termid":"PATO:0001096"}


id: PR:O14364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rbd1 gene.","definition_xrefs":["UniProtKB:O14364","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13E7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.11","synonyms":[{"name":"Spom972h-rbd1","type":"exact"}],"termid":"PR:O14364"}


id: PBO:0066661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPK2 divergent transcript","termid":"PBO:0066661"}


id: GO:1904018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculature development.","definition_xrefs":["PMID:21472453","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"positively_regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculature development","synonyms":[{"name":"activation of vascular system development","type":"related"},{"name":"activation of vasculature development","type":"narrow"},{"name":"positive regulation of vascular system development","type":"related"},{"name":"up regulation of vascular system development","type":"related"},{"name":"up regulation of vasculature development","type":"exact"},{"name":"up-regulation of vascular system development","type":"related"},{"name":"up-regulation of vasculature development","type":"exact"},{"name":"upregulation of vascular system development","type":"related"},{"name":"upregulation of vasculature development","type":"exact"}],"termid":"GO:1904018"}


id: PATO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color that lacks any hues as parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black","termid":"PATO:0000317"}


id: GO:1990658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transferase complex which is capable of transferring nitrogenous groups from one component to another.","definition_xrefs":["GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"transnitrosylase complex","synonyms":[{"name":"transferase complex, transferring nitrogenous groups","type":"exact"}],"termid":"GO:1990658"}


id: PBO:0026800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteasome_core_complex_binding","termid":"PBO:0026800"}


id: FYPO:0001120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped cell","termid":"FYPO:0000020"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"pear-shaped vegetative cell","synonyms":[{"name":"cell morphology, pear shaped during vegetative growth","type":"exact"},{"name":"ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"pear-shaped cell during vegetative growth","type":"exact"},{"name":"pear-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001120"}


id: GO:0000049
data:
  {"annotated_genes":["SJAG_02099","SJAG_04285","SJAG_02637","SJAG_02615","SJAG_01248","SJAG_00886","SJAG_00579","SJAG_00169","SJAG_01302","SJAG_04409","SJAG_02661","SJAG_01877","SJAG_02352","SJAG_00325","SJAG_01704","SJAG_03461","SJAG_00195","SJAG_01797","SJAG_04175","SJAG_04856","SJAG_04700","SJAG_01074","SJAG_02977","SJAG_00358","SJAG_04680","SJAG_03584","SJAG_02288","SJAG_04756","SJAG_03626","SJAG_00488","SJAG_04762","SJAG_03932","SJAG_04582","SJAG_02263","SJAG_03071","SJAG_01314","SJAG_00466","SJAG_04181","SJAG_03629","SJAG_03545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70728,71814,72104,72113,72188,72869,73075,73363,75912,76432,77611,78025,78287,83545,89359,89892,90106,90333,91070,91684,92791,94042,95956,96963,97745,98353,99591,101193,101269,102657,105014,107427,107902,108128,111240,113046,113157,114062],"is_not":false,"summary":null,"term":"GO:0000049"},{"annotations":[100830,92810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990856"}]},"cv_name":"molecular_function","definition":"Binding to a transfer RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00195":null,"SJAG_00325":null,"SJAG_00358":null,"SJAG_00466":null,"SJAG_00488":null,"SJAG_00579":null,"SJAG_00886":null,"SJAG_01074":null,"SJAG_01248":null,"SJAG_01302":null,"SJAG_01314":null,"SJAG_01704":null,"SJAG_01797":null,"SJAG_01877":null,"SJAG_02099":null,"SJAG_02263":null,"SJAG_02288":null,"SJAG_02352":null,"SJAG_02615":null,"SJAG_02637":null,"SJAG_02661":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03461":null,"SJAG_03545":null,"SJAG_03584":null,"SJAG_03626":null,"SJAG_03629":null,"SJAG_03932":null,"SJAG_04175":null,"SJAG_04181":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04582":null,"SJAG_04680":null,"SJAG_04700":null,"SJAG_04756":null,"SJAG_04762":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"tRNA binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0000946"],"synonyms":[{"name":"base pairing with tRNA","type":"narrow"}],"termid":"GO:0000049","terms_by_termid":{"GO:0000049":null,"GO:1990856":null}}


id: PBO:0090119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk13","termid":"PBO:0090119"}


id: PBO:0084495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Sae3p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084495"}


id: PBO:0074678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 62","termid":"PBO:0074678"}


id: PBO:0038921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G3","termid":"PBO:0038921"}


id: PBO:0027855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027855"}


id: GO:0075214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in a symbiont spore during the process of its encystment. Encystment means to enter a state of essentially suspended animation in which the spore is protected by an outer coating and remains immobile and inactive until favorable conditions for growth occur again. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:kmv","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore encystment","synonyms":[{"name":"spore encystment on host","type":"related"}],"termid":"GO:0075214"}


id: PBO:0014580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit EtfB (predicted)","termid":"PBO:0014580"}


id: SO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An internal RNA loop where the extent of the loop on both stands is the same size.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_internal_loop","termid":"SO:0000020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetric_RNA_internal_loop","synonyms":[{"name":"A-minor RNA motif","type":"exact"}],"termid":"SO:0000025"}


id: PBO:0053895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1180","termid":"PBO:0053895"}


id: PBO:0042735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein M","termid":"PBO:0042735"}


id: PBO:0077341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 80","termid":"PBO:0077341"}


id: PBO:0060382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb like, SWIRM and MPN domains 1","termid":"PBO:0060382"}


id: PBO:0054723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2132","termid":"PBO:0054723"}


id: PBO:0078928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-4","termid":"PBO:0078928"}


id: FYPO:0005735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is increased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to kinetochore during vegetative growth","termid":"FYPO:0003003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to kinetochore during mitosis","synonyms":[{"name":"increased protein localisation to kinetochore during mitosis","type":"exact"},{"name":"increased protein localization to kinetochore during mitotic M phase","type":"related"},{"name":"increased protein localization to kinetochore during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005735"}


