# terms

id: SO:1000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that alters the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000081 sequence_variant_affecting_rate_of_transcription (obsolete SO:1000081)","synonyms":[{"name":"mutation affecting rate of transcription","type":"related"},{"name":"sequence variant affecting rate of transcription","type":"exact"}],"termid":"SO:1000081"}


id: GO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the diameter of a blood vessel is changed due to activity of the renin-angiotensin system.","definition_xrefs":["GOC:tb","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal control of peripheral vascular resistance involved in regulation of systemic arterial blood pressure","termid":"GO:0003072"},{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"},{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of blood vessel diameter homeostasis by renin-angiotensin","synonyms":[{"name":"regulation of blood vessel diameter by renin-angiotensin","type":"exact"},{"name":"regulation of blood vessel size by renin-angiotensin","type":"broad"},{"name":"renin-angiotensin regulation of blood vessel size","type":"broad"}],"termid":"GO:0002034"}


id: GO:0046106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"thymine biosynthetic process","synonyms":[{"name":"thymine anabolism","type":"exact"},{"name":"thymine biosynthesis","type":"exact"},{"name":"thymine formation","type":"exact"},{"name":"thymine synthesis","type":"exact"}],"termid":"GO:0046106"}


id: PBO:0083132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity kinase; autophosphorylation required for function; required for spindle pole body (SPB) duplication and spindle checkpoint function; contributes to bi-orientation by promoting formation of force-generating kinetochore-microtubule attachments in meiosis I; substrates include SPB proteins Spc42p, Spc110p, and Spc98p, mitotic exit network protein Mob1p, kinetochore protein Cnn1p, and checkpoint protein Mad1p; substrate of APCC(Cdh1); similar to human Mps1p","termid":"PBO:0083132"}


id: PBO:0074892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 67","termid":"PBO:0074892"}


id: PBO:0018121
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vam7-like protein","termid":"PBO:0018121"}


id: FYPO:0004087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which astral microtubules are present in a greater than normal proportion of the cells that have mitotic spindles.","definition_xrefs":["PMID:11694582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased number of cells with astral spindle microtubules","synonyms":[{"name":"increased fraction of cells with spindles with astral microtubules","type":"exact"},{"name":"increased fraction of spindles with astral microtubules","type":"exact"},{"name":"increased number of cells with spindles with astral microtubules","type":"exact"},{"name":"increased number of spindles with astral microtubules","type":"exact"}],"termid":"FYPO:0004087"}


id: PBO:0082102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-ATPase involved in multivesicular body (MVB) protein sorting; ATP-bound Vps4p localizes to endosomes and catalyzes ESCRT-III disassembly and membrane release; ATPase activity is activated by Vta1p; regulates cellular sterol metabolism","termid":"PBO:0082102"}


id: SO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_gene","synonyms":[{"name":"rDNA","type":"exact"},{"name":"rRNA gene","type":"exact"}],"termid":"SO:0001637"}


id: PBO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M17","termid":"PBO:0000475"}


id: FYPO:0006562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G2 phase of the mitotic cell cycle is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during mitotic G2 phase","synonyms":[{"name":"increased mRNA level during mitotic G2 phase","type":"narrow"},{"name":"increased transcript level during mitotic G2 phase","type":"exact"},{"name":"increased RNA accumulation during mitotic G2 phase","type":"related"},{"name":"increased RNA level during G2 phase of mitotic cell cycle","type":"exact"},{"name":"increased RNA level during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006562"}


id: GO:0051280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of sequestering of calcium ion","termid":"GO:0051284"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"negatively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"down regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"down-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"downregulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"inhibition of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"negative regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"negative regulation of calcium mobilization","type":"broad"},{"name":"negative regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051280"}


id: GO:0021680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"}


id: PBO:0051850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRX4 antisense RNA 1","termid":"PBO:0051850"}


id: GO:0071345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"},{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cytokine stimulus","termid":"GO:0071345"}


id: GO:0102050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-tyrosine + ATP(4-) = H+ + indole-3-acetyl-tyrosine + AMP(2-) + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetyl-tyrosine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10432"],"termid":"GO:0102050"}


id: PBO:0068924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 167, pseudogene","termid":"PBO:0068924"}


id: PBO:0029392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029392"}


id: PBO:0079585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D1","termid":"PBO:0079585"}


id: FYPO:0001999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased nucleoside diphosphate kinase activity","termid":"FYPO:0001999"}


id: PBO:0063991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 25","termid":"PBO:0063991"}


id: PR:Q10060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mso1 gene.","definition_xrefs":["UniProtKB:Q10060","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.05c","synonyms":[{"name":"Spom972h-mso1","type":"exact"}],"termid":"PR:Q10060"}


id: PBO:0071301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 24","termid":"PBO:0071301"}


id: PR:Q9C0X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RuvB-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11093:SF3","OMA:SCHPO02044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB-like helicase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.09","secondary_identifiers":["UniProtKB:Q9C0X6"],"synonyms":[{"name":"Spom972h-RUVBL1","type":"exact"}],"termid":"PR:Q9C0X6"}


id: PBO:0042212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin K","termid":"PBO:0042212"}


id: GO:0052721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of apurinic/apyrimidinic (AP) endodeoxyribonuclease activity, the hydrolysis of ester linkages immediately 5' to an AP (also called abasic) site within a deoxyribonucleic acid molecule by creating internal breaks, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.","definition_xrefs":["PMID:19401441"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of apurinic/apyrimidinic endodeoxyribonuclease activity (obsolete GO:0052721)","synonyms":[{"name":"regulation of AP endodeoxyribonuclease activity","type":"exact"},{"name":"regulation of abasic endodeoxyribonuclease activity","type":"exact"},{"name":"regulation of apurinic endodeoxyribonuclease activity","type":"narrow"},{"name":"regulation of apyrimidinic endodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:0052721"}


id: PBO:0038715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 10","termid":"PBO:0038715"}


id: GO:1901007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (S)-scoulerine.","definition_xrefs":["GOC:yaf","UniPathway:UPA00319","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-scoulerine metabolic process (obsolete GO:1901007)","synonyms":[{"name":"(S)-scoulerine metabolism","type":"exact"}],"termid":"GO:1901007"}


id: GO:0160006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process mediated by the Fc receptor for the purpose of delivery of antigen-bound immunoglobulin to an intracellular compartment where the antigen can be processed and loaded onto MHC molecules. This process selectively targets antigens for presentation by MHC class II or cross-presentation by MHC class I.","definition_xrefs":["PMID:9463401","PMID:28389502","PMID:9143687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"Fc receptor-mediated immune complex endocytosis","synonyms":[{"name":"Fc receptor-mediated immune complex internalization","type":"related"},{"name":"Ig-complexed antigen endocytosis via Fc receptor","type":"exact"},{"name":"antigen-antibody immune complex uptake via Fc receptor","type":"exact"}],"termid":"GO:0160006"}


id: PBO:0039912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 10 like","termid":"PBO:0039912"}


id: GO:0044854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft assembly","termid":"GO:0001765"},{"relation_name":"is_a","term_name":"plasma membrane raft organization","termid":"GO:0044857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane raft assembly","termid":"GO:0044854"}


id: GO:0045295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catenin complex gamma subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"gamma-catenin binding","synonyms":[{"name":"plakoglobin binding","type":"exact"}],"termid":"GO:0045295"}


id: GO:0032584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a growth cone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"growth cone membrane","termid":"GO:0032584"}


id: PBO:0039312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 6","termid":"PBO:0039312"}


id: PBO:0079007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 1-1","termid":"PBO:0079007"}


id: GO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of L-ascorbic acid from one side of an epithelium to the other.","definition_xrefs":["GOC:mah","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete transepithelial L-ascorbic acid transport (obsolete GO:0070904)","synonyms":[{"name":"transepithelial L-ascorbate transport","type":"exact"},{"name":"transepithelial vitamin C transport","type":"exact"}],"termid":"GO:0070904"}


id: FYPO:0005720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is normal (i.e. indistinguishable from wild type) during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PMID:17881496","PomBase:mah","GO:1990942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal mitotic metaphase chromosome recapture","synonyms":[{"name":"normal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"normal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"normal mitotic kinetochore retrieval","type":"exact"},{"name":"normal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"normal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005720"}


id: PBO:0090515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 and Swr1 complex YEATS family subunit Yaf9","termid":"PBO:0090515"}


id: GO:0070312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleotide-excision repair complex formed by the association of the heterodimeric endonuclease XPF/ERCC4-ERCC1 (Rad1p and Rad10p in S. cerevisiae) with the RAD52 protein.","definition_xrefs":["PMID:14734547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"RAD52-ERCC4-ERCC1 complex","termid":"GO:0070312"}


id: PBO:0046868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas apoptotic inhibitory molecule 2","termid":"PBO:0046868"}


id: GO:0019594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannitol metabolic process","synonyms":[{"name":"mannitol metabolism","type":"exact"}],"termid":"GO:0019594"}


id: PBO:0059648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 14","termid":"PBO:0059648"}


id: PATO:0000175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000175 behavioral function (obsolete PATO:0000175)","termid":"PATO:0000175"}


id: PBO:0017646
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and named Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1. The Dpb3 ortholog appears to be the recently identified SPCC16C4.22 date=20120829","termid":"PBO:0017646"}


id: PBO:0054115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1480","termid":"PBO:0054115"}


id: GO:0140776
data:
  {"annotated_genes":["SJAG_01530","SJAG_03345","SJAG_03025","SJAG_04187","SJAG_04566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140775"},{"annotations":[88185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003789"},{"annotations":[85022,99663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140545"},{"annotations":[92119,108035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex and promoting the dissociation of one or many subunits. This often happens by changing the conformation of the protein being bound, which decreases its affinity for the rest of the complex.","definition_xrefs":["PMID:23727094","PMID:29779865","PMID:34836783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_03025":null,"SJAG_03345":null,"SJAG_04187":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex destabilizing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140776","terms_by_termid":{"GO:0003789":null,"GO:0008568":null,"GO:0140545":null,"GO:0140775":null}}


id: GO:0009024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-tagatose 6-phosphate = ADP + D-tagatose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"tagatose-6-phosphate kinase activity","secondary_identifiers":["MetaCyc:TAGAKIN-RXN","RHEA:12420"],"synonyms":[{"name":"ATP:D-tagatose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"phosphotagatokinase activity","type":"related"}],"termid":"GO:0009024"}


id: PBO:0046155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 3","termid":"PBO:0046155"}


id: PBO:0057440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 557","termid":"PBO:0057440"}


id: GO:1901771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of daunorubicin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00054","PMID:7601857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"daunorubicin biosynthetic process","synonyms":[{"name":"daunorubicin anabolism","type":"exact"},{"name":"daunorubicin biosynthesis","type":"exact"},{"name":"daunorubicin formation","type":"exact"},{"name":"daunorubicin synthesis","type":"exact"}],"termid":"GO:1901771"}


id: PBO:0076777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis development related protein","termid":"PBO:0076777"}


id: GO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any prostaglandin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid metabolite production involved in inflammatory response","termid":"GO:0002538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostaglandin production involved in inflammatory response","synonyms":[{"name":"prostaglandin production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002539"}


id: FYPO:0007112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process in which depolymerization (i.e. removal of tubulin dimers) of microtubules occurs at a lower rate, or speed, as part of centromere clustering during meiotic prophase I.","definition_xrefs":["PMID:23770679","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"decreased microtubule depolymerisation involved in meitotic centromere clustering during meiotic prophase I","termid":"FYPO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"decreased microtubule depolymerisation speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule depolymerization speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerisation involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic chromosome clustering during meiotic prophase I","type":"related"},{"name":"decreased rate of microtubule depolymerization involved in meiotic kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"reduced rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007112"}


id: GO:1901426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a furfural stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to furfural","termid":"GO:1901426"}


id: PBO:0025472
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microcephaly-capillary malformation syndrome (MICCAP)","termid":"PBO:0025472"}


id: PBO:0053149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 5","termid":"PBO:0053149"}


id: GO:1902991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["GOC:rl","GO_REF:0000058","GOC:PARL","PMID:24499793","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"regulation of APP catabolic process","type":"exact"},{"name":"regulation of APP catabolism","type":"exact"},{"name":"regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902991"}


id: PBO:0043282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member F","termid":"PBO:0043282"}


id: PBO:0007715
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as pseudo","termid":"PBO:0007715"}


id: PBO:0066378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 5","termid":"PBO:0066378"}


id: GO:1902071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hypoxia-inducible factor-1alpha signaling pathway.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:0097411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"regulation of HIF1alpha pathway","type":"exact"},{"name":"regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:1902071"}


id: PBO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Rix7 (predicted)","termid":"PBO:0003827"}


id: GO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anesthetic stimulus. An anesthetic is a substance that causes loss of feeling, awareness, or sensation.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anesthetic","synonyms":[{"name":"response to anaesthetic","type":"exact"}],"termid":"GO:0072347"}


id: GO:1902401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in mitotic DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic DNA damage checkpoint (obsolete GO:1902401)","synonyms":[{"name":"perception of stimulus involved in mitotic DNA damage checkpoint","type":"related"},{"name":"stimulus detection involved in mitotic DNA damage checkpoint","type":"exact"},{"name":"stimulus sensing involved in mitotic DNA damage checkpoint","type":"related"}],"termid":"GO:1902401"}


id: PBO:0090565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2462 family protein, human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0090565"}


id: PBO:0054699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2108","termid":"PBO:0054699"}


id: GO:0016849
data:
  {"annotated_genes":["SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004016"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphorus-oxygen lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.6.-.-"],"termid":"GO:0016849","terms_by_termid":{"GO:0004016":null}}


id: FYPO:0001745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biotin import","termid":"FYPO:0001744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased biotin import","synonyms":[{"name":"increased biotin import across plasma membrane","type":"exact"},{"name":"increased biotin import during mitotic cell cycle","type":"related"},{"name":"increased biotin import during vegetative growth","type":"exact"},{"name":"increased biotin import into cell","type":"exact"},{"name":"increased biotin uptake","type":"exact"}],"termid":"FYPO:0001745"}


id: PBO:0059382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 7","termid":"PBO:0059382"}


id: PBO:0050146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 2","termid":"PBO:0050146"}


id: PBO:0063940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 1","termid":"PBO:0063940"}


id: PBO:0058292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4666b","termid":"PBO:0058292"}


id: GO:0021808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that results in the fluctuations in intracellular calcium that are responsible for the initiation of movement as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GOC:dgh","PMID:12626695","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic calcium signaling involved in initiation of cell movement in glial-mediated radial cell migration (obsolete GO:0021808)","synonyms":[{"name":"cytosolic calcium signalling involved in the initiation of cell movement in glial-mediated radial cell migration","type":"exact"}],"termid":"GO:0021808"}


id: PBO:0079174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 3","termid":"PBO:0079174"}


id: PBO:0072585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog B, pseudogene","termid":"PBO:0072585"}


id: PBO:0077779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-methyltransferase","termid":"PBO:0077779"}


id: PBO:0043471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 8","termid":"PBO:0043471"}


id: PBO:0056530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA-acyl carrier protein transacylase","termid":"PBO:0056530"}


id: PBO:0084351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of trehalose 6-phosphate synthase/phosphatase complex; Tps1p-Tps2p complex converts uridine-5'-diphosphoglucose and glucose 6-phosphate to trehalose; contributes to survival to acute lethal heat stress; mutant has aneuploidy tolerance; protein abundance increases in response to DNA replication stress; TSL1 has a paralog, TPS3, that arose from the whole genome duplication","termid":"PBO:0084351"}


id: GO:0003997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide.","definition_xrefs":["EC:1.3.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA oxidase activity","secondary_identifiers":["Reactome:R-HSA-192335","Reactome:R-HSA-193369","RHEA:38959","Reactome:R-HSA-390256","MetaCyc:RXN-11026","Reactome:R-HSA-2066787"],"synonyms":[{"name":"acyl coenzyme A oxidase activity","type":"related"},{"name":"acyl-CoA:oxygen 2-oxidoreductase activity","type":"related"},{"name":"fatty acyl-CoA oxidase activity","type":"related"},{"name":"fatty acyl-coenzyme A oxidase activity","type":"related"}],"termid":"GO:0003997"}


id: PBO:0054390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1786","termid":"PBO:0054390"}


id: PBO:0053463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 424","termid":"PBO:0053463"}


id: PATO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer that has mass near a gravitational body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Weight"],"direct_ancestors":[{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"weight","termid":"PATO:0000128"}


id: PBO:0054895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2309","termid":"PBO:0054895"}


id: FYPO:0004113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, small cell","synonyms":[{"name":"inviable after spore germination, undivided small cell","type":"exact"},{"name":"inviable following spore germination, without cell division, small cell","type":"exact"},{"name":"inviable germinated spore, without cell division, small cell","type":"exact"},{"name":"lethal after spore germination, without cell division, small cell","type":"exact"}],"termid":"FYPO:0004113"}


id: GO:0036006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:yaf","PMID:14687666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"cellular response to M-CSF stimulus","type":"exact"},{"name":"cellular response to macrophage colony-stimulating factor","type":"exact"}],"termid":"GO:0036006"}


id: GO:0070677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methylcytosine.","definition_xrefs":["GOC:mah","PMID:19400805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (cytosine) methyltransferase activity","termid":"GO:0016434"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"rRNA (cytosine-2'-O-)-methyltransferase activity","termid":"GO:0070677"}


id: PBO:0075798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18L1 subunit of BAF chromatin remodeling complex","termid":"PBO:0075798"}


id: PBO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 4","termid":"PBO:0050036"}


id: GO:0008138
data:
  {"annotated_genes":["SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004721","GO:0003824","GO:0140096","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"protein tyrosine/serine/threonine phosphatase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-5675373","Reactome:R-HSA-5675376","Reactome:R-HSA-9652816"],"synonyms":[{"name":"dual-specificity protein phosphatase","type":"broad"}],"termid":"GO:0008138","terms_by_termid":{"GO:0017017":null}}


id: PBO:0005288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, implicated in translation","termid":"PBO:0005288"}


id: PBO:0080954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBED9 antisense RNA 1","termid":"PBO:0080954"}


id: PBO:0052612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 4","termid":"PBO:0052612"}


id: GO:0099083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of synaptic transmittion by cell-cell signaling across the synaptic cleft from postsynapse to presynapse, mediated by a neuropeptide.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:19448629","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099083"}


