# terms

id: PATO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being split asymmetrically on one side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split","termid":"PATO:0001786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split laterally","termid":"PATO:0002170"}


id: GO:0031478
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a dimer of class VIII myosin heavy chains and associated light chains. Myosin VIII is predicted to be dimeric, and contain an unusual 100-190 residue N-terminal extension prior to their motor domains, 3-4 IQ motifs, a short region (~70 residues) of predicted alpha-helical coiled coil and a C-terminal domain.","direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"myosin VIII complex","termid":"GO:0031478"}


id: PBO:0062652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 2","termid":"PBO:0062652"}


id: PBO:0085924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; expression induced by low temperature and also by anaerobic conditions; induced during alcoholic fermentation","termid":"PBO:0085924"}


id: PBO:0110170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110170"}


id: GO:0040032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the post-embryonic soma are generated and organized.","definition_xrefs":["ISBN:0140512888","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"body morphogenesis","termid":"GO:0010171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic body morphogenesis","termid":"GO:0040032"}


id: PBO:0003216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12 (predicted)","termid":"PBO:0003216"}


id: PR:P32390
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.03","secondary_identifiers":["UniProtKB:P32390"],"synonyms":[{"name":"SPAC630.03","type":"related"},{"name":"Spom972h-ACTR3","type":"exact"},{"name":"actin-like protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32390"}


id: GO:0018247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of phosphoribosyl dephospho-coenzyme A to protein via peptidyl-serine, to form O-(phosphoribosyl dephospho-coenzyme A)-L-serine; it is uncertain whether the phosphoribosyl glycosidic attachment to the dephospho-coenzyme A is alpha or beta, and through the 2' or the 3' position.","definition_xrefs":["RESID:AA0167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"protein-coenzyme A linkage","termid":"GO:0018246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phosphoribosyl dephospho-coenzyme A linkage","termid":"GO:0018247"}


id: PBO:0082981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic tyrosyl-tRNA synthetase; required for cytoplasmic protein synthesis; interacts with positions 34 and 35 of the tRNATyr anticodon; mutations in human ortholog YARS are associated with Charcot-Marie-Tooth (CMT) neuropathies; human ortholog YARS functionally complements the heat sensitivity of a ts allele; protein abundance increases in response to DNA replication stress","termid":"PBO:0082981"}


id: PBO:0036015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutamate","termid":"PBO:0036015"}


id: GO:0071168
data:
  {"annotated_genes":["SJAG_03591","SJAG_05978","SJAG_01825","SJAG_00823","SJAG_02074","SJAG_01716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101664,101760,87404,110534],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905412"},{"annotations":[102789],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905406"},{"annotations":[98769],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905634"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_02074":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chromatin","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to chromatin","type":"exact"}],"termid":"GO:0071168","terms_by_termid":{"GO:1905406":null,"GO:1905412":null,"GO:1905634":null}}


id: GO:0102465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + 2 NADH + 2 H+ + 2 O2 = nostoxanthin + 2 NAD + 2 H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"zeaxanthin 2,2'-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14018"],"termid":"GO:0102465"}


id: PBO:0054454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1851","termid":"PBO:0054454"}


id: PBO:0077371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 109","termid":"PBO:0077371"}


id: GO:0061919
data:
  {"annotated_genes":["SJAG_05289","SJAG_00824","SJAG_00380","SJAG_05184","SJAG_03435","SJAG_02723","SJAG_00053","SJAG_02663","SJAG_02432","SJAG_04860","SJAG_01783","SJAG_01876","SJAG_04023","SJAG_01722","SJAG_04232","SJAG_00059","SJAG_05017","SJAG_04021","SJAG_04249","SJAG_00724","SJAG_02433","SJAG_02699","SJAG_04655","SJAG_01080","SJAG_00355","SJAG_05000","SJAG_03442","SJAG_02315","SJAG_01251","SJAG_03718","SJAG_05210","SJAG_04219","SJAG_00704","SJAG_01382","SJAG_04837","SJAG_03467","SJAG_04552","SJAG_03136","SJAG_00820","SJAG_02100","SJAG_02539","SJAG_01467","SJAG_03100","SJAG_04759","SJAG_02414","SJAG_01274","SJAG_00732","SJAG_00029","SJAG_01716","SJAG_01561","SJAG_00645","SJAG_02525","SJAG_00850","SJAG_01509","SJAG_00284","SJAG_04991","SJAG_00114","SJAG_00115","SJAG_03345","SJAG_02640","SJAG_02441","SJAG_04963","SJAG_05261","SJAG_02655","SJAG_01135","SJAG_04435","SJAG_00004","SJAG_03170","SJAG_06309","SJAG_04502","SJAG_00763","SJAG_00169","SJAG_01415","SJAG_01283","SJAG_04496","SJAG_02765","SJAG_03851","SJAG_04294","SJAG_05245","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[72180,77317,78362,72583,93442,75818,106972,108890,78173,87283,77543,99033,71408,72002,71035,72921,90250,100038],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[74889,108891,85811],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[90251],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[85354,93199,74384,103010,87770,91118,78313,84860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006914"},{"annotations":[91044,94154,85812,93171,99034,104001,106973,108892,95788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000422"},{"annotations":[93157,95789,83634,104002,97609,94155,95491,93172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030242"},{"annotations":[95790,87771,94156,95212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032258"},{"annotations":[105105,94157,95791,93173,104003,85813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[84440,105158,76287,97997,106803,77874,105593,94657,100376,75429,92889,76168,104768,100313,99188,110374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016236"},{"annotations":[77424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016237"},{"annotations":[95493,90254,87285,88552,90576,100251,110430,88269,112937,72487,105970,84805,95213,83636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[102048],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[71855,73378,78559,103921,94933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[70540,99036,72179,72582,100252,71468,73231,78172,72920,72486,105971,87286,95214,73969,78361,73105,85815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[93188],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[109806,94426,105011,73334,102781,94972,107126],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010508"},{"annotations":[69222],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903599"},{"annotations":[101665,74853],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[85260],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[85816,105972],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061739"},{"annotations":[72579,78169,77227,68615],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010506"},{"annotations":[111774,78359,78164,94934,105973,86132,72918,72574,99037,103922,100253,95215,99822,110431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[77709,95496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"A cellular process involving delivery of a portion of the cytoplasm to lysosomes or to the plant or fungal vacuole that does not involve direct transport through the endocytic or vacuolar protein sorting (Vps) pathways. This process typically leads to degradation of the cargo; however, it can also be used to deliver resident proteins, such as in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["PMID:22966490","PMID:21997368","PMID:28596378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":80,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00169":null,"SJAG_00284":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00645":null,"SJAG_00704":null,"SJAG_00724":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00824":null,"SJAG_00850":null,"SJAG_01080":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01509":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02315":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02663":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03435":null,"SJAG_03442":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05017":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_05346":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"process utilizing autophagic mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0061919","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0000423":null,"GO:0006914":null,"GO:0010506":null,"GO:0010508":null,"GO:0016236":null,"GO:0016237":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0030242":null,"GO:0032258":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0061739":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null}}


id: GO:0141066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host extracellular matrix.","definition_xrefs":["PMID:11982763","PMID:2404867","PMID:25865874","PMID:21115719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"},{"relation_name":"is_a","term_name":"disruption of extracellular matrix of another organism","termid":"GO:0141041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host extracellular matrix","synonyms":[{"name":"disruption of host extracellular matrix","type":"broad"}],"termid":"GO:0141066"}


id: PBO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit","termid":"PBO:0090413"}


id: PBO:0036179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_at_Ser/Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036179"}


id: PBO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 1","termid":"PBO:0061832"}


id: PBO:0027820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0027820"}


id: PBO:0079893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 2","termid":"PBO:0079893"}


id: GO:0106251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N4-acetylcytidine +H2O = cytidine + acetate.","definition_xrefs":["PMID:31964920","RHEA:62932","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"N4-acetylcytidine amidohydrolase activity","termid":"GO:0106251"}


id: GO:1904776
data:
  {"annotated_genes":["SJAG_03602","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[93990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell cortex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"regulates","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell cortex","type":"exact"}],"termid":"GO:1904776","terms_by_termid":{"GO:0120047":null,"GO:0140325":null}}


id: GO:0010408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the cell wall arabinogalactan II glycoprotein variant which contains both an arabinogalactan protein (AGP) motif and a fasciclin domain.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinogalactan protein metabolic process","termid":"GO:0010405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"fasciclin-like arabinogalactan protein metabolic process","synonyms":[{"name":"fasciclin-like arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010408"}


id: GO:0035477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angioblast cell migration involved in selective angioblast sprouting.","definition_xrefs":["PMID:19815777","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035477"}


id: GO:0150025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an oxidised low-density lipoprotein particle and delivering the oxidised low-density lipoprotein particle into the cell via endocytosis.","definition_xrefs":["GOC:bc","PMID:27607416","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor activity","termid":"GO:0030228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"oxidised low-density lipoprotein particle receptor activity","synonyms":[{"name":"ox-LDL particle receptor activity","type":"exact"},{"name":"ox-LDL receptor activity","type":"related"},{"name":"oxLDL particle receptor activity","type":"exact"},{"name":"oxLDL receptor activity","type":"related"},{"name":"oxidised LDL particle receptor activity","type":"exact"},{"name":"oxidised LDL receptor activity","type":"related"},{"name":"oxidised low-density lipoprotein receptor activity","type":"related"},{"name":"oxidized LDL particle receptor activity","type":"exact"},{"name":"oxidized LDL receptor activity","type":"related"},{"name":"oxidized low-density lipoprotein particle receptor activity","type":"exact"},{"name":"oxidized low-density lipoprotein receptor activity","type":"related"}],"termid":"GO:0150025"}


id: PBO:0051642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1 pseudogene 1","termid":"PBO:0051642"}


id: PBO:0075824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 1","termid":"PBO:0075824"}


id: PBO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 13","termid":"PBO:0070547"}


id: GO:0035164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an embryonic mesoderm-derived hemocyte precursor cell acquires the specialized features of the phagocytic blood-cell type, the plasmatocyte.","definition_xrefs":["PMID:8174791","GOC:bf","PMID:11921077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic hemocyte differentiation","termid":"GO:0035163"},{"relation_name":"is_a","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic plasmatocyte differentiation","synonyms":[{"name":"embryonic plasmatocyte cell differentiation","type":"exact"}],"termid":"GO:0035164"}


id: PBO:0080852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YdjC chitooligosaccharide deacetylase homolog","termid":"PBO:0080852"}


id: PR:O14003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01671","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.10c","secondary_identifiers":["UniProtKB:O14003"],"synonyms":[{"name":"Spom972h-RFC5","type":"exact"},{"name":"replication factor C3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14003"}


id: PBO:0080426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 10","termid":"PBO:0080426"}


id: GO:0071024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains spliced leader (SL) RNA and associated proteins.","definition_xrefs":["GOC:krc","ISBN:0879697393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"SL snRNP","termid":"GO:0071024"}


id: PBO:0090239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glucose/fructose:proton symporter Ght6","termid":"PBO:0090239"}


id: FYPO:0005411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore results in a larger number of kinetochores remaining unattached than normal.","definition_xrefs":["PomBase:vw","PMID:18256284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"increased number of unattached kinetochores","synonyms":[{"name":"abnormal attachment of mitotic spindle microtubules to kinetochore resulting in increased number of unattached kinetochores","type":"exact"},{"name":"decreased attachment of mitotic spindle microtubules to kinetochore","type":"related"},{"name":"increased number of unattached kinetochores during mitotic cell cycle","type":"related"},{"name":"increased number of unattached kinetochores during vegetative growth","type":"exact"},{"name":"kinetochore loss","type":"related"}],"termid":"FYPO:0005411"}


id: SO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the coding sequence near a splice region of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_splice_region_variant","termid":"SO:0002079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_coding_splice_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Seattleseq:coding-notMod3-near-splice","type":"exact"},{"name":"Seattleseq:coding-unknown-near-splice","type":"exact"},{"name":"incomplete transcript coding splice variant","type":"exact"}],"termid":"SO:0002082"}


id: GO:0007481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the haltere disc are generated and organized. This includes the transformation of a haltere imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"haltere disc development","termid":"GO:0035216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere disc morphogenesis","synonyms":[{"name":"haltere disc metamorphosis","type":"exact"}],"termid":"GO:0007481"}


id: PR:O74821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC337.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe-S cluster assembly protein dre2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.10c","synonyms":[{"name":"Spom972h-SPBC337.10c","type":"exact"},{"name":"anamorsin homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74821"}


id: PBO:0029207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_spindle_elongation","termid":"PBO:0029207"}


id: PBO:0055646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3085","termid":"PBO:0055646"}


id: GO:0018273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form N6-retinal-L-lysine.","definition_xrefs":["RESID:AA0120"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-N6-retinal-L-lysine (obsolete GO:0018273)","termid":"GO:0018273"}


id: PBO:0090445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps54","termid":"PBO:0090445"}


id: GO:0035605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a nitric oxide (NO) group to a sulphur atom within a cysteine residue of a protein.","definition_xrefs":["PMID:20972425","GOC:sp","PMID:20972426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"peptidyl-cysteine S-nitrosylase activity","synonyms":[{"name":"S-nitrosylase activity","type":"exact"},{"name":"protein nitrosylase activity","type":"related"}],"termid":"GO:0035605"}


id: GO:0060307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential in a ventricular cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ventricular cardiac muscle cell membrane repolarization","synonyms":[{"name":"electrocardiogram T wave","type":"related"},{"name":"regulation of ventricular cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"regulation of ventricular cardiomyocyte membrane repolarization","type":"exact"},{"name":"ventricular repolarization","type":"related"}],"termid":"GO:0060307"}


id: GO:0046195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-nitrophenol, a nitroaromatic compound which is used in the production of dyes, leather treatment agents, fungicides and as an intermediate in the production of the insecticide parathion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-nitrophenol biosynthetic process (obsolete GO:0046195)","synonyms":[{"name":"4-nitrophenol anabolism","type":"exact"},{"name":"4-nitrophenol biosynthesis","type":"exact"},{"name":"4-nitrophenol biosynthetic process","type":"exact"},{"name":"4-nitrophenol formation","type":"exact"},{"name":"4-nitrophenol synthesis","type":"exact"}],"termid":"GO:0046195"}


id: FYPO:0007164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of microtubule sliding, i.e. movement of one microtubule along another microtubule, is decreased.","definition_xrefs":["GO:0051012","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule sliding","termid":"FYPO:0007164"}


id: PBO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9 (predicted)","termid":"PBO:0001067"}


id: GO:0017146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD.","direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"NMDA selective glutamate receptor complex","synonyms":[{"name":"N-methyl-D-aspartate selective glutamate receptor complex","type":"exact"},{"name":"NMDA-selective glutamate receptor","type":"exact"}],"termid":"GO:0017146"}


id: PBO:0030082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip","termid":"PBO:0030082"}


id: PBO:0086714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant is deficient in cell wall mannosylphosphate and has long chronological lifespan; genetic interactions suggest a role in ER-associated protein degradation (ERAD); SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086714"}


id: GO:0052196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont defense response (obsolete GO:0052196)","synonyms":[{"name":"down regulation by host of symbiont defense response","type":"exact"},{"name":"down-regulation by host of symbiont defense response","type":"exact"},{"name":"downregulation by host of symbiont defense response","type":"exact"},{"name":"inhibition by host of symbiont defense response","type":"narrow"}],"termid":"GO:0052196"}


id: FYPO:0000944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a normal morphology (i.e. size, shape, or structure). An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spore morphology","termid":"FYPO:0000943"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000004"],"is_obsolete":false,"name":"inviable spore with normal morphology","synonyms":[{"name":"lethal; spore with normal morphology","type":"exact"},{"name":"spore germination abolished, normal spore morphology","type":"related"}],"termid":"FYPO:0000944"}


id: PBO:0025425
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xeroderma pigementosum","termid":"PBO:0025425"}


id: GO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in the germ line of a hermaphrodite.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite germ-line sex determination","secondary_identifiers":["GO:0042005"],"termid":"GO:0040021"}