id: GO:0000481
data:
  {"annotated_genes":["SJAG_04433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77122],"is_not":false,"summary":null,"term":"GO:0000481"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"maturation of 5S rRNA","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0000481","terms_by_termid":{"GO:0000481":null}}


id: GO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a regulatory subunit of phosphatidylinositol 3-kinase. The regulatory subunit associates with the catalytic subunit to regulate both its activity and subcellular location.","definition_xrefs":["PMID:20505341","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase regulatory subunit binding","synonyms":[{"name":"PI3K regulatory subunit binding","type":"exact"},{"name":"p85 binding","type":"related"}],"termid":"GO:0036312"}


id: PBO:0041813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coactivator associated arginine methyltransferase 1 pseudogene 1","termid":"PBO:0041813"}


id: PBO:0035782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_activation_of_protein_kinase_activity_during_mitosis","termid":"PBO:0035782"}


id: PBO:0036399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfhydryl oxidase Erv2 (predicted)","termid":"PBO:0036399"}


id: GO:0140981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl-medium-chain fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy-medium-chain fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:75279","PMID:35934685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"medium-chain fatty acid omega-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-19719"],"termid":"GO:0140981"}


id: GO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose.","definition_xrefs":["EC:5.1.3.10","RHEA:21656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"CDP-abequose epimerase activity","secondary_identifiers":["KEGG_REACTION:R04266","MetaCyc:RXN-9160"],"synonyms":[{"name":"CDP-3,6-dideoxy-D-glucose 2-epimerase activity","type":"related"},{"name":"CDP-D-abequose 2-epimerase activity","type":"related"},{"name":"CDP-paratose 2-epimerase activity","type":"related"},{"name":"CDP-paratose epimerase activity","type":"related"},{"name":"CDP-tyvelose 2-epimerase activity","type":"related"},{"name":"cytidine diphosphate paratose-2-epimerase activity","type":"related"},{"name":"cytidine diphosphoabequose epimerase activity","type":"related"},{"name":"cytidine diphosphodideoxyglucose epimerase activity","type":"related"},{"name":"cytidine diphosphoparatose epimerase activity","type":"related"}],"termid":"GO:0047732"}


id: GO:0102256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: neoagarohexaose + H2O = 3,6-anhydro-alpha-L-galactopyranose + agaropentaose.","definition_xrefs":["EC:3.2.1.159","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"neoagarohexaose 1,3-alpha-3,6-anhydro-L-galactosidase activity","secondary_identifiers":["MetaCyc:RXN-12429"],"termid":"GO:0102256"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: PBO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 2 pseudogene","termid":"PBO:0061981"}


id: PR:000028947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin reduced form in Schizosaccharomyces pombe. The reduced Cys are Cys-30 and Cys-33 in UniProtKB:O14463.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trx1/Red+","pombase_gene_id":"SPAC7D4.07c","synonyms":[{"name":"Spom-TXN/Red+","type":"exact"},{"name":"trx1/Red+","type":"exact"}],"termid":"PR:000028947"}


id: GO:0010725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of primitive erythrocyte differentiation. Primitive erythrocyte differentiation occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"primitive erythrocyte differentiation","termid":"GO:0060319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of primitive erythrocyte differentiation","synonyms":[{"name":"regulation of primitive RBC differentiation","type":"exact"},{"name":"regulation of primitive erythropoeisis","type":"exact"},{"name":"regulation of primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010725"}


id: PBO:0090867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk14","termid":"PBO:0090867"}


id: GO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of peptidyl-glycine cholest-5-en-3-beta-ol ester at the carboxy-terminus of autolytically cleaved proteins.","definition_xrefs":["RESID:AA0309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-terminal protein lipidation","termid":"GO:0006501"},{"relation_name":"is_a","term_name":"cholesterol metabolic process","termid":"GO:0008203"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0042158"],"is_obsolete":false,"name":"peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine","synonyms":[{"name":"peptidyl-glycine cholesteryl ester anabolism from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester formation from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester synthesis from peptidyl-glycine","type":"exact"}],"termid":"GO:0019708"}


id: GO:1990871
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the assembly of the V-ATPase complex. In the budding yeast Saccharomyces cerevisiae, this complex consists of Vma12p and Vma22p.","definition_xrefs":["GOC:rb","PMID:9660861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Vma12-Vma22 assembly complex","termid":"GO:1990871"}


id: PBO:0089560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec66","termid":"PBO:0089560"}


id: PBO:0042559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 1","termid":"PBO:0042559"}


id: GO:0098746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fast, initial phase of calcium ion-induced neurotransmitter release, via exocytosis, into the synaptic cleft. This depends on low affinity calcium sensors and typically begins a fraction of a millisecond after Ca2+ influx, and decays rapidly (1-10ms) with a decay constant of around 5-10ms. The underlying molecular mechanisms of this process are distinct from those of the later, slow phase of release.","definition_xrefs":["GOC:PARL","PMID:7809151","PMID:7954835","GOC:dos","PMID:4405553","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"fast, calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"synchronous, calcium ion-dependent exocytosis of neurotransmitter","type":"exact"}],"termid":"GO:0098746"}


id: PBO:0058612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6744","termid":"PBO:0058612"}


id: PBO:0003477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation termination factor Rrf1","termid":"PBO:0003477"}


id: GO:0038157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cytokine granulocyte macrophage colony-stimulating factor (GM-CSF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. GM-CSF binds to a heterodimer receptor (CSF2R) consisting of an alpha ligand-binding subunit, and a common beta subunit that is shared with other cytokine receptors.","definition_xrefs":["PMID:17027509","GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"granulocyte-macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"CSF2 signaling pathway","type":"exact"},{"name":"GM-CSF receptor signaling pathway","type":"exact"},{"name":"GM-CSF signaling pathway","type":"exact"},{"name":"granulocyte-macrophage colony-stimulating factor receptor signaling pathway","type":"exact"},{"name":"granulocyte-macrophage colony-stimulating factor signalling pathway","type":"related"}],"termid":"GO:0038157"}