id: PBO:0061564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' nucleotidase, ecto-like, pseudogene","termid":"PBO:0061564"}


id: FYPO:0004416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to phosphate starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to phosphate starvation","termid":"FYPO:0003195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to phosphate starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"decreased RNA level during cellular response to phosphate depletion","type":"exact"},{"name":"decreased RNA level during cellular response to phosphate deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during phosphate starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to phosphate starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to phosphate starvation","type":"exact"},{"name":"reduced RNA level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004416"}


id: GO:0015245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fatty acids from one side of a membrane to the other. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"},{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"fatty acid transmembrane transporter activity","secondary_identifiers":["GO:0015246","Reactome:R-HSA-5627891","Reactome:R-HSA-879585"],"synonyms":[{"name":"fatty acid transporter activity","type":"related"},{"name":"fatty acyl transporter activity","type":"exact"},{"name":"fatty-acyl group transporter activity","type":"broad"},{"name":"peroxisomal fatty acyl transporter","type":"narrow"}],"termid":"GO:0015245"}


id: FYPO:0007708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move from one cell tip to the other at a normal frequency and amplitude.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal dynamic protein localization to cell tip","synonyms":[{"name":"normal dynamic protein localization to cell end","type":"exact"},{"name":"normal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"normal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"normal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007708"}


id: PBO:0041015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 2","termid":"PBO:0041015"}


id: PBO:0044467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily Z member 2, pseudogene","termid":"PBO:0044467"}


id: PBO:0085315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylglycerol phospholipase C; regulates phosphatidylglycerol (PG) accumulation via a phospholipase C-type degradation mechanism; PG levels affect mitochondrial function; contains glycerophosphodiester phosphodiesterase motifs","termid":"PBO:0085315"}


id: PBO:0031827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_modification","termid":"PBO:0031827"}


id: PBO:0028203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028203"}


id: PBO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase (predicted)","termid":"PBO:0000141"}


id: PBO:0046229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 22","termid":"PBO:0046229"}


id: SO:1000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_to_purine_transversion","synonyms":[{"name":"pyrimidine to purine transversion","type":"exact"}],"termid":"SO:1000018"}


id: PBO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 69","termid":"PBO:0050366"}


id: PBO:0084142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity glucose transporter; member of the major facilitator superfamily, nearly identical to Hxt7p, expressed at high basal levels relative to other HXTs, repression of expression by high glucose requires SNF3; HXT6 has a paralog, HXT1, that arose from the whole genome duplication","termid":"PBO:0084142"}


id: GO:0070886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the calcineurin-NFAT signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcineurin-NFAT signaling cascade","termid":"GO:0070884"},{"relation_name":"is_a","term_name":"positive regulation of calcineurin-mediated signaling","termid":"GO:0106058"},{"relation_name":"positively_regulates","term_name":"calcineurin-NFAT signaling cascade","termid":"GO:0033173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcineurin-NFAT signaling cascade","secondary_identifiers":["GO:0051533"],"synonyms":[{"name":"activation of calcineurin-NFAT signaling cascade","type":"narrow"},{"name":"positive regulation of NFAT protein import into nucleus","type":"narrow"},{"name":"positive regulation of calcineurin-NFAT signaling pathway","type":"related"},{"name":"positive regulation of calcineurin-NFAT signalling cascade","type":"exact"},{"name":"stimulation of calcineurin-NFAT signaling cascade","type":"narrow"},{"name":"up regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"up-regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"upregulation of calcineurin-NFAT signaling cascade","type":"exact"}],"termid":"GO:0070886"}


id: GO:1904048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GOC:pad","GO_REF:0000058","PMID:22314364","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of spontaneous synaptic transmission","termid":"GO:0150003"},{"relation_name":"regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"regulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904048"}


id: GO:1990214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16840699","PMID:22233353"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host protein levels (obsolete GO:1990214)","termid":"GO:1990214"}


id: PBO:0085811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; essential for growth under anaerobic conditions; mutation causes decreased expression of ATP2, impaired respiration, defective sterol uptake, and altered levels/localization of ABC transporters Aus1p and Pdr11p","termid":"PBO:0085811"}


id: PBO:0040789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional apoptosis regulator","termid":"PBO:0040789"}


id: GO:0097580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining copper ions in an intracellular area such that they are separated from other components of a biological system.","definition_xrefs":["PMID:3099306","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of copper ion","termid":"GO:0097578"},{"relation_name":"part_of","term_name":"intracellular copper ion homeostasis","termid":"GO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intracellular sequestering of copper ion","synonyms":[{"name":"intracellular copper ion retention","type":"exact"},{"name":"intracellular copper ion sequestering","type":"exact"},{"name":"intracellular copper ion sequestration","type":"exact"},{"name":"intracellular copper ion storage","type":"exact"},{"name":"intracellular retention of copper ion","type":"exact"},{"name":"intracellular sequestration of copper ion","type":"exact"},{"name":"intracellular storage of copper ion","type":"exact"}],"termid":"GO:0097580"}


id: PBO:0078741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 2 homolog B","termid":"PBO:0078741"}


id: PBO:0030284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sulfide","termid":"PBO:0030284"}


id: GO:0050815
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72421,77140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated serine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphoserine residue binding","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"phosphoserine binding","type":"related"}],"termid":"GO:0050815","terms_by_termid":{"GO:1990269":null}}


id: PBO:0045537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase 1","termid":"PBO:0045537"}


id: PBO:0057308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-1","termid":"PBO:0057308"}


id: PBO:0048001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD3 antisense RNA 1","termid":"PBO:0048001"}


id: PBO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing","termid":"PBO:0002475"}


id: MOD:00101
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysine amide.","definition_xrefs":["PubMed:6579533","RESID:AA0092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine amide","synonyms":[{"name":"(2S)-2,6-diaminohexanamide","type":"exact"},{"name":"L-lysine amide","type":"exact"},{"name":"LysN","type":"exact"},{"name":"MOD_RES Lysine amide","type":"exact"},{"name":"amidated L-lysine","type":"exact"},{"name":"lysinamide","type":"exact"}],"termid":"MOD:00101"}


id: PBO:0073227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA","termid":"PBO:0073227"}


id: GO:0004035
data:
  {"annotated_genes":["SJAG_02853","SJAG_03108"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72085,99067],"is_not":false,"summary":null,"term":"GO:0004035"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["EC:3.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02853":null,"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"alkaline phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:ALKAPHOSPHA-RXN","Reactome:R-HSA-8878787"],"synonyms":[{"name":"alkaline phenyl phosphatase activity","type":"related"},{"name":"alkaline phosphohydrolase activity","type":"related"},{"name":"alkaline phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"}],"termid":"GO:0004035","terms_by_termid":{"GO:0004035":null}}


id: FYECO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3'5'-cyclic AMP was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["CHEBI:17489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3,5-cyclic AMP","termid":"FYECO:0000056"}


id: PBO:0083356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUM1/YDR150W; null mutation blocks anaerobic growth","termid":"PBO:0083356"}


id: PBO:0044403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 115, pseudogene","termid":"PBO:0044403"}


id: GO:0008449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate.","definition_xrefs":["EC:3.1.6.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-acetylglucosamine-6-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.14-RXN","Reactome:R-HSA-1638032","Reactome:R-HSA-2263495"],"synonyms":[{"name":"2-acetamido-2-deoxy-D-glucose 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetyl-D-glucosamine-6-sulfate 6-sulfohydrolase activity","type":"related"},{"name":"N-acetylglucosamine 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetylglucosamine-6-sulphatase activity","type":"exact"},{"name":"O,N-disulfate O-sulfohydrolase activity","type":"related"},{"name":"acetylglucosamine 6-sulfatase activity","type":"related"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"glucosamine-6-sulfatase activity","type":"related"}],"termid":"GO:0008449"}


id: FYPO:0002955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transition from G0 phase (quiescence) to G1 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal G0 to G1 transition","synonyms":[{"name":"abnormal exit from cell quiescence","type":"exact"}],"termid":"FYPO:0002955"}


id: PATO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a parent.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000059 parental quality (obsolete PATO:0000059)","synonyms":[{"name":"parental type","type":"exact"}],"termid":"PATO:0000059"}


id: PBO:0038785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylphosphatase 1","termid":"PBO:0038785"}


id: GO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of water.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water deprivation","termid":"GO:0009414"},{"relation_name":"is_a","term_name":"cellular response to extracellular stimulus","termid":"GO:0031668"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cellular response to water stimulus","termid":"GO:0071462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to water deprivation","synonyms":[{"name":"cellular response to drought","type":"exact"}],"termid":"GO:0042631"}


id: GO:0052851
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108052],"is_not":false,"summary":null,"term":"GO:0052851"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe3+-siderophore + NADP+ + H+ -> 2 Fe2+-siderophore + NADPH.","definition_xrefs":["RHEA:28795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-chelate reductase activity","termid":"GO:0000293"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ferric-chelate reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R09541","MetaCyc:RXN0-6555","EC:1.16.1.9"],"synonyms":[{"name":"ferric chelate reductase activity","type":"broad"},{"name":"ferric reductase, NADPH-dependent activity","type":"exact"},{"name":"iron chelate reductase activity","type":"broad"}],"termid":"GO:0052851","terms_by_termid":{"GO:0052851":null}}


id: PBO:0075017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-28","termid":"PBO:0075017"}


id: PBO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitously_expresses","termid":"PBO:0034129"}


id: GO:0019216
data:
  {"annotated_genes":["SJAG_02380","SJAG_01906","SJAG_01307","SJAG_02104","SJAG_04018","SJAG_04092","SJAG_01187","SJAG_03130","SJAG_02044","SJAG_03940"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113179],"is_not":false,"summary":null,"term":"GO:0019216"},{"annotations":[89519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[71069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[106656,110670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[105066,108000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[105181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[75080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[84340,101247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01307":null,"SJAG_01906":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03940":null,"SJAG_04018":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of lipid metabolism","type":"exact"}],"termid":"GO:0019216","terms_by_termid":{"GO:0010895":null,"GO:0019216":null,"GO:0032443":null,"GO:0045540":null,"GO:0045717":null,"GO:0070452":null,"GO:0071072":null,"GO:2001211":null}}


id: FYPO:0005478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to arsenic-containing substance","termid":"FYPO:0003477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"abolished protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to arsenite ion","type":"exact"}],"termid":"FYPO:0005478"}


id: GO:0051404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Arg-Xaa bonds.","definition_xrefs":["EC:3.4.22.8"],"gene_count":0,"genotype_count":0,"name":"obsolete clostripain activity (obsolete GO:0051404)","synonyms":[{"name":"Clostridium histolyticum proteinase B","type":"related"},{"name":"alpha-clostridipain","type":"related"},{"name":"clostridiopeptidase B activity","type":"exact"},{"name":"clostripain activity","type":"exact"}],"termid":"GO:0051404"}


id: PBO:0070708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 13","termid":"PBO:0070708"}


id: PBO:0083941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl cyclotransferase; cleaves the gamma-glutamyl bond of glutathione to yield 5-oxoproline and a Cys-Gly dipeptide; similar to mammalian pro-apoptotic protein ChaC1; expression of mouse ChaC1 in yeast increases apoptosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; periodically expressed during the metabolic cycle","termid":"PBO:0083941"}


id: PBO:0053116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 2","termid":"PBO:0053116"}


id: PBO:0048718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 1","termid":"PBO:0048718"}


id: PBO:0084352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Late endosomal protein involved in late endosome to vacuole transport; functional homolog of human obesity receptor gene-related protein (OB-RGRP)","termid":"PBO:0084352"}


id: GO:0042564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimer consisting of an alpha and a beta-subunit that imports proteins with an NLS into the nucleus through a nuclear pore.","definition_xrefs":["PMID:9323123","PMID:9323134","GOC:jl","Wikipedia:Importin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NLS-dependent protein nuclear import complex","termid":"GO:0042564"}


id: MOD:01842
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to S-(2-aminovinyl)-L-cysteine.","definition_xrefs":["PubMed:20805503","RESID:AA0548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(R,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-L-cysteine","type":"exact"}],"termid":"MOD:01842"}


id: GO:0140069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butyryl-CoA + histone = CoA + butyryl-histone.","definition_xrefs":["PMID:27105113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide butyryltransferase activity","termid":"GO:0140065"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"histone butyryltransferase activity","termid":"GO:0140069"}


id: PBO:0060788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit C2","termid":"PBO:0060788"}


id: GO:0046627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of insulin receptor signaling pathway","termid":"GO:0046626"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to insulin stimulus","termid":"GO:1900077"},{"relation_name":"negatively_regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of insulin receptor signaling pathway","synonyms":[{"name":"down regulation of insulin receptor signaling pathway","type":"exact"},{"name":"down-regulation of insulin receptor signaling pathway","type":"exact"},{"name":"downregulation of insulin receptor signaling pathway","type":"exact"},{"name":"inhibition of insulin receptor signaling pathway","type":"narrow"},{"name":"negative regulation of insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0046627"}


id: PR:O14333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylserine decarboxylase proenzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10067:SF0","PRO:DNx","OMA:SCHPO03068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.18","secondary_identifiers":["UniProtKB:O14333"],"synonyms":[{"name":"Spom972h-PISD","type":"exact"}],"termid":"PR:O14333"}


id: PBO:0078357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 3-1","termid":"PBO:0078357"}


id: PBO:0087595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; similar to S. pombe Tti1p; detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087595"}


id: PBO:0075317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1","termid":"PBO:0075317"}


id: PBO:0059191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRGPRF antisense RNA 1","termid":"PBO:0059191"}


id: FYPO:0000171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which late endosome to vacuole transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal late endosome to vacuole transport","synonyms":[{"name":"abnormal late endosome to vacuole protein transport","type":"narrow"},{"name":"abnormal late endosome to vacuole transport during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome to vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000171"}


id: GO:0036463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic cell death.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"TRAIL receptor activity","synonyms":[{"name":"tumor necrosis factor-related apoptosis-inducing ligand receptor","type":"exact"}],"termid":"GO:0036463"}


id: FYPO:0002274
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114594,114586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[114593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[114189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[114589,114585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[114640],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[114582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[114579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is abnormal. A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":7,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein metabolic process","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_04697","SJAG_00610","SJAG_01787","SJAG_04551","SJAG_02592"],"single_locus_genotype_uniquenames":["gms1delta","sty1delta","pck1delta","pck2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","nem2delta"],"synonyms":[{"name":"abnormal cellular protein metabolic process","type":"exact"},{"name":"abnormal protein metabolism","type":"exact"}],"termid":"FYPO:0002274","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0043174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIR1 pseudogene 1","termid":"PBO:0043174"}


id: GO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits via an internal ribosome entry segment (IRES) before an AUG codon is encountered in an appropriate sequence context to initiate linear mRNA translation.","definition_xrefs":["PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation of linear mRNA","termid":"GO:0110017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"IRES-dependent translational initiation of linear mRNA","termid":"GO:0002192"}


id: GO:1903807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-threonine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine transport","termid":"GO:0015826"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-threonine import across plasma membrane","secondary_identifiers":["GO:0036231"],"synonyms":[{"name":"L-threonine import","type":"broad"},{"name":"L-threonine import into cell","type":"exact"},{"name":"L-threonine uptake","type":"exact"}],"termid":"GO:1903807"}


id: PBO:0082405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the translation initiation factor eIF2; involved in the identification of the start codon; proposed to be involved in mRNA binding","termid":"PBO:0082405"}


id: PBO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034463"}


id: FYPO:0004647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to copper ion","synonyms":[{"name":"increased RNA accumulation during cellular response to copper ion","type":"related"},{"name":"increased RNA level during cellular response to copper","type":"exact"},{"name":"increased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"increased transcript level during cellular response to copper ion","type":"exact"}],"termid":"FYPO:0004647"}


id: PBO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34 (predicted)","termid":"PBO:0000966"}


id: PBO:0042855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 69","termid":"PBO:0042855"}


id: GO:0035208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) that are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of hemocyte proliferation","termid":"GO:0035206"},{"relation_name":"positively_regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemocyte proliferation","synonyms":[{"name":"activation of hemocyte proliferation","type":"narrow"},{"name":"positive regulation of arthropod blood cell proliferation","type":"exact"},{"name":"stimulation of hemocyte proliferation","type":"narrow"},{"name":"up regulation of hemocyte proliferation","type":"exact"},{"name":"up-regulation of hemocyte proliferation","type":"exact"},{"name":"upregulation of hemocyte proliferation","type":"exact"}],"termid":"GO:0035208"}


id: GO:0180019
data:
  {"annotated_genes":["SJAG_03327","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96832,109027],"is_not":false,"summary":null,"term":"GO:0180019"}]},"cv_name":"cellular_component","definition":"A kinetochore subcomplex that binds to centromeric chromatin and forms part of the outer kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans and yeast respectively, it consists of KNL1/Spc105p and ZWINT/Kre28p.","definition_xrefs":["PMID:27881301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991","GO:0000776"],"is_obsolete":false,"name":"Knl1/Spc105 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180019","terms_by_termid":{"GO:0180019":null}}


id: GO:0039525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus effects a change in the organization of chromatin in the host.","definition_xrefs":["PMID:11483770","PMID:16687403","GOC:bf","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host process","termid":"GO:0019048"},{"relation_name":"is_a","term_name":"modulation by symbiont of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"modulation by virus of host chromatin organization","synonyms":[{"name":"modulation by virus of host chromatin organisation","type":"exact"},{"name":"modulation of host chromatin by virus","type":"exact"},{"name":"modulation of host chromatin structure by virus","type":"exact"},{"name":"regulation by virus of host chromatin organization","type":"related"}],"termid":"GO:0039525"}


id: PBO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ctr4","termid":"PBO:0000340"}


id: PBO:0049505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 12","termid":"PBO:0049505"}


id: PBO:0016919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug15","termid":"PBO:0016919"}


id: PBO:0063671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3","termid":"PBO:0063671"}


id: PBO:0050755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 17","termid":"PBO:0050755"}