id: PBO:0073745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 1","termid":"PBO:0073745"}


id: GO:0031643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a myelin sheath around nerve axons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myelination","termid":"GO:0031641"},{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myelination","synonyms":[{"name":"activation of myelination","type":"narrow"},{"name":"stimulation of myelination","type":"narrow"},{"name":"up regulation of myelination","type":"exact"},{"name":"up-regulation of myelination","type":"exact"},{"name":"upregulation of myelination","type":"exact"}],"termid":"GO:0031643"}


id: GO:1902671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:16607022","PMID:5961344","GOC:giardia","GO_REF:0000064","GOC:TermGenie","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left anterior flagellum","termid":"GO:0097554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"left anterior basal body","synonyms":[{"name":"cilial basal body of left anterior cilium","type":"exact"},{"name":"cilial basal body of left anterior flagellum","type":"exact"},{"name":"ciliary basal body of left anterior cilium","type":"exact"},{"name":"ciliary basal body of left anterior flagellum","type":"exact"},{"name":"cilium basal body of left anterior cilium","type":"exact"},{"name":"cilium basal body of left anterior flagellum","type":"exact"},{"name":"left anterior flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left anterior cilium","type":"exact"},{"name":"microtubule basal body of left anterior flagellum","type":"exact"}],"termid":"GO:1902671"}


id: GO:1990010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a compound eye retinal cell.","definition_xrefs":["PMID:12021768","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}


id: FYPO:0005766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions where nucleosomes are depleted.","definition_xrefs":["PomBase:mah","PMID:27611590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased replication fork pausing at nucleosome-depleted regions","synonyms":[{"name":"increased replication fork pausing at nucleosome-depleted regions during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at nucleosome-depleted regions during vegetative growth","type":"exact"}],"termid":"FYPO:0005766"}


id: GO:0071247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chromate","termid":"GO:0046687"},{"relation_name":"is_a","term_name":"cellular response to inorganic substance","termid":"GO:0071241"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chromate","termid":"GO:0071247"}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:imk","PMID:17161604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: GO:0140976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular processes and signaling pathways by which a cell responds to disruption of the integrity of its plasma membrane by another organism. Some toxins produced by other organisms can form pores in membranes, or affect the membrane permeability.","definition_xrefs":["PMID:21518219","PMID:17234446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response against perturbation of plasma membrane integrity","synonyms":[{"name":"defense response against disruption of plasma membrane integrity","type":"exact"}],"termid":"GO:0140976"}


id: PBO:0087303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI complex-associated protein; involved in 3'-5' degradation of long 3'UTR-containing mRNA, poorly translated mRNA, and other RNA regions devoid of ribosomes; proposed to assist the cytoplasmic exosome in a Ska1-SKI complex when a direct interaction between the ribosome and the SKI complex is absent","termid":"PBO:0087303"}


id: PBO:0038333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_stimulus","termid":"PBO:0038333"}


id: PBO:0031248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0031248"}


id: PBO:0091048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase regulatory subunit Dpm2","termid":"PBO:0091048"}


id: PBO:0085736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription; interacts with RNA polymerase II subunits Rpb2p, Rpb3, and Rpb11p; has similarity to human RPAP1","termid":"PBO:0085736"}


id: PBO:0088907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane borate efflux transmembrane transporter Bor1","termid":"PBO:0088907"}


id: PBO:0031366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_2-deoxyglucose","termid":"PBO:0031366"}


id: GO:0015257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete organic anion channel activity (obsolete GO:0015257)","synonyms":[{"name":"organic anion channel activity","type":"exact"}],"termid":"GO:0015257"}


id: PBO:0060764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 8","termid":"PBO:0060764"}


id: FYPO:0007015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of tRNA genes is increased.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at tRNA genes","termid":"FYPO:0004033"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","termid":"FYPO:0007734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of transfer RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007015"}


id: PBO:0053804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1061","termid":"PBO:0053804"}


id: PBO:0084124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heterotrimeric nascent polypeptide-associated complex beta3 subunit; complex binds ribosomes via its beta-subunits in close proximity to nascent polypeptides; interacts with Caf130p of the CCR4-NOT complex; similar to human BTF3; BTT1 has a paralog, EGD1, that arose from the whole genome duplication","termid":"PBO:0084124"}


id: GO:0010419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the side chains of pectic rhamnogalacturonan II. A number of structurally distinct di- and oligosaccharides can be attached to the C-3 and C-2 of the backbone, respectively.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan II side chain metabolic process","synonyms":[{"name":"rhamnogalacturonan II side chain metabolism","type":"exact"}],"termid":"GO:0010419"}


id: GO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out by any of the organs or tissues of neurological system.","definition_xrefs":["GOC:mtg_cardio","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process","synonyms":[{"name":"neurological system process","type":"exact"},{"name":"neurophysiological process","type":"exact"},{"name":"pan-neural process","type":"related"}],"termid":"GO:0050877"}


id: PBO:0090186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Crt10, involved in ribosomal RNA decay","termid":"PBO:0090186"}


id: GO:0047373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(4-acetoxybut-1-ynyl)-2,2'-bithiophene + H2O = 5-(4-hydroxy-but-1-ynyl)-2,2'-bithiophene + acetate + H+.","definition_xrefs":["RHEA:11548","EC:3.1.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"acetoxybutynylbithiophene deacetylase activity","secondary_identifiers":["KEGG_REACTION:R04490","MetaCyc:3.1.1.54-RXN"],"synonyms":[{"name":"5-(4-acetoxy-1-butynyl)-2,2'-bithiophene:acetate esterase activity","type":"related"},{"name":"5-(4-acetoxybut-1-ynyl)-2,2'-bithiophene O-acetylhydrolase activity","type":"related"},{"name":"acetoxybutynylbithiophene esterase activity","type":"related"}],"termid":"GO:0047373"}


id: PATO:0000375
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distance which is lesser relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased distance","synonyms":[{"name":"short distance","type":"related"}],"termid":"PATO:0000375"}


id: GO:0007489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of the differentiation of polytenized larval hypodermal cells from abdominal histoblasts. The abdominal histoblasts remain a small cluster of diploid cells among the polytenized larval hypodermal cells.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"histoblast morphogenesis","termid":"GO:0007488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of imaginal histoblast diploidy","termid":"GO:0007489"}


id: PBO:0062442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 106 pseudogene","termid":"PBO:0062442"}


id: PBO:0029369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029369"}


id: PBO:0030008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level","termid":"PBO:0030008"}


id: GO:0019634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphonates, any organic compounds containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Metabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["GOC:js","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic phosphonate metabolic process","synonyms":[{"name":"organophosphonate metabolic process","type":"related"},{"name":"phosphonate metabolism","type":"exact"}],"termid":"GO:0019634"}


id: PBO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Phenylalanine","termid":"PBO:0002185"}


id: GO:0062151
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that is capable of catalase activity.","definition_xrefs":["GOC:bhm","PMID:10656833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"catalase complex","termid":"GO:0062151"}


id: PBO:0045524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTW domain containing 1","termid":"PBO:0045524"}


id: PBO:0060981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve growth factor receptor","termid":"PBO:0060981"}


id: GO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the separation of duplicated centrosome components at the beginning of mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic centrosome separation","termid":"GO:0046602"}


id: PBO:0039799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archain 1","termid":"PBO:0039799"}


id: GO:0008236
data:
  {"annotated_genes":["SJAG_01868","SJAG_02565","SJAG_01136","SJAG_00984","SJAG_04398","SJAG_00975","SJAG_03121","SJAG_05286","SJAG_03648","SJAG_04819","SJAG_00737","SJAG_03261","SJAG_02809","SJAG_04785","SJAG_03258","SJAG_03910","SJAG_01285","SJAG_04928","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84895],"is_not":false,"summary":null,"term":"GO:0008236"},{"annotations":[75643,74923,78094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[103450,74377,76416,89790,78224,75381,99270,88910,113537,73934,104541,87276,74903,99276,96798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[73648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"serine hydrolase activity","termid":"GO:0017171"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0008233","GO:0140096"],"is_obsolete":false,"name":"serine-type peptidase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-6801766","Reactome:R-HSA-2022383","Reactome:R-HSA-9839072","Reactome:R-HSA-9839110","Reactome:R-HSA-1461993","Reactome:R-HSA-3132753"],"synonyms":[{"name":"serine protease activity","type":"narrow"}],"termid":"GO:0008236","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null}}


id: PBO:0077713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1","termid":"PBO:0077713"}


id: PBO:0011509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome BAR domain protein Pil1","termid":"PBO:0011509"}


id: PBO:0050432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 3","termid":"PBO:0050432"}


id: GO:0030798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + trans-aconitate = (E)-3-(methoxycarbonyl)pent-2-enedioate + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.144","RHEA:14969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trans-aconitate 2-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-2441","KEGG_REACTION:R05763"],"synonyms":[{"name":"S-adenosyl-L-methionine:(E)-prop-1-ene-1,2,3-tricarboxylate 2'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030798"}


id: PBO:0027447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_okadaic_acid","termid":"PBO:0027447"}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: PBO:0074598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10","termid":"PBO:0074598"}


id: PBO:0085321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; synaptojanin-like protein with an N-terminal Sac1 domain, plays a role in phosphatidylinositol 4,5-bisphosphate homeostasis and in endocytosis; null mutation confers cold-tolerant growth","termid":"PBO:0085321"}


id: GO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel development","termid":"GO:0060841"}


id: PBO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 like","termid":"PBO:0070744"}


id: GO:0050920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"regulates","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chemotaxis","termid":"GO:0050920"}


id: GO:0016258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation, in the Golgi apparatus, of side chain diversity from high mannose Man5GlcNAc2-Asn N-glycans by specific glycosyltransferases and glycosidases.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan diversification","termid":"GO:0016258"}


id: PR:000044739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PMID:28367989","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 phosphorylated 6 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"S7P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:6","type":"exact"}],"termid":"PR:000044739"}


id: GO:1900410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone modification.","definition_xrefs":["GOC:TermGenie","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900410)","termid":"GO:1900410"}


id: FYPO:0002571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dGTP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular dNTP level","termid":"FYPO:0006401"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular dGTP level","synonyms":[{"name":"decreased cellular dGTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dGTP level during vegetative growth","type":"exact"},{"name":"reduced cellular dGTP level","type":"exact"}],"termid":"FYPO:0002571"}


id: GO:0000758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation or adhesion of compatible mating types via complementary cell-cell interactions during conjugation without cellular fusion of a unicellular organism.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"response to pheromone regulating conjugation with mutual genetic exchange","termid":"GO:0000756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"agglutination involved in conjugation with mutual genetic exchange","synonyms":[{"name":"agglutination involved in conjugation without cellular fusion","type":"exact"},{"name":"sexual flocculation","type":"exact"}],"termid":"GO:0000758"}


id: PBO:0034509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_mitotic_interphase","termid":"PBO:0034509"}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: PBO:0054970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2384","termid":"PBO:0054970"}


id: PBO:0091703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of chronological lifespan protein Ecl2","termid":"PBO:0091703"}


id: PBO:0039275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 3, pseudogene","termid":"PBO:0039275"}


id: GO:0061569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into UDP, uridine diphosphate, to produce UTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP phosphorylation (obsolete GO:0061569)","termid":"GO:0061569"}


id: PBO:0081406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 253","termid":"PBO:0081406"}


id: GO:0005814
data:
  {"annotated_genes":["SJAG_00719"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85380],"is_not":false,"summary":null,"term":"GO:0005814"}]},"cv_name":"cellular_component","definition":"A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00719":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centriole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Centriole","NIF_Subcellular:sao95019936"],"synonyms":[{"name":"daughter centriole","type":"narrow"},{"name":"mother centriole","type":"narrow"}],"termid":"GO:0005814","terms_by_termid":{"GO:0005814":null}}


id: PBO:0052303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH-type splicing regulatory protein pseudogene 1","termid":"PBO:0052303"}


id: PBO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 10","termid":"PBO:0044270"}


id: PBO:0030632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_7-methylguanosine_cap_hypermethylation","termid":"PBO:0030632"}


id: FYPO:0003021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethyl N-phenylcarbamate (EPC). Cells stop growing (and may die) at a concentration of EPC that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to EPC","synonyms":[{"name":"hypersensitive to EPC","type":"exact"},{"name":"sensitive to EPC during mitotic cell cycle","type":"related"},{"name":"sensitive to EPC during vegetative growth","type":"exact"},{"name":"sensitive to ethyl N-phenylcarbamate","type":"exact"}],"termid":"FYPO:0003021"}


id: GO:0003323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a type B pancreatic cell over time, from its formation to the mature structure. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["CL:0000169","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"part_of","term_name":"type B pancreatic cell differentiation","termid":"GO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell development","synonyms":[{"name":"pancreatic B cell development","type":"exact"},{"name":"pancreatic beta cell development","type":"exact"}],"termid":"GO:0003323"}


id: PBO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 2","termid":"PBO:0075304"}


id: PBO:0109225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 6","termid":"PBO:0109225"}


id: PBO:0030920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_phenotype","termid":"PBO:0030920"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: PBO:0045922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 14 pseudogene 1","termid":"PBO:0045922"}


id: PBO:0069516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 785, pseudogene","termid":"PBO:0069516"}


id: PATO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers but not extraembryonic cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Pluripotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pluripotent","termid":"PATO:0001403"}


id: GO:1905569
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89700],"is_not":false,"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:654321","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of siderophore biosynthetic process","termid":"GO:1900705"},{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"negatively_regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of ferrichrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of ferrichrome anabolism","type":"exact"},{"name":"down regulation of ferrichrome biosynthesis","type":"exact"},{"name":"down regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"down regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"down regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"down regulation of ferrichrome formation","type":"exact"},{"name":"down regulation of ferrichrome synthesis","type":"exact"},{"name":"down-regulation of ferrichrome anabolism","type":"exact"},{"name":"down-regulation of ferrichrome biosynthesis","type":"exact"},{"name":"down-regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"down-regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"down-regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"down-regulation of ferrichrome formation","type":"exact"},{"name":"down-regulation of ferrichrome synthesis","type":"exact"},{"name":"downregulation of ferrichrome anabolism","type":"exact"},{"name":"downregulation of ferrichrome biosynthesis","type":"exact"},{"name":"downregulation of ferrichrome biosynthetic process","type":"exact"},{"name":"downregulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"downregulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"downregulation of ferrichrome formation","type":"exact"},{"name":"downregulation of ferrichrome synthesis","type":"exact"},{"name":"inhibition of ferrichrome anabolism","type":"narrow"},{"name":"inhibition of ferrichrome biosynthesis","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"inhibition of ferrichrome formation","type":"narrow"},{"name":"inhibition of ferrichrome synthesis","type":"narrow"},{"name":"negative regulation of ferrichrome anabolism","type":"exact"},{"name":"negative regulation of ferrichrome biosynthesis","type":"exact"},{"name":"negative regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"negative regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"negative regulation of ferrichrome formation","type":"exact"},{"name":"negative regulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905569","terms_by_termid":{"GO:1905569":null}}


id: SO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001053 nested_transposon (obsolete SO:0001053)","termid":"SO:0001053"}


id: PBO:0056405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 3","termid":"PBO:0056405"}


id: PBO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U12 small nuclear","termid":"PBO:0070262"}


id: PBO:0041505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13 open reading frame 46","termid":"PBO:0041505"}


id: PBO:0047582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 2","termid":"PBO:0047582"}


id: PBO:0088073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease, deubiquitinates Ub-protein moieties; interacts with proteins that function in rRNA production and ribosome biogenesis via its intrinsically disordered regions; stabilizes Rpa190p by deubiquitination; controls PCNA deubiquitylation; may regulate silencing by acting on Sir4p; involved in posttranscriptionally regulating Gap1p, possibly other transporters; localized to the nucleolus; null mutant phenotypes are functionally complemented by human USP36","termid":"PBO:0088073"}