id: PBO:0089867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3","termid":"PBO:0089867"}


id: FYPO:0003038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is abnormal. RNA molecules may be more or less likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA stability","synonyms":[{"name":"altered RNA stability","type":"exact"}],"termid":"FYPO:0003038"}


id: GO:0015216
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612","SJAG_00760","SJAG_04325","SJAG_03334","SJAG_04328","SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[96864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[106196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[70711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[74904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[74902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"purine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0015216","terms_by_termid":{"GO:0001409":null,"GO:0005471":null,"GO:0008521":null,"GO:0015228":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: PBO:0088251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAD superfamily hydrolase, unknown role","termid":"PBO:0088251"}


id: GO:0140246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein at a synapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein catabolic process at synapse","termid":"GO:0140246"}


id: PBO:0070086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear variant sequence with SNRPE pseudogene sequence","termid":"PBO:0070086"}


id: PBO:0076297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNE1 antisense RNA 1","termid":"PBO:0076297"}


id: PBO:0034364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_peramorphosis_relationship_with","termid":"PBO:0034364"}


id: GO:0042783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism avoids the effects of the host organism's immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb","PMID:12439615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"evasion of host immune response","secondary_identifiers":["GO:0042782","GO:0020012","GO:0051805","GO:0051809","GO:0051810"],"synonyms":[{"name":"active evasion of host immune response","type":"related"},{"name":"active evasion of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion","type":"broad"},{"name":"evasion by virus of host immune response","type":"related"},{"name":"evasion or tolerance of host immune response","type":"broad"},{"name":"immune evasion","type":"exact"},{"name":"mitigation by virus of host immune response","type":"related"},{"name":"mitigation of host immune response","type":"related"},{"name":"mitigation of host immune response by virus","type":"related"},{"name":"passive evasion of host immune response","type":"related"},{"name":"passive evasion of immune response of other organism involved in symbiotic interaction","type":"related"},{"name":"passive immune evasion","type":"related"},{"name":"suppression by virus of host immune response","type":"related"}],"termid":"GO:0042783"}


id: SO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_C_cluster","synonyms":[{"name":"J C cluster","type":"exact"},{"name":"J-C-CLUSTER","type":"exact"}],"termid":"SO:0000511"}


id: PBO:0057144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR222/221 cluster host gene","termid":"PBO:0057144"}


id: GO:0075200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont haustorium neck formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of symbiont haustorium neck formation for entry into host (obsolete GO:0075200)","termid":"GO:0075200"}


id: PBO:0086454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YLR046C has a paralog, RTA1, that arose from the whole genome duplication","termid":"PBO:0086454"}


id: PBO:0048819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 3","termid":"PBO:0048819"}


id: PBO:0031362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_K-252a","termid":"PBO:0031362"}


id: PBO:0086956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of ornithine decarboxylase Spe1p; antizyme that binds to Spe1p to stimulate ubiquitin-independent degradation by the proteasome; binding of polyamines to nascent Oaz1p during translation stimulates +1 ribosomal frameshifting, allowing translation of full-length Oaz1p","termid":"PBO:0086956"}


id: GO:0004345
data:
  {"annotated_genes":["SJAG_02148","SJAG_02696","SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92476,92565,113542],"is_not":false,"summary":null,"term":"GO:0004345"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+.","definition_xrefs":["EC:1.1.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02148":null,"SJAG_02297":null,"SJAG_02696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucose-6-phosphate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:15841","Reactome:R-HSA-70377","MetaCyc:GLU6PDEHYDROG-RXN"],"synonyms":[{"name":"6-phosphoglucose dehydrogenas","type":"related"},{"name":"6-phosphoglucose dehydrogenase activity","type":"exact"},{"name":"D-glucose 6-phosphate dehydrogenase activity","type":"exact"},{"name":"D-glucose-6-phosphate:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"Entner-doudoroff enzyme","type":"related"},{"name":"G6PD activity","type":"related"},{"name":"G6PDH","type":"exact"},{"name":"GDH","type":"related"},{"name":"NADP-dependent glucose 6-phosphate dehydrogenase activity","type":"exact"},{"name":"NADP-glucose-6-phosphate dehydrogenase activity","type":"exact"},{"name":"Zwischenferment","type":"related"},{"name":"glucose 6-phosphate dehydrogenase (NADP) activity","type":"exact"},{"name":"glucose-6-phosphate 1-dehydrogenase activity","type":"exact"}],"termid":"GO:0004345","terms_by_termid":{"GO:0004345":null}}


id: PBO:0045334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 9","termid":"PBO:0045334"}


id: GO:0044270
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id: PBO:0043685
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 pseudogene 1","termid":"PBO:0043685"}


id: GO:0070081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing monoamines.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle","type":"exact"}],"termid":"GO:0070081"}


id: PBO:0078350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 16-1","termid":"PBO:0078350"}


id: GO:0033228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cysteine from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid export across plasma membrane","termid":"GO:0032973"},{"relation_name":"is_a","term_name":"cysteine transmembrane transport","termid":"GO:1903712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"cysteine export across plasma membrane","synonyms":[{"name":"cysteine export","type":"broad"}],"termid":"GO:0033228"}


id: GO:0015851
data:
  {"annotated_genes":["SJAG_00760","SJAG_03970","SJAG_02147","SJAG_04717","SJAG_03777","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77142],"is_not":false,"summary":null,"term":"GO:0015851"},{"annotations":[107808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[107809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[110362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[83883],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[84216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904082"},{"annotations":[91139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"},{"annotations":[78557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_02147":null,"SJAG_03777":null,"SJAG_03970":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nucleobase transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"nucleobase transmembrane transport","type":"exact"}],"termid":"GO:0015851","terms_by_termid":{"GO:0015851":null,"GO:0042906":null,"GO:0098702":null,"GO:0098710":null,"GO:0098721":null,"GO:0140140":null,"GO:1904082":null,"GO:1905530":null}}