id: GO:0061665
data:
  {"annotated_genes":["SJAG_01776","SJAG_03175","SJAG_00727","SJAG_02299","SJAG_05012"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72386,72394,99805],"is_not":false,"summary":null,"term":"GO:0061665"},{"annotations":[87205,105295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140082"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of SUMO to a substrate protein via the reaction X-SUMO + S = X + S-SUMO, where X is either an E2 or E3 enzyme, the X-SUMO linkage is a thioester bond, and the S-SUMO linkage is an isopeptide bond between the C-terminal amino acid of SUMO and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO transferase activity","termid":"GO:0019789"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01776":null,"SJAG_02299":null,"SJAG_03175":null,"SJAG_05012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0140096","GO:0019787","GO:0003824"],"is_obsolete":false,"name":"SUMO ligase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-9834809"],"synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061665","terms_by_termid":{"GO:0061665":null,"GO:0140082":null}}


id: PR:P87146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03639","PANTHER:PTHR14110:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.04c","secondary_identifiers":["UniProtKB:P87146"],"synonyms":[{"name":"Spom972h-TIMM22","type":"exact"}],"termid":"PR:P87146"}


id: PBO:0084080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II; catalyzes the first step of the riboflavin biosynthesis pathway","termid":"PBO:0084080"}


id: GO:0061462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a lysosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to lysosome","termid":"GO:0061462"}


id: PBO:0041052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 3","termid":"PBO:0041052"}


id: PBO:0076128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine interacting like 2","termid":"PBO:0076128"}


id: PBO:0091346
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K/H ion Antiporter, after S. cerevisiae","termid":"PBO:0091346"}


id: PBO:0039320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activating protein","termid":"PBO:0039320"}


id: GO:0061767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that decreases the force with which blood travels through the lungs.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:bc","PMID:22161164","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lung blood pressure","termid":"GO:0014916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung blood pressure","synonyms":[{"name":"negative regulation of pulmonary blood pressure","type":"exact"}],"termid":"GO:0061767"}


id: GO:1902153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA integrity checkpoint signaling","termid":"GO:1902151"},{"relation_name":"regulates","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to DNA damage checkpoint signaling","synonyms":[{"name":"regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:1902153"}


id: PBO:0079017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruB pseudouridine synthase family member 2","termid":"PBO:0079017"}


id: GO:0102830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 stachyose = verbascose + raffinose.","definition_xrefs":["GOC:pz","PMID:12060258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"verbascose synthase activity","secondary_identifiers":["MetaCyc:RXN-8286"],"termid":"GO:0102830"}


id: PBO:0074312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 antisense RNA 1","termid":"PBO:0074312"}


id: PBO:0076877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX28 pseudogene 1","termid":"PBO:0076877"}


id: GO:1903486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any establishment of actomyosin contractile ring localization that is involved in mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of mitotic actomyosin contractile ring localization (obsolete GO:1903486)","termid":"GO:1903486"}


id: PBO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog (predicted)","termid":"PBO:0000488"}


id: PBO:0087373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein kinase (SRPK); involved in mRNA 3' splice site recognition with Prp8p and Cdc40p; phosphorylates one or more SR dipeptides on mRNA export factors Npl3p and Gbp2p to stimulate cytoplasmic release of mRNA and Mtr10p-mediated nuclear reimport; component of stress granules that regulates granule disassembly during recovery from stress; modulates cation uptake and homeostasis through membrane transporters; contains prion-like domains; similar to human SRPK1","termid":"PBO:0087373"}


id: PR:O42861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.01c","synonyms":[{"name":"Fun thirty-related protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft3","type":"exact"}],"termid":"PR:O42861"}


id: PBO:0026758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0026758"}


id: PBO:0078685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-1","termid":"PBO:0078685"}


id: GO:1901242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + doxorubicin(in) = ADP + phosphate + doxorubicin(out).","definition_xrefs":["PMID:15090538","GOC:TermGenie","PMID:12057006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type doxorubicin transporter activity","secondary_identifiers":["TC:3.A.1.105.1"],"synonyms":[{"name":"ATPase-coupled doxorubicin transmembrane transporter activity","type":"related"},{"name":"doxorubicin transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901242"}


id: GO:0042596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response of an organism to a perceived external threat.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear response","secondary_identifiers":["GO:0001663"],"synonyms":[{"name":"physiological fear response","type":"exact"}],"termid":"GO:0042596"}


id: SO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The RNA component of Ribonuclease P (RNase P), a ubiquitous endoribonuclease, found in archaea, bacteria and eukarya as well as chloroplasts and mitochondria. Its best characterized activity is the generation of mature 5 prime ends of tRNAs by cleaving the 5 prime leader elements of precursor-tRNAs. Cellular RNase Ps are ribonucleoproteins. RNA from bacterial RNase Ps retains its catalytic activity in the absence of the protein subunit, i.e. it is a ribozyme. Isolated eukaryotic and archaeal RNase P RNA has not been shown to retain its catalytic function, but is still essential for the catalytic activity of the holoenzyme. Although the archaeal and eukaryotic holoenzymes have a much greater protein content than the bacterial ones, the RNA cores from all the three lineages are homologous. Helices corresponding to P1, P2, P3, P4, and P10/11 are common to all cellular RNase P RNAs. Yet, there is considerable sequence variation, particularly among the eukaryotic RNAs.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_P_RNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:RNase_P_RNA","type":"exact"},{"name":"RNase P RNA","type":"exact"}],"termid":"SO:0000386"}


id: PBO:0067191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 253, pseudogene","termid":"PBO:0067191"}


id: GO:0030979
data:
  {"annotated_genes":["SJAG_00424","SJAG_00610","SJAG_02916","SJAG_03057","SJAG_04184","SJAG_04236","SJAG_01028","SJAG_04666","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72946,71604,73129,77608,70819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[98310,88071,90546,85188],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"alpha-glucan anabolism","type":"exact"},{"name":"alpha-glucan biosynthesis","type":"exact"},{"name":"alpha-glucan formation","type":"exact"},{"name":"alpha-glucan synthesis","type":"exact"}],"termid":"GO:0030979","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0039877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 33","termid":"PBO:0039877"}


id: GO:0051522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the inactive process of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monopolar cell growth","termid":"GO:0051515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of monopolar cell growth","termid":"GO:0051522"}


id: PBO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 1","termid":"PBO:0046962"}


id: GO:0018127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + L-serine = nicotinamide + N2-(ADP-D-ribosyl)-L-serine.","definition_xrefs":["EC:2.4.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"NAD(P)-serine ADP-ribosyltransferase activity","termid":"GO:0018127"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110769],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: GO:0048520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.","definition_xrefs":["GOC:jid","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of behavior","synonyms":[{"name":"activation of behavior","type":"narrow"},{"name":"stimulation of behavior","type":"narrow"},{"name":"up regulation of behavior","type":"exact"},{"name":"up-regulation of behavior","type":"exact"},{"name":"upregulation of behavior","type":"exact"}],"termid":"GO:0048520"}


id: PBO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control Swt1 (predicted)","termid":"PBO:0018152"}


id: SO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A flanking region located five prime of a specific region.","definition_xrefs":["SO:chado"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_flanking_region","synonyms":[{"name":"5' flanking region","type":"related"},{"name":"five prime flanking region","type":"exact"}],"termid":"SO:0001416"}


id: PBO:0084364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipase with specificity for monoacylglycerol; preferred substrate is 1-oleoylglycerol; null mutation affects lipid droplet morphology and overexpression causes increased accumulation of reactive oxygen species","termid":"PBO:0084364"}


id: GO:0035121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of the tail are generated and organized. The tail is the hindmost part of some animals.","definition_xrefs":["ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete tail morphogenesis (obsolete GO:0035121)","synonyms":[{"name":"tail morphogenesis","type":"exact"}],"termid":"GO:0035121"}


id: GO:0007534
data:
  {"annotated_genes":["SJAG_01601","SJAG_01419","SJAG_02724","SJAG_02556","SJAG_03221","SJAG_02828","SJAG_01495","SJAG_01677","SJAG_01076","SJAG_02079","SJAG_02226","SJAG_05239","SJAG_03097","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83729,84921,91767,93000,94668,96080,101476,102031,103871,105614,106122,110238,111973,113845],"is_not":false,"summary":null,"term":"GO:0007534"}]},"cv_name":"biological_process","definition":"The conversion of the mating-type locus from one allele to another resulting from the recombinational repair of a site-specific double-strand break at the mating-type locus with information from a silent donor sequence. There is no reciprocal exchange of information because the mating-type locus copies information from the donor sequence and the donor sequence remains unchanged.","definition_xrefs":["GOC:elh","PMID:7646483","PMID:10716938","PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic recombination","termid":"GO:0006312"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01076":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"gene conversion at mating-type locus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000734","GO:0000728","GO:0010708","GO:0031292","GO:0061500","GO:0034636"],"synonyms":[{"name":"gene conversion at mating-type locus, DNA double-strand break formation","type":"narrow"},{"name":"gene conversion at mating-type locus, DNA double-strand break processing","type":"narrow"},{"name":"gene conversion at mating-type locus, DNA repair synthesis","type":"narrow"},{"name":"gene conversion at mating-type locus, termination of copy-synthesis","type":"narrow"},{"name":"heteroduplex formation involved in gene conversion at mating-type locus","type":"narrow"},{"name":"strand invasion involved in gene conversion at mating-type locus","type":"exact"}],"termid":"GO:0007534","terms_by_termid":{"GO:0007534":null}}


id: PBO:0067994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 296","termid":"PBO:0067994"}


id: PBO:0087666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner nuclear membrane Asi ubiquitin ligase complex; the Asi complex targets both misfolded proteins of the inner nuclear membrane-associated degradation (INMAD) pathway and regulators of sterol biosynthesis for ubiquitin-mediated degradation; acts with Asi2p and Asi3p to ensure the fidelity of SPS-sensor signaling by targeting latent unprocessed forms of Stp1p and Stp2p, maintaining the repressed state of gene expression in the absence of inducing amino acids","termid":"PBO:0087666"}


id: PBO:0038820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 23","termid":"PBO:0038820"}


id: PBO:0040595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated agonist of cell death","termid":"PBO:0040595"}


id: GO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein (obsolete GO:0005187)","synonyms":[{"name":"storage protein","type":"exact"}],"termid":"GO:0005187"}


id: GO:0120056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Migration of ingested material along the length of the large intestine.","definition_xrefs":["PMID:28157109","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal motility","termid":"GO:0120054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"large intestinal transit","synonyms":[{"name":"colon transit","type":"exact"},{"name":"colonic transit","type":"exact"},{"name":"large bowel transit","type":"exact"},{"name":"large intestine transit","type":"exact"}],"termid":"GO:0120056"}


id: GO:1902171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tocopherol cyclase activity.","definition_xrefs":["GOC:TermGenie","PMID:23632854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tocopherol cyclase activity","termid":"GO:1902171"}


id: GO:0043293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit protein complex involved in the signaling phase of the apoptotic process. In mammals it is typically composed of seven Apaf-1 subunits bound to cytochrome c and caspase-9. A similar complex to promote apoptosis is formed from homologous gene products in other eukaryotic organisms.","definition_xrefs":["PMID:15189137","GOC:mtg_apoptosis","PMID:10428850","PMID:12176339","PMID:11406413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"apoptosome","secondary_identifiers":["Wikipedia:Apoptosome"],"termid":"GO:0043293"}


id: PBO:0044651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 2","termid":"PBO:0044651"}


id: PBO:0070114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 28 pseudogene","termid":"PBO:0070114"}


id: PBO:0005283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-silencing factor Ers1","termid":"PBO:0005283"}


id: GO:0102845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:3-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-18:3-2-16:0-monogalactosyldiacylglycerol desaturase activity","secondary_identifiers":["MetaCyc:RXN-8307"],"termid":"GO:0102845"}


id: GO:0098613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + methaneselenol => S-adenosyl-L-homocysteine + dimethyl selenide.","definition_xrefs":["PMID:14705","PMID:17988700","PMID:4380351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"methaneselenol methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408541"],"termid":"GO:0098613"}


id: PBO:0042569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A divergent transcript","termid":"PBO:0042569"}


id: PBO:0090698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3","termid":"PBO:0090698"}


id: PBO:0089966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated phospholipid scramblase Atg9","termid":"PBO:0089966"}


id: GO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sulfite ions from one side of a membrane to the other.","definition_xrefs":["GOC:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sulfite transmembrane transporter activity","synonyms":[{"name":"sulphite transporter activity","type":"exact"}],"termid":"GO:0000319"}


id: PBO:0066769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 67","termid":"PBO:0066769"}


id: GO:1901112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of actinorhodin.","definition_xrefs":["UniPathway:UPA00173","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"actinorhodin metabolic process","termid":"GO:1901110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"actinorhodin biosynthetic process","synonyms":[{"name":"actinorhodin anabolism","type":"exact"},{"name":"actinorhodin biosynthesis","type":"exact"},{"name":"actinorhodin formation","type":"exact"},{"name":"actinorhodin synthesis","type":"exact"}],"termid":"GO:1901112"}


id: GO:0140373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of one or more ubiquitin groups to a lysine residue at position 14 of the histone.","definition_xrefs":["GOC:mah","PMID:31468675"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K14 ubiquitination (obsolete GO:0140373)","synonyms":[{"name":"histone H3 ubiquitination at K14","type":"exact"},{"name":"histone H3-K14 ubiquitylation","type":"exact"},{"name":"histone H3K14 ubiquitination","type":"exact"}],"termid":"GO:0140373"}


id: GO:0015707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitrite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nitrite transport","termid":"GO:0015707"}


id: PR:Q9P6R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor CWC22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18034:SF3","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.01","secondary_identifiers":["UniProtKB:Q9P6R9"],"synonyms":[{"name":"SPBC13E7.01","type":"related"},{"name":"Spom972h-CWC22","type":"exact"},{"name":"complexed with cdc5 protein 22 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6R9"}


id: PBO:0073906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 4","termid":"PBO:0073906"}


id: PBO:0078252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 27","termid":"PBO:0078252"}


id: PR:O42662
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA large subunit methyltransferase F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase-like protein C27D7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.08c","secondary_identifiers":["UniProtKB:O42662"],"synonyms":[{"name":"Spom972h-rlmF","type":"exact"}],"termid":"PR:O42662"}


id: PBO:0059154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPP7 divergent transcript","termid":"PBO:0059154"}


id: PBO:0054334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1727","termid":"PBO:0054334"}


id: PBO:0005626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Ste6","termid":"PBO:0005626"}


id: GO:1904255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["PMID:15514116","GO_REF:0000059","GOC:kom","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of iron ion transmembrane transport","termid":"GO:0034760"},{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transporter activity","termid":"GO:1904254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of iron ion transmembrane transporter activity","synonyms":[{"name":"down regulation of iron cation channel activity","type":"exact"},{"name":"down regulation of iron channel activity","type":"exact"},{"name":"down regulation of iron-specific channel activity","type":"exact"},{"name":"down-regulation of iron cation channel activity","type":"exact"},{"name":"down-regulation of iron channel activity","type":"exact"},{"name":"down-regulation of iron-specific channel activity","type":"exact"},{"name":"downregulation of iron cation channel activity","type":"exact"},{"name":"downregulation of iron channel activity","type":"exact"},{"name":"downregulation of iron-specific channel activity","type":"exact"},{"name":"inhibition of iron cation channel activity","type":"narrow"},{"name":"inhibition of iron channel activity","type":"narrow"},{"name":"inhibition of iron-specific channel activity","type":"narrow"},{"name":"negative regulation of iron cation channel activity","type":"exact"},{"name":"negative regulation of iron channel activity","type":"exact"},{"name":"negative regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904255"}


id: PBO:0028665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_processing","termid":"PBO:0028665"}


id: GO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine biosynthetic process","synonyms":[{"name":"nicotine anabolism","type":"exact"},{"name":"nicotine biosynthesis","type":"exact"},{"name":"nicotine formation","type":"exact"},{"name":"nicotine synthesis","type":"exact"}],"termid":"GO:0042179"}


id: MOD:00320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-glutamic acid residue by a thioether bond to form 4-(S-L-cysteinyl)-L-glutamic acid.","definition_xrefs":["ChEBI:20293","RESID:AA0315","PubMed:11717396","PubMed:11555656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(S-L-cysteinyl)-L-glutamic acid","synonyms":[{"name":"(2S,3S,7R)-2,7-diamino-4-carboxy-5-thiaoctanedioic acid","type":"exact"},{"name":"(2S,4S)-2-amino-4-[(R)-2-amino-2-carboxyethyl]sulfanylpentanedioic acid","type":"exact"},{"name":"4-(L-cystein-S-yl)-L-glutamic acid","type":"exact"},{"name":"CROSSLNK 4-cysteinyl-glutamic acid (Cys-Glu)","type":"exact"}],"termid":"MOD:00320"}


id: PATO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an nonidentical molecule in an adjacent cell.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular adhesivity","termid":"PATO:0001531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterophilic","termid":"PATO:0001441"}


id: GO:0170027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An outer kinetochore complex involved in the attachment of microtubule ends to the chromosomes during mitosis. In humans, it contains the subunits SKA1, SKA2 and SKA3.","definition_xrefs":["PMID:19289083","PMID:22483620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0000776","GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"SKA complex","synonyms":[{"name":"SKA1 complex","type":"exact"}],"termid":"GO:0170027"}


id: GO:0032373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"positively_regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sterol transport","synonyms":[{"name":"activation of sterol transport","type":"narrow"},{"name":"stimulation of sterol transport","type":"narrow"},{"name":"up regulation of sterol transport","type":"exact"},{"name":"up-regulation of sterol transport","type":"exact"},{"name":"upregulation of sterol transport","type":"exact"}],"termid":"GO:0032373"}


id: PBO:0072074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 4","termid":"PBO:0072074"}


id: PBO:0029229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_EPC","termid":"PBO:0029229"}


id: SO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H+ mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat2P","termid":"SO:0002157"}


id: PBO:0038608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 4","termid":"PBO:0038608"}


id: GO:1990593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nascent polypeptide-associated complex, a heterodimeric protein complex that can reversibly bind to ribosomes and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:25487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nascent polypeptide-associated complex binding","synonyms":[{"name":"NAC binding","type":"exact"},{"name":"NACA binding","type":"exact"}],"termid":"GO:1990593"}


id: PBO:0050574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HS1BP3 intronic transcript 1","termid":"PBO:0050574"}


id: PBO:0081017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 48","termid":"PBO:0081017"}