id: FYPO:0005300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitosis","termid":"FYPO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic spindle assembly checkpoint signaling","synonyms":[{"name":"decreased protein localisation to kinetochore during mitotic spindle assembly checkpoint signalling","type":"exact"},{"name":"decreased protein localization to kinetochore during mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"decreased protein localization to kinetochore during signal transduction involved in mitotic spindle assembly checkpoint","type":"exact"},{"name":"decreased protein localization to kinetochore during spindle assembly checkpoint signaling during mitotic cell cycle","type":"exact"},{"name":"defective protein recruitment to unattached kinetochores","type":"exact"},{"name":"reduced protein localization to kinetochore during mitotic spindle assembly checkpoint signaling","type":"exact"}],"termid":"FYPO:0005300"}


id: PBO:0051920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3 binding protein","termid":"PBO:0051920"}


id: GO:0051875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pigment granule localization","synonyms":[{"name":"pigment granule localisation","type":"exact"}],"termid":"GO:0051875"}


id: GO:2000475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of opioid receptor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of opioid receptor signaling pathway","termid":"GO:2000474"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of opioid receptor signaling pathway","synonyms":[{"name":"negative regulation of opioid receptor signalling pathway","type":"exact"}],"termid":"GO:2000475"}


id: PBO:0011980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad57/Rhp57","termid":"PBO:0011980"}


id: SO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rescue","termid":"SO:0000814"},{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue_region","synonyms":[{"name":"rescue fragment","type":"exact"},{"name":"rescue region","type":"exact"},{"name":"rescue segment","type":"related"}],"termid":"SO:0000411"}


id: GO:0033329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of kaempferol.","definition_xrefs":["MetaCyc:PWY-5320","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kaempferol O-glucoside metabolic process","synonyms":[{"name":"kaempferol O-glucoside metabolism","type":"exact"}],"termid":"GO:0033329"}


id: FYPO:0006338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are located near the cell tips (instead of at the midpoint of the long axis of each daughter cell) during telophase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:15937127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during mitotic telophase","termid":"FYPO:0009105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"nucleus mislocalized towards cell tip during mitotic telophase","synonyms":[{"name":"nuclear displacement towards cell tip during mitotic telophase","type":"exact"},{"name":"nucleus displaced towards cell tip during mitotic telophase","type":"exact"},{"name":"nucleus mislocalised to cell tip during mitotic telophase","type":"exact"},{"name":"nucleus mislocalized towards cell end during mitotic telophase","type":"exact"},{"name":"nucleus mislocalized towards cell tip during mitotic telophase during mitotic cell cycle","type":"related"},{"name":"nucleus mislocalized towards cell tip during mitotic telophase during vegetative growth","type":"exact"},{"name":"telophase nucleus mislocalized to cell tip","type":"exact"}],"termid":"FYPO:0006338"}


id: PBO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIIb","termid":"PBO:0047449"}


id: GO:1903919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament severing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23325791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"negatively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament severing","synonyms":[{"name":"down regulation of F-actin severing","type":"exact"},{"name":"down regulation of actin filament severing","type":"exact"},{"name":"down regulation of actin filament severing activity","type":"related"},{"name":"down regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"down-regulation of F-actin severing","type":"exact"},{"name":"down-regulation of actin filament severing","type":"exact"},{"name":"down-regulation of actin filament severing activity","type":"related"},{"name":"down-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"downregulation of F-actin severing","type":"exact"},{"name":"downregulation of actin filament severing","type":"exact"},{"name":"downregulation of actin filament severing activity","type":"related"},{"name":"downregulation of barbed-end actin capping/severing activity","type":"related"},{"name":"inhibition of F-actin severing","type":"narrow"},{"name":"inhibition of actin filament severing","type":"narrow"},{"name":"inhibition of actin filament severing activity","type":"related"},{"name":"inhibition of barbed-end actin capping/severing activity","type":"related"},{"name":"negative regulation of F-actin severing","type":"exact"},{"name":"negative regulation of actin filament severing activity","type":"related"},{"name":"negative regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903919"}


id: PBO:0087336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific assembly chaperone for ribosomal protein Rpl4a/Rpl4b; associates co-translationally with a evolutionarily conserved internal loop of nascent Rpl4a/b, and is released only after an the eukaryotic-specific extension of nascent Rpl4a/b mediates nuclear import, incorporation into the pre-ribosome and complex disassembly; role in biogenesis of the 60S ribosomal subunit; transcriptionally co-regulated with rRNA and ribosome biosynthesis genes","termid":"PBO:0087336"}


id: PBO:0088016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I membrane protein with a J domain; required to preserve the folding capacity of the endoplasmic reticulum; loss of the non-essential ERJ5 gene leads to a constitutively induced unfolded protein response","termid":"PBO:0088016"}


id: GO:0071579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of zinc ions (Zn2+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"zinc ion transport","termid":"GO:0006829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of zinc ion transport","termid":"GO:0071579"}


id: PBO:0047882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q31.1)","termid":"PBO:0047882"}


id: PBO:0034318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-receives_input_from","termid":"PBO:0034318"}


id: PBO:0016890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family meiotic suppressor protein Ste7","termid":"PBO:0016890"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: PBO:0082537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth","termid":"PBO:0082537"}


id: PR:Q7LL04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1494.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LL04"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0676 protein C1494.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.01","synonyms":[{"name":"Spom972h-SPCC1494.01","type":"exact"}],"termid":"PR:Q7LL04"}


id: FYPO:0003524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cytoskeleton organization is abnormal at one or both cell tips.","definition_xrefs":["PMID:24954052","GO:0030036","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cytoskeleton organization at cell tip","synonyms":[{"name":"abnormal actin cytoskeleton organisation at cell tip","type":"exact"},{"name":"abnormal actin cytoskeleton organization at cell end","type":"exact"},{"name":"abnormal actin cytoskeleton organization at cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal actin cytoskeleton organization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003524"}


id: PBO:0049683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase like","termid":"PBO:0049683"}


id: PBO:0071634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 53","termid":"PBO:0071634"}


id: PBO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APAF1 interacting protein","termid":"PBO:0039702"}


id: PBO:0060080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 27","termid":"PBO:0060080"}


id: PBO:0069272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 528, pseudogene","termid":"PBO:0069272"}


id: PBO:0086231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with CCT (chaperonin containing TCP-1) complex; has a role in actin and tubulin folding; has weak similarity to phosducins, which are G-protein regulators","termid":"PBO:0086231"}


id: PBO:0040401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 2","termid":"PBO:0040401"}


id: GO:0043364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the activation of an enzyme by generating an organic free radical on a glycine residue via a homolytic cleavage of S-adenosyl-L-methionine (SAM).","definition_xrefs":["GOC:jl","PMID:24486374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glycyl-radical enzyme activating activity","secondary_identifiers":["EC:1.97.1.-"],"synonyms":[{"name":"catalysis of free radical formation","type":"broad"}],"termid":"GO:0043364"}


id: FYPO:0006449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of histone H3 acetylation is lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:26401015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of histone H3 acetylation during vegetative growth","synonyms":[{"name":"decreased rate of histone H3 acetylation during mitotic cell cycle","type":"related"},{"name":"reduced rate of histone H3 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006449"}


id: PBO:0090607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex histone H4-like subunit Taf6","termid":"PBO:0090607"}


id: GO:0061643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of axon","termid":"GO:0061643"}


id: PBO:0060125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 26","termid":"PBO:0060125"}


id: GO:0050145
data:
  {"annotated_genes":["SJAG_02038","SJAG_04849","SJAG_03798","SJAG_04657","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71926,72006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[78876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004127"},{"annotations":[75223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[70970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[78880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"},{"annotations":[113145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009041"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null,"SJAG_03798":null,"SJAG_04657":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"nucleoside monophosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-9754978","Reactome:R-HSA-73548","MetaCyc:NUCLEOSIDE-PHOSPHATE-KINASE-RXN","Reactome:R-HSA-6788798","GO:0019201","Reactome:R-HSA-6788810","Reactome:R-HSA-73635","Reactome:R-HSA-2162092","RHEA:24036","Reactome:R-HSA-75126","Reactome:R-HSA-75125","EC:2.7.4.4"],"synonyms":[{"name":"ATP:nucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"NMP-kinase activity","type":"related"},{"name":"nucleoside-phosphate kinase activity","type":"exact"},{"name":"nucleotide kinase activity","type":"related"}],"termid":"GO:0050145","terms_by_termid":{"GO:0004017":null,"GO:0004127":null,"GO:0004385":null,"GO:0004798":null,"GO:0009041":null,"GO:0033862":null}}


id: PBO:0036001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_generation_of_precursor_metabolites_and_energy_gene_mRNA_during_vegetative_growth","termid":"PBO:0036001"}


id: PBO:0049813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 5","termid":"PBO:0049813"}


id: PBO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030413"}


id: PBO:0078359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-2","termid":"PBO:0078359"}


id: PBO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 3","termid":"PBO:0043913"}


id: PBO:0080422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 6","termid":"PBO:0080422"}


id: GO:1905516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fertilization.","definition_xrefs":["PMID:27564576","GO_REF:0000058","GOC:hbye","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fertilization","termid":"GO:0080154"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fertilization","synonyms":[{"name":"activation of fertilization","type":"narrow"},{"name":"activation of syngamy","type":"narrow"},{"name":"positive regulation of syngamy","type":"exact"},{"name":"up regulation of fertilization","type":"exact"},{"name":"up regulation of syngamy","type":"exact"},{"name":"up-regulation of fertilization","type":"exact"},{"name":"up-regulation of syngamy","type":"exact"},{"name":"upregulation of fertilization","type":"exact"},{"name":"upregulation of syngamy","type":"exact"}],"termid":"GO:1905516"}


id: PBO:0029258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029258"}


id: PBO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAlv9 family protein, involved in post Golgi transport (predicted)","termid":"PBO:0001590"}


id: PBO:0082706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; forms a subcomplex with Mic10p and Mic27p whose assembly and stability requires cardiolipin","termid":"PBO:0082706"}


id: MOD:01986
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-serine.","definition_xrefs":["PubMed:21526839","RESID:AA0623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(L-cystein-S-yl)-L-serine","synonyms":[{"name":"(2R)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-hydroxypropanoic acid","type":"exact"},{"name":"(2R,5R)-2,5-diamino-5-carboxy-6-hydroxy-4-thiahexanoic acid","type":"exact"}],"termid":"MOD:01986"}


id: GO:0052722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fatty acid + O2 + 2 NADPH + H+ = fatty acid with in-chain hydroxy group + 2 NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-12186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"fatty acid in-chain hydroxylase activity","secondary_identifiers":["RHEA:45084"],"termid":"GO:0052722"}


id: GO:0102585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside + malonyl-CoA + H+ = cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-malonylglucoside + coenzyme A.","definition_xrefs":["GOC:pz","PMID:17292360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15331"],"termid":"GO:0102585"}


id: PBO:0061198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIN1 (RPN12) binding protein 1 homolog","termid":"PBO:0061198"}


id: GO:0015628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are secreted across the outer membrane of Gram-negative bacteria by the type II secretion system. Proteins using this pathway are first translocated across the cytoplasmic membrane via the Sec or Tat pathways.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type II secretion system","synonyms":[{"name":"protein secretion by the T2S","type":"exact"},{"name":"protein secretion by the T2SS","type":"exact"},{"name":"protein secretion by the general secretion pathway","type":"related"},{"name":"protein secretion by the general secretory pathway","type":"related"},{"name":"protein secretion by the type II protein secretion system","type":"exact"},{"name":"type II protein secretion system","type":"exact"}],"termid":"GO:0015628"}


id: PBO:0029939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_elongated_germ_tubes_(obsolete_FYPO:0002298)","termid":"PBO:0029939"}


id: GO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"octopamine metabolic process","termid":"GO:0046333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"octopamine catabolic process","synonyms":[{"name":"octopamine breakdown","type":"exact"},{"name":"octopamine catabolism","type":"exact"},{"name":"octopamine degradation","type":"exact"}],"termid":"GO:0046334"}


id: PR:O74627
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pch1 gene.","definition_xrefs":["UniProtKB:O74627","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pch1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.06","synonyms":[{"name":"Spom972h-pch1","type":"exact"},{"name":"pombe cyclin C homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74627"}


id: GO:1990964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex probably required for the internalization of endosomes during actin-coupled endocytosis. Links the site of endocytosis to the cell membrane-associated actin cytoskeleton, coordinating ARP2/3 stimulation at the later stages of endocytosis. Present in the late endocytic coat.","definition_xrefs":["PMID:11739778","GOC:bhm","PMID:10594004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex","termid":"GO:1990964"}


id: PBO:0045716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F3 intronic transcript 1","termid":"PBO:0045716"}


id: PBO:0057608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-5","termid":"PBO:0057608"}


id: GO:0048611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic digestive tract development","termid":"GO:0048566"},{"relation_name":"part_of","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic ectodermal digestive tract development","synonyms":[{"name":"embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048611"}


id: GO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["PMID:11741859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiation of acetate catabolic process","termid":"GO:0043077"},{"relation_name":"part_of","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"initiation of acetate catabolic process by acetate","synonyms":[{"name":"initiation of acetate breakdown by acetate","type":"exact"},{"name":"initiation of acetate degradation by acetate","type":"exact"}],"termid":"GO:0045146"}


id: PBO:0090936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase Ptp4/Dgk1","termid":"PBO:0090936"}


id: PBO:0063417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE2A antisense RNA 2","termid":"PBO:0063417"}


id: PBO:0042895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial development protein 1","termid":"PBO:0042895"}


id: GO:1905211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast chemotaxis.","definition_xrefs":["PMID:8760137","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of fibroblast chemotaxis","termid":"GO:1905210"},{"relation_name":"negatively_regulates","term_name":"fibroblast chemotaxis","termid":"GO:1990956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast chemotaxis","synonyms":[{"name":"down regulation of fibroblast chemotaxis","type":"exact"},{"name":"down-regulation of fibroblast chemotaxis","type":"exact"},{"name":"downregulation of fibroblast chemotaxis","type":"exact"},{"name":"inhibition of fibroblast chemotaxis","type":"narrow"}],"termid":"GO:1905211"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: PBO:0056865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 1","termid":"PBO:0056865"}


id: PBO:0060153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 1 (pseudogene)","termid":"PBO:0060153"}


id: PBO:0066409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT like 1","termid":"PBO:0066409"}


id: PBO:0072270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 8","termid":"PBO:0072270"}


id: PR:P87149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium transporter MRS2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13890:SF3","PRO:DNx","OMA:SCHPO03635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane magnesium transporter mrs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.08c","secondary_identifiers":["UniProtKB:P87149"],"synonyms":[{"name":"RNA-splicing protein mrs2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRS2","type":"exact"}],"termid":"PR:P87149"}


id: PBO:0054673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2079","termid":"PBO:0054673"}


id: PBO:0090120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsr1","termid":"PBO:0090120"}


id: PBO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BN member 2 pseudogene","termid":"PBO:0062248"}


id: PR:Q09796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kap111 gene.","definition_xrefs":["UniProtKB:Q09796","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin beta-like protein kap111 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.02","synonyms":[{"name":"Spom972h-kap111","type":"exact"},{"name":"karyopherin-111 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09796"}


id: GO:0030820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP catabolic process (obsolete GO:0030820)","synonyms":[{"name":"regulation of 3',5' cAMP catabolic process","type":"exact"},{"name":"regulation of 3',5' cAMP catabolism","type":"exact"},{"name":"regulation of 3',5'-cAMP catabolic process","type":"exact"},{"name":"regulation of 3',5'-cAMP catabolism","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate catabolic process","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate catabolism","type":"exact"},{"name":"regulation of cAMP breakdown","type":"exact"},{"name":"regulation of cAMP catabolism","type":"exact"},{"name":"regulation of cAMP degradation","type":"exact"},{"name":"regulation of cyclic AMP catabolic process","type":"exact"},{"name":"regulation of cyclic AMP catabolism","type":"exact"}],"termid":"GO:0030820"}


id: PBO:0088150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuole membrane protein that interacts with Atg8p; functions in the vacuolar membrane recruitment of Atg8p to facilitate the degradation of vacuolar integral membrane proteins during early-stationary vacuole turnover (EVT), a general degradation process for vacuolar integral membrane proteins when cells enter stationary phase; null mutant is defective in stationary phase-induced vacuolar microdomain formation; homolog of S. pombe hfl1; homolog of human TMEM184","termid":"PBO:0088150"}