id: SO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a chromoplast, a colored plastid for synthesis and storage of pigments.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_sequence","synonyms":[{"name":"chromoplast sequence","type":"exact"}],"termid":"SO:0000744"}


id: GO:0051438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin transferase activity.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC regulator","type":"narrow"},{"name":"SCF complex regulator","type":"narrow"},{"name":"anaphase-promoting complex regulator","type":"narrow"},{"name":"regulation of ubiquitin transferase activity","type":"exact"},{"name":"ubiquitin transferase regulator","type":"related"},{"name":"ubiquitin-protein transferase regulator","type":"related"}],"termid":"GO:0051438"}


id: PR:O74184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of rapamycin complex subunit LST8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02946","PANTHER:PTHR19842:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein wat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.05c","secondary_identifiers":["UniProtKB:O74184"],"synonyms":[{"name":"Spom972h-MLST8","type":"exact"},{"name":"WD repeat-containing protein pop3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74184"}


id: PBO:0083828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential t-SNARE that mediates fusion of vesicles with the late Golgi; forms a complex with Tlg2p and Vti1p; mediates fusion of endosome-derived vesicles with the late Golgi; binds the docking complex VFT (Vps fifty-three) through interaction with Vps51p","termid":"PBO:0083828"}


id: GO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the host cell mitochondrial envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host organelle outer membrane","termid":"GO:0039661"},{"relation_name":"is_a","term_name":"host cell mitochondrial membrane","termid":"GO:0044191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial outer membrane","termid":"GO:0044193"}


id: GO:0034903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: endosulfan ether + O2 + 2 H+ + 2 e- = endosulfan hydroxyether + H2O.","definition_xrefs":["UM-BBD_reactionID:r1413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"endosulfan ether monooxygenase activity","termid":"GO:0034903"}


id: GO:0047411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + 2-(acetamidomethylene)succinate = CO2 + NH3 + succinate semialdehyde + acetate.","definition_xrefs":["EC:3.5.1.29","MetaCyc:3.5.1.29-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"2-(acetamidomethylene)succinate hydrolase activity","secondary_identifiers":["RHEA:10432"],"synonyms":[{"name":"2-(acetamidomethylene)succinate amidohydrolase (deaminating, decarboxylating)","type":"related"},{"name":"alpha-(N-acetylaminomethylene)succinic acid hydrolase activity","type":"related"}],"termid":"GO:0047411"}


id: GO:0045986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"negatively_regulates","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle contraction","synonyms":[{"name":"down regulation of smooth muscle contraction","type":"exact"},{"name":"down-regulation of smooth muscle contraction","type":"exact"},{"name":"downregulation of smooth muscle contraction","type":"exact"},{"name":"inhibition of smooth muscle contraction","type":"narrow"},{"name":"smooth muscle relaxation","type":"related"}],"termid":"GO:0045986"}


id: PBO:0054161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1530","termid":"PBO:0054161"}


id: PBO:0079945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USO1 vesicle transport factor","termid":"PBO:0079945"}


id: MOD:01511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01511"}


id: SO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 18S_rRNA, which functions as the small subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA_gene","termid":"SO:0002362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_18S_gene","synonyms":[{"name":"18S rRNA gene","type":"exact"},{"name":"18S_rRNA_gene","type":"exact"}],"termid":"SO:0002236"}


id: PBO:0082746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; non-essential gene required for regulation of ribosomal protein genes and the cell wall/stress response; null mutants are osmosensitive; RSC30 has a paralog, RSC3, that arose from the whole genome duplication","termid":"PBO:0082746"}


id: GO:0097129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D2-CDK4 complex","termid":"GO:0097129"}


id: PBO:0079796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A3 pseudogene 7","termid":"PBO:0079796"}


id: GO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal hypha.","definition_xrefs":["PMID:15976451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"hyphal tip","termid":"GO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938","GO:0032991"],"is_obsolete":false,"name":"hyphal tip polarisome","termid":"GO:0031562"}


id: PBO:0031198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_interphase","termid":"PBO:0031198"}


id: PBO:0047774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box C1","termid":"PBO:0047774"}


id: PBO:0090928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase Erg12","termid":"PBO:0090928"}


id: PATO:0000811
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000811 visual value (obsolete PATO:0000811)","termid":"PATO:0000811"}


id: PBO:0067556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 708, pseudogene","termid":"PBO:0067556"}


id: GO:2000799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal stem cell differentiation","termid":"GO:2000741"},{"relation_name":"is_a","term_name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"},{"relation_name":"positively_regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amniotic stem cell differentiation","termid":"GO:2000799"}


id: PBO:0057445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 563","termid":"PBO:0057445"}


id: PBO:0066940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 242","termid":"PBO:0066940"}


id: PBO:0059817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 43","termid":"PBO:0059817"}


id: PBO:0027004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_meiotic_cell_cycle","termid":"PBO:0027004"}


id: PBO:0060470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAMPT antisense RNA 1","termid":"PBO:0060470"}


id: PBO:0030815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_aconitate_hydratase_activity","termid":"PBO:0030815"}


id: GO:1990963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the retina. The blood-retinal barrier is located at two levels, forming an outer barrier in the retinal pigment epithelium and an inner barrier in the endothelial membrane of the retinal vessels. Both these membranes have tight junctions of the 'nonleaky' type.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-retinal barrier","synonyms":[{"name":"establishment of BRB","type":"related"},{"name":"establishment of blood-retina barrier","type":"exact"}],"termid":"GO:1990963"}


id: FYPO:0005041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","GO:0071619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0005041"}