id: PBO:0036203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0036203"}


id: PR:O14037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2C4.04c gene.","definition_xrefs":["UniProtKB:O14037","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0538 protein C2C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.04c","synonyms":[{"name":"Spom972h-SPAC2C4.04c","type":"exact"}],"termid":"PR:O14037"}


id: PBO:0063077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase gamma","termid":"PBO:0063077"}


id: PBO:0069722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1003, pseudogene","termid":"PBO:0069722"}


id: PBO:0036290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule plus-end binding protein, EB1 family Mal3","termid":"PBO:0036290"}


id: PBO:0017839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 1 (predicted)","termid":"PBO:0017839"}


id: PBO:0043511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 6","termid":"PBO:0043511"}


id: GO:0071266
data:
  {"annotated_genes":["SJAG_00395","SJAG_03102","SJAG_02290","SJAG_02972","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65774,106380],"is_not":false,"summary":null,"term":"GO:0071266"},{"annotations":[96169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process","termid":"GO:0071265"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_02290":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"'de novo' L-methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"'de novo' L-methionine anabolism","type":"exact"},{"name":"'de novo' L-methionine biosynthesis","type":"exact"},{"name":"'de novo' L-methionine formation","type":"exact"},{"name":"'de novo' L-methionine synthesis","type":"exact"}],"termid":"GO:0071266","terms_by_termid":{"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0071266":null}}


id: GO:0018675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-limonene + NADPH + H+ + O2 = (-)-trans-carveol + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(S)-limonene 6-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0713","MetaCyc:--LIMONENE-6-MONOOXYGENASE-RXN","RHEA:17945"],"synonyms":[{"name":"(-)-limonene 6-hydroxylase activity","type":"related"},{"name":"(-)-limonene 6-monooxygenase activity","type":"exact"},{"name":"(-)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating) activity","type":"related"},{"name":"(S)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"},{"name":"limonene 6-hydroxylase activity","type":"exact"}],"termid":"GO:0018675"}


id: GO:1904944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:BHF_miRNA","PMID:23575307","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac chamber formation","termid":"GO:1901212"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle formation","termid":"GO:1904942"},{"relation_name":"positively_regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac ventricle formation","synonyms":[{"name":"activation of cardiac ventricle formation","type":"narrow"},{"name":"up regulation of cardiac ventricle formation","type":"exact"},{"name":"up-regulation of cardiac ventricle formation","type":"exact"},{"name":"upregulation of cardiac ventricle formation","type":"exact"}],"termid":"GO:1904944"}


id: GO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the normal execution of the innate immune response of the host organism, the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host innate immune response","secondary_identifiers":["GO:0052309"],"synonyms":[{"name":"down regulation by symbiont of host innate immunity","type":"exact"},{"name":"down-regulation by symbiont of host innate immunity","type":"exact"},{"name":"downregulation by symbiont of host innate immunity","type":"exact"},{"name":"inhibition by symbiont of host innate immunity","type":"narrow"},{"name":"negative regulation by symbiont of host innate immune response","type":"exact"},{"name":"negative regulation by symbiont of host innate immunity","type":"exact"},{"name":"negative regulation of host innate immune response","type":"exact"},{"name":"negative regulation of innate immune response in other organism","type":"broad"},{"name":"suppression by symbiont of host innate immune response","type":"exact"},{"name":"suppression of host innate immune response","type":"exact"}],"termid":"GO:0052170"}


id: PBO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae BOI2","termid":"PBO:0016098"}


id: PBO:0069674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 951, pseudogene","termid":"PBO:0069674"}


id: FYPO:0001790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which plasmids are lost at the same frequency as in wild-type cells. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell phenotype","termid":"FYPO:0000002"},{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal plasmid loss","termid":"FYPO:0001790"}


id: PBO:0041026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'), 5'-bisphosphate nucleotidase 1","termid":"PBO:0041026"}


id: PBO:0058572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-4","termid":"PBO:0058572"}


id: PBO:0034615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-globally_decreased_meiotic_recombination","termid":"PBO:0034615"}


id: PBO:0081792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 722","termid":"PBO:0081792"}


id: PBO:0064205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLAG1 like zinc finger 1","termid":"PBO:0064205"}


id: PBO:0063769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 2","termid":"PBO:0063769"}


id: PBO:0061649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 21","termid":"PBO:0061649"}


id: GO:0046441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-lysine metabolic process","synonyms":[{"name":"D-lysine metabolism","type":"exact"}],"termid":"GO:0046441"}


id: PBO:0066696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 2","termid":"PBO:0066696"}


id: PBO:0070680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 51","termid":"PBO:0070680"}


id: GO:1903530
data:
  {"annotated_genes":["SJAG_03763","SJAG_04509","SJAG_00430","SJAG_00661","SJAG_03754","SJAG_02366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[89486,93959,70451,71558,83702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"},{"annotations":[70450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050708"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secretion by cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pm","PMID:12130530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00430":null,"SJAG_00661":null,"SJAG_02366":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of secretion by cell","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of cellular secretion","type":"exact"}],"termid":"GO:1903530","terms_by_termid":{"GO:0017157":null,"GO:0045921":null,"GO:0050708":null}}


id: GO:0061775
data:
  {"annotated_genes":["SJAG_00682","SJAG_00796","SJAG_05019"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71982,85414,91833],"is_not":false,"summary":null,"term":"GO:0061775"}]},"cv_name":"molecular_function","definition":"Facilitating a conformational change to load a cohesin complex around sister chromatids.","definition_xrefs":["PMID:26687354","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"cohesin loader activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cohesin loading activity","type":"exact"}],"termid":"GO:0061775","terms_by_termid":{"GO:0061775":null}}


id: GO:2001062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to xylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"xylan binding","termid":"GO:2001062"}


id: GO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes whereby a uridine residue in a tRNA is converted to 4-thiouridine. Typically 4-thiouridine is found at position 8, in many transfer RNAs.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA 4-thiouridine biosynthesis","termid":"GO:0002937"}


id: GO:0009428
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the rings of the bacterial-type flagellar basal body; anchors the basal body to the peptidoglycan layer.","definition_xrefs":["GOC:mtg_sensu","GOC:cilia","PMID:10572114","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, distal rod","termid":"GO:0009426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, distal rod, P ring","synonyms":[{"name":"flagellar basal body, distal rod, P ring","type":"related"},{"name":"flagellin-based flagellum basal body, distal rod, P ring","type":"exact"}],"termid":"GO:0009428"}


id: PBO:0029136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cordycepin","termid":"PBO:0029136"}


id: PBO:0026681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_maltose_carbon_source","termid":"PBO:0026681"}


id: GO:0051721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein phosphatase 2A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase 2A binding","synonyms":[{"name":"protein phosphatase 2 binding","type":"related"}],"termid":"GO:0051721"}


id: GO:0009957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:sm","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal cell fate specification","secondary_identifiers":["GO:0043356"],"synonyms":[{"name":"hypodermal cell fate specification","type":"related"}],"termid":"GO:0009957"}


id: PBO:0083282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene RRP14","termid":"PBO:0083282"}


id: PBO:0041696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 2","termid":"PBO:0041696"}


id: GO:0071002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the extensively base paired small nuclear RNAs U4atac and U6atac, a heptameric ring of Sm proteins associated with U4atac, the Lsm2-8 heptameric ring complex associated with U6atac, as well as several proteins that are unique to the U4atac snRNP or U6atac snRNPs, some of which remain associated with the U4atac/U6atac snRNA both while the U4atac snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897","PMID:14685174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U4atac/U6atac snRNP","termid":"GO:0071002"}


id: GO:0009184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate catabolic process","termid":"GO:0009137"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009184"}


id: PR:O14226
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exo84 gene.","definition_xrefs":["UniProtKB:O14226","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo84 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.08c","synonyms":[{"name":"Spom972h-exo84","type":"exact"}],"termid":"PR:O14226"}


id: PBO:0069507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 775, pseudogene","termid":"PBO:0069507"}


id: PR:P40236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hhp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog hhp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.12","synonyms":[{"name":"Spom972h-hhp2","type":"exact"}],"termid":"PR:P40236"}


id: GO:0007537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The inactivation of recombination at sequences around a mating type donor locus, with the consequence that the other donor is the only one available for mating type switching; exemplified by the HML locus and surrounding sequences on Chromosome III in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah","PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"donor selection","termid":"GO:0007535"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"inactivation of recombination (HML)","termid":"GO:0007537"}


id: SO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together a regulatory region and a transcript region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_regulatory_region_fusion","synonyms":[{"name":"transcript regulatory region fusion","type":"exact"}],"termid":"SO:0001890"}


id: PBO:0073389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETD4 antisense RNA 1","termid":"PBO:0073389"}


id: PBO:0060554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin","termid":"PBO:0060554"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: GO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a pilus, a short filamentous structure of bacterial cell, flagella-like in structure and generally present in many copies. Pili are variously involved in transfer of nucleic acids, adherence to surfaces, and formation of pellicles. Is required for bacterial conjugation, or can play a role in adherence to surfaces (when it is called a fimbrium), and in the formation of pellicles.","definition_xrefs":["GOC:dgh","GOC:mcc2","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"pilus organization","termid":"GO:0043711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pilus assembly","synonyms":[{"name":"fimbria assembly","type":"narrow"},{"name":"fimbria biogenesis","type":"related"},{"name":"fimbriae assembly","type":"narrow"},{"name":"fimbriae biogenesis","type":"related"},{"name":"fimbrial assembly","type":"narrow"},{"name":"fimbrium assembly","type":"narrow"},{"name":"fimbrium biogenesis","type":"related"},{"name":"pilus biogenesis","type":"related"},{"name":"pilus formation","type":"exact"}],"termid":"GO:0009297"}


id: PBO:0057199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 371b","termid":"PBO:0057199"}


id: FYPO:0008033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated, has no septum, and contains one nucleus, and is arrested in mototic S-phase","direct_ancestors":[{"relation_name":"is_a","term_name":"elongated mononucleate aseptate vegetative cell","termid":"FYPO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0000032","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"elongated mononucleate aseptate cell with cell cycle arrest in mitotic S-phase","termid":"FYPO:0008033"}


id: GO:0016229
data:
  {"annotated_genes":["SJAG_02855","SJAG_01326","SJAG_04954","SJAG_04124","SJAG_02291"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97298,112671],"is_not":false,"summary":null,"term":"GO:0016229"},{"annotations":[105408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003854"},{"annotations":[96164,95523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01326":null,"SJAG_02291":null,"SJAG_02855":null,"SJAG_04124":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"steroid dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016229","terms_by_termid":{"GO:0003854":null,"GO:0003865":null,"GO:0016229":null}}


id: PBO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrimin","termid":"PBO:0061577"}


id: GO:1902227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["PMID:16705167","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"down regulation of M-CSF signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"down-regulation of M-CSF signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"downregulation of M-CSF signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"inhibition of M-CSF signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"negative regulation of M-CSF signaling pathway","type":"exact"},{"name":"negative regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902227"}


id: PBO:0080413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS41 subunit of HOPS complex","termid":"PBO:0080413"}


id: PBO:0079746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase L1","termid":"PBO:0079746"}


id: FYPO:0001276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of MCM complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal MCM complex assembly","termid":"FYPO:0000448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased MCM complex assembly","synonyms":[{"name":"decreased MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased MCM complex assembly during vegetative growth","type":"exact"},{"name":"reduced MCM complex assembly","type":"exact"}],"termid":"FYPO:0001276"}


id: PBO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q37.3)","termid":"PBO:0047870"}


id: GO:0050507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indoxyl + UDP-D-glucose = H+ + indican + UDP.","definition_xrefs":["EC:2.4.1.220","RHEA:12004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"indoxyl-UDPG glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06048","MetaCyc:2.4.1.220-RXN"],"synonyms":[{"name":"UDP-glucose:indoxyl 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"indoxyl-UDPG-glucosyltransferase activity","type":"related"}],"termid":"GO:0050507"}


id: PBO:0027478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytokinesis_checkpoint","termid":"PBO:0027478"}


id: SO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_insert","synonyms":[{"name":"engineered insert","type":"exact"}],"termid":"SO:0000915"}


id: PBO:0075300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 1","termid":"PBO:0075300"}


id: PBO:0073809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 14","termid":"PBO:0073809"}


id: GO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of BMP signaling pathway","termid":"GO:0030510"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"negatively_regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of BMP signaling pathway","secondary_identifiers":["GO:0090099"],"synonyms":[{"name":"down regulation of BMP signaling pathway","type":"exact"},{"name":"down-regulation of BMP signaling pathway","type":"exact"},{"name":"downregulation of BMP signaling pathway","type":"exact"},{"name":"inhibition of BMP signaling pathway","type":"narrow"},{"name":"negative regulation of BMP receptor signaling pathway","type":"related"},{"name":"negative regulation of BMP signalling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"negative regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030514"}


id: PBO:0028707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_meiotic_cell_cycle","termid":"PBO:0028707"}


id: GO:0043274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phospholipase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"phospholipase binding","termid":"GO:0043274"}


id: SO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of two segments of homology found at all three mating loci (HML, MAT and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_region","synonyms":[{"name":"x-region","type":"exact"}],"termid":"SO:0002030"}


id: PBO:0062254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily C member 1","termid":"PBO:0062254"}


id: PBO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13","termid":"PBO:0004397"}


id: FYPO:0002877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abolished transcription","synonyms":[{"name":"transcription abolished","type":"exact"}],"termid":"FYPO:0002877"}


id: GO:1990812
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin, stiff protrusion extended by the leading edge of an axonal or dendritic growth cone.","definition_xrefs":["PMID:25598228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium","termid":"GO:0030175"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone filopodium","termid":"GO:1990812"}


id: GO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + NAD+ + H2O = hydroxylamine + NADH + H+.","definition_xrefs":["EC:1.7.1.10","MetaCyc:HYDROXYLAMINE-REDUCTASE-NADH-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxylamine reductase (NADH) activity","secondary_identifiers":["RHEA:20581"],"synonyms":[{"name":"N-hydroxy amine reductase activity","type":"related"},{"name":"NADH-hydroxylamine reductase activity","type":"related"},{"name":"NADH2:hydroxylamine oxidoreductase activity","type":"related"},{"name":"NADH:hydroxylamine oxidoreductase activity","type":"related"},{"name":"ammonium dehydrogenase activity","type":"related"},{"name":"ammonium:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxylamine reductase (NADH2)","type":"related"}],"termid":"GO:0050460"}


id: PBO:0041992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 38","termid":"PBO:0041992"}


id: GO:1901261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp spore cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp development","termid":"GO:0031156"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sorocarp spore cell differentiation","termid":"GO:0044671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"}


id: GO:0016785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a selenium-containing group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"selenotransferase activity","secondary_identifiers":["EC:2.9.1.-","GO:0016786"],"synonyms":[{"name":"transferase activity, transferring selenium-containing groups","type":"exact"}],"termid":"GO:0016785"}


id: PBO:0069271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 527, pseudogene","termid":"PBO:0069271"}


id: GO:0045743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"activation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of FGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of FGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of FGFR signaling pathway","type":"exact"},{"name":"stimulation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of fibroblast growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045743"}


id: PBO:0075044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-7","termid":"PBO:0075044"}


id: PBO:0087390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Steryl ester hydrolase; one of three gene products (Yeh1p, Yeh2p, Tgl1p) responsible for steryl ester hydrolase activity and involved in sterol homeostasis; localized to lipid particle membranes","termid":"PBO:0087390"}


id: PBO:0063385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD4 antisense RNA 1","termid":"PBO:0063385"}


id: FYPO:0000824
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114398,114400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[114399,114401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[114384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[114386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[114385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"},{"relation_name":"output_of","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"altered RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: abnormal","type":"related"},{"name":"abnormal RNA level","type":"exact"},{"name":"altered cellular RNA level","type":"exact"},{"name":"altered cellular mRNA level","type":"narrow"},{"name":"altered transcript level","type":"exact"}],"termid":"FYPO:0000824","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: GO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["PMID:16429326","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"inositol hexakisphosphate 6-kinase activity","termid":"GO:0000831"}


id: PBO:0057915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3618","termid":"PBO:0057915"}


id: PR:Q9Y7Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Z1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.10","synonyms":[{"name":"Spom972h-nop16","type":"exact"}],"termid":"PR:Q9Y7Z1"}


id: PBO:0071271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 5","termid":"PBO:0071271"}


id: PATO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000354 protein composition value (obsolete PATO:0000354)","termid":"PATO:0000354"}


id: GO:1902696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine to isobutanol.","definition_xrefs":["PMID:23642236","GOC:TermGenie","GO_REF:0000093","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"},{"relation_name":"is_a","term_name":"isobutanol metabolic process","termid":"GO:1901960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"glycine catabolic process to isobutanol","secondary_identifiers":["GO:1990293"],"synonyms":[{"name":"glycine breakdown to isobutanol","type":"exact"},{"name":"glycine catabolism to isobutanol","type":"exact"},{"name":"glycine degradation to isobutanol","type":"exact"}],"termid":"GO:1902696"}


id: PBO:0088873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24c","termid":"PBO:0088873"}


id: GO:0030985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of high molecular mass.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"high molecular weight kininogen binding","synonyms":[{"name":"HK binding","type":"exact"},{"name":"HMW kininogen binding","type":"exact"}],"termid":"GO:0030985"}


id: FYPO:0009029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing arginine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on arginine nitrogen source","synonyms":[{"name":"increased growth on arginine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on arginine nitrogen source","type":"exact"}],"termid":"FYPO:0009029"}


id: PBO:0045442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L4 pseudogene 2","termid":"PBO:0045442"}


id: GO:0051742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyl-6-solanyl-1,4-benzoquinone + S-adenosyl-methionine = 2,3-dimethyl-6-solanyl-1,4-benzoquinone + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:RXN-2762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"2-methyl-6-solanyl-1,4-benzoquinone methyltransferase activity","secondary_identifiers":["RHEA:37999"],"synonyms":[{"name":"MSBQ methyltransferase activity","type":"exact"}],"termid":"GO:0051742"}


id: PBO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT family","termid":"PBO:0000808"}


id: PR:Q10149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grh1 gene.","definition_xrefs":["UniProtKB:Q10149","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.02c","synonyms":[{"name":"Spom972h-grh1","type":"exact"}],"termid":"PR:Q10149"}