id: FYPO_EXT:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"large fraction of cells (penetrance) or strong phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high","termid":"FYPO_EXT:0000001"}


id: PBO:0071900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 38","termid":"PBO:0071900"}


id: PBO:0063873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 2","termid":"PBO:0063873"}


id: PBO:0077782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I mitochondrial","termid":"PBO:0077782"}


id: GO:0051588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"neurotransmitter transport","termid":"GO:0006836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of neurotransmitter transport","termid":"GO:0051588"}


id: GO:0103082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + acetyl-CoA + H2O = H+ + 2-(4'-methylthio)butylmalate + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"2-(4'-methylthio)butylmalate synthase activity","secondary_identifiers":["MetaCyc:RXNQT-4166"],"termid":"GO:0103082"}


id: GO:0009310
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine breakdown","type":"exact"},{"name":"amine catabolism","type":"exact"},{"name":"amine degradation","type":"exact"}],"termid":"GO:0009310","terms_by_termid":{"GO:0009447":null}}


id: FYPO:0004253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased nuclease activity","synonyms":[{"name":"reduced nuclease activity","type":"exact"}],"termid":"FYPO:0004253"}


id: PBO:0048755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLYCTK antisense RNA 1","termid":"PBO:0048755"}


id: GO:1905809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synapse organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27779093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse organization","synonyms":[{"name":"down regulation of synapse development","type":"exact"},{"name":"down regulation of synapse morphogenesis","type":"related"},{"name":"down regulation of synapse organisation","type":"exact"},{"name":"down regulation of synapse organization","type":"exact"},{"name":"down regulation of synapse organization and biogenesis","type":"related"},{"name":"down-regulation of synapse development","type":"exact"},{"name":"down-regulation of synapse morphogenesis","type":"related"},{"name":"down-regulation of synapse organisation","type":"exact"},{"name":"down-regulation of synapse organization","type":"exact"},{"name":"down-regulation of synapse organization and biogenesis","type":"related"},{"name":"downregulation of synapse development","type":"exact"},{"name":"downregulation of synapse morphogenesis","type":"related"},{"name":"downregulation of synapse organisation","type":"exact"},{"name":"downregulation of synapse organization","type":"exact"},{"name":"downregulation of synapse organization and biogenesis","type":"related"},{"name":"inhibition of synapse development","type":"narrow"},{"name":"inhibition of synapse morphogenesis","type":"related"},{"name":"inhibition of synapse organisation","type":"narrow"},{"name":"inhibition of synapse organization","type":"narrow"},{"name":"inhibition of synapse organization and biogenesis","type":"related"},{"name":"negative regulation of synapse development","type":"exact"},{"name":"negative regulation of synapse morphogenesis","type":"related"},{"name":"negative regulation of synapse organisation","type":"exact"},{"name":"negative regulation of synapse organization and biogenesis","type":"related"}],"termid":"GO:1905809"}


id: GO:0061527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dopamine by a cell in which the dopamine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal dopamine secretion","termid":"GO:0099124"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"},{"relation_name":"part_of","term_name":"synaptic transmission, dopaminergic","termid":"GO:0001963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dopamine secretion, neurotransmission","termid":"GO:0061527"}


id: PBO:0073102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 6","termid":"PBO:0073102"}


id: PBO:0085450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to E. coli Hsp31 and S. cerevisiae Hsp31p, Hsp32p, and Sno4p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer","termid":"PBO:0085450"}


id: PBO:0038591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAD9 divergent transcript","termid":"PBO:0038591"}


id: GO:0036407
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mycolic acid-rich cell outer membrane containing a lipid bilayer and long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network. Found in mycobacteria and related genera (e.g. corynebacteria).","definition_xrefs":["GOC:das","PMID:18316738","GOC:bf","PMID:18567661","GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mycolate outer membrane","synonyms":[{"name":"MOM","type":"exact"},{"name":"mycobacterial outer membrane","type":"exact"},{"name":"mycomembrane","type":"exact"}],"termid":"GO:0036407"}


id: GO:0061485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a memory T cell population by cell division.","definition_xrefs":["PMID:14647273","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell proliferation","termid":"GO:0061485"}


id: PBO:0066919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 221","termid":"PBO:0066919"}


id: PBO:0048798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha q pseudogene 1","termid":"PBO:0048798"}


id: PBO:0064056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 90","termid":"PBO:0064056"}


id: PBO:0090999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex TPR repeat subunit Tom70","termid":"PBO:0090999"}


id: PBO:0038583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 3","termid":"PBO:0038583"}


id: PBO:0005063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-a","termid":"PBO:0005063"}


id: PBO:0049513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 20","termid":"PBO:0049513"}


id: PBO:0090392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ubiquitin-protein ligase E3 subunit 4","termid":"PBO:0090392"}


id: SO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA that is predicted to be translated and transcribed into a protein by a protein detection algorithm that does not get transcribed in nature.","definition_xrefs":["PMID:21771858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spurious_protein","synonyms":[{"name":"spurious protein","type":"exact"}],"termid":"SO:0002248"}


id: PBO:0044709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10","termid":"PBO:0044709"}


id: PBO:0065986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M pseudogene","termid":"PBO:0065986"}


id: PBO:0055718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leishmanolysin like peptidase","termid":"PBO:0055718"}


id: SO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where there may have been an error in the assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible_assembly_error","synonyms":[{"name":"possible assembly error","type":"exact"}],"termid":"SO:0000702"}


id: PBO:0041330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 88","termid":"PBO:0041330"}


id: FYPO:0001560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular threonine level","secondary_identifiers":["FYPO:0001614"],"synonyms":[{"name":"decreased cellular L-threonine level","type":"exact"},{"name":"decreased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular threonine level during vegetative growth","type":"exact"},{"name":"decreased level of threonine in cell","type":"exact"},{"name":"decreased threonine accumulation","type":"related"},{"name":"reduced cellular threonine level","type":"exact"},{"name":"reduced level of threonine in cell","type":"exact"}],"termid":"FYPO:0001560"}


id: PBO:0043745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7B","termid":"PBO:0043745"}


id: PBO:0047434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 5","termid":"PBO:0047434"}


id: PBO:0085097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear polyadenylated RNA-binding protein; required for nuclear mRNA export and poly(A) tail length control; stimulates RNA polymerase III transcription by enhancing TFIIIB binding to promoters; dimerizes upon RNA binding; protects mRNA against decay by nuclear exosome in a poly(A)-tail-dependent manner; involved in forming export-competent mRNPs in the nucleus; autoregulates mRNA levels; NLS binds Kap104p; protein abundance increases under DNA replication stress; related to human hnRNPs","termid":"PBO:0085097"}


id: PBO:0074094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 9","termid":"PBO:0074094"}


id: PBO:0073411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 15","termid":"PBO:0073411"}


id: PBO:0035721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_directionality","termid":"PBO:0035721"}


id: PBO:0038905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor D2","termid":"PBO:0038905"}


id: PBO:0065583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 7 (inactive)","termid":"PBO:0065583"}


id: GO:0140537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function regulator that increases the activity of a transcription regulator via direct binding and/or post-translational modification.","definition_xrefs":["PMID:9597751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"transcription regulator activator activity","termid":"GO:0140537"}


id: FYECO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which iron trichloride was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl3","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron trichloride added","type":"exact"},{"name":"iron(III) chloride","type":"exact"}],"termid":"FYECO:0000281"}


id: FYPO:0002643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clotrimazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on clotrimazole","synonyms":[{"name":"normal cell population growth in presence of clotrimazole","type":"exact"},{"name":"normal cell population growth on clotrimazole","type":"exact"},{"name":"normal cellular response to clotrimazole","type":"related"},{"name":"normal vegetative cell population growth on clotrimazole","type":"exact"}],"termid":"FYPO:0002643"}


id: FYPO:0007736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is altered such that more of the protein is present at the 5' end, and less at the 3' end, than normal during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"condensin displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"decreased protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase with increased localization towards 5' end","type":"exact"},{"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase during metaphase of mitotic cell cycle","type":"exact"},{"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase during vegetative growth","type":"exact"},{"name":"protein displaced from downstream end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007736"}


id: GO:0031025
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97799],"is_not":false,"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"The process in which the equatorial microtubule organizing center is disassembled at the end of mitosis.","definition_xrefs":["PMID:15068790","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"equatorial microtubule organization","termid":"GO:0031121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"equatorial microtubule organizing center disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organising center disassembly","type":"exact"}],"termid":"GO:0031025","terms_by_termid":{"GO:0031025":null}}


id: PBO:0034038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_plasma_membrane_part","termid":"PBO:0034038"}


id: GO:0097170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ADP-L-glycero-beta-D-manno-heptose metabolic process","synonyms":[{"name":"ADP-L-glycero-beta-D-manno-heptose metabolism","type":"exact"}],"termid":"GO:0097170"}


id: GO:0160046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + oxalate(in) = chloride(in) + oxalate(out).","definition_xrefs":["PMID:17442754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"oxalate transmembrane transporter activity","termid":"GO:0019531"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"oxalate:chloride antiporter activity","termid":"GO:0160046"}


id: FYPO:0004322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a smaller portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PMID:18493607","GO:0034080","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"decreased extent of CENP-A containing nucleosome","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased spatial extent of CENP-A deposition","type":"related"},{"name":"decreased spatial extent of CENP-A loading","type":"related"},{"name":"decreased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"decreased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced spatial extent of CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0004322"}


id: PBO:0079753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UCKL1 antisense RNA 1","termid":"PBO:0079753"}


id: PBO:0069843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1129, pseudogene","termid":"PBO:0069843"}


id: PBO:0088367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arv1-like family protein Arv1","termid":"PBO:0088367"}


id: PBO:0038794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 1A (pseudogene)","termid":"PBO:0038794"}


id: GO:0045454
data:
  {"annotated_genes":["SJAG_04953","SJAG_01199","SJAG_00668","SJAG_00614","SJAG_03166","SJAG_03653","SJAG_02515","SJAG_03623","SJAG_01162","SJAG_04632","SJAG_01216","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70425,73035,75139,77855,78208,78248,78302,85152,95510,95665,98325,104184],"is_not":false,"summary":null,"term":"GO:0045454"}]},"cv_name":"biological_process","definition":"Any process that maintains the redox environment of a cell or compartment within a cell.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00614":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04632":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell redox homeostasis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0030503","GO:0045868","Wikipedia:Redox","GO:0045867"],"synonyms":[{"name":"regulation of cell redox homeostasis","type":"related"},{"name":"regulation of redox homeostasis","type":"broad"}],"termid":"GO:0045454","terms_by_termid":{"GO:0045454":null}}


id: PBO:0091810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for Stationary phase Viability","termid":"PBO:0091810"}


id: PBO:0005418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DBF type","termid":"PBO:0005418"}


id: PBO:0066723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 20","termid":"PBO:0066723"}


id: PBO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.16","termid":"PBO:0004067"}


id: PBO:0073616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SID1 transmembrane family member 2","termid":"PBO:0073616"}


id: PBO:0071225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 66","termid":"PBO:0071225"}


id: GO:1990719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two microtubules present in the axonemal central pair. It is distinguishable from the C2 axonemal microtubule (also called C2 tubule) by the presence of differing protein components of the projections.","definition_xrefs":["GOC:cilia","PMID:9295136","PMID:21586547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal central pair","termid":"GO:0097540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"C1 axonemal microtubule","synonyms":[{"name":"C1 tubule","type":"broad"}],"termid":"GO:1990719"}


id: GO:0050893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural process required for an organism to sense and interpret the dimensions of a sensory experience: modality, location, intensity and affect.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognition","termid":"GO:0050890"},{"relation_name":"part_of","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory processing","termid":"GO:0050893"}


id: GO:1905475
data:
  {"annotated_genes":["SJAG_03970","SJAG_00030","SJAG_04597","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[90035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[91453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[100088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to membrane.","definition_xrefs":["PMID:26911690","GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation in membrane","type":"exact"},{"name":"regulation of protein localization in membrane","type":"exact"}],"termid":"GO:1905475","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null,"GO:1903078":null}}


id: GO:1905406
data:
  {"annotated_genes":["SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102789],"is_not":false,"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cohesin loading.","definition_xrefs":["PMID:26687354","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cohesin loading","termid":"GO:1905309"},{"relation_name":"is_a","term_name":"regulation of mitotic cohesin loading","termid":"GO:1905405"},{"relation_name":"positively_regulates","term_name":"mitotic cohesin loading","termid":"GO:0061780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cohesin loading","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905406","terms_by_termid":{"GO:1905406":null}}


id: GO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-matrix adhesion","termid":"GO:0001952"}


id: PBO:0025470
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sapk INteracting protein","termid":"PBO:0025470"}


id: PBO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF185 protein, mitochondrial","termid":"PBO:0001339"}


id: GO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.","definition_xrefs":["EC:1.1.5.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:RXN-15745","Reactome:R-HSA-188467","RHEA:18977"],"synonyms":[{"name":"FAD-dependent glycerol-3-phosphate dehydrogenase","type":"related"},{"name":"L-glycerophosphate dehydrogenase activity","type":"related"},{"name":"flavin-linked glycerol-3-phosphate dehydrogenase","type":"related"},{"name":"glycerol-3-phosphate CoQ reductase","type":"related"},{"name":"glycerophosphate dehydrogenase activity","type":"related"},{"name":"sn-glycerol-3-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0004368"}


id: GO:1990232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of phosphomannomutase activity.","definition_xrefs":["GOC:bhm","PMID:16540464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase complex","termid":"GO:1990233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"phosphomannomutase complex","synonyms":[{"name":"PMM-1 complex","type":"narrow"},{"name":"PMM-1 dimer","type":"narrow"},{"name":"PMM-2 complex","type":"narrow"},{"name":"PMM-2 dimer","type":"narrow"}],"termid":"GO:1990232"}


id: GO:1904109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholesterol import.","definition_xrefs":["PMID:16772292","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"regulation of cholesterol import","termid":"GO:0060620"},{"relation_name":"positively_regulates","term_name":"cholesterol import","termid":"GO:0070508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cholesterol import","synonyms":[{"name":"activation of cholesterol import","type":"narrow"},{"name":"activation of cholesterol uptake","type":"narrow"},{"name":"positive regulation of cholesterol uptake","type":"exact"},{"name":"up regulation of cholesterol import","type":"exact"},{"name":"up regulation of cholesterol uptake","type":"exact"},{"name":"up-regulation of cholesterol import","type":"exact"},{"name":"up-regulation of cholesterol uptake","type":"exact"},{"name":"upregulation of cholesterol import","type":"exact"},{"name":"upregulation of cholesterol uptake","type":"exact"}],"termid":"GO:1904109"}


id: PBO:0085275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal integral membrane protein; involved in negative regulation of peroxisome size; partially functionally redundant with Pex31p; genetic interactions suggest action at a step downstream of steps mediated by Pex28p and Pex29p","termid":"PBO:0085275"}


id: PBO:0074137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A2","termid":"PBO:0074137"}


id: PBO:0079090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-3","termid":"PBO:0079090"}


id: _global:capable_of_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","secondary_identifiers":["RO:0002216"],"termid":"_global:capable_of_part_of"}


id: PBO:0057739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1469","termid":"PBO:0057739"}


id: GO:0086011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization","termid":"GO:0086009"},{"relation_name":"part_of","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during action potential","termid":"GO:0086011"}


id: FYPO:0006040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubules attached to the kinetochore lengthen instead of shortening during mitotic metaphase chromosome recapture.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal kinetochore microtubule polymerization during mitotic metaphase chromosome recapture","synonyms":[{"name":"abnormal kinetochore microtubule polymerization during chromosome recapture during mitosis","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during mitotic metaphase kinetochore retrieval","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006040"}


id: PBO:0057560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 711","termid":"PBO:0057560"}