id: PBO:0083615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein intermediate chain, microtubule motor protein; required for intracellular transport and cell division; acts in cytoplasmic dynein pathway; forms complex with dynein light chain Dyn2p that promotes Dyn1p homodimerization and potentiates motor processivity; Dyn2p-Pac11p complex is also important for interaction of dynein motor complex with dynactin complex; forms cortical cytoplasmic microtubule capture site with Num1p; essential in the absence of CIN8","termid":"PBO:0083615"}


id: FYPO:0003607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle","termid":"FYPO:0000120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000120","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle morphology","synonyms":[{"name":"spindle morphology: abnormal","type":"related"}],"termid":"FYPO:0003607"}


id: FYPO:0005338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005338"}


id: GO:0047994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA + H2O = 3-hydroxy-3-methylglutarate + CoA + H+.","definition_xrefs":["RHEA:16305","EC:3.1.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:HYDROXYMETHYLGLUTARYL-COA-HYDROLASE-RXN","KEGG_REACTION:R02083"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA hydrolase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA hydrolase activity","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl coenzyme A deacylase activity","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl coenzyme A hydrolase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A deacylase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047994"}


id: PBO:0060519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 1","termid":"PBO:0060519"}


id: FYPO:0000457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein methylation during vegetative growth","termid":"FYPO:0006122"},{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone methylation during vegetative growth","synonyms":[{"name":"abnormal histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000457"}


id: SO:1000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The replacement of a single amino acid by another.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000093 sequence_variant_causing_amino_acid_substitution (obsolete SO:1000093)","synonyms":[{"name":"mutation causing amino acid substitution","type":"related"},{"name":"sequence variant causing amino acid substitution","type":"exact"}],"termid":"SO:1000093"}


id: GO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoin = 2 benzaldehyde.","definition_xrefs":["EC:4.1.2.38","RHEA:21460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"benzoin aldolase activity","secondary_identifiers":["MetaCyc:BENZOIN-ALDOLASE-RXN","KEGG_REACTION:R00027"],"synonyms":[{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2- activity","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase (benzaldehyde-forming)","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase activity","type":"related"},{"name":"benzaldehyde lyase activity","type":"related"},{"name":"diphenylethanone benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0047695"}


id: FYPO:0002807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing arsenate ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on arsenic","termid":"FYPO:0004368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on arsenate","synonyms":[{"name":"normal cell population growth in presence of arsenate","type":"exact"},{"name":"normal cell population growth on arsenate","type":"exact"},{"name":"normal cell population growth on arsenate ion","type":"exact"},{"name":"normal cellular response to arsenate","type":"related"},{"name":"normal growth on arsenate ions","type":"exact"},{"name":"normal vegetative cell population growth on arsenate","type":"exact"}],"termid":"FYPO:0002807"}


id: GO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.","definition_xrefs":["PMID:12925704","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane repair","termid":"GO:0001778"}


id: GO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in the anterior lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell migration","termid":"GO:0048896"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration in anterior lateral line nerve","termid":"GO:0048912"}


id: GO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a growth cone, the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:tb","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth cone part (obsolete GO:0090723)","termid":"GO:0090723"}


id: PBO:0045477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drosha ribonuclease III","termid":"PBO:0045477"}


id: GO:0060901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate, frequency or extent of the hair cycle.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair cycle","termid":"GO:0042634"},{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of hair cycle by canonical Wnt signaling pathway","synonyms":[{"name":"regulation of hair cycle by Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0060901"}


id: PBO:0071241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 82","termid":"PBO:0071241"}


id: GO:0044874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a lipoprotein is transported to, or maintained in, a specific location in an outer membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein localization to membrane","termid":"GO:0044873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipoprotein localization to outer membrane","termid":"GO:0044874"}


id: GO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18836040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host response to induction by symbiont of tumor, nodule or growth in host","termid":"GO:0080034"}


id: GO:0000466
data:
  {"annotated_genes":["SJAG_03745","SJAG_04369","SJAG_03425","SJAG_04174","SJAG_00722","SJAG_04916","SJAG_04582","SJAG_02250","SJAG_06613","SJAG_02830","SJAG_02553","SJAG_01623","SJAG_00955","SJAG_01521","SJAG_04524","SJAG_03234","SJAG_01191","SJAG_00854","SJAG_02993","SJAG_04492","SJAG_00897","SJAG_02547","SJAG_00882","SJAG_04818","SJAG_04084","SJAG_02374","SJAG_04824","SJAG_04321","SJAG_04289","SJAG_03789","SJAG_03952","SJAG_01818","SJAG_01551","SJAG_00772","SJAG_04153","SJAG_00081","SJAG_03796","SJAG_02275","SJAG_00965","SJAG_04006","SJAG_01581","SJAG_03179"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77293,77559,93543,101411,106112],"is_not":false,"summary":null,"term":"GO:0000466"},{"annotations":[71484,90565,87364,99567],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[70604,104353,98574,110586,101066,100201,108733,110506,74108,99991,101067,113684,71932,90328,72791,71284,92084,92375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[97554,110633,92821,102830,101861,85708,70889,111070,71512,74512,94488,71803,103847,72369,76529],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[102831],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02830":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0000466","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: GO:0004583
data:
  {"annotated_genes":["SJAG_03764"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93953],"is_not":false,"summary":null,"term":"GO:0004583"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from dolichyl-phosphate D-glucose into a membrane lipid-linked oligosaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03764":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-5472","Reactome:R-HSA-446202","Reactome:R-HSA-4724330","Reactome:R-HSA-4724291","Reactome:R-HSA-446189","Reactome:R-HSA-446194"],"termid":"GO:0004583","terms_by_termid":{"GO:0004583":null}}