id: GO:0016486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"peptide hormone processing","termid":"GO:0016486"}


id: PBO:0072965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1A member 1","termid":"PBO:0072965"}


id: PBO:0028749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascospore_wall_morphology","termid":"PBO:0028749"}


id: GO:0008180
data:
  {"annotated_genes":["SJAG_03733","SJAG_00662","SJAG_03325","SJAG_00720","SJAG_02764","SJAG_04011","SJAG_04948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71889,75385,87123,88526,88641,95606,96813],"is_not":false,"summary":null,"term":"GO:0008180"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome.","definition_xrefs":["PMID:14570571","PMID:11019806","PMID:12186635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_00720":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"COP9 signalosome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"COP9 complex","type":"exact"},{"name":"CSN","type":"exact"},{"name":"signalosome","type":"broad"}],"termid":"GO:0008180","terms_by_termid":{"GO:0008180":null}}


id: PBO:0041662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 7","termid":"PBO:0041662"}


id: PBO:0084186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone E3 ligase, component of CORVET membrane tethering complex; peripheral vacuolar membrane protein required for protein trafficking and vacuole biogenesis; interacts with Pep7p; involved in ubiquitination and degradation of excess histones","termid":"PBO:0084186"}


id: FYPO:0000152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation","termid":"FYPO:0000713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to nitrogen starvation","synonyms":[{"name":"abnormal cellular response to nitrogen depletion","type":"exact"},{"name":"abnormal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000152"}


id: PBO:0071495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 36","termid":"PBO:0071495"}


id: PBO:0041455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf67 antisense RNA 1","termid":"PBO:0041455"}


id: PBO:0031532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine_amidase_activity","termid":"PBO:0031532"}


id: PBO:0040323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit epsilon pseudogene 2","termid":"PBO:0040323"}


id: PBO:0090850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ufe1","termid":"PBO:0090850"}


id: FYPO:0002171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a low temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at low temperature (obsolete FYPO:0002171)","synonyms":[{"name":"cell viable at low temperature","type":"exact"},{"name":"viable cell at low temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at low temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0002171"}


id: GO:1905784
data:
  {"annotated_genes":["SJAG_00071","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[84707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anaphase-promoting complex-dependent catabolic process.","definition_xrefs":["PMID:10921876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"regulates","term_name":"anaphase-promoting complex-dependent catabolic process","termid":"GO:0031145"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of anaphase-promoting complex-dependent catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905784","terms_by_termid":{"GO:1905785":null,"GO:1905786":null}}


id: PBO:0030151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_aluminium","termid":"PBO:0030151"}


id: PBO:0046582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 24","termid":"PBO:0046582"}


id: PBO:0074221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 5","termid":"PBO:0074221"}


id: PBO:0066356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 3","termid":"PBO:0066356"}


id: PBO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complements S. cerevisiae RPB6","termid":"PBO:0016579"}


id: PBO:0031085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_phenotype_during_vegetative_growth","termid":"PBO:0031085"}


id: GO:1901664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NAD+ ADP-ribosyltransferase activity","synonyms":[{"name":"regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901664"}


id: GO:0019728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of allysine to 2-aminoadipic acid.","definition_xrefs":["RESID:AA0122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein oxidation","termid":"GO:0018158"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-allysine oxidation to 2-aminoadipic acid","secondary_identifiers":["RESID:AA0370"],"termid":"GO:0019728"}


id: PBO:0058322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4695","termid":"PBO:0058322"}


id: PBO:0043113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHURC1-FNTB readthrough","termid":"PBO:0043113"}


id: PBO:0041308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 42","termid":"PBO:0041308"}


id: GO:0034849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-naphthoyl-CoA + OH- = 2-naphthoate + CoASH.","definition_xrefs":["UM-BBD_reactionID:r1262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"2-naphthoate CoA-transferase activity","termid":"GO:0034849"}


id: PBO:0071014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 16","termid":"PBO:0071014"}


id: GO:1903152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any copper ion transmembrane transporter activity that is involved in copper ion import into cell.","definition_xrefs":["GO_REF:0000061","ISBN:0-8249-3695-6","GOC:dos","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transmembrane transporter activity involved in copper ion import into cell (obsolete GO:1903152)","synonyms":[{"name":"copper ion transmembrane transporter activity involved in copper cation import into cell","type":"exact"},{"name":"copper ion transmembrane transporter activity involved in copper ion import into cell","type":"exact"},{"name":"intracellular copper ion transporter involved in copper cation import into cell","type":"narrow"},{"name":"intracellular copper ion transporter involved in copper ion import into cell","type":"narrow"},{"name":"plasma membrane copper transporter involved in copper cation import into cell","type":"narrow"},{"name":"plasma membrane copper transporter involved in copper ion import into cell","type":"narrow"}],"termid":"GO:1903152"}


id: GO:0036366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of transforming growth factor beta 3 (TGF-beta3) from its latent state.","definition_xrefs":["GOC:sl","PMID:12482908","PMID:9170210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta activation","termid":"GO:0036363"},{"relation_name":"part_of","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transforming growth factor beta3 activation","synonyms":[{"name":"TGF-beta 3 activation","type":"exact"},{"name":"TGFB3 activation","type":"exact"},{"name":"TGFbeta 3 activation","type":"exact"}],"termid":"GO:0036366"}


id: PBO:0056373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1 pseudogene 1","termid":"PBO:0056373"}


id: GO:0050138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ + nicotinate = 6-hydroxynicotinate + H+ + NADPH.","definition_xrefs":["EC:1.17.1.5","RHEA:12236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nicotinate dehydrogenase activity","secondary_identifiers":["MetaCyc:NICOTINATE-DEHYDROGENASE-RXN","MetaCyc:RXN-7637","KEGG_REACTION:R01720"],"synonyms":[{"name":"nicotinate hydroxylase activity","type":"related"},{"name":"nicotinate:NADP+ 6-oxidoreductase (hydroxylating)","type":"related"},{"name":"nicotinic acid hydroxylase activity","type":"related"}],"termid":"GO:0050138"}


id: PBO:0024855
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia type II","termid":"PBO:0024855"}


id: PBO:0018020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIK complex complex ubiquitin-protein ligase E3 subunit, Pmh1","termid":"PBO:0018020"}


id: GO:0071013
data:
  {"annotated_genes":["SJAG_00643","SJAG_02279","SJAG_00322","SJAG_01870","SJAG_03711","SJAG_02396","SJAG_02304","SJAG_05240","SJAG_02686","SJAG_03601","SJAG_05235","SJAG_00571","SJAG_00859","SJAG_04898","SJAG_00602","SJAG_02308","SJAG_00446","SJAG_05025","SJAG_02687","SJAG_02844","SJAG_04117","SJAG_01214","SJAG_02879","SJAG_02469","SJAG_00498","SJAG_04230","SJAG_02317","SJAG_04497","SJAG_05224","SJAG_01008","SJAG_00911","SJAG_02843","SJAG_00147","SJAG_16453","SJAG_00639","SJAG_01629","SJAG_03460","SJAG_00414","SJAG_04318","SJAG_01301","SJAG_02722"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70132,70566,70597,70691,70784,71887,71961,72162,72222,72318,72909,73558,73638,73643,74765,74949,75008,75116,75466,75971,76092,76334,77073,77239,77567,77633,77962,78128,83578,88325,103025,103599,106562,108129,108702,112043],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[76922,71950,76391,76866,78077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.","definition_xrefs":["GOC:ab","ISBN:0879695897","ISBN:0879697393","GOC:krc","GOC:mah","PMID:18322460","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00498":null,"SJAG_00571":null,"SJAG_00602":null,"SJAG_00639":null,"SJAG_00643":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01629":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02308":null,"SJAG_02317":null,"SJAG_02396":null,"SJAG_02469":null,"SJAG_02686":null,"SJAG_02687":null,"SJAG_02722":null,"SJAG_02843":null,"SJAG_02844":null,"SJAG_02879":null,"SJAG_03460":null,"SJAG_03601":null,"SJAG_03711":null,"SJAG_04117":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04497":null,"SJAG_04898":null,"SJAG_05025":null,"SJAG_05224":null,"SJAG_05235":null,"SJAG_05240":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"catalytic step 2 spliceosome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"mammalian spliceosomal complex C","type":"narrow"},{"name":"mammalian spliceosomal complex C1","type":"narrow"},{"name":"yeast spliceosomal complex A2-2","type":"narrow"}],"termid":"GO:0071013","terms_by_termid":{"GO:0071007":null,"GO:0071013":null}}


id: PBO:0028626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_shmoo_tip","termid":"PBO:0028626"}


id: GO:2000053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"regulates","term_name":"Wnt signaling pathway involved in dorsal/ventral axis specification","termid":"GO:0044332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway involved in dorsal/ventral axis specification","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000053"}


id: PBO:0058014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3940","termid":"PBO:0058014"}


id: FYPO:0004534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus begins earlier than normal.","definition_xrefs":["PMID:16751704","PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature ascospore release from ascus","synonyms":[{"name":"accelerated ascospore release from ascus","type":"related"},{"name":"advanced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004534"}


id: PR:O74977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vms1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VMS1 homolog C1827.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.04","synonyms":[{"name":"Spom972h-vms1","type":"exact"}],"termid":"PR:O74977"}


id: PATO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume quality inhering in a degenerating cell by virtue of the bearer's exhibiting an increase in volume associated with cytoplasmic abnormalities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased volume","termid":"PATO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ballooning","termid":"PATO:0002093"}


id: PBO:0049612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 15","termid":"PBO:0049612"}


id: GO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-valine from one side of a membrane to the other. L-valine is 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-valine transmembrane transporter activity","synonyms":[{"name":"L-valine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0005304"}


id: PBO:0053502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 485","termid":"PBO:0053502"}


id: PBO:0080139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VASH1 divergent transcript","termid":"PBO:0080139"}


id: PBO:0084064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0084064"}


id: FYPO:0000953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which the cellular response to a chemical stimulus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to chemical stimulus","termid":"FYPO:0000953"}


id: GO:0030951
data:
  {"annotated_genes":["SJAG_03540","SJAG_02624","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94758,113248,113751],"is_not":false,"summary":null,"term":"GO:0030951"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007163","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"establishment or maintenance of microtubule cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030951","terms_by_termid":{"GO:0030951":null}}


id: PBO:0066504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X2","termid":"PBO:0066504"}


id: PR:P50524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpn12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.01","synonyms":[{"name":"Spom972h-rpn12","type":"exact"}],"termid":"PR:P50524"}


id: PBO:0054940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2354","termid":"PBO:0054940"}


id: PBO:0050223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 1","termid":"PBO:0050223"}


id: GO:0120171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that forms at the cell cortex in response to pheromone treatment and is required for the polarized growth of haploid yeast cells towards a mating partner during yeast mating. In the yeast Saccharomyces cerevisiae, this complex consists of Cdc24p, Far1p, Ste4p (G-protein beta subunit) and Ste18p (G-protein gamma subunit).","definition_xrefs":["PMID:10087263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cdc24p-Far1p-Gbetagamma complex","synonyms":[{"name":"CDC24-FAR1-BG complex","type":"exact"},{"name":"CDC24-FAR1-Gbetagamma complex","type":"exact"},{"name":"Cdc24p-Far1p-BG complex","type":"exact"}],"termid":"GO:0120171"}


id: GO:0140208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that occurs as a result of mitochondrial fragmentation.","definition_xrefs":["PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process in response to mitochondrial fragmentation","synonyms":[{"name":"apoptosis in response to mitochondrial fragmentation","type":"exact"}],"termid":"GO:0140208"}


id: PBO:0049293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 12, pseudogene","termid":"PBO:0049293"}


id: GO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)acetaldehyde oxime = (indol-3-yl)acetonitrile + H2O.","definition_xrefs":["RHEA:23156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"indoleacetaldoxime dehydratase activity","secondary_identifiers":["KEGG_REACTION:R04093","MetaCyc:RXN-19838","EC:4.8.1.3"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"3-indoleacetaldoxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldoxime hydro-lyase activity","type":"exact"},{"name":"indoleacetaldoxime hydro-lyase activity","type":"exact"}],"termid":"GO:0047720"}


id: PBO:0050581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 5","termid":"PBO:0050581"}


id: PBO:0004911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting receptor for vacuolar proteins, Vps10","termid":"PBO:0004911"}


id: GO:0097062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a dendritic spine in a stable functional or structural state. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.","definition_xrefs":["PMID:20410104","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"dendritic spine organization","termid":"GO:0097061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine maintenance","termid":"GO:0097062"}


id: PBO:0044818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109A (pseudogene)","termid":"PBO:0044818"}


id: PBO:0065631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 11","termid":"PBO:0065631"}