id: GO:0120281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that surrounds an autolysosome, a single-membrane-bounded vesicle in which endogenous cellular material is degraded.","definition_xrefs":["PMID:24657946","PMID:26382870","PMID:32047650","GOC:krc","PMID:17182262","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagosome membrane","termid":"GO:0000421"},{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"part_of","term_name":"autolysosome","termid":"GO:0044754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"autolysosome membrane","termid":"GO:0120281"}


id: GO:0071304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B6 stimulus. Vitamin B6 encompasses pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B6","termid":"GO:0034516"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B6","termid":"GO:0071304"}


id: PBO:0074603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11D","termid":"PBO:0074603"}


id: PBO:0058713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6841","termid":"PBO:0058713"}


id: GO:0075116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075116)","synonyms":[{"name":"activation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"positive regulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host transmembrane receptor-mediated cAMP signaling","type":"exact"},{"name":"promotion by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"stimulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"upregulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"}],"termid":"GO:0075116"}


id: PBO:0070762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 18","termid":"PBO:0070762"}


id: GO:1903071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:rph","GO_REF:0000058","PMID:17872946"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903071)","termid":"GO:1903071"}


id: PBO:0004690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal export complex protein Arx1, peptidase family (predicted)","termid":"PBO:0004690"}


id: GO:0021933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The inward migration of postmitotic granule cells along a radial glial cell from the external granule layer to the internal granule cell layer.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid","GOC:dph","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia guided migration of cerebellar granule cell","termid":"GO:0021933"}


id: FYPO:0000849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the cytoplasm of a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased cytoplasmic protein level during vegetative growth","synonyms":[{"name":"cytoplasmic accumulation of protein","type":"exact"},{"name":"cytoplasmic protein accumulation during vegetative growth","type":"exact"},{"name":"increased cytoplasmic protein level during mitotic cell cycle","type":"related"},{"name":"increased protein level in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0000849"}


id: GO:0102141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + [chondroitin-sulfate]-beta-D-glucuronate = adenosine 3',5'-bismonophosphate + [chondroitin-sulfate]-2-O-sulfo-beta-D-glucuronate.","definition_xrefs":["GOC:pz","EC:2.8.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"[chondroitin sulfate]-D-glucuronyl 2-O-sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-11560"],"termid":"GO:0102141"}


id: PBO:0091017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase Pud1","termid":"PBO:0091017"}


id: PBO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centlein","termid":"PBO:0043491"}


id: GO:0018891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclohexanol, the monohydroxy derivative of cyclohexane. It is used as a solvent and blending agent.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclohexanol metabolic process","secondary_identifiers":["UM-BBD_pathwayID:chx"],"synonyms":[{"name":"cyclohexanol metabolism","type":"exact"}],"termid":"GO:0018891"}


id: PBO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sulfide_level","termid":"PBO:0030285"}


id: GO:0008477
data:
  {"annotated_genes":["SJAG_00957","SJAG_01781","SJAG_02179","SJAG_04927"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74683,107447],"is_not":false,"summary":null,"term":"GO:0008477"},{"annotations":[94141,94140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106432"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a N-D-ribosylpurine + H2O = a purine + D-ribose.","definition_xrefs":["EC:3.2.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01781":null,"SJAG_02179":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"purine nucleosidase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["RHEA:23344","MetaCyc:PURINE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"IAG-NH activity","type":"related"},{"name":"IAG-nucleoside hydrolase activity","type":"related"},{"name":"N-D-ribosylpurine ribohydrolase activity","type":"related"},{"name":"N-ribosyl purine ribohydrolase activity","type":"related"},{"name":"inosine-adenosine-guanosine preferring nucleoside hydrolase activity","type":"narrow"},{"name":"nucleosidase activity","type":"broad"},{"name":"nucleosidase g activity","type":"narrow"},{"name":"nucleoside hydrolase activity","type":"broad"},{"name":"purine beta-ribosidase activity","type":"related"},{"name":"purine nucleosidase reaction","type":"exact"},{"name":"purine nucleoside hydrolase activity","type":"related"},{"name":"purine ribonucleosidase activity","type":"related"},{"name":"purine-nucleoside ribohydrolase activity","type":"related"},{"name":"purine-specific nucleoside N-ribohydrolase activity","type":"related"},{"name":"ribonucleoside hydrolase activity","type":"related"}],"termid":"GO:0008477","terms_by_termid":{"GO:0008477":null,"GO:0106432":null}}


id: GO:2000880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dipeptide transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dipeptide transport","termid":"GO:0090089"},{"relation_name":"is_a","term_name":"positive regulation of oligopeptide transport","termid":"GO:2000878"},{"relation_name":"positively_regulates","term_name":"dipeptide transport","termid":"GO:0042938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of dipeptide transport","termid":"GO:2000880"}


id: GO:0050478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5,6,7,8-tetrahydrobiopterin + anthranilate + O2 = 3-hydroxyanthranilate + 7,8-dihydrobiopterin + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete anthranilate 3-monooxygenase activity (obsolete GO:0050478)","synonyms":[{"name":"anthranilate 3-hydroxylase activity","type":"exact"},{"name":"anthranilate,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"anthranilic acid hydroxylase activity","type":"broad"}],"termid":"GO:0050478"}


id: FYPO:0008087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the nucleus during nitrogen starvation is decreased.","definition_xrefs":["PMID:37191320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleophagy during nitrogen starvation","termid":"FYPO:0008087"}


id: GO:0048017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses an inositol-containing lipid to convert a signal into a response. Inositol lipids include the phosphoinositides (phosphatidylinositol and its phosphorylated derivatives), ceramides containing inositol, and inositol glycolipids.","definition_xrefs":["GOC:ceb","PMID:16088939","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol lipid-mediated signaling (obsolete GO:0048017)","synonyms":[{"name":"inositol lipid-mediated signal transduction","type":"exact"},{"name":"inositol lipid-mediated signalling","type":"exact"},{"name":"inositol phospholipid-mediated signaling","type":"narrow"}],"termid":"GO:0048017"}


id: GO:0008233
data:
  {"annotated_genes":["SJAG_03396","SJAG_00730","SJAG_02776","SJAG_16454","SJAG_03586","SJAG_03420","SJAG_02214","SJAG_00181","SJAG_02397","SJAG_03429","SJAG_00087","SJAG_00975","SJAG_04583","SJAG_04641","SJAG_04357","SJAG_04533","SJAG_01285","SJAG_04858","SJAG_02341","SJAG_01014","SJAG_03258","SJAG_01816","SJAG_00984","SJAG_03672","SJAG_01281","SJAG_04306","SJAG_04888","SJAG_00778","SJAG_04538","SJAG_00764","SJAG_03009","SJAG_02260","SJAG_05351","SJAG_00762","SJAG_04497","SJAG_00451","SJAG_01838","SJAG_02419","SJAG_01283","SJAG_01612","SJAG_00742","SJAG_01321","SJAG_01136","SJAG_01528","SJAG_02900","SJAG_05278","SJAG_00128","SJAG_03147","SJAG_02244","SJAG_02117","SJAG_00125","SJAG_02565","SJAG_04398","SJAG_00969","SJAG_00966","SJAG_01312","SJAG_04514","SJAG_03393","SJAG_03763","SJAG_00720","SJAG_01481","SJAG_00776","SJAG_02562","SJAG_01088","SJAG_03299","SJAG_02774","SJAG_03151","SJAG_02502","SJAG_03022","SJAG_02809","SJAG_01004","SJAG_05286","SJAG_01768","SJAG_03744","SJAG_03910","SJAG_05316","SJAG_04928","SJAG_00406","SJAG_01868","SJAG_04994","SJAG_02033","SJAG_03686","SJAG_03752","SJAG_00135","SJAG_04541","SJAG_00846","SJAG_03407","SJAG_00644","SJAG_00795","SJAG_05977","SJAG_00109","SJAG_04651","SJAG_01542","SJAG_00479","SJAG_03261","SJAG_00737","SJAG_03648","SJAG_04103","SJAG_02503","SJAG_03292","SJAG_00662","SJAG_00808","SJAG_04819","SJAG_04215","SJAG_04969","SJAG_00573","SJAG_02542","SJAG_00546","SJAG_01968","SJAG_04229","SJAG_03121","SJAG_03316","SJAG_04785","SJAG_06636","SJAG_01430","SJAG_01179","SJAG_00784","SJAG_00254","SJAG_02432","SJAG_01896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84773,94949],"is_not":false,"summary":null,"term":"GO:0008233"},{"annotations":[90338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042500"},{"annotations":[60090,75242,93960,71818,70243,78513,72933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004190"},{"annotations":[72307,106291,77125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004176"},{"annotations":[73953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008798"},{"annotations":[72803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004180"},{"annotations":[77112,75627,76438,84150,73901,107041,106425,101212,106982,101048,110035,89049,75958,108867,89769,110379,109545,110447,93584,111143,100053,75581,84271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004843"},{"annotations":[87289,112712,73675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004197"},{"annotations":[104346,100701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008234"},{"annotations":[71241,75384,90903,105649,77743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019784"},{"annotations":[70184,85993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016929"},{"annotations":[71513,95612,106009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101005"},{"annotations":[70392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008239"},{"annotations":[92051,97373,107043,91821,95266,106441,106681,84292,109869,88990,111144,112961,110758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004175"},{"annotations":[93928,94742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"},{"annotations":[83247,87069,87876,109193,99159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003923"},{"annotations":[98734,105368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004239"},{"annotations":[84151,106983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990380"},{"annotations":[92130,77897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061578"},{"annotations":[110036,95382,91987,101049,84272,111145,110448,100054,87309,90904,108868,107044,105650,92131,89770,101213,110381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140492"},{"annotations":[84033,72776,98736,89034,109684,93410,84279,73887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"},{"annotations":[62079,90095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[97735,92329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"},{"annotations":[103449,70251,77129,70159,100996,74331,113823,76396,104540,111832,75120,76510,77055,92907,93868,75856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004222"},{"annotations":[111390,109446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008235"},{"annotations":[106010,93585,110370,94359,102366,109875,75383,95613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008237"},{"annotations":[75643,78094,74923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[87276,74377,88910,73934,75381,99270,74903,78224,113537,76416,103450,104541,96798,99276,89790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[84895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008236"},{"annotations":[101540,74272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"},{"annotations":[93274,73956,106028,89635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004298"},{"annotations":[73648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.","definition_xrefs":["ISBN:0815332181","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":120,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00109":null,"SJAG_00125":null,"SJAG_00128":null,"SJAG_00135":null,"SJAG_00181":null,"SJAG_00254":null,"SJAG_00406":null,"SJAG_00451":null,"SJAG_00479":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00644":null,"SJAG_00662":null,"SJAG_00720":null,"SJAG_00730":null,"SJAG_00737":null,"SJAG_00742":null,"SJAG_00762":null,"SJAG_00764":null,"SJAG_00776":null,"SJAG_00778":null,"SJAG_00784":null,"SJAG_00795":null,"SJAG_00808":null,"SJAG_00846":null,"SJAG_00966":null,"SJAG_00969":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01004":null,"SJAG_01014":null,"SJAG_01088":null,"SJAG_01136":null,"SJAG_01179":null,"SJAG_01281":null,"SJAG_01283":null,"SJAG_01285":null,"SJAG_01312":null,"SJAG_01321":null,"SJAG_01430":null,"SJAG_01481":null,"SJAG_01528":null,"SJAG_01542":null,"SJAG_01612":null,"SJAG_01768":null,"SJAG_01816":null,"SJAG_01838":null,"SJAG_01868":null,"SJAG_01896":null,"SJAG_01968":null,"SJAG_02033":null,"SJAG_02117":null,"SJAG_02214":null,"SJAG_02244":null,"SJAG_02260":null,"SJAG_02341":null,"SJAG_02397":null,"SJAG_02419":null,"SJAG_02432":null,"SJAG_02502":null,"SJAG_02503":null,"SJAG_02542":null,"SJAG_02562":null,"SJAG_02565":null,"SJAG_02774":null,"SJAG_02776":null,"SJAG_02809":null,"SJAG_02900":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03121":null,"SJAG_03147":null,"SJAG_03151":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03292":null,"SJAG_03299":null,"SJAG_03316":null,"SJAG_03393":null,"SJAG_03396":null,"SJAG_03407":null,"SJAG_03420":null,"SJAG_03429":null,"SJAG_03586":null,"SJAG_03648":null,"SJAG_03672":null,"SJAG_03686":null,"SJAG_03744":null,"SJAG_03752":null,"SJAG_03763":null,"SJAG_03910":null,"SJAG_04103":null,"SJAG_04215":null,"SJAG_04229":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04398":null,"SJAG_04497":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04538":null,"SJAG_04541":null,"SJAG_04583":null,"SJAG_04641":null,"SJAG_04651":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04858":null,"SJAG_04888":null,"SJAG_04928":null,"SJAG_04969":null,"SJAG_04994":null,"SJAG_05278":null,"SJAG_05286":null,"SJAG_05316":null,"SJAG_05351":null,"SJAG_05977":null,"SJAG_06636":null,"SJAG_16454":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-5655483","Reactome:R-HSA-3065959","EC:3.4.-.-","Reactome:R-HSA-3065958","Reactome:R-HSA-3000243","Reactome:R-HSA-205112","Reactome:R-HSA-3139027","Reactome:R-HSA-3000263","GO:0070011","Reactome:R-HSA-5685902","Reactome:R-HSA-376149","Reactome:R-HSA-4167501","Reactome:R-HSA-6803060","Reactome:R-HSA-5684864","Reactome:R-HSA-448678","GO:0070010"],"synonyms":[{"name":"hydrolase, acting on peptide bonds","type":"exact"},{"name":"peptidase activity, acting on D-amino acid peptides","type":"narrow"},{"name":"peptidase activity, acting on L-amino acid peptides","type":"narrow"},{"name":"peptide hydrolase activity","type":"exact"},{"name":"protease activity","type":"exact"},{"name":"proteinase activity","type":"narrow"}],"termid":"GO:0008233","terms_by_termid":{"GO:0003923":null,"GO:0004175":null,"GO:0004176":null,"GO:0004180":null,"GO:0004181":null,"GO:0004185":null,"GO:0004190":null,"GO:0004197":null,"GO:0004222":null,"GO:0004239":null,"GO:0004252":null,"GO:0004298":null,"GO:0004843":null,"GO:0008233":null,"GO:0008234":null,"GO:0008235":null,"GO:0008236":null,"GO:0008237":null,"GO:0008239":null,"GO:0008240":null,"GO:0008798":null,"GO:0016929":null,"GO:0019784":null,"GO:0036374":null,"GO:0042500":null,"GO:0061578":null,"GO:0070006":null,"GO:0070139":null,"GO:0070573":null,"GO:0101005":null,"GO:0140492":null,"GO:1990380":null}}


id: PBO:0075465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 17","termid":"PBO:0075465"}


id: GO:0009574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense band of microtubules, 1-3 pm wide, that appears just beneath the cell membrane before the start of cell division in the cells of higher plants. It precedes the onset of prophase and then disappears as mitosis begins, yet it somehow determines the plane of orientation of the new cell plate forming in late telophase and marks the zone of the parental cell wall where fusion with the growing cell plate ultimately occurs.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"preprophase band","secondary_identifiers":["Wikipedia:Preprophase_band"],"termid":"GO:0009574"}


id: GO:0047460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-amino-4-chloropent-4-enoate + H2O = 2-oxopent-4-enoate + chloride + H+ + NH4.","definition_xrefs":["EC:4.5.1.4","RHEA:11620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"L-2-amino-4-chloropent-4-enoate dehydrochlorinase activity","secondary_identifiers":["MetaCyc:4.5.1.4-RXN","KEGG_REACTION:R02605"],"synonyms":[{"name":"L-2-amino-4-chloro-4-pentenoate dehalogenase activity","type":"related"},{"name":"L-2-amino-4-chloropent-4-enoate chloride-lyase (adding H2O; deaminating; 2-oxopent-4-enoate-forming)","type":"related"},{"name":"L-2-amino-4-chloropent-4-enoate chloride-lyase (deaminating)","type":"related"}],"termid":"GO:0047460"}