id: GO:0006791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary sulfur sources and then activates genes to scavenge the last traces of the primary sulfur source and to transport and metabolize alternate sulfur sources. The utilization process begins when the cell or organism detects sulfur levels, includes the activation of genes whose products detect, transport or metabolize sulfur-containing compounds, and ends when the sulfur is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mlg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfur utilization","synonyms":[{"name":"sulphur utilization","type":"exact"}],"termid":"GO:0006791"}


id: GO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host catalytic activity (obsolete GO:0052053)","synonyms":[{"name":"down regulation by symbiont of host enzyme activity","type":"exact"},{"name":"down-regulation by symbiont of host enzyme activity","type":"exact"},{"name":"downregulation by symbiont of host enzyme activity","type":"exact"},{"name":"inhibition by symbiont of host enzyme activity","type":"narrow"},{"name":"inhibition of host enzyme activity","type":"exact"},{"name":"negative regulation by symbiont of host enzyme activity","type":"exact"},{"name":"negative regulation by symbiont of host molecular function","type":"broad"}],"termid":"GO:0052053"}


id: PBO:0087558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Sea4p, along with Rtc1p and Mtc5p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; contains an N-terminal beta-propeller fold and a C-terminal RING motif","termid":"PBO:0087558"}


id: PBO:0069876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1163, pseudogene","termid":"PBO:0069876"}


id: FYPO:0003960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal diacylglycerol O-acyltransferase activity","termid":"FYPO:0003958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased diacylglycerol O-acyltransferase activity","synonyms":[{"name":"increased DGAT activity","type":"exact"},{"name":"increased diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003960"}


id: PBO:0083229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps YBR223C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083229"}


id: GO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the mesonephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron development","termid":"GO:0061215"}


id: PBO:0086579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant exhibits synthetic phenotype with alpha-synuclein","termid":"PBO:0086579"}


id: PBO:0046665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic stem cell related","termid":"PBO:0046665"}


id: GO:0032363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of FMN, riboflavin 5'-(dihydrogen phosphate), a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"FMN metabolic process","termid":"GO:0046444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"FMN catabolic process","termid":"GO:0032363"}


id: GO:0030300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption.","definition_xrefs":["PMID:11099417","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"is_a","term_name":"regulation of intestinal lipid absorption","termid":"GO:1904729"},{"relation_name":"regulates","term_name":"intestinal cholesterol absorption","termid":"GO:0030299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal cholesterol absorption","termid":"GO:0030300"}


id: GO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Cleavage of substrates with Phe and Leu in P2.","definition_xrefs":["EC:3.4.22.41"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin F activity (obsolete GO:0016946)","synonyms":[{"name":"cathepsin F activity","type":"exact"}],"termid":"GO:0016946"}


id: FYPO:0004161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at polymerase II transcribed genes during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","type":"exact"}],"termid":"FYPO:0004161"}


id: GO:1901977
data:
  {"annotated_genes":["SJAG_00883","SJAG_02336","SJAG_02169","SJAG_02451","SJAG_03353","SJAG_03681","SJAG_01679","SJAG_04259","SJAG_01297","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103613,111088,107238,109504,86433,102618,109030,99348,95103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[89827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:23028116","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001048"],"synonyms":[{"name":"down regulation of cell cycle checkpoint","type":"exact"},{"name":"down-regulation of cell cycle checkpoint","type":"exact"},{"name":"downregulation of cell cycle checkpoint","type":"exact"},{"name":"inhibition of cell cycle checkpoint","type":"narrow"},{"name":"negative regulation of G1/S checkpoint","type":"related"},{"name":"negative regulation of G1/S transition checkpoint","type":"related"}],"termid":"GO:1901977","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: PBO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-6, pseudogene","termid":"PBO:0052914"}


id: PBO:0003050
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by CCAAT complex","termid":"PBO:0003050"}


id: PBO:0050472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A cluster","termid":"PBO:0050472"}


id: GO:0002725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"negatively_regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell cytokine production","synonyms":[{"name":"down regulation of T cell cytokine production","type":"exact"},{"name":"down-regulation of T cell cytokine production","type":"exact"},{"name":"downregulation of T cell cytokine production","type":"exact"},{"name":"inhibition of T cell cytokine production","type":"narrow"},{"name":"negative regulation of T lymphocyte cytokine production","type":"exact"},{"name":"negative regulation of T-cell cytokine production","type":"exact"},{"name":"negative regulation of T-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002725"}


id: GO:0141065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the clearance of maternal mRNA transcripts from the zygote as part of the maternal-to-zygote transition in gene expression.","definition_xrefs":["PMID:19204068","PMID:32558204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"part_of","term_name":"maternal-to-zygotic transition of gene expression","termid":"GO:0160021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0044248","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"maternal mRNA clearance","synonyms":[{"name":"maternal mRNA degradation","type":"exact"},{"name":"maternal transcript clearance","type":"exact"},{"name":"maternal transcript degradation","type":"exact"}],"termid":"GO:0141065"}


id: GO:0018500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-9R,10R-dihydrodiolphenanthrene + NAD+ = NADH + H+ + 9,10-dihydroxyphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trans-9R,10R-dihydrodiolphenanthrene dehydrogenase activity","termid":"GO:0018500"}


id: FYPO:0006211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates but dies before forming a germ tube or dividing. Such spores exit dormancy and undergo isotropic swelling but the spore wall does not rupture and no germ tube emerges.","definition_xrefs":["PMID:28572514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, before germ tube formation","synonyms":[{"name":"inviable following spore germination, before germ tube formation","type":"exact"},{"name":"inviable germinated spore, without germ tube formation","type":"exact"},{"name":"lethal after spore germination, before germ tube formation","type":"exact"}],"termid":"FYPO:0006211"}


id: PBO:0056485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 2","termid":"PBO:0056485"}


id: PBO:0053185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 9","termid":"PBO:0053185"}


id: GO:0099588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of postsynaptic cytosolic calcium concentration","termid":"GO:0099588"}