id: GO:0098588
data:
  {"annotated_genes":["SJAG_02231","SJAG_00800","SJAG_00416","SJAG_04907","SJAG_00598","SJAG_04955","SJAG_04732","SJAG_02640","SJAG_00209","SJAG_04770","SJAG_00906","SJAG_02805","SJAG_00669","SJAG_00812","SJAG_04910","SJAG_04906","SJAG_02349","SJAG_02578","SJAG_05259","SJAG_05194","SJAG_02168","SJAG_00534","SJAG_00699","SJAG_04643","SJAG_03464","SJAG_01177","SJAG_01783","SJAG_00265","SJAG_01299","SJAG_00108","SJAG_03435","SJAG_01400","SJAG_03256","SJAG_03324","SJAG_03250","SJAG_01929","SJAG_03442","SJAG_02103","SJAG_02330","SJAG_00999","SJAG_02902","SJAG_04763","SJAG_01913","SJAG_00380","SJAG_03447","SJAG_03138","SJAG_01032","SJAG_01780","SJAG_00605","SJAG_02265","SJAG_00136","SJAG_03497","SJAG_01941","SJAG_01505","SJAG_04714","SJAG_03555","SJAG_04996","SJAG_00732","SJAG_00072","SJAG_01134","SJAG_04697","SJAG_01795","SJAG_01078","SJAG_04668","SJAG_02100","SJAG_01685","SJAG_01184","SJAG_03015","SJAG_04002","SJAG_04963","SJAG_03158","SJAG_01558","SJAG_02424","SJAG_00212","SJAG_03781","SJAG_03889","SJAG_02177","SJAG_00557","SJAG_05207","SJAG_00143","SJAG_03072","SJAG_00064","SJAG_03440","SJAG_01236","SJAG_01036","SJAG_02399","SJAG_00204","SJAG_01939","SJAG_01080","SJAG_04966","SJAG_01803","SJAG_03790","SJAG_00031","SJAG_01817","SJAG_00771","SJAG_00428","SJAG_01133","SJAG_01206","SJAG_04340","SJAG_00261","SJAG_02429","SJAG_03371","SJAG_04401","SJAG_02565","SJAG_01276","SJAG_00051","SJAG_01165","SJAG_02361","SJAG_01260","SJAG_03355","SJAG_00029","SJAG_02117","SJAG_04513","SJAG_04616","SJAG_03502","SJAG_01021","SJAG_02316","SJAG_03892","SJAG_05344","SJAG_02910","SJAG_02414","SJAG_04936","SJAG_02996","SJAG_04370","SJAG_03899","SJAG_03416","SJAG_03656","SJAG_00171","SJAG_07012","SJAG_00457","SJAG_03511","SJAG_02356","SJAG_02656","SJAG_03328","SJAG_00810","SJAG_03953","SJAG_03909","SJAG_04975","SJAG_00569","SJAG_00570","SJAG_02208","SJAG_00959","SJAG_04162","SJAG_04502","SJAG_04270","SJAG_00824","SJAG_03302","SJAG_04232","SJAG_03783","SJAG_00947","SJAG_02603","SJAG_04471","SJAG_00804","SJAG_05286","SJAG_05294","SJAG_01312","SJAG_00370","SJAG_02782","SJAG_01633","SJAG_02234","SJAG_02433","SJAG_03850","SJAG_01516","SJAG_00276","SJAG_00299","SJAG_04867","SJAG_03137","SJAG_03848","SJAG_03175","SJAG_02848","SJAG_00235","SJAG_00891","SJAG_03667","SJAG_02315","SJAG_02344","SJAG_02354","SJAG_02699","SJAG_03987","SJAG_01344","SJAG_01598","SJAG_03406","SJAG_03499","SJAG_01983","SJAG_00638","SJAG_03895","SJAG_04506","SJAG_01619","SJAG_00821","SJAG_04402","SJAG_00328","SJAG_00525","SJAG_01264","SJAG_00183","SJAG_00368","SJAG_01471","SJAG_05013","SJAG_05736","SJAG_03871","SJAG_00948","SJAG_03347","SJAG_03515","SJAG_00175","SJAG_01242","SJAG_04028","SJAG_00650","SJAG_04759","SJAG_03089","SJAG_02539","SJAG_02641","SJAG_00379","SJAG_03715","SJAG_03005","SJAG_02853","SJAG_04112","SJAG_04018","SJAG_05345","SJAG_00877","SJAG_01324","SJAG_02289","SJAG_04644","SJAG_00104","SJAG_00688","SJAG_04349","SJAG_01320","SJAG_00301","SJAG_05184","SJAG_02023","SJAG_03403","SJAG_03528","SJAG_03690","SJAG_03907","SJAG_04489","SJAG_01990","SJAG_03725","SJAG_02519","SJAG_01854","SJAG_02665","SJAG_03450","SJAG_05210","SJAG_03345","SJAG_04739","SJAG_02587","SJAG_03552","SJAG_04474","SJAG_00900","SJAG_02765","SJAG_00192","SJAG_02693","SJAG_06588","SJAG_04146","SJAG_01509","SJAG_03955","SJAG_01397","SJAG_02084","SJAG_01809","SJAG_02482","SJAG_03558","SJAG_01880","SJAG_01508","SJAG_04565","SJAG_03009","SJAG_04496","SJAG_04391","SJAG_01357","SJAG_03358","SJAG_02716","SJAG_00702","SJAG_00360","SJAG_02706","SJAG_03670","SJAG_04912","SJAG_01409","SJAG_01951","SJAG_03960","SJAG_00284","SJAG_02282","SJAG_03313","SJAG_00561","SJAG_04315","SJAG_02029","SJAG_01972","SJAG_03493","SJAG_04725","SJAG_01991","SJAG_02543","SJAG_04609","SJAG_05268","SJAG_03710","SJAG_02997","SJAG_00516","SJAG_01447","SJAG_01112","SJAG_02619","SJAG_02453","SJAG_01027","SJAG_04592","SJAG_04569","SJAG_04203","SJAG_01415","SJAG_00974","SJAG_01319","SJAG_01960","SJAG_03100","SJAG_00754","SJAG_04015","SJAG_02723","SJAG_04023","SJAG_00785","SJAG_00880","SJAG_00655","SJAG_04822","SJAG_03928","SJAG_04095","SJAG_02355","SJAG_04517","SJAG_00816","SJAG_04070","SJAG_04406","SJAG_03153","SJAG_01212","SJAG_03082","SJAG_04024","SJAG_03400","SJAG_01167","SJAG_01145","SJAG_01981","SJAG_06309","SJAG_05209","SJAG_00339","SJAG_03933","SJAG_03415","SJAG_02588","SJAG_04698","SJAG_02839","SJAG_03268","SJAG_01571","SJAG_01642","SJAG_01305","SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76563,108036,108251,96632],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[106875,77197,103689,73832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[108883,85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000421"},{"annotations":[110951,85003,100237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036266"},{"annotations":[77726,91332,112649,86442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033106"},{"annotations":[108157,90502],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[78375,73468],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[89812,84664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[94006,71123,77132,76904,102507,78478,88858,111563,73262],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[75494,75881,74540,91114,74187,71475,72902,77313,74919,71528],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[86290],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[100238,101984,94794,99905,110952,85006,96023,97972],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032473"},{"annotations":[91492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[97463,94235,60532,76989,72443,97451,78707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010008"},{"annotations":[73549,70655,75432,109429,96583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"},{"annotations":[103033,70264,78534,102903,111790],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"},{"annotations":[72325,83912],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[77322,70987,72223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[99174,76537,75179,71258,75590,70193],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[102597],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031315"},{"annotations":[90245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097629"},{"annotations":[77903,87164,109565,75324,84823,104717,112678,89694,102777,94106,97452,74260,89402,72896,90247,87767,83534,99245,105574,78390,89346,112737,111727,78560,105198,104031,94410,95450,77425,97130,99029,102577,91998,104630,95757,107066,71185,91580,74053,111798,83810,93911,70953,78677,86118,108487,113301,91494,84891,78310,84905,95735,112931,77337,72214,90218,78908,92933,108799,110095,72434,78706,91734,111388,73781,89401,89667,100380,87709,91256,70463,100538,101117,77875,72442,74756,72827,94246,72086,74381,83828,88535,92630,93608,94370,88614,91367,84845,93185,99362,70750,72809,91624,102073,75661,95486,103225,102065,103636,105705,107088,100314,89528,108660,109570,112183,70618,112397,73379,112522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000329"},{"annotations":[88778,100035,71297,71723,91151,93658,95695,102741,88743,104365,91884,113470,107936,86165,106232,104326,75108,102686,77767,104988,73546,59397,74981,58189,78526,112055,90745,101367,91999,84152,96262,66550,60972,110750,112753,101172,74825,101393,84224,77721,84907,75444,110791,77346,100474,113534,58574,76033,100235,106053,76274,90014,103778,107525,77133,66841,87194,88538,99757,88972,105131,107639,94990,103229,84747,71640,99951,105178,88042,84737,66185,92483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000139"},{"annotations":[83913,93227,77323,95029,96585,75433,87660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[70239],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[93453,113160,83304,100360],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"},{"annotations":[107072,105719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140595"},{"annotations":[104624,84803,96965,87603,87574,71632,72747,91042,101332,112716,92469,91692,104229,112808,99802,87795,96298,98221,103091,113858,100044,96841,74392,101394,101210,100090,71016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005741"},{"annotations":[94957,86593,95056,70674,101582,102951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005742"},{"annotations":[89554,114439,87768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[84300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005640"},{"annotations":[83535,108801,105315,78705],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070772"},{"annotations":[112401,70948,73139,74809,100649,113274,102082,96809,76971,86143,71708,110944,83997,63524,91028,92537,73303,106524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005778"},{"annotations":[89695,100540,103226,88536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071986"},{"annotations":[70263,94132,86094,73223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001401"},{"annotations":[73003,103666,93614,73408],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005784"},{"annotations":[91339,86298,72956,70224],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[105088,89902],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005785"},{"annotations":[93615],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071261"},{"annotations":[100071,89941,95817,113526,71458,76167,95758],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902500"},{"annotations":[102532,106252,93881,73333,102044,98464,105134,74854,84099,95085,85169,91696,100874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005774"},{"annotations":[85576,91257,95451,99363,87710,85888],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[95525,71329,98130,94462,83829,113811,105200,92198],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"},{"annotations":[94413,74755],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer that forms the outer-most layer of an organelle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":339,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00031":null,"SJAG_00048":null,"SJAG_00051":null,"SJAG_00064":null,"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00136":null,"SJAG_00143":null,"SJAG_00171":null,"SJAG_00175":null,"SJAG_00183":null,"SJAG_00192":null,"SJAG_00204":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00235":null,"SJAG_00261":null,"SJAG_00265":null,"SJAG_00276":null,"SJAG_00284":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00328":null,"SJAG_00339":null,"SJAG_00360":null,"SJAG_00368":null,"SJAG_00370":null,"SJAG_00379":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00428":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00525":null,"SJAG_00534":null,"SJAG_00557":null,"SJAG_00561":null,"SJAG_00569":null,"SJAG_00570":null,"SJAG_00598":null,"SJAG_00605":null,"SJAG_00638":null,"SJAG_00650":null,"SJAG_00655":null,"SJAG_00669":null,"SJAG_00688":null,"SJAG_00699":null,"SJAG_00702":null,"SJAG_00732":null,"SJAG_00754":null,"SJAG_00771":null,"SJAG_00785":null,"SJAG_00800":null,"SJAG_00804":null,"SJAG_00810":null,"SJAG_00812":null,"SJAG_00816":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_00880":null,"SJAG_00891":null,"SJAG_00900":null,"SJAG_00906":null,"SJAG_00947":null,"SJAG_00948":null,"SJAG_00959":null,"SJAG_00974":null,"SJAG_00999":null,"SJAG_01021":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01036":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01112":null,"SJAG_01133":null,"SJAG_01134":null,"SJAG_01145":null,"SJAG_01165":null,"SJAG_01167":null,"SJAG_01177":null,"SJAG_01184":null,"SJAG_01206":null,"SJAG_01212":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01260":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01299":null,"SJAG_01305":null,"SJAG_01312":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01357":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01409":null,"SJAG_01415":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01505":null,"SJAG_01508":null,"SJAG_01509":null,"SJAG_01516":null,"SJAG_01558":null,"SJAG_01571":null,"SJAG_01598":null,"SJAG_01619":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01685":null,"SJAG_01780":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01809":null,"SJAG_01817":null,"SJAG_01854":null,"SJAG_01880":null,"SJAG_01913":null,"SJAG_01929":null,"SJAG_01939":null,"SJAG_01941":null,"SJAG_01951":null,"SJAG_01960":null,"SJAG_01972":null,"SJAG_01981":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02084":null,"SJAG_02100":null,"SJAG_02103":null,"SJAG_02117":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02208":null,"SJAG_02231":null,"SJAG_02234":null,"SJAG_02265":null,"SJAG_02282":null,"SJAG_02289":null,"SJAG_02315":null,"SJAG_02316":null,"SJAG_02330":null,"SJAG_02344":null,"SJAG_02349":null,"SJAG_02354":null,"SJAG_02355":null,"SJAG_02356":null,"SJAG_02361":null,"SJAG_02399":null,"SJAG_02414":null,"SJAG_02424":null,"SJAG_02429":null,"SJAG_02433":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02519":null,"SJAG_02539":null,"SJAG_02543":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02587":null,"SJAG_02588":null,"SJAG_02603":null,"SJAG_02619":null,"SJAG_02640":null,"SJAG_02641":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02693":null,"SJAG_02699":null,"SJAG_02706":null,"SJAG_02716":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_02782":null,"SJAG_02805":null,"SJAG_02839":null,"SJAG_02848":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_02910":null,"SJAG_02996":null,"SJAG_02997":null,"SJAG_03005":null,"SJAG_03009":null,"SJAG_03015":null,"SJAG_03072":null,"SJAG_03082":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03153":null,"SJAG_03158":null,"SJAG_03175":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03268":null,"SJAG_03302":null,"SJAG_03313":null,"SJAG_03324":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03347":null,"SJAG_03355":null,"SJAG_03358":null,"SJAG_03371":null,"SJAG_03400":null,"SJAG_03403":null,"SJAG_03406":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03435":null,"SJAG_03440":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03497":null,"SJAG_03499":null,"SJAG_03502":null,"SJAG_03511":null,"SJAG_03515":null,"SJAG_03528":null,"SJAG_03552":null,"SJAG_03555":null,"SJAG_03558":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03670":null,"SJAG_03690":null,"SJAG_03710":null,"SJAG_03715":null,"SJAG_03725":null,"SJAG_03781":null,"SJAG_03783":null,"SJAG_03790":null,"SJAG_03848":null,"SJAG_03850":null,"SJAG_03871":null,"SJAG_03889":null,"SJAG_03892":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03907":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03933":null,"SJAG_03953":null,"SJAG_03955":null,"SJAG_03960":null,"SJAG_03987":null,"SJAG_04002":null,"SJAG_04015":null,"SJAG_04018":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04028":null,"SJAG_04070":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04146":null,"SJAG_04162":null,"SJAG_04203":null,"SJAG_04232":null,"SJAG_04270":null,"SJAG_04315":null,"SJAG_04340":null,"SJAG_04349":null,"SJAG_04370":null,"SJAG_04391":null,"SJAG_04401":null,"SJAG_04402":null,"SJAG_04406":null,"SJAG_04471":null,"SJAG_04474":null,"SJAG_04489":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04609":null,"SJAG_04616":null,"SJAG_04643":null,"SJAG_04644":null,"SJAG_04668":null,"SJAG_04697":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04725":null,"SJAG_04732":null,"SJAG_04739":null,"SJAG_04759":null,"SJAG_04763":null,"SJAG_04770":null,"SJAG_04822":null,"SJAG_04867":null,"SJAG_04906":null,"SJAG_04907":null,"SJAG_04910":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_04996":null,"SJAG_05013":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05207":null,"SJAG_05209":null,"SJAG_05210":null,"SJAG_05259":null,"SJAG_05268":null,"SJAG_05286":null,"SJAG_05294":null,"SJAG_05344":null,"SJAG_05345":null,"SJAG_05736":null,"SJAG_06309":null,"SJAG_06588":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bounding membrane of organelle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null,"PMID:32109380":null},"termid":"GO:0098588","terms_by_termid":{"GO:0000136":null,"GO:0000139":null,"GO:0000220":null,"GO:0000221":null,"GO:0000329":null,"GO:0000421":null,"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0001401":null,"GO:0005640":null,"GO:0005741":null,"GO:0005742":null,"GO:0005774":null,"GO:0005778":null,"GO:0005784":null,"GO:0005785":null,"GO:0010008":null,"GO:0010009":null,"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030665":null,"GO:0031207":null,"GO:0031315":null,"GO:0031901":null,"GO:0031902":null,"GO:0032473":null,"GO:0032585":null,"GO:0032865":null,"GO:0033106":null,"GO:0034424":null,"GO:0036266":null,"GO:0070772":null,"GO:0071261":null,"GO:0071986":null,"GO:0097629":null,"GO:0140497":null,"GO:0140595":null,"GO:1902500":null}}


id: GO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid monolayer that surrounds and encloses an organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"}


id: PBO:0050210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 27","termid":"PBO:0050210"}


id: GO:1905198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a manchette.","definition_xrefs":["GO_REF:0000079","PMID:24440897","PMID:22319670","GOC:krc","GOC:TermGenie","PMID:26792866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"manchette assembly","synonyms":[{"name":"manchette formation","type":"exact"}],"termid":"GO:1905198"}


id: PBO:0054822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2235","termid":"PBO:0054822"}


id: GO:0097692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one methyl group to lysine at position 4 of the histone.","definition_xrefs":["PMID:26320581","GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 monomethylation (obsolete GO:0097692)","termid":"GO:0097692"}


id: PBO:0063286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 12","termid":"PBO:0063286"}


id: GO:0016313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The removal of one of the phosphate groups from an inositol triphosphate to produce an inositol bisphosphate.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,5-trisphosphate phosphatase (obsolete GO:0016313)","synonyms":[{"name":"inositol-1,4,5-trisphosphate phosphatase","type":"exact"}],"termid":"GO:0016313"}


id: GO:0048727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior cibarial plate over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior cibarial plate development","termid":"GO:0048727"}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: FYPO:0007414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a subtelomeric region (STE1) adjacent to telomeric repeats is duplicated by homologous recombination.","definition_xrefs":["PMID:31980821","PMID:29392410","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during G0","termid":"FYPO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000293","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"subtelomere expansion during G0","synonyms":[{"name":"subtelomere expansion during quiescence","type":"exact"},{"name":"subtelomere rearrangement during G0","type":"related"},{"name":"STE1 expansion during G0","type":"exact"},{"name":"STEEx during G0","type":"exact"},{"name":"amplification of subtelomeric regions in G0","type":"exact"},{"name":"subtelomere amplification during G0","type":"exact"},{"name":"subtelomere expansion during cell quiescence","type":"exact"},{"name":"subtelomeric region expansion during G0","type":"exact"}],"termid":"FYPO:0007414"}


id: GO:1901178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving spheroidene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"spheroidene metabolic process","synonyms":[{"name":"spheroidene metabolism","type":"exact"}],"termid":"GO:1901178"}


id: PBO:0054925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2339","termid":"PBO:0054925"}


id: GO:2000694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phragmoplast microtubule organization.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"phragmoplast microtubule organization","termid":"GO:0080175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of phragmoplast microtubule organization","synonyms":[{"name":"regulation of phragmoplast microtubule cytoskeleton organization","type":"exact"},{"name":"regulation of phragmoplast microtubule organisation","type":"exact"}],"termid":"GO:2000694"}


id: FYPO:0003377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to nitrosative stress is lower than normal. Total RNA or a specific RNA may be affected. Nitrosative stress often results from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["PMID:20204527","PomBase:mah","GO:0071500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to nitrosative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to nitrosative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to nitrosative stress","type":"exact"},{"name":"reduced RNA level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003377"}


id: GO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of sodium ion transport","synonyms":[{"name":"regulation of Na+ transport","type":"exact"},{"name":"regulation of sodium transport","type":"exact"}],"termid":"GO:0002028"}


id: PBO:0048183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein family member 4","termid":"PBO:0048183"}


id: GO:0071995
data:
  {"annotated_genes":["SJAG_05213","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113305,91669,92634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"}]},"cv_name":"biological_process","definition":"The directed movement of phytochelatins into the vacuole. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"phytochelatin transmembrane transport","termid":"GO:0071994"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phytochelatin import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin import into vacuole","type":"related"},{"name":"phytochelatin transport into vacuole","type":"exact"}],"termid":"GO:0071995","terms_by_termid":{"GO:0036246":null}}


id: PBO:0067327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 418, pseudogene","termid":"PBO:0067327"}


id: PBO:0015664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA replication ligase Cdc17","termid":"PBO:0015664"}


id: MOD:01572
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01572"}


id: PBO:0031036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_lipid_particle_organization","termid":"PBO:0031036"}


id: GO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sevenless receptor activity (obsolete GO:0004927)","synonyms":[{"name":"sevenless receptor activity","type":"exact"}],"termid":"GO:0004927"}


id: PBO:0064208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen activator, urokinase","termid":"PBO:0064208"}


id: GO:0003702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase II transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity (obsolete GO:0003702)","synonyms":[{"name":"RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0003702"}


id: FYPO:0006460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing protein-coding genes during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:19965387","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at protein coding gene during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at protein coding gene during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at protein-coding gene during meiosis I","type":"exact"}],"termid":"FYPO:0006460"}


id: GO:0016629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-en-1-yl}cyclopentyl]octanoate + NADP+ = (15Z)-12-oxophyto-10,15-dienoate + H+ + NADPH.","definition_xrefs":["RHEA:21888","EC:1.3.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"12-oxophytodienoate reductase activity","secondary_identifiers":["KEGG_REACTION:R03401","MetaCyc:12-OXOPHYTODIENOATE-REDUCTASE-RXN"],"synonyms":[{"name":"12-oxo-phytodienoate reductase activity","type":"exact"},{"name":"12-oxo-phytodienoic acid reductase activity","type":"related"},{"name":"8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate:NADP+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0016629"}


id: PBO:0063174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ binding kinase","termid":"PBO:0063174"}


id: PBO:0072538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 68","termid":"PBO:0072538"}


id: SO:1001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"orphan","termid":"SO:0000910"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan_CDS","synonyms":[{"name":"orphan CDS","type":"exact"}],"termid":"SO:1001247"}


id: PBO:0060969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor Y subunit alpha pseudogene 1","termid":"PBO:0060969"}


id: GO:0052010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host cell wall cellulose (obsolete GO:0052010)","synonyms":[{"name":"catabolism by organism of host cell wall cellulose","type":"exact"}],"termid":"GO:0052010"}


id: PBO:0077332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 69","termid":"PBO:0077332"}


id: PBO:0054909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2323","termid":"PBO:0054909"}


id: FYPO:0005138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:15238514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"},{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic recombination double-strand break repair","synonyms":[{"name":"normal DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"normal double-strand break repair during meiotic recombination","type":"exact"},{"name":"normal double-strand break repair involved in reciprocal meiotic recombination","type":"exact"}],"termid":"FYPO:0005138"}


id: GO:0016708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and two atoms of oxygen are incorporated into one donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","secondary_identifiers":["EC:1.14.12.-"],"synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor","type":"related"}],"termid":"GO:0016708"}


id: PBO:0069101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 348, pseudogene","termid":"PBO:0069101"}


id: GO:0030582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a reproductive fruiting body over time, from its formation to the mature structure. A reproductive fruiting body is a multicellular reproductive structure that contains spores.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive fruiting body development","synonyms":[{"name":"fruiting body formation","type":"exact"}],"termid":"GO:0030582"}