id: FYPO:0000917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal citrate (Si)-synthase activity","synonyms":[{"name":"abnormal citrate synthase activity","type":"broad"}],"termid":"FYPO:0000917"}


id: PATO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001210 plane_angle_quantity (obsolete PATO:0001210)","termid":"PATO:0001210"}


id: GO:0150165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated inhibition of transcription by RNA polymerase II (obsolete GO:0150165)","termid":"GO:0150165"}


id: PBO:0043613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 1","termid":"PBO:0043613"}


id: GO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The RNA metabolic process that joins two exons, each of which has free ends that were generated by endonucleolytic cleavages, by a ligation reaction.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"},{"relation_name":"part_of","term_name":"RNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA exon ligation","termid":"GO:0000378"}


id: PBO:0027701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_chromatin_organization_resulting_in_peripheral_chromatin_distribution","termid":"PBO:0027701"}


id: PBO:0057112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200a","termid":"PBO:0057112"}


id: PBO:0046433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 3","termid":"PBO:0046433"}


id: PBO:0054955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2369","termid":"PBO:0054955"}


id: FYECO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ leu","synonyms":[{"name":"leucine added","type":"exact"}],"termid":"FYECO:0000226"}


id: PBO:0053947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1250","termid":"PBO:0053947"}


id: PBO:0068609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 60, pseudogene","termid":"PBO:0068609"}


id: PBO:0075070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 119","termid":"PBO:0075070"}


id: PBO:0084171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to chromosomes; functionally redundant with Nhp6Bp; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6A has a paralog, NHP6B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084171"}


id: PBO:0057784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3064","termid":"PBO:0057784"}


id: GO:1905828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["PMID:12432938","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin catabolic process","synonyms":[{"name":"regulation of prostaglandin breakdown","type":"exact"},{"name":"regulation of prostaglandin catabolism","type":"exact"},{"name":"regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905828"}


id: PBO:0031116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mutator","termid":"PBO:0031116"}


id: PATO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a short and stout cylindrical shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peg-like","termid":"PATO:0002535"}


id: FYPO:0002384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 5, 8, 12 and 16 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23851719"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere outer repeat during vegetative growth (obsolete FYPO:0002384)","synonyms":[{"name":"increased histone H4 acetylation (K5, K8, K12 and K16) at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5/8/12/16 acetylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H4K5, H4K8, H4K12 and H4K16 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002384"}


id: GO:1903779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:rph","PMID:12967627","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac conduction","termid":"GO:1903779"}


id: PBO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase Oct1 (predicted)","termid":"PBO:0000499"}


id: SO:1000086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a decrease in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000086 sequence_variation_decreasing_level_of_transcript (obsolete SO:1000086)","synonyms":[{"name":"mutation decreasing level of transcript","type":"exact"},{"name":"sequence variation decreasing level of transcript","type":"related"}],"termid":"SO:1000086"}


id: GO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone phosphorylation (obsolete GO:0016572)","termid":"GO:0016572"}


id: GO:0015349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of thyroid hormones from one side of a membrane to the other. Thyroid hormone are any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"thyroid hormone transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-879575","Reactome:R-HSA-9631987"],"termid":"GO:0015349"}


id: PBO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 71","termid":"PBO:0071069"}


id: GO:0021960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum.","definition_xrefs":["GOC:cls","GOC:dgh","ISBN:0878937420","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior commissure morphogenesis","termid":"GO:0021960"}


id: PBO:0088674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Rod1","termid":"PBO:0088674"}


id: PBO:0090910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine ammonia-lyase activity","termid":"PBO:0090910"}


id: PBO:0077179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 3","termid":"PBO:0077179"}


id: GO:1900304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"negatively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of laminaritriose transport","synonyms":[{"name":"down regulation of laminaritriose transport","type":"exact"},{"name":"down-regulation of laminaritriose transport","type":"exact"},{"name":"downregulation of laminaritriose transport","type":"exact"},{"name":"inhibition of laminaritriose transport","type":"narrow"}],"termid":"GO:1900304"}


id: GO:1901072
data:
  {"annotated_genes":["SJAG_00620","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87433,97013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosamine-containing compounds (glucosamines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucosamine-containing compound breakdown","type":"exact"},{"name":"glucosamine-containing compound catabolism","type":"exact"},{"name":"glucosamine-containing compound degradation","type":"exact"},{"name":"glucosamines breakdown","type":"exact"},{"name":"glucosamines catabolic process","type":"exact"},{"name":"glucosamines catabolism","type":"exact"},{"name":"glucosamines degradation","type":"exact"}],"termid":"GO:1901072","terms_by_termid":{"GO:0034232":null}}


id: PBO:0054763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2175","termid":"PBO:0054763"}


id: PBO:0074714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75","termid":"PBO:0074714"}


id: GO:1905801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27930654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of intraciliary retrograde transport","termid":"GO:1905799"},{"relation_name":"positively_regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intraciliary retrograde transport","synonyms":[{"name":"activation of intraciliary retrograde transport","type":"narrow"},{"name":"activation of intraflagellar retrograde transport","type":"narrow"},{"name":"positive regulation of intraflagellar retrograde transport","type":"exact"},{"name":"up regulation of intraciliary retrograde transport","type":"exact"},{"name":"up regulation of intraflagellar retrograde transport","type":"exact"},{"name":"up-regulation of intraciliary retrograde transport","type":"exact"},{"name":"up-regulation of intraflagellar retrograde transport","type":"exact"},{"name":"upregulation of intraciliary retrograde transport","type":"exact"},{"name":"upregulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905801"}


id: GO:0071614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts linoleic acid to a cis-epoxyoctadecenoic acid.","definition_xrefs":["PMID:11042099","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"linoleic acid epoxygenase activity","synonyms":[{"name":"linoleic acid monooxygenase activity","type":"exact"}],"termid":"GO:0071614"}


id: GO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 galanin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 galanin receptor binding","synonyms":[{"name":"type 2 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031765"}


id: GO:0097050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a type B pancreatic cell, a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["CL:0000169","GOC:mtg_apoptosis","PMID:16087305","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell apoptotic process","synonyms":[{"name":"pancreatic B cell apoptosis","type":"exact"},{"name":"pancreatic beta cell apoptosis","type":"exact"},{"name":"type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:0097050"}


id: PBO:0079459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog A","termid":"PBO:0079459"}


id: PBO:0087841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine deaminase, catalyzes first step in isoleucine biosynthesis; expression is under general amino acid control; ILV1 locus exhibits highly positioned nucleosomes whose organization is independent of known ILV1 regulation","termid":"PBO:0087841"}


id: PBO:0003567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unsupported by transcription data","termid":"PBO:0003567"}


id: PBO:0062578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 2","termid":"PBO:0062578"}


id: PBO:0030989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleosome_positioning","termid":"PBO:0030989"}


id: PBO:0072802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 1","termid":"PBO:0072802"}


id: GO:0000421
data:
  {"annotated_genes":["SJAG_02414","SJAG_06309"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85807,108883],"is_not":false,"summary":null,"term":"GO:0000421"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an autophagosome, a double-membrane-bounded vesicle in which endogenous cellular material is sequestered.","definition_xrefs":["GOC:isa_complete","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"part_of","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02414":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"autophagosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"autophagic vacuole membrane","type":"exact"}],"termid":"GO:0000421","terms_by_termid":{"GO:0000421":null}}


id: PBO:0044690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDR1 divergent transcript","termid":"PBO:0044690"}


id: PBO:0082231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha' catalytic subunit of casein kinase 2 (CK2); CK2 is a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; protein abundance increases in response to DNA replication stress; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082231"}


id: PBO:0061599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of ubiquitin like proteins 1","termid":"PBO:0061599"}


id: GO:0007341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of zona pellucida","termid":"GO:0007341"}


id: GO:0009655
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigment-protein complex primarily associated to PSII in higher plants, green algae and cyanobacteria that directly transfers electrons to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, core complex","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIId subcomplex","type":"narrow"}],"termid":"GO:0009655"}


id: PBO:0038622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 3","termid":"PBO:0038622"}


id: PBO:0079744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 11","termid":"PBO:0079744"}


id: PBO:0084610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YGL210W-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL211W","termid":"PBO:0084610"}


id: GO:0102789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + cyanidin = H+ + cyanidin 5-O-beta-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"UDP-D-glucose:cyanidin 5-O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8005"],"termid":"GO:0102789"}


id: GO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A extracellular matrix complex involved in cell adhesion and cell migration. Typically homotrimeric or homohexameric. In mammals, four complexes exist: Tenascin-C, Tenascin-N (also known as Tenascin-W), Tenascin-X and Tenascin-R.","definition_xrefs":["PMID:12845616","GOC:bhm","PMID:17909022","PMID:11731446","PMID:23658023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tenascin complex","synonyms":[{"name":"Tenascin-C","type":"narrow"},{"name":"Tenascin-N","type":"narrow"},{"name":"Tenascin-R","type":"narrow"},{"name":"Tenascin-W","type":"narrow"},{"name":"Tenascin-X","type":"narrow"}],"termid":"GO:0090733"}


id: PBO:0042302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD9 molecule","termid":"PBO:0042302"}


id: PBO:0047503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 4 (pseudogene)","termid":"PBO:0047503"}


id: PBO:0017498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zn(2)-C6 fungal-type DNA-binding transcription factor, truncated","termid":"PBO:0017498"}


id: SO:0000930
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of guide RNA.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"guide_RNA","termid":"SO:0000602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guide_RNA_region","synonyms":[{"name":"guide RNA region","type":"exact"}],"termid":"SO:0000930"}


id: GO:0090402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oncogene-induced cell senescence","synonyms":[{"name":"OIS","type":"exact"}],"termid":"GO:0090402"}


id: GO:1900951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 18-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900950"},{"relation_name":"is_a","term_name":"negative regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900954"},{"relation_name":"negatively_regulates","term_name":"18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900951"}


id: PBO:0070867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 5","termid":"PBO:0070867"}


id: GO:1903929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a primary palate over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","GOC:mgi_curators","GO_REF:0000094","PMID:25504820","PMID:24644145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary palate development","synonyms":[{"name":"palatum primarium development","type":"related"},{"name":"primary palate process development","type":"exact"},{"name":"primitive palate development","type":"related"},{"name":"processus palatinus medianus development","type":"related"}],"termid":"GO:1903929"}


id: PBO:0009178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sir antagonist","termid":"PBO:0009178"}


id: PBO:0051405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 5","termid":"PBO:0051405"}


id: GO:0071347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-1","termid":"GO:0070555"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-1","synonyms":[{"name":"cellular response to IL-1","type":"exact"}],"termid":"GO:0071347"}


id: FYPO:0002445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in actin cortical patches is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to actin cortical patch","synonyms":[{"name":"ectopic protein localization to actin cortical patch","type":"exact"},{"name":"protein mislocalised to actin cortical patch","type":"exact"},{"name":"protein mislocalised to actin cortical patch during vegetative growth","type":"exact"},{"name":"protein mislocalized to F-actin patch","type":"exact"},{"name":"protein mislocalized to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actin cortical patch during vegetative growth","type":"exact"},{"name":"protein mislocalized to actin patch","type":"exact"}],"termid":"FYPO:0002445"}


id: PBO:0036534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein (RNP) complex Utp502 (predicted)","termid":"PBO:0036534"}


id: GO:0031573
data:
  {"annotated_genes":["SJAG_00327","SJAG_01605","SJAG_03026","SJAG_02563","SJAG_03898","SJAG_00640","SJAG_02771","SJAG_04671","SJAG_01044","SJAG_03048","SJAG_05373","SJAG_01708","SJAG_00364","SJAG_00623","SJAG_00429","SJAG_03160","SJAG_01677","SJAG_04287","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73907,77748,77929,78111,84880,84923,86162,87104,90167,91612,94731,94892,96360,97836,102018,103054,107010,107314,111254],"is_not":false,"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle checkpoint that slows DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progression.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03898":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"mitotic intra-S DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0072428"],"synonyms":[{"name":"S-phase checkpoint","type":"broad"},{"name":"intra-S DNA damage checkpoint","type":"exact"},{"name":"mitotic intra-S DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in intra-S DNA damage checkpoint","type":"exact"}],"termid":"GO:0031573","terms_by_termid":{"GO:0031573":null}}


id: PBO:0048865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 10","termid":"PBO:0048865"}


id: PBO:0053268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A2","termid":"PBO:0053268"}


id: FYPO:0002683
data:
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id: PBO:0087352
data:
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id: SO:0001926
data:
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id: GO:0140784
data:
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id: PBO:0076263
data:
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id: PBO:0072397
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id: GO:0099738
data:
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id: GO:0180009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: basic L-amino acid(in) + neutral L-amino acid(out) = basic L-amino acid(in) + neutral L-amino acid(out).","definition_xrefs":["PMID:23506863","PMID:8663357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"broad specificity neutral L-amino acid:basic L-amino acid antiporter activity","synonyms":[{"name":"neutral L-amino acid:cationic L-amino acid antiporter activit","type":"exact"},{"name":"neutral L-amino acid:dibasic L-amino acid antiporter activity","type":"exact"},{"name":"neutral L-amino acid:positively-charged polar L-amino acid antiporter activity","type":"exact"},{"name":"system b(0,+)-type activity","type":"related"}],"termid":"GO:0180009"}


id: GO:0097450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal process of astrocyte abutting non-neuronal surfaces in the brain.","definition_xrefs":["NIF_Subcellular:sao388182739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte projection","termid":"GO:0097449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"astrocyte end-foot","synonyms":[{"name":"astrocyte endfoot","type":"exact"}],"termid":"GO:0097450"}


id: GO:0014812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a muscle cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["CL:0000187","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell migration","termid":"GO:0014812"}


id: GO:0052228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host protein (obsolete GO:0052228)","termid":"GO:0052228"}


id: PBO:0084368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-interacting protein in SNARE complex assembly machinery; acts at late step in secretion; interacts with membranes through two distinct binding sites; shows genetic and physical interactions with Sec1p; required for prospore membrane formation during sporulation; N-terminus closely associates with plasma membrane, C-terminus colocalizes with Sec4p on intracellular membranes; relocalizes from bud neck to nucleus upon DNA replication stress","termid":"PBO:0084368"}


id: GO:0140545
data:
  {"annotated_genes":["SJAG_04187","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85022,99663],"is_not":false,"summary":null,"term":"GO:0140545"}]},"cv_name":"molecular_function","definition":"An ATP-dependent molecular chaperone activity that mediates the solubilization of ordered protein aggregates.","definition_xrefs":["PMID:26312418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein disaggregase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein disaggregase activity","type":"broad"},{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140545","terms_by_termid":{"GO:0140545":null}}


id: PBO:0047061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A opposite strand","termid":"PBO:0047061"}


id: GO:0030703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the eggshell, a product of the somatic follicle cell epithelium and a structure that supports the egg in a hostile environment, minimizing water loss whilst allowing gas exchanges essential for embryonic respiration.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238","PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eggshell formation","termid":"GO:0030703"}


id: GO:0003274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell-cell adhesion process of mesenchymal cardiac cushion cells that contributes to the process of cushion shaping.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in heart morphogenesis","termid":"GO:0061343"},{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"endocardial cushion fusion","termid":"GO:0003274"}


id: PBO:0042847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 54","termid":"PBO:0042847"}


id: PBO:0052698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 6","termid":"PBO:0052698"}


id: PBO:0057794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-3","termid":"PBO:0057794"}


id: RO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visits_flowers_of","termid":"RO:0002622"}


id: PBO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 3","termid":"PBO:0052585"}


id: PBO:0070229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 165 pseudogene","termid":"PBO:0070229"}


id: FYPO:0006741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at promoters containing one or more MluI cell cycle box factor elements (MCBs). Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:30134042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in euchromatin","termid":"FYPO:0000854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"increased nucleosome occupancy at MCB promoters","synonyms":[{"name":"increased nucleosome occupancy at MCB promoter during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at MCB promoter during vegetative growth","type":"exact"},{"name":"increased nucleosome occupancy at MCB promoters target genes","type":"related"}],"termid":"FYPO:0006741"}