id: GO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"centrosome duplication","synonyms":[{"name":"centrosome replication","type":"exact"}],"termid":"GO:0051298"}


id: PBO:0061174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 4-1","termid":"PBO:0061174"}


id: GO:2001277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"negatively_regulates","term_name":"leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of leucine biosynthetic process","synonyms":[{"name":"negative regulation of leucine anabolism","type":"exact"},{"name":"negative regulation of leucine biosynthesis","type":"exact"},{"name":"negative regulation of leucine formation","type":"exact"},{"name":"negative regulation of leucine synthesis","type":"exact"}],"termid":"GO:2001277"}


id: PBO:0055671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase A, lysosomal acid type","termid":"PBO:0055671"}


id: PBO:0067158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 210, pseudogene","termid":"PBO:0067158"}


id: PBO:0079616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L1 (pseudogene)","termid":"PBO:0079616"}


id: PBO:0090700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF family protein, DUF, human 4F5S homolog, implicated in mRNA splicing","termid":"PBO:0090700"}


id: GO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostanoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"prostanoid receptor binding","synonyms":[{"name":"prostanoid receptor ligand","type":"narrow"}],"termid":"GO:0031862"}


id: GO:0070354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the zinc finger transcription factor GATA2, the LIM domain protein Lmo2 (RBTN2), the basic helix-loop-helix protein TAL1 and its binding partner TCF3. The complex is involved transcriptional regulation in hematopoiesis.","definition_xrefs":["PMID:7568177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GATA2-TAL1-TCF3-Lmo2 complex","termid":"GO:0070354"}


id: GO:0052122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in host environment (obsolete GO:0052122)","synonyms":[{"name":"negative aerotaxis in response to host environment","type":"exact"}],"termid":"GO:0052122"}


id: PR:P54069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha/beta hydrolase domain-containing protein 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02874","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bem46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.03","secondary_identifiers":["UniProtKB:P54069"],"synonyms":[{"name":"Spom972h-ABHD13","type":"exact"}],"termid":"PR:P54069"}


id: PBO:0062447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 111 pseudogene","termid":"PBO:0062447"}


id: GO:0007629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response to external or internal stimuli that results in the locomotory process of flight. Flight is the self-propelled movement of an organism through the air.","definition_xrefs":["GOC:jid","ISBN:0198606907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult locomotory behavior","termid":"GO:0008344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight behavior","synonyms":[{"name":"flight behaviour","type":"exact"}],"termid":"GO:0007629"}


id: PBO:0058166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4460","termid":"PBO:0058166"}


id: PBO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae COQ8","termid":"PBO:0004301"}


id: GO:0061700
data:
  {"annotated_genes":["SJAG_02424","SJAG_03907","SJAG_00209","SJAG_00561","SJAG_04496"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74851,83812,84098,85164,101967],"is_not":false,"summary":null,"term":"GO:0061700"}]},"cv_name":"cellular_component","definition":"A multiprotein subcomplex of the GATOR complex that regulates TORC1 signaling by interacting with the Rag GTPase. In human, this complex consists of WDR24, WDR59, MIOS, SEH1L, and SEC13. In S. cerevisiae, this complex is referred to as SEACAT and contains the Sea2p, Sea3p, Sea4p, Seh1p, Sec13p proteins.","definition_xrefs":["GOC:krc","PMID:23723238","PMID:25934700","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"Seh1-associated complex","termid":"GO:0035859"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00561":null,"SJAG_02424":null,"SJAG_03907":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GATOR2 complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"SEACAT complex","type":"exact"}],"termid":"GO:0061700","terms_by_termid":{"GO:0061700":null}}


id: FYPO:0003036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to ultraviolet light. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000294","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal transcription during cellular response to UV","synonyms":[{"name":"normal transcription during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003036"}


id: GO:0043994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 23) = CoA + histone H3 N6-acetyl-L-lysine (position 23).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0016746","GO:0034212","GO:0003824"],"is_obsolete":false,"name":"histone H3K23 acetyltransferase activity","synonyms":[{"name":"histone H3-K23 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K23 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K23 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K23 specific)","type":"exact"}],"termid":"GO:0043994"}


id: PBO:0005521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp54","termid":"PBO:0005521"}


id: GO:0002844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of immune response to tumor cell","termid":"GO:0002838"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to tumor cell","termid":"GO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to tumor cell","synonyms":[{"name":"down regulation of tolerance induction to tumor cell","type":"exact"},{"name":"down-regulation of tolerance induction to tumor cell","type":"exact"},{"name":"downregulation of tolerance induction to tumor cell","type":"exact"},{"name":"inhibition of tolerance induction to tumor cell","type":"narrow"},{"name":"negative regulation of tolerance induction to tumour cell","type":"exact"}],"termid":"GO:0002844"}


id: PBO:0048635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 4","termid":"PBO:0048635"}


id: PBO:0028632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pre-mRNA_level","termid":"PBO:0028632"}


id: PBO:0077197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM4SF1 antisense RNA 1","termid":"PBO:0077197"}


id: PBO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf3","termid":"PBO:0002673"}


id: PBO:0036150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0036150"}


id: SO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the long terminal repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_LTR_region","synonyms":[{"name":"U3 LTR region","type":"exact"},{"name":"U3 long terminal repeat region","type":"exact"}],"termid":"SO:0000424"}


id: PBO:0082038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-deoxyglucose-6-phosphate phosphatase; member of a family of low molecular weight phosphatases; confers 2-deoxyglucose resistance when overexpressed; DOG1 has a paralog, DOG2, that arose from a single-locus duplication; the last half of DOG1 and DOG2 are subject to gene conversions among S. cerevisiae, S. paradoxus, and S. mikatae","termid":"PBO:0082038"}