id: GO:0030295
data:
  {"annotated_genes":["SJAG_02057","SJAG_01213","SJAG_03936","SJAG_03340","SJAG_02232","SJAG_04502","SJAG_03453","SJAG_03090","SJAG_02605","SJAG_04509","SJAG_01411","SJAG_04020","SJAG_04614","SJAG_02026","SJAG_01605","SJAG_03618","SJAG_00333","SJAG_03695","SJAG_04200","SJAG_05017","SJAG_02785","SJAG_02332","SJAG_01401","SJAG_00142","SJAG_00457","SJAG_03371","SJAG_03699","SJAG_00439","SJAG_00318","SJAG_04140","SJAG_00236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70431,70639,72175,72759,77301,84972,86984,94733,102528,106720,107749,111510],"is_not":false,"summary":null,"term":"GO:0030295"},{"annotations":[112232,78438,70627,108226,106491,73775,107364,97129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[105858,113465,74966,83708,95498,84987,86557,104610,74751,100535,86870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activator activity","termid":"GO:0019209"},{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677","GO:0030234"],"is_obsolete":false,"name":"protein kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0030295","terms_by_termid":{"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: GO:0102705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + L-serine = ethanolaminium(1+) + carbon dioxide.","definition_xrefs":["RHEA:45824","GOC:pz","PMID:11461929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"serine decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-5641"],"termid":"GO:0102705"}


id: PBO:0039639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 2, pseudogene","termid":"PBO:0039639"}


id: PBO:0076368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 5","termid":"PBO:0076368"}


id: SO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TAA.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre_stop_codon","synonyms":[{"name":"Ochre stop codon","type":"exact"}],"termid":"SO:0002334"}


id: PBO:0063088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 6","termid":"PBO:0063088"}


id: GO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein as part of a process of ubiquitin-dependent protein catabolism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein deubiquitination involved in ubiquitin-dependent protein catabolic process","termid":"GO:0071947"}


id: PBO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 52","termid":"PBO:0071050"}


id: GO:0031856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a parathyroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"parathyroid hormone receptor binding","synonyms":[{"name":"parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031856"}


id: GO:1900443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"}


id: GO:0008009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["PMID:12183377","Wikipedia:Chemokine","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine activity","termid":"GO:0005125"},{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0005488","GO:0005515","GO:0098772"],"is_obsolete":false,"name":"chemokine activity","termid":"GO:0008009"}


id: GO:0004333
data:
  {"annotated_genes":["SJAG_04843"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78020],"is_not":false,"summary":null,"term":"GO:0004333"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate = fumarate + H2O.","definition_xrefs":["RHEA:12460","EC:4.2.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"fumarate hydratase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R01082","MetaCyc:FUMHYDR-RXN","Reactome:R-HSA-451033","Reactome:R-HSA-70982"],"synonyms":[{"name":"(S)-malate hydro-lyase (fumarate-forming)","type":"related"},{"name":"(S)-malate hydro-lyase activity","type":"related"},{"name":"L-malate hydro-lyase activity","type":"related"},{"name":"fumarase activity","type":"related"}],"termid":"GO:0004333","terms_by_termid":{"GO:0004333":null}}


id: PR:O42643
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DHX8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.02c","secondary_identifiers":["UniProtKB:O42643"],"synonyms":[{"name":"Spom972h-DHX8","type":"exact"}],"termid":"PR:O42643"}


id: GO:0070445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070445"}


id: PR:Q10286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proton myo-inositol cotransporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.15","secondary_identifiers":["UniProtKB:Q10286"],"synonyms":[{"name":"SPAC4F8.15","type":"related"},{"name":"Spom972h-SLC2A13","type":"exact"}],"termid":"PR:Q10286"}


id: PBO:0087097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal large subunit (60S) assembly factor; association of the N-terminal ubiquitin-like (UBL) domain of this preribosomal factor with the MIDAS domain in the Rea1p tail, promoted by the GTPase Nog2p, is required for the ATP-dependent dissociation of preribosomal factors including the Rix1p subcomplex, Rea1p, Nog2p and Rsa1p itself prior to nuclear export of pre-60S particles; contains WD-repeats and a UBL domain; localizes to the nucleolus","termid":"PBO:0087097"}


id: GO:0044128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases its size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont in host (obsolete GO:0044128)","termid":"GO:0044128"}


id: SO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that occurs in nature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural","termid":"SO:0000782"}


id: GO:0052440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052440)","synonyms":[{"name":"modulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052440"}


id: GO:0046604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centrosome separation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic centrosome separation","termid":"GO:0046602"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic centrosome separation","synonyms":[{"name":"activation of mitotic centrosome separation","type":"narrow"},{"name":"stimulation of mitotic centrosome separation","type":"narrow"},{"name":"up regulation of mitotic centrosome separation","type":"exact"},{"name":"up-regulation of mitotic centrosome separation","type":"exact"},{"name":"upregulation of mitotic centrosome separation","type":"exact"}],"termid":"GO:0046604"}


id: PBO:0090311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex WD repeat protein subunit Mms1","termid":"PBO:0090311"}


id: FYPO:0002679
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114585,114589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta"],"synonyms":[{"name":"reduced protein phosphorylation","type":"exact"}],"termid":"FYPO:0002679","terms_by_termid":{"FYPO:0001838":null}}


id: PBO:0039052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 1","termid":"PBO:0039052"}


id: FYPO:0007989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion does not occur because the nuclei fail to come in physical contact.","definition_xrefs":["PomBase:mlr","PMID:25869666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear congression during mating","termid":"FYPO:0003062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear congression during mating","termid":"FYPO:0007989"}


id: GO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005515","GO:0098772","GO:0140677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chemoattractant activity","synonyms":[{"name":"attractant","type":"broad"}],"termid":"GO:0042056"}


id: FYPO:0003065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the microtubule cytoskeleton is abnormal during conjugation with cellular fusion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during mating","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during conjugation with cellular fusion","type":"exact"},{"name":"abnormal microtubule cytoskeleton morphology during karyogamy","type":"related"}],"termid":"FYPO:0003065"}


id: GO:0034992
data:
  {"annotated_genes":["SJAG_01242","SJAG_03491","SJAG_04489","SJAG_03783","SJAG_05303","SJAG_05207","SJAG_05196","SJAG_01538","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70944],"is_not":false,"summary":null,"term":"GO:0034992"},{"annotations":[108095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034993"},{"annotations":[99175,83749,93523,109929,96392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180028"},{"annotations":[98279,92301],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A region of the nuclear envelope to which a microtubule organizing center (MTOC) attaches; protein complexes embedded in the nuclear envelope mediate direct or indirect linkages between the microtubule cytoskeleton and the nuclear envelope.","definition_xrefs":["PMID:18692466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01538":null,"SJAG_03491":null,"SJAG_03783":null,"SJAG_04489":null,"SJAG_04558":null,"SJAG_05196":null,"SJAG_05207":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"microtubule organizing center attachment site","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"MAS","type":"exact"},{"name":"MTOC attachment site","type":"exact"},{"name":"microtubule organising centre attachment site","type":"exact"}],"termid":"GO:0034992","terms_by_termid":{"GO:0034992":null,"GO:0034993":null,"GO:0180028":null,"GO:1990612":null}}


id: SO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequences within the intron that modulate splice site selection for some introns.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_enhancer","termid":"SO:0000344"},{"relation_name":"part_of","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splice_enhancer","synonyms":[{"name":"intronic splice enhancer","type":"exact"}],"termid":"SO:0000320"}


id: SO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region within the central region of a modular centromere, where the kinetochore is formed.","definition_xrefs":["SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"regional_centromere","termid":"SO:0001795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_central_core","synonyms":[{"name":"regional centromere central core","type":"exact"}],"termid":"SO:0001796"}


id: PBO:0040284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 4","termid":"PBO:0040284"}


id: GO:0052097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms of different species monitors population density by detecting the concentration of small diffusible signal molecules.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interspecies quorum sensing (obsolete GO:0052097)","termid":"GO:0052097"}


id: PBO:0086581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant is fluconazole resistant and has long chronological lifespan","termid":"PBO:0086581"}


id: PBO:0003150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type","termid":"PBO:0003150"}


id: FYPO:0007240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) differs between the two daughter cells formed as a result of cell division. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PomBase:mah","PMID:31719163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0005568","FYPO:0001985"],"is_obsolete":false,"name":"abnormal NETO in daughter cells","synonyms":[{"name":"abnormal NETO in daughter cells during mitotic cell cycle","type":"related"},{"name":"abnormal NETO in daughter cells during vegetative growth","type":"exact"},{"name":"abnormal activation of bipolar cell growth in daughter cells","type":"related"},{"name":"abnormal cell growth mode switching, monopolar to bipolar, in daughter cells","type":"exact"},{"name":"abnormal new end take-off in daughter cells","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth in daughter cells","type":"exact"}],"termid":"FYPO:0007240"}


id: PBO:0030832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_iron_starvation","termid":"PBO:0030832"}


id: PBO:0062255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 2 pseudogene","termid":"PBO:0062255"}


id: PBO:0083718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein with chaperone and co-chaperone activity; involved in retention of resident ER proteins; has a role in recognizing proteins targeted for ER-associated degradation (ERAD), member of the protein disulfide isomerase family","termid":"PBO:0083718"}


id: PBO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E2","termid":"PBO:0075521"}


id: GO:0033857
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71249],"is_not":false,"summary":null,"term":"GO:0033857"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 5-diphosphate pentakisphosphate = ADP + 1D-myo-inositol bisdiphosphate tetrakisphosphate.","definition_xrefs":["EC:2.7.4.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"diphosphoinositol-pentakisphosphate kinase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0102092","MetaCyc:2.7.4.24-RXN"],"synonyms":[{"name":"5-diphosphoinositol pentakisphosphate 3-kinase activity","type":"exact"},{"name":"PP-IP5 kinase activity","type":"related"},{"name":"PP-InsP5 kinase activity","type":"related"},{"name":"PPIP5K","type":"related"}],"termid":"GO:0033857","terms_by_termid":{"GO:0033857":null}}


id: GO:0018302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018302"}


id: GO:0047208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxycoumarin + UDP-D-glucose = daphnin + H+ + UDP.","definition_xrefs":["RHEA:14325","EC:2.4.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"o-dihydroxycoumarin 7-O-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03548","MetaCyc:2.4.1.104-RXN"],"synonyms":[{"name":"UDP-glucose:7,8-dihydroxycoumarin 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:o-dihydroxycoumarin glucosyltransferase activity","type":"related"},{"name":"UDPglucose:7,8-dihydroxycoumarin 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-o-dihydroxycoumarin 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047208"}


id: FYPO:0006830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to replete levels of zinc ion is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:29529046","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to replete zinc","synonyms":[{"name":"normal RNA accumulation during cellular response to replete zinc","type":"related"},{"name":"normal RNA level during cellular response to replete zinc during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to replete zinc during vegetative growth","type":"exact"},{"name":"normal RNA level during replete zinc","type":"exact"},{"name":"normal RNA level in response to replete zinc","type":"exact"},{"name":"normal mRNA level during cellular response to replete zinc","type":"narrow"},{"name":"normal transcript level during cellular response to replete zinc","type":"exact"}],"termid":"FYPO:0006830"}


id: PBO:0064432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 10 pseudogene","termid":"PBO:0064432"}


id: GO:0045611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"negatively_regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemocyte differentiation","synonyms":[{"name":"down regulation of hemocyte differentiation","type":"exact"},{"name":"down-regulation of hemocyte differentiation","type":"exact"},{"name":"downregulation of hemocyte differentiation","type":"exact"},{"name":"inhibition of hemocyte differentiation","type":"narrow"},{"name":"negative regulation of arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0045611"}


id: PBO:0039027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3","termid":"PBO:0039027"}


id: PBO:0073319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 2","termid":"PBO:0073319"}


id: PBO:0080784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 4","termid":"PBO:0080784"}


id: PBO:0080060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 30","termid":"PBO:0080060"}


id: GO:0140678
data:
  {"annotated_genes":["SJAG_02470","SJAG_04546","SJAG_04999","SJAG_03629","SJAG_04505","SJAG_01072","SJAG_01118","SJAG_01867","SJAG_01245","SJAG_01821","SJAG_04633","SJAG_03717","SJAG_00460","SJAG_02594","SJAG_01515","SJAG_04422","SJAG_04627","SJAG_03309","SJAG_04203","SJAG_01348","SJAG_03272","SJAG_01210","SJAG_04699","SJAG_03931","SJAG_02786","SJAG_02380","SJAG_02874","SJAG_00452","SJAG_04398","SJAG_02485","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87532],"is_not":false,"summary":null,"term":"GO:0140678"},{"annotations":[96011,113058,113121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042030"},{"annotations":[71052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[104245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[85161,98726,112001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[104582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004857"},{"annotations":[111496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[87848,92809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990624"},{"annotations":[106461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"},{"annotations":[95481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030414"},{"annotations":[102406,110519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[70391,85132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[103765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"},{"annotations":[75277,74289,83657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[84599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008428"},{"annotations":[91094,92663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990846"},{"annotations":[88822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"},{"annotations":[76005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010521"},{"annotations":[94245,110744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"},{"annotations":[109854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055105"}]},"cv_name":"molecular_function","definition":"A molecular function regulator that inhibits or decreases the activity of its target via non-covalent binding that does not result in covalent modification to the target.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00460":null,"SJAG_01072":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01348":null,"SJAG_01515":null,"SJAG_01821":null,"SJAG_01867":null,"SJAG_02194":null,"SJAG_02380":null,"SJAG_02470":null,"SJAG_02485":null,"SJAG_02594":null,"SJAG_02786":null,"SJAG_02874":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03629":null,"SJAG_03717":null,"SJAG_03931":null,"SJAG_04203":null,"SJAG_04398":null,"SJAG_04422":null,"SJAG_04505":null,"SJAG_04546":null,"SJAG_04627":null,"SJAG_04633":null,"SJAG_04699":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"molecular function inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0140678","terms_by_termid":{"GO:0004857":null,"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0004864":null,"GO:0004865":null,"GO:0004866":null,"GO:0004867":null,"GO:0005095":null,"GO:0008073":null,"GO:0008428":null,"GO:0010521":null,"GO:0030291":null,"GO:0030414":null,"GO:0042030":null,"GO:0055105":null,"GO:0140678":null,"GO:1990624":null,"GO:1990846":null,"GO:1990948":null}}


id: PBO:0090332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2","termid":"PBO:0090332"}


id: SO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable_element that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"transposable_element_gene","termid":"SO:0000111"},{"relation_name":"is_a","term_name":"engineered_foreign_gene","termid":"SO:0000281"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_transposable_element_gene","synonyms":[{"name":"engineered foreign transposable element gene","type":"exact"}],"termid":"SO:0000283"}


id: PBO:0072963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin V","termid":"PBO:0072963"}


id: GO:1905787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8692859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905787"}


id: GO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Intervening protein sequence excised from a protein precursor in protein splicing; inteins catalyze their own excision and many also possess endonuclease activity.","definition_xrefs":["GOC:mah","PMID:8165123"],"gene_count":0,"genotype_count":0,"name":"obsolete intein (obsolete GO:0016541)","synonyms":[{"name":"intein","type":"exact"}],"termid":"GO:0016541"}


id: GO:0032824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"negatively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell differentiation","synonyms":[{"name":"down regulation of natural killer cell differentiation","type":"exact"},{"name":"down-regulation of natural killer cell differentiation","type":"exact"},{"name":"downregulation of natural killer cell differentiation","type":"exact"},{"name":"inhibition of natural killer cell differentiation","type":"narrow"},{"name":"negative regulation of NK cell differentiation","type":"exact"},{"name":"negative regulation of natural killer cell development","type":"related"}],"termid":"GO:0032824"}


id: GO:2001291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving codeine, an alkaloid found in the opium poppy, Papaver somniferum var. album. Codeine has analgesic, anti-tussive and anti-diarrhoeal properties.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound metabolic process","termid":"GO:1901376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"codeine metabolic process","synonyms":[{"name":"codeine metabolism","type":"exact"}],"termid":"GO:2001291"}


id: PBO:0077087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 2","termid":"PBO:0077087"}


id: PBO:0039789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-Raf proto-oncogene, serine/threonine kinase","termid":"PBO:0039789"}


id: GO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"},{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to telomere","synonyms":[{"name":"establishment of protein localisation to telomere","type":"exact"},{"name":"establishment of protein localization to chromosome, telomeric region","type":"exact"}],"termid":"GO:0070200"}


id: GO:0140931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral L-amino acid(out) + Na+(out) + Cl-(out) = neutral L-amino acid(in) + Na+(in)+ Cl-(in).","definition_xrefs":["PMID:19478081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"neutral L-amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral amino acid:sodium:chloride symporter activity","type":"exact"}],"termid":"GO:0140931"}


id: PBO:0018007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Spc24","termid":"PBO:0018007"}


id: PBO:0091676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1773 family protein","termid":"PBO:0091676"}


id: GO:0075250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"negatively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aeciospore formation","termid":"GO:0075250"}


id: GO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + linoleate = (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"linoleate 8R-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R07061","MetaCyc:RXN-12756","EC:1.13.11.60"],"synonyms":[{"name":"5,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"5,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"7,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"7,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052878"}


id: PR:Q9Y814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- htd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-thioester dehydratase type 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.15c","synonyms":[{"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-htd2","type":"exact"}],"termid":"PR:Q9Y814"}


id: GO:0009982
data:
  {"annotated_genes":["SJAG_04065","SJAG_03572","SJAG_04754","SJAG_01054","SJAG_00319","SJAG_01172","SJAG_02978","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72712,74954,77352,78837,112323],"is_not":false,"summary":null,"term":"GO:0009982"},{"annotations":[109536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106032"},{"annotations":[101639,97963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106029"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in RNA = a pseudouridine in RNA. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["RHEA:48348","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01054":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0016439","Reactome:R-HSA-6782381","Reactome:R-HSA-6787566","Reactome:R-HSA-8870289","Reactome:R-HSA-6786583","Reactome:R-HSA-6790905"],"termid":"GO:0009982","terms_by_termid":{"GO:0009982":null,"GO:0106029":null,"GO:0106032":null}}