id: PBO:0046374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome associated trafficking regulator 1","termid":"PBO:0046374"}


id: PBO:0056471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 1A","termid":"PBO:0056471"}


id: GO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["ISBN:0878932437","GOC:dph","ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate development","termid":"GO:0001840"}


id: PBO:0040116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 3","termid":"PBO:0040116"}


id: PBO:0077449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 182","termid":"PBO:0077449"}


id: GO:0043796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde + H2O + NADP+ = D-glycerate + NADPH + H+.","definition_xrefs":["EC:1.2.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glyceraldehyde dehydrogenase (NADP) activity","secondary_identifiers":["RHEA:40163"],"termid":"GO:0043796"}


id: PBO:0085780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the endoplasmic reticulum; required for GPI-phospholipase A2 activity that remodels the GPI anchor as a prerequisite for association of GPI-anchored proteins with lipid rafts; functionally complemented by human ortholog PERLD1","termid":"PBO:0085780"}


id: PBO:0004000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin Trx2","termid":"PBO:0004000"}


id: PBO:0030293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-glossy_colony_morphology","termid":"PBO:0030293"}


id: GO:0016255
data:
  {"annotated_genes":["SJAG_05278","SJAG_03292","SJAG_02776","SJAG_03672","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71106,74101,74111,87068,109192],"is_not":false,"summary":null,"term":"GO:0016255"}]},"cv_name":"biological_process","definition":"A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"GPI anchor biosynthetic process","termid":"GO:0006506"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_02776":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0042158"],"is_obsolete":false,"name":"attachment of GPI anchor to protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0016255","terms_by_termid":{"GO:0016255":null}}


id: FYPO:0003393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which electron transport involved in cellular respiration is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal respiratory electron transport","synonyms":[{"name":"abnormal respiratory electron transport chain","type":"exact"},{"name":"abnormal respiratory electron transport during mitotic cell cycle","type":"related"},{"name":"abnormal respiratory electron transport process during vegetative growth","type":"exact"}],"termid":"FYPO:0003393"}


id: PBO:0067513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 654, pseudogene","termid":"PBO:0067513"}


id: GO:1904011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an Aroclor 1254 stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18602130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Aroclor 1254","termid":"GO:1904010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Aroclor 1254","termid":"GO:1904011"}


id: PBO:0060021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 9","termid":"PBO:0060021"}


id: GO:1900370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of post-transcriptional gene silencing by RNA.","definition_xrefs":["GOC:kmv","PMID:22412382","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-transcriptional gene silencing","termid":"GO:0060148"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"positively_regulates","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of post-transcriptional gene silencing by RNA","synonyms":[{"name":"activation of RNA interference","type":"narrow"},{"name":"activation of RNAi","type":"exact"},{"name":"positive regulation of PTGS","type":"exact"},{"name":"positive regulation of RNA interference","type":"exact"},{"name":"positive regulation of RNAi","type":"exact"},{"name":"up regulation of RNA interference","type":"exact"},{"name":"up regulation of RNAi","type":"exact"},{"name":"up-regulation of RNA interference","type":"exact"},{"name":"up-regulation of RNAi","type":"exact"},{"name":"upregulation of RNA interference","type":"exact"},{"name":"upregulation of RNAi","type":"exact"}],"termid":"GO:1900370"}


id: PBO:0029476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shortened_telomeres","termid":"PBO:0029476"}


id: PBO:0066454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 6, pseudogene","termid":"PBO:0066454"}


id: PBO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 4","termid":"PBO:0048538"}


id: GO:0106312
data:
  {"annotated_genes":["SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93971],"is_not":false,"summary":null,"term":"GO:0106312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydrofolate + NAD + = 5,10-methylenetetrahydrofolate + NADH + H+.","definition_xrefs":["RHEA:19821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:0004489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase NADH activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106312","terms_by_termid":{"GO:0106312":null}}


id: PBO:0049863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase B","termid":"PBO:0049863"}


id: GO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.","definition_xrefs":["GOC:rb","PMID:11238902","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:0090580"}


id: FYPO:0005788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased gene conversion during vegetative growth","synonyms":[{"name":"increased gene conversion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005788"}


id: GO:2000154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of flagellar cell motility.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of flagellar cell motility (obsolete GO:2000154)","synonyms":[{"name":"negative regulation of flagellar cell motility","type":"exact"}],"termid":"GO:2000154"}


id: GO:0021784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the postganglionic portion of the parasympathetic fiber over time, from its formation to the mature structure. The parasympathetic fiber is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system development","termid":"GO:0048483"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postganglionic parasympathetic fiber development","termid":"GO:0021784"}


id: PBO:0065618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 phosphatase activator","termid":"PBO:0065618"}


id: PATO:0000930
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000930 light_quality sensitivity (obsolete PATO:0000930)","termid":"PATO:0000930"}


id: PR:P41838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rae1 gene.","definition_xrefs":["UniProtKB:P41838","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)+ RNA export protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.05c","synonyms":[{"name":"Spom972h-rae1","type":"exact"}],"termid":"PR:P41838"}


id: PBO:0063238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 3","termid":"PBO:0063238"}


id: GO:0045937
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"positively_regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of phosphate metabolic process","type":"narrow"},{"name":"positive regulation of phosphate metabolism","type":"exact"},{"name":"stimulation of phosphate metabolic process","type":"narrow"},{"name":"up regulation of phosphate metabolic process","type":"exact"},{"name":"up-regulation of phosphate metabolic process","type":"exact"},{"name":"upregulation of phosphate metabolic process","type":"exact"}],"termid":"GO:0045937","terms_by_termid":{"GO:1905857":null}}


id: PR:Q09862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29E6.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29E6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.09","synonyms":[{"name":"Spom972h-SPAC29E6.09","type":"exact"}],"termid":"PR:Q09862"}


id: PBO:0051290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-8","termid":"PBO:0051290"}


id: GO:0046771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The envelopment of a virus, in which the nucleocapsid evaginates from the host inner nuclear membrane system into the perinuclear space, thus acquiring a membrane envelope.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding from nuclear membrane","termid":"GO:0046765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from inner nuclear membrane","synonyms":[{"name":"inner nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from inner nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from inner nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046771"}


id: PBO:0062837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 3","termid":"PBO:0062837"}


id: GO:0051462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cortisol secretion","termid":"GO:0051462"}


id: PBO:0046274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential meiotic structure-specific endonuclease 1","termid":"PBO:0046274"}


id: GO:0110099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion import into the mitochondrion.","definition_xrefs":["GOC:sl","PMID:24085037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium import into the mitochondrion","termid":"GO:0110097"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"negatively_regulates","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcium import into the mitochondrion","termid":"GO:0110099"}


id: GO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-xylose is transported across a lipid bilayer, from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"D-xylose transmembrane transport","synonyms":[{"name":"D-xylose transport","type":"related"}],"termid":"GO:0015753"}


id: PBO:0041759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclase associated actin cytoskeleton regulatory protein 2 pseudogene 1","termid":"PBO:0041759"}


id: PBO:0061119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 9","termid":"PBO:0061119"}


id: PBO:0081079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 11","termid":"PBO:0081079"}


id: PR:P36632
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad26 gene.","definition_xrefs":["UniProtKB:P36632","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.08","synonyms":[{"name":"Spom972h-rad26","type":"exact"}],"termid":"PR:P36632"}


id: FYPO:0000960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethanol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on ethanol","synonyms":[{"name":"normal cell population growth in presence of ethanol","type":"exact"},{"name":"normal cell population growth on ethanol","type":"exact"},{"name":"normal cell population growth on to ethyl alcohol","type":"exact"},{"name":"normal cellular response to ethanol","type":"related"},{"name":"normal vegetative cell population growth on ethanol","type":"exact"}],"termid":"FYPO:0000960"}


id: PBO:0045869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 2","termid":"PBO:0045869"}


id: PBO:0041466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 126","termid":"PBO:0041466"}


id: GO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures.","definition_xrefs":["GOC:go_curators","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"extracellular polysaccharide metabolic process","termid":"GO:0046379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"extracellular polysaccharide biosynthetic process","synonyms":[{"name":"extracellular polysaccharide anabolism","type":"exact"},{"name":"extracellular polysaccharide biosynthesis","type":"exact"},{"name":"extracellular polysaccharide formation","type":"exact"},{"name":"extracellular polysaccharide synthesis","type":"exact"}],"termid":"GO:0045226"}


id: PBO:0048155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 1","termid":"PBO:0048155"}


id: PBO:0060150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 1","termid":"PBO:0060150"}


id: GO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the mesoderm.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate commitment","synonyms":[{"name":"mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0001710"}


id: PBO:0085537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S8, no bacterial homolog; RPS8A has a paralog, RPS8B, that arose from the whole genome duplication","termid":"PBO:0085537"}


id: PBO:0043710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 7","termid":"PBO:0043710"}


id: GO:1902384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycyrrhetinate.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"glycyrrhetinate metabolic process","synonyms":[{"name":"glycyrrhetinate metabolism","type":"exact"}],"termid":"GO:1902384"}


id: PBO:0077235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 1 pseudogene 1","termid":"PBO:0077235"}


id: PBO:0090319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Csr102","termid":"PBO:0090319"}


id: GO:0071709
data:
  {"annotated_genes":["SJAG_03536","SJAG_02169","SJAG_00114","SJAG_04275","SJAG_04922","SJAG_00416","SJAG_01050","SJAG_02529","SJAG_01745","SJAG_05207","SJAG_03892","SJAG_04781","SJAG_00663","SJAG_03783","SJAG_01769","SJAG_00900","SJAG_04080","SJAG_04010","SJAG_03915","SJAG_03746","SJAG_03891","SJAG_01467","SJAG_02241","SJAG_01242","SJAG_04489","SJAG_02320","SJAG_02248","SJAG_04470","SJAG_00826","SJAG_03688","SJAG_00971","SJAG_02736","SJAG_04615"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90972,97204,113914,86965,100696,102766,113630,105442,94376,93114,93155,114088,95413,109179,112091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[114638,87018,98595,93526,114636,114637,101961,91564,114639,96395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"},{"annotations":[71999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031468"},{"annotations":[86438],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[90130,111161,95348,95349,101421,95626],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00416":null,"SJAG_00663":null,"SJAG_00826":null,"SJAG_00900":null,"SJAG_00971":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04489":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"membrane assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null,"PMID:32243490":null},"termid":"GO:0071709","terms_by_termid":{"GO:0007084":null,"GO:0031468":null,"GO:0032120":null,"GO:0070583":null,"GO:1903024":null}}


id: PATO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000311 color hue value (obsolete PATO:0000311)","termid":"PATO:0000311"}


id: PATO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001075 absolute momentum (obsolete PATO:0001075)","termid":"PATO:0001075"}


id: PBO:0017810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pig-U, Gab1 (predicted)","termid":"PBO:0017810"}


id: FYPO:0003247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abolished histone H3 binding","synonyms":[{"name":"abolished protein-histone H3 interaction","type":"exact"},{"name":"histone H3 binding abolished","type":"exact"}],"termid":"FYPO:0003247"}


id: GO:1902735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor-mediated virion attachment to host cell.","definition_xrefs":["PMID:18385238","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated virion attachment to host cell","termid":"GO:1902734"},{"relation_name":"negatively_regulates","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor-mediated virion attachment to host cell","synonyms":[{"name":"down regulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"down regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"down-regulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"down-regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"downregulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"downregulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"inhibition of receptor-mediated virion attachment to host cell","type":"narrow"},{"name":"inhibition of virion attachment, binding of host cell surface receptor","type":"narrow"},{"name":"negative regulation of virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:1902735"}


id: GO:0097048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a dendritic cell, a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["CL:0000451","GOC:BHF","GOC:mtg_apoptosis","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell apoptotic process","synonyms":[{"name":"dendritic cell apoptosis","type":"narrow"}],"termid":"GO:0097048"}


id: PATO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's lacks enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sufficiency","termid":"PATO:0001626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insufficient","synonyms":[{"name":"inadequate ","type":"related"}],"termid":"PATO:0001628"}


id: PBO:0064753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 89","termid":"PBO:0064753"}


id: PBO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 10","termid":"PBO:0070705"}


id: PBO:0042337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD69 molecule","termid":"PBO:0042337"}


id: PBO:0085644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in maintaining mitochondrial integrity and glutathione homeostasis; localized to the cytoplasm; in W303 strain IMI1 is encoded by one continuous open reading frame comprising of YDL037C, the intergenic region and YDL039C, while in the reference sequence of S288C, YDL037C encodes Bsc1p and YDL039C encodes Prm7p.","termid":"PBO:0085644"}


id: GO:0016544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect taps the female with his frontal leg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, tapping to detect pheromone","synonyms":[{"name":"male courtship behavior, tapping","type":"related"},{"name":"male courtship behaviour, tapping","type":"exact"},{"name":"male courtship behaviour, tapping to detect pheromone","type":"related"}],"termid":"GO:0016544"}


id: PBO:0003814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex mu subunit Apm1","termid":"PBO:0003814"}


id: GO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pseudotropine = H+ + NADPH + tropinone.","definition_xrefs":["EC:1.1.1.236","RHEA:24244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tropinone reductase activity","secondary_identifiers":["MetaCyc:TROPINONE-REDUCTASE-RXN","KEGG_REACTION:R06734"],"synonyms":[{"name":"pseudotropine forming tropinone reductase activity","type":"related"},{"name":"pseudotropine:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"tropinone (psi-tropine-forming) reductase activity","type":"related"},{"name":"tropinone reductase II activity","type":"related"}],"termid":"GO:0050358"}


id: GO:0003929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAN small monomeric GTPase activity (obsolete GO:0003929)","synonyms":[{"name":"RAN small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003929"}


id: PBO:0058333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4707","termid":"PBO:0058333"}


id: GO:0098017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral capsid that comprises the most common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the hexameric capsomeres are major subunits.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsomere","termid":"GO:0046727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, major subunit","synonyms":[{"name":"major capsomere","type":"exact"},{"name":"major head protein","type":"related"}],"termid":"GO:0098017"}


id: PATO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; characterized with an egg-shaped form crossed with a lance-head shaped form.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lanceolate","termid":"PATO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lance-ovate","termid":"PATO:0002337"}


id: GO:0004741
data:
  {"annotated_genes":["SJAG_03310"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75309],"is_not":false,"summary":null,"term":"GO:0004741"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + H2O = L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + phosphate.","definition_xrefs":["EC:3.1.3.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03310":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0004721","GO:0003824","GO:0016788","GO:0140096"],"is_obsolete":false,"name":"[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0019906","MetaCyc:3.1.3.43-RXN","RHEA:12669","Reactome:R-HSA-204169"],"synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase activity","type":"exact"},{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic catalyst activity","type":"exact"},{"name":"pyruvate dehydrogenase (lipoamide) phosphatase activity","type":"exact"}],"termid":"GO:0004741","terms_by_termid":{"GO:0004741":null}}


id: PBO:0054621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2026","termid":"PBO:0054621"}


id: PBO:0085664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nonstop mRNA decay; predicted to be palmitoylated","termid":"PBO:0085664"}


id: GO:0099611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the potential at which an axon potential is triggered.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing threshold","termid":"GO:0099611"}


id: PBO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_of_cell_population_growth","termid":"PBO:0030382"}


id: SO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 5 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"five prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001975"}


id: PBO:0086494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphomutase; contains a region homologous to the active site of phosphomutases; overexpression suppresses the histidine auxotrophy of an ade3 ade16 ade17 triple mutant and the temperature sensitivity of a tps2 mutant","termid":"PBO:0086494"}


id: PBO:0059662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 28","termid":"PBO:0059662"}


id: PBO:0056380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK10 antisense RNA 1","termid":"PBO:0056380"}


id: GO:0097715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"},{"relation_name":"is_a","term_name":"response to viscosity","termid":"GO:0097714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to viscosity","termid":"GO:0097715"}