id: GO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000436"}


id: GO:2000646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"regulation of receptor catabolic process","termid":"GO:2000644"},{"relation_name":"positively_regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor catabolic process","synonyms":[{"name":"positive regulation of receptor breakdown","type":"exact"},{"name":"positive regulation of receptor catabolism","type":"exact"},{"name":"positive regulation of receptor degradation","type":"exact"}],"termid":"GO:2000646"}


id: PBO:0070685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 56","termid":"PBO:0070685"}


id: PR:O74351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine desulfurase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11601:SF13","OMA:SCHPO03272","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine desulfurase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.11c","secondary_identifiers":["UniProtKB:O74351"],"synonyms":[{"name":"Spom972h-NFS1","type":"exact"}],"termid":"PR:O74351"}


id: PBO:0049999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone cell cycle regulator","termid":"PBO:0049999"}


id: PBO:0055687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyl(octanoyl) transferase 2","termid":"PBO:0055687"}


id: MOD:00312
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-myristoyl-L-cysteine.","definition_xrefs":["PubMed:10026218","PubMed:10080938","RESID:AA0307","PubMed:8824274","Unimod:45#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-myristoylated residue","termid":"MOD:00655"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-myristoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(tetradecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"LIPID S-myristoyl cysteine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"S-(C14:1 aliphatic acyl)cysteine","type":"exact"},{"name":"S-myristoyl-L-cysteine","type":"exact"},{"name":"S-myristoylated L-cysteine","type":"exact"},{"name":"SMyrCys","type":"exact"},{"name":"tetradecanoate cysteine thioester","type":"exact"}],"termid":"MOD:00312"}


id: PBO:0029173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_peptide-glutamate-N-acetyltransferase_activity","termid":"PBO:0029173"}


id: GO:0102693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + kinetin = H+ + kinetin-7-N-glucoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:kinetin 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4731"],"termid":"GO:0102693"}


id: GO:0071678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a neuron in the olfactory bulb is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb axon guidance","synonyms":[{"name":"olfactory bulb axon pathfinding","type":"exact"}],"termid":"GO:0071678"}


id: MOD:00917
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-threonine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-threonine residue","synonyms":[{"name":"ModThr","type":"exact"}],"termid":"MOD:00917"}


id: PATO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000368 towards1 (obsolete PATO:0000368)","termid":"PATO:0000368"}


id: PBO:0047691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 3 ligand","termid":"PBO:0047691"}


id: FYPO:0002603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation does not occur at the mating type locus during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H2A phosphorylation at mating type locus during mitotic S phase","synonyms":[{"name":"abolished histone H2A phosphorylation at mating type locus during mitotic S phase during vegetative growth","type":"exact"},{"name":"abolished histone H2A phosphorylation at mating type region during mitotic S phase","type":"exact"},{"name":"histone H2A phosphorylation abolished at mating type locus during mitotic S phase","type":"exact"},{"name":"histone H2A phosphorylation absent at mating type locus during mitotic S phase","type":"exact"}],"termid":"FYPO:0002603"}


id: PBO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methyl_methanesulfonate","termid":"PBO:0031341"}


id: GO:0072444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic DNA replication checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to DNA replication checkpoint signaling","termid":"GO:0072438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic DNA replication checkpoint signaling","secondary_identifiers":["GO:0072447"],"synonyms":[{"name":"S-M checkpoint effector process","type":"exact"},{"name":"mitotic DNA replication checkpoint effector process","type":"exact"},{"name":"response to S-M checkpoint signaling","type":"exact"},{"name":"response to signal involved in S-M checkpoint","type":"exact"},{"name":"response to signal involved in mitotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0072444"}


id: PBO:0071711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 9","termid":"PBO:0071711"}


id: GO:0097394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of telomeric repeat-containing RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["PMID:22139915","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete telomeric repeat-containing RNA transcription by RNA polymerase II (obsolete GO:0097394)","synonyms":[{"name":"TERRA RNA transcription from RNA pol II promoter","type":"related"},{"name":"telomeric RNA transcription from Pol II promoter","type":"related"},{"name":"telomeric repeat-containing RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:0097394"}


id: GO:1900015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytokine production involved in inflammatory response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"cytokine production involved in inflammatory response","termid":"GO:0002534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine production involved in inflammatory response","synonyms":[{"name":"regulation of cytokine production involved in acute inflammatory response","type":"narrow"}],"termid":"GO:1900015"}


id: PBO:0042893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1B","termid":"PBO:0042893"}


id: PBO:0072602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase related","termid":"PBO:0072602"}


id: PBO:0005021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threo-3-hydroxyaspartate ammonia-lyase (predicted)","termid":"PBO:0005021"}


id: FYPO:0007844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the monomethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:17363370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 monomethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 monomethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 monomethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 monomethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007844"}


id: PBO:0028438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_filipin","termid":"PBO:0028438"}


id: PBO:0030119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030119"}


id: GO:0032809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a neuron cell body - excludes the plasma membrane of cell projections such as axons and dendrites.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body membrane","termid":"GO:0044298"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"neuronal cell body membrane","synonyms":[{"name":"neuron cell body membrane","type":"exact"},{"name":"neuronal cell soma membrane","type":"exact"}],"termid":"GO:0032809"}


id: PBO:0074940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 105","termid":"PBO:0074940"}


id: GO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of biomineral tissue development, the formation of hard tissues that consist mainly of inorganic compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"positively_regulates","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of biomineral tissue development","termid":"GO:0070169"}


id: GO:0097021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.","definition_xrefs":["GOC:BHF","GOC:pr","PMID:18379575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration into lymphoid organs","synonyms":[{"name":"lymphocyte homing","type":"narrow"}],"termid":"GO:0097021"}


id: PR:O13764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome assembly factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23077:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ATPase pex6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.01","secondary_identifiers":["UniProtKB:O13764"],"synonyms":[{"name":"SPAC17A5.01","type":"related"},{"name":"Spom972h-PEX6","type":"exact"},{"name":"peroxin-6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome biosynthesis protein pex6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13764"}