id: GO:0007300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transfer of constituents synthesized in the ovarian nurse cells to the oocyte, through the ring canals, as the egg chamber is growing. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ovarian nurse cell to oocyte transport","synonyms":[{"name":"nurse cell to oocyte transport","type":"broad"}],"termid":"GO:0007300"}


id: PBO:0039786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12B","termid":"PBO:0039786"}


id: PBO:0026767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_catalase_activity","termid":"PBO:0026767"}


id: PBO:0017885
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae FPR1","termid":"PBO:0017885"}


id: GO:0051912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme B + coenzyme M + methanophenazine = N-{7-[(2-sulfoethyl)dithio]heptanoyl}-3-O-phospho-L-threonine + dihydromethanophenazine.","definition_xrefs":["RHEA:18085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"CoB--CoM heterodisulfide reductase activity","secondary_identifiers":["EC:1.8.98.1","MetaCyc:1.8.98.1-RXN"],"synonyms":[{"name":"CoB-CoM heterodisulfide reductase activity","type":"exact"},{"name":"coenzyme B--coenzyme M heterodisulfide reductase activity","type":"exact"},{"name":"coenzyme B:coenzyme M:methanophenazine oxidoreductase activity","type":"related"},{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity","type":"related"},{"name":"heterodisulfide reductase activity","type":"broad"},{"name":"soluble heterodisulfide reductase activity","type":"related"}],"termid":"GO:0051912"}


id: PBO:0028682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope,_with_spindle_pole_body_in_cytoplasm","termid":"PBO:0028682"}


id: FYPO:0001913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ubiquitin ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abolished ubiquitin ligase activity","synonyms":[{"name":"abolished ubiquitin-protein ligase activity","type":"exact"},{"name":"ubiquitin ligase activity abolished","type":"exact"}],"termid":"FYPO:0001913"}


id: PBO:0054002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1327","termid":"PBO:0054002"}


id: FYPO:0005349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body (SPB) moves rapidly back and forth to a greater extent and over a larger area than normal, causing increased chromosome movement. Normally, SPB oscillation occurs during mitotic interphase (as well as prophase) but is restricted to a small space.","definition_xrefs":["PMID:19001497","PMID:12390246","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"increased SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"increased mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"increased mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"increased mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005349"}


id: internal:consider
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consider","termid":"internal:consider"}


id: GO:1990208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the RNA levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12182338","PMID:18703740"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of RNA levels in host (obsolete GO:1990208)","termid":"GO:1990208"}


id: PBO:0084578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR075W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR074W","termid":"PBO:0084578"}


id: GO:1902936
data:
  {"annotated_genes":["SJAG_02572","SJAG_01143","SJAG_01748","SJAG_02657","SJAG_00118","SJAG_04960","SJAG_02177","SJAG_00115","SJAG_00724","SJAG_04644","SJAG_02166","SJAG_00368","SJAG_00152","SJAG_05179","SJAG_04963","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71860,78565,73384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[73415,85356,97260,83787,97406,101997,94861,113595,110107,112200,86458,114049,94829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol bisphosphate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000067","PMID:18690034","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00368":null,"SJAG_00724":null,"SJAG_01143":null,"SJAG_01748":null,"SJAG_01783":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02572":null,"SJAG_02657":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"phosphatidylinositol bisphosphate binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:1902936","terms_by_termid":{"GO:0005546":null,"GO:0080025":null}}


id: GO:0021935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The early migration of granule cell precursors in which cells move orthogonal to the direction of radial migration and ultimately cover the superficial zone of the cerebellar primordium.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","PMID:15157725","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain tangential cell migration","termid":"GO:0021934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell precursor tangential migration","termid":"GO:0021935"}


id: PR:P0CT62
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps3001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.04","synonyms":[{"name":"Spom972h-rps3001","type":"exact"}],"termid":"PR:P0CT62"}


id: PBO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 1","termid":"PBO:0005412"}


id: PBO:0039927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF28 pseudogene 1","termid":"PBO:0039927"}


id: PBO:0031662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_modification_during_vegetative_growth","termid":"PBO:0031662"}


id: PBO:0050942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 13","termid":"PBO:0050942"}


id: GO:1904700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a granulosa cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000085","PMID:19208546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell apoptotic process","synonyms":[{"name":"granulosa cell apoptosis","type":"narrow"},{"name":"granulosa cell of ovary apoptosis","type":"narrow"},{"name":"granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904700"}


id: PATO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a slanting direction or position : neither perpendicular nor parallel.","definition_xrefs":["merriam-wester:http://www.merriam-webster.com/dictionary/oblique"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique orientation","termid":"PATO:0002481"}


id: PBO:0064071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 105","termid":"PBO:0064071"}


id: SO:0001296
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methyladenosine","secondary_identifiers":["RNAMOD:002"],"synonyms":[{"name":"2-methyladenosine","type":"exact"},{"name":"m2A","type":"exact"},{"name":"two methyladenosine","type":"exact"}],"termid":"SO:0001296"}


id: GO:0075257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or overwintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of teliospore formation","termid":"GO:0075256"},{"relation_name":"positively_regulates","term_name":"teliospore formation","termid":"GO:0075255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of teliospore formation","termid":"GO:0075257"}


id: PBO:0084425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major mitochondrial nuclease; has RNAse and DNA endo- and exonucleolytic activities; roles in mitochondrial recombination, apoptosis and maintenance of polyploidy; involved in fragmentation of genomic DNA during PND (programmed nuclear destruction); encodes ortholog of mammalian endoG","termid":"PBO:0084425"}


id: PBO:0055144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2563","termid":"PBO:0055144"}


id: PBO:0090021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex subunit Naa35","termid":"PBO:0090021"}


id: GO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular fraction (obsolete GO:0042598)","synonyms":[{"name":"vesicular fraction","type":"exact"}],"termid":"GO:0042598"}


id: GO:0010021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amylopectin, the (1->4) linked alpha glucose units with alpha-(1->6) linkages.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin biosynthetic process","synonyms":[{"name":"amylopectin anabolism","type":"exact"},{"name":"amylopectin biosynthesis","type":"exact"},{"name":"amylopectin formation","type":"exact"},{"name":"amylopectin synthesis","type":"exact"}],"termid":"GO:0010021"}


id: PBO:0030451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_lysine_and_methionine","termid":"PBO:0030451"}


id: GO:0061990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octanoyl-CoA + a malonyl-[acyl-carrier protein] = a 3-oxodecanoyl-[acyl-carrier protein] + CoA + CO2.","definition_xrefs":["EC:2.3.1.207","PMID:22753057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoyltransferase activity","termid":"GO:0016415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"beta-ketodecanoyl-[acyl-carrier-protein] synthase activity","secondary_identifiers":["MetaCyc:RXN-13613","RHEA:42264"],"termid":"GO:0061990"}


id: PBO:0065911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGAP1L antisense RNA 1","termid":"PBO:0065911"}


id: PBO:0075899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression of tumorigenicity 7 like","termid":"PBO:0075899"}


id: GO:0008483
data:
  {"annotated_genes":["SJAG_03434","SJAG_03641","SJAG_04145","SJAG_01019","SJAG_00495","SJAG_03856","SJAG_03055","SJAG_04149","SJAG_02791","SJAG_04988","SJAG_00714","SJAG_03306","SJAG_03961","SJAG_04678","SJAG_02901","SJAG_02408","SJAG_00673","SJAG_04728","SJAG_00691","SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57973,67626,91380,91994,108287],"is_not":false,"summary":null,"term":"GO:0008483"},{"annotations":[94918,72440,75766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047536"},{"annotations":[72868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046820"},{"annotations":[87376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034386"},{"annotations":[75388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004015"},{"annotations":[77091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004360"},{"annotations":[97781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004400"},{"annotations":[73280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016212"},{"annotations":[78071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004021"},{"annotations":[76600,71165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004069"},{"annotations":[105750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052656"},{"annotations":[105751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052654"},{"annotations":[105752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050048"},{"annotations":[93907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080130"},{"annotations":[105753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052655"},{"annotations":[113487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003992"},{"annotations":[78300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004648"},{"annotations":[77274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004587"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00714":null,"SJAG_01019":null,"SJAG_02408":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_03055":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03856":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04678":null,"SJAG_04728":null,"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"transaminase activity","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:2.6.1.-","Reactome:R-HSA-1237102"],"synonyms":[{"name":"aminotransferase activity","type":"exact"}],"termid":"GO:0008483","terms_by_termid":{"GO:0003992":null,"GO:0004015":null,"GO:0004021":null,"GO:0004069":null,"GO:0004360":null,"GO:0004400":null,"GO:0004587":null,"GO:0004648":null,"GO:0008483":null,"GO:0016212":null,"GO:0034386":null,"GO:0046820":null,"GO:0047536":null,"GO:0050048":null,"GO:0052654":null,"GO:0052655":null,"GO:0052656":null,"GO:0080130":null}}


id: FYPO:0007631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 12 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007631"}


id: GO:1903511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orotic acid.","definition_xrefs":["PMID:10727948","GO_REF:0000068","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"orotic acid metabolic process","synonyms":[{"name":"orotic acid metabolism","type":"exact"}],"termid":"GO:1903511"}


id: PBO:0063658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 3, pseudogene","termid":"PBO:0063658"}


id: GO:1904100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein O-linked glycosylation.","definition_xrefs":["PMID:24509081","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein glycosylation","termid":"GO:0060050"},{"relation_name":"is_a","term_name":"regulation of protein O-linked glycosylation","termid":"GO:1904098"},{"relation_name":"positively_regulates","term_name":"protein O-linked glycosylation","termid":"GO:0006493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006486"},{"rel_name":"positively_regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein O-linked glycosylation","synonyms":[{"name":"activation of protein O-linked glycosylation","type":"narrow"},{"name":"activation of protein amino acid O-linked glycosylation","type":"narrow"},{"name":"positive regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"up regulation of protein O-linked glycosylation","type":"exact"},{"name":"up regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"up-regulation of protein O-linked glycosylation","type":"exact"},{"name":"up-regulation of protein amino acid O-linked glycosylation","type":"exact"},{"name":"upregulation of protein O-linked glycosylation","type":"exact"},{"name":"upregulation of protein amino acid O-linked glycosylation","type":"exact"}],"termid":"GO:1904100"}


id: PBO:0080001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase10 pseudogene 2","termid":"PBO:0080001"}


id: PBO:0075673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase small subunit A","termid":"PBO:0075673"}


id: PBO:0077465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185A pseudogene 1","termid":"PBO:0077465"}


id: GO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on tricoumaroyl spermidine or any of its mono- or dicaffeoyl spermidine derivatives.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}


id: GO:0004828
data:
  {"annotated_genes":["SJAG_02977","SJAG_04762"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72872,75914],"is_not":false,"summary":null,"term":"GO:0004828"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-serine + tRNA(Ser) = AMP + diphosphate + L-seryl-tRNA(Ser).","definition_xrefs":["EC:6.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02977":null,"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0003824","GO:0140098","GO:0016874"],"is_obsolete":false,"name":"serine-tRNA ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:SERINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379992","RHEA:12292","Reactome:R-HSA-380239"],"synonyms":[{"name":"L-serine:tRNASer ligase (AMP-forming)","type":"related"},{"name":"SerRS activity","type":"related"},{"name":"serine translase activity","type":"related"},{"name":"seryl-tRNA synthetase activity","type":"exact"},{"name":"seryl-transfer RNA synthetase activity","type":"related"},{"name":"seryl-transfer ribonucleate synthetase activity","type":"related"},{"name":"seryl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004828","terms_by_termid":{"GO:0004828":null}}


id: PBO:0039298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG12 alpha-1,6-mannosyltransferase","termid":"PBO:0039298"}


id: PBO:0080120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAC14 component of PIKFYVE complex","termid":"PBO:0080120"}


id: PBO:0081132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 divergent transcript","termid":"PBO:0081132"}


id: MOD:01871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an S-carboxamidomethyl-L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid with the loss of ammonia.","definition_xrefs":["DeltaMass:336","Unimod:26","PubMed:12643538"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","termid":"MOD:00419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized N-terminal S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"related"}],"termid":"MOD:01871"}


id: PBO:0053165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDOC1 regulator of NFKB signaling","termid":"PBO:0053165"}


id: PBO:0072792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 2","termid":"PBO:0072792"}


id: PATO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000653 addictive substance value (obsolete PATO:0000653)","termid":"PATO:0000653"}


id: PBO:0046376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTR1 pseudogene 2","termid":"PBO:0046376"}


id: PBO:0026666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_cell","termid":"PBO:0026666"}


id: FYPO:0008004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a site of mechanical stress on the cell surface where it is normally found.","definition_xrefs":["PomBase:mlr","PMID:34666001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to site of mechanical stress","termid":"FYPO:0008004"}


id: PBO:0054793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2207","termid":"PBO:0054793"}


id: PBO:0075294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 33","termid":"PBO:0075294"}


id: PBO:0074749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 108","termid":"PBO:0074749"}


id: PBO:0085870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; highly induced in zinc-depleted conditions and has increased expression in NAP1 deletion mutants; VEL1 has a paralog, YOR387C, that arose from a single-locus duplication","termid":"PBO:0085870"}


id: GO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont involved in interaction with host (obsolete GO:0044148)","synonyms":[{"name":"positive regulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044148"}


id: FYPO:0000557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of re-entry into the mitotic cell cycle after pheromone arrest is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal re-entry into mitotic cell cycle after pheromone arrest","termid":"FYPO:0000555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"decreased re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"decreased recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: decreased","type":"related"},{"name":"reduced re-entry into mitotic cell cycle after pheromone arrest","type":"exact"}],"termid":"FYPO:0000557"}


id: PBO:0053216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 13","termid":"PBO:0053216"}


id: FYPO:0000616
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114669,114671,114670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through mitotic anaphase is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic anaphase progression","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_03575","SJAG_01956"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal anaphase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic anaphase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in anaphase","type":"exact"},{"name":"mitotic cell cycle progression in anaphase: abnormal","type":"related"}],"termid":"FYPO:0000616","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0081958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZP3 pseudogene 2","termid":"PBO:0081958"}


id: PBO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli rusA and ruvC","termid":"PBO:0017769"}


id: FYPO:0002515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated, branched germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with branched, elongated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, branched, elongated cell","type":"exact"},{"name":"inviable following spore germination with elongated, branched germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, branched germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with branched, elongated germ tube","type":"exact"}],"termid":"FYPO:0002515"}


id: MOD:01065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and a protein N-terminal amino group to form a Schiff-base or an Amadori ketosamine  (or aminoketose) residue adduct.","definition_xrefs":["DeltaMass:0","Unimod:41#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycated residue","termid":"MOD:00767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose glycated N-terminal","termid":"MOD:01065"}


id: SO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that is bound by a nucleic acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bound_by_factor","termid":"SO:0000277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bound_by_nucleic_acid","synonyms":[{"name":"bound by nucleic acid","type":"exact"}],"termid":"SO:0000876"}


id: GO:0016227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + 'activated' tRNA = L-serine + tRNA containing a thionucleotide.","definition_xrefs":["EC:2.8.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA sulfurtransferase activity (obsolete GO:0016227)","synonyms":[{"name":"L-cysteine:tRNA sulfurtransferase activity","type":"related"},{"name":"RNA sulfurtransferase activity","type":"related"},{"name":"ribonucleate sulfurtransferase activity","type":"related"},{"name":"tRNA sulfurtransferase activity","type":"exact"},{"name":"tRNA sulphurtransferase activity","type":"exact"},{"name":"transfer RNA sulfurtransferase activity","type":"related"},{"name":"transfer RNA thiolase activity","type":"related"},{"name":"transfer ribonucleate sulfurtransferase activity","type":"related"}],"termid":"GO:0016227"}


id: SOFP:protein_id
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A protein sequence identifier","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_id","termid":"SOFP:protein_id"}


id: GO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of juvenile hormone metabolic process","synonyms":[{"name":"down regulation of juvenile hormone metabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone metabolic process","type":"exact"},{"name":"downregulation of juvenile hormone metabolic process","type":"exact"},{"name":"inhibition of juvenile hormone metabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0045928"}


id: PBO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by UV","termid":"PBO:0000946"}


id: GO:0097418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracellular mass of paired, helically wound protein filaments (also called PHF) lying in the cytoplasm of neuronal cell bodies and neuritic cell processes. Neurofibrillary tangles contain an abnormally phosphorylated form of a microtubule-associated protein, tau. The shape of these inclusions may resemble a flame or a star.","definition_xrefs":["NIF_Subcellular:sao2409833926","NIF_Subcellular:nlx_subcell_20090202","NIF_Subcellular:nlx_subcell_20090201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neurofibrillary tangle","synonyms":[{"name":"flame-shaped neurofibrillary tangle","type":"narrow"},{"name":"star-shaped neurofibrillary tangle","type":"narrow"}],"termid":"GO:0097418"}


id: PBO:0036410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase Nit1 (predicted)","termid":"PBO:0036410"}


id: GO:0042725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine (vitamin B1), and compounds derived from it.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0006790","GO:0044248"],"is_obsolete":false,"name":"thiamine-containing compound catabolic process","synonyms":[{"name":"thiamin and derivative catabolic process","type":"exact"},{"name":"thiamin and derivative catabolism","type":"exact"},{"name":"thiamin-containing compound catabolic process","type":"exact"},{"name":"thiamine and derivative catabolic process","type":"exact"},{"name":"thiamine and derivative catabolism","type":"exact"},{"name":"thiamine-containing compound breakdown","type":"exact"},{"name":"thiamine-containing compound catabolism","type":"exact"},{"name":"thiamine-containing compound degradation","type":"exact"},{"name":"vitamin B1 and derivative catabolic process","type":"exact"},{"name":"vitamin B1 and derivative catabolism","type":"exact"}],"termid":"GO:0042725"}


id: GO:0019622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"3-(3-hydroxy)phenylpropionate metabolic process","termid":"GO:0046435"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(3-hydroxy)phenylpropionate catabolic process","secondary_identifiers":["MetaCyc:HCAMHPDEG-PWY"],"synonyms":[{"name":"3-(3-hydroxy)phenylpropionate breakdown","type":"exact"},{"name":"3-(3-hydroxy)phenylpropionate catabolism","type":"exact"},{"name":"3-(3-hydroxy)phenylpropionate degradation","type":"exact"}],"termid":"GO:0019622"}