id: GO:0046157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"siroheme metabolic process","termid":"GO:0046156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0044248"],"is_obsolete":false,"name":"siroheme catabolic process","synonyms":[{"name":"sirohaem catabolic process","type":"exact"},{"name":"sirohaem catabolism","type":"exact"},{"name":"siroheme breakdown","type":"exact"},{"name":"siroheme catabolism","type":"exact"},{"name":"siroheme degradation","type":"exact"}],"termid":"GO:0046157"}


id: GO:0009435
data:
  {"annotated_genes":["SJAG_03298","SJAG_01500","SJAG_00957","SJAG_01359","SJAG_04693","SJAG_02889","SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74182,76485],"is_not":false,"summary":null,"term":"GO:0009435"},{"annotations":[86364,71099,86763,108345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[78540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"},{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NAD biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0006736"],"synonyms":[{"name":"NAD (oxidized) biosynthesis","type":"exact"},{"name":"NAD (oxidized) biosynthetic process","type":"exact"},{"name":"NAD (reduced) biosynthesis","type":"exact"},{"name":"NAD (reduced) biosynthetic process","type":"exact"},{"name":"NAD anabolism","type":"exact"},{"name":"NAD biosynthesis","type":"exact"},{"name":"NAD formation","type":"exact"},{"name":"NAD synthesis","type":"exact"},{"name":"NADH biosynthesis","type":"exact"},{"name":"NADH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized NAD biosynthesis","type":"exact"},{"name":"oxidized NAD biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"reduced NAD biosynthesis","type":"exact"},{"name":"reduced NAD biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0009435","terms_by_termid":{"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: GO:2000676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell apoptotic process","termid":"GO:2000674"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"positive regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"positive regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"positive regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000676"}


id: PBO:0072702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB like AAA ATPase 2","termid":"PBO:0072702"}


id: PATO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000469 high (obsolete PATO:0000469)","termid":"PATO:0000469"}


id: PR:P36597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nmt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.02","synonyms":[{"name":"HMP-P synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nmt1","type":"exact"},{"name":"hydroxymethylpyrimidine phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"no message in thiamine protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thiamine biosynthesis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thiamine pyrimidine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36597"}


id: PATO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity toward an external stimulus which is higher than normal/average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitive toward","termid":"PATO:0000516"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity toward","synonyms":[{"name":"high sensitivity toward","type":"exact"},{"name":"increased sensitivity","type":"exact"}],"termid":"PATO:0001549"}


id: MOD:01182
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks a cysteine and a histidine residue by forming the adduct 6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FAD.","definition_xrefs":["RESID:AA0436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"flavin crosslinked residues","termid":"MOD:01621"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FAD","synonyms":[{"name":"6-((R)-2-amino-2-carboxyethyl)sulfanyl-8alpha-[4-((S)-2-amino-2-carboxyethyl)imidazol-3-yl]-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine","type":"exact"},{"name":"6-(S-L-cysteinyl)-8alpha-(N3'-L-histidino)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(delta1)-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(pi)-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N3'-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(pros-histidyl)-FAD","type":"exact"},{"name":"BINDING FAD (covalent; via 2 links)","type":"exact"},{"name":"BINDING FAD (covalent; via 2 links, pros nitrogen)","type":"exact"},{"name":"CROSSLNK 6-(S-cysteinyl)-8alpha-(pros-histidyl)-FAD (His-Cys)","type":"exact"},{"name":"SCys6-NprosHis8a-FAD","type":"exact"}],"termid":"MOD:01182"}


id: PBO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 1 chain","termid":"PBO:0043577"}


id: GO:0016858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Racemase and epimerase activity on compounds other than amino acids, hydroxy acids, carbohydrates or their derivatives.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete racemase and epimerase activity, acting on other compounds (obsolete GO:0016858)","synonyms":[{"name":"racemase and epimerase activity, acting on other compounds","type":"exact"}],"termid":"GO:0016858"}


id: PBO:0060168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTSS I-BAR domain containing 2","termid":"PBO:0060168"}


id: GO:0030684
data:
  {"annotated_genes":["SJAG_02377","SJAG_03410","SJAG_01420","SJAG_00562","SJAG_02372","SJAG_04424","SJAG_02608","SJAG_01839","SJAG_02025","SJAG_04224","SJAG_03341","SJAG_03012","SJAG_00344","SJAG_02350","SJAG_03156","SJAG_03846","SJAG_02681","SJAG_03719","SJAG_02662","SJAG_01799","SJAG_00657","SJAG_00965","SJAG_03931","SJAG_04979","SJAG_01494","SJAG_01752","SJAG_02427","SJAG_00772","SJAG_01272","SJAG_01115","SJAG_02300","SJAG_01811","SJAG_02702","SJAG_00294","SJAG_02046","SJAG_03077","SJAG_00271","SJAG_02530","SJAG_03252","SJAG_01275","SJAG_01618","SJAG_04847","SJAG_05187","SJAG_00689","SJAG_03569","SJAG_01338","SJAG_04611","SJAG_00897","SJAG_03028","SJAG_02287","SJAG_00253","SJAG_05018","SJAG_00245","SJAG_04395","SJAG_01907","SJAG_04346","SJAG_01454","SJAG_04330","SJAG_02436","SJAG_02250","SJAG_01581","SJAG_04992","SJAG_03413","SJAG_03458","SJAG_04908","SJAG_00945","SJAG_04475","SJAG_03617","SJAG_00572","SJAG_02759","SJAG_05186","SJAG_04339","SJAG_00311","SJAG_00943","SJAG_02830","SJAG_03466","SJAG_01764","SJAG_00744","SJAG_00142","SJAG_00879","SJAG_00882","SJAG_04492","SJAG_04033","SJAG_03496","SJAG_04069","SJAG_01821","SJAG_01877","SJAG_03697","SJAG_03539","SJAG_00538","SJAG_02024","SJAG_04491","SJAG_00838","SJAG_01606","SJAG_00722","SJAG_01169","SJAG_04919","SJAG_03654"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85678,110514],"is_not":false,"summary":null,"term":"GO:0030684"},{"annotations":[73292,96089,72641,111914,76916,97067,71930,110897,88251,75134,71114,70600,75311,102418,108323,111729,75657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030686"},{"annotations":[75269,78782,77266],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034457"},{"annotations":[78748,93447,72510],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[72511,78749,107702],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"},{"annotations":[77600,72453],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"},{"annotations":[75360,73399,74400],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070545"},{"annotations":[111419,78196,72185,72303,93536,101410,71600,74399,75866,77555,76314,90448,74644,75517,77985,71369,88842,94981,75359,113294,98949,75350,78590,94717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030687"},{"annotations":[108154,71352,74638,70176,78180,102356,73866,78130,97070,74305,106347,108245,70601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030688"},{"annotations":[75859,71776,71393,78386,73032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034388"},{"annotations":[105521,110402,78372,77906,74698,84989,94337,75658,71553,112550,75312,96909,71392,77601,78174,73094,87702,73031,71108,78781,88274,74895,76141,86909,105878,72454,75858,101623,73990,78385,70744,77265,76655,108782,74874,77148,72540,71775,72642,83550,75268,77397,71120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032040"},{"annotations":[89372,74274,75644,77399,77052],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"Any complex of pre-rRNAs, ribosomal proteins, and associated proteins formed during ribosome biogenesis.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein 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id: FYPO:0001443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"},{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished transcription during vegetative growth","synonyms":[{"name":"abolished transcription during mitotic cell cycle","type":"related"},{"name":"transcription abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001443"}


id: PBO:0085147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolin, nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; binds to G-quadruplex DNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation","termid":"PBO:0085147"}


id: GO:0030566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an snRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"snRNA modification guide activity","termid":"GO:0030566"}


id: PBO:0053604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 636","termid":"PBO:0053604"}


id: PBO:0087559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of signal peptidase complex; complex catalyzes cleavage of N-terminal signal sequences of proteins targeted to the secretory pathway; homologous to mammalian SPC22/23; other members of the complex are Spc1p, Spc2p, and Sec11p","termid":"PBO:0087559"}


id: GO:1900032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trichome patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"trichome patterning","termid":"GO:0048629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of trichome patterning","synonyms":[{"name":"regulation of trichome distribution","type":"broad"},{"name":"regulation of trichome pattern biosynthesis","type":"exact"},{"name":"regulation of trichome pattern formation","type":"exact"},{"name":"regulation of trichome pattern specification","type":"related"},{"name":"regulation of trichome spacing","type":"exact"}],"termid":"GO:1900032"}


id: PBO:0060262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenic factor 5","termid":"PBO:0060262"}


id: PBO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 3","termid":"PBO:0043314"}


id: PBO:0080482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 2","termid":"PBO:0080482"}


id: FYPO:0003330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the new mitotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to new mitotic spindle pole body","synonyms":[{"name":"normal asymmetric protein localization to new mitotic spindle pole body","type":"exact"},{"name":"normal protein localisation to new mitotic spindle pole body","type":"exact"},{"name":"normal protein localization to new mitotic SPB","type":"exact"},{"name":"normal protein localization to new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal protein localization to new spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0003330"}


id: PBO:0050464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMA domain containing 1","termid":"PBO:0050464"}


id: PBO:0081583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF511-PRAP1 readthrough","termid":"PBO:0081583"}


id: GO:0043313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of neutrophil degranulation","synonyms":[{"name":"regulation of neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043313"}


id: PBO:0087087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L5; nascent Rpl5p is bound by specific chaperone Syo1p during translation; homologous to mammalian ribosomal protein L5 and bacterial L18; binds 5S rRNA and is required for 60S subunit assembly","termid":"PBO:0087087"}


id: PBO:0110365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPCIP antisense RNA 1","termid":"PBO:0110365"}


id: GO:0042084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to an acceptor molecule; dependent on the presence of 5-methyltetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"5-methyltetrahydrofolate-dependent methyltransferase activity","termid":"GO:0042084"}


id: PBO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 7","termid":"PBO:0045649"}


id: PBO:0040413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit a4","termid":"PBO:0040413"}


id: PBO:0059499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"msh homeobox 2","termid":"PBO:0059499"}


id: GO:0004766
data:
  {"annotated_genes":["SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74380],"is_not":false,"summary":null,"term":"GO:0004766"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine.","definition_xrefs":["EC:2.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"spermidine synthase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:SPERMIDINESYN-RXN","Reactome:R-HSA-351215","RHEA:12721"],"synonyms":[{"name":"S-adenosylmethioninamine:putrescine 3-aminopropyltransferase activity","type":"related"},{"name":"SpeE","type":"related"},{"name":"aminopropyltransferase activity","type":"related"},{"name":"putrescine aminopropyltransferase activity","type":"related"},{"name":"spermidine synthetase activity","type":"related"}],"termid":"GO:0004766","terms_by_termid":{"GO:0004766":null}}


id: PBO:0092023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline (ugg), mitochondrial","termid":"PBO:0092023"}


id: PBO:0061197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide associated 1","termid":"PBO:0061197"}


id: GO:0050321
data:
  {"annotated_genes":["SJAG_02838","SJAG_04469","SJAG_04507","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75396,76272,76431,76583],"is_not":false,"summary":null,"term":"GO:0050321"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + tau-protein = ADP + O-phospho-tau-protein.","definition_xrefs":["MetaCyc:TAU-PROTEIN-KINASE-RXN","EC:2.7.11.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02838":null,"SJAG_03602":null,"SJAG_04469":null,"SJAG_04507":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016301","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"tau-protein kinase activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"ATP:tau-protein O-phosphotransferase activity","type":"broad"},{"name":"CDK5/p23","type":"related"},{"name":"GSK","type":"related"},{"name":"STK31","type":"related"},{"name":"TPK","type":"related"},{"name":"TPK I","type":"related"},{"name":"TPK II","type":"related"},{"name":"TTK","type":"related"},{"name":"[Tau protein] kinase activity","type":"exact"},{"name":"brain protein kinase PK40erk activity","type":"narrow"},{"name":"cdk5/p20","type":"related"},{"name":"glycogen synthase kinase-3beta activity","type":"related"},{"name":"protein tau kinase activity","type":"related"},{"name":"tau kinase activity","type":"related"},{"name":"tau protein kinase activity","type":"related"},{"name":"tau-protein kinase I activity","type":"narrow"},{"name":"tau-protein kinase II activity","type":"narrow"},{"name":"tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:0050321","terms_by_termid":{"GO:0050321":null}}


id: FYPO:0003811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to only one side of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial aggregation","termid":"FYPO:0000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"asymmetric mitochondrial aggregation","synonyms":[{"name":"asymmetric mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial aggregation during vegetative growth","type":"exact"},{"name":"mitochondria localized to one cell end","type":"related"},{"name":"monopolar intracellular mitochondrion distribution","type":"related"},{"name":"monopolar intracellular mitochondrion localisation","type":"related"},{"name":"monopolar intracellular mitochondrion localization","type":"related"},{"name":"monopolar mitochondrial aggregation","type":"related"},{"name":"monopolar mitochondrion distribution","type":"related"}],"termid":"FYPO:0003811"}


id: PBO:0057746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1825","termid":"PBO:0057746"}


id: PBO:0084274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for the biogenesis of ER-derived COPII transport vesicles; interacts with Yif1p and Yos1p; localizes to the Golgi, the ER, and COPII vesicles; human homolog YIPF5 can complement yeast yip1 mutant","termid":"PBO:0084274"}


id: PBO:0090713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit Sac3","termid":"PBO:0090713"}


id: PBO:0064185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLA2G10 pseudogene 1","termid":"PBO:0064185"}


id: PBO:0086796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBL112C is contained within TEL02L","termid":"PBO:0086796"}


id: FYPO:0006982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell wall are normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell wall morphology during vegetative growth","synonyms":[{"name":"normal cell wall morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006982"}


id: FYPO:0000664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified catalytic activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished catalytic activity","synonyms":[{"name":"catalytic activity abolished","type":"exact"}],"termid":"FYPO:0000664"}


id: GO:0031415
data:
  {"annotated_genes":["SJAG_02920","SJAG_04631","SJAG_02726","SJAG_04179"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70396,75248,76506,113103],"is_not":false,"summary":null,"term":"GO:0031415"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to an N-terminal Ser, Ala, Gly, or Thr residue of a protein acceptor molecule. In Saccharomyces the complex includes Nat1p and Ard1p, and may contain additional proteins.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02726":null,"SJAG_02920":null,"SJAG_04179":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"NatA complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"N-terminal acetyltransferase A complex","type":"exact"}],"termid":"GO:0031415","terms_by_termid":{"GO:0031415":null}}


id: PBO:0075980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 5A","termid":"PBO:0075980"}


id: GO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of vanadium (V) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vanadium ion transport","termid":"GO:0015676"}


id: PBO:0075560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG11 vesicle trafficking associated, spatacsin","termid":"PBO:0075560"}


id: PBO:0029449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_polysaccharide_level","termid":"PBO:0029449"}


id: FYPO:0002857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutathione synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutathione synthase activity","termid":"FYPO:0002856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0005447","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"abolished glutathione synthase activity","synonyms":[{"name":"abolished GSH synthase activity","type":"exact"},{"name":"abolished glutathione synthetase activity","type":"exact"},{"name":"glutathione synthase activity abolished","type":"exact"}],"termid":"FYPO:0002857"}


id: GO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chitin","termid":"GO:0010200"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chitin","termid":"GO:0071323"}


id: GO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-3-hydroxy-L-aspartate = NH4 + oxaloacetate.","definition_xrefs":["RHEA:12424","EC:4.3.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"threo-3-hydroxyaspartate ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.16-RXN","KEGG_REACTION:R05758"],"synonyms":[{"name":"3-hydroxyaspartate dehydratase activity","type":"broad"},{"name":"L-threo-3-hydroxyaspartate dehydratase activity","type":"related"},{"name":"threo-3-hydroxy-L-aspartate ammonia-lyase (oxaloacetate-forming)","type":"related"},{"name":"threo-3-hydroxy-L-aspartate ammonia-lyase activity","type":"related"},{"name":"threo-3-hydroxyaspartate dehydratase activity","type":"related"}],"termid":"GO:0030848"}


id: PBO:0047135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 172 member A","termid":"PBO:0047135"}


id: GO:0016749
data:
  {"annotated_genes":["SJAG_03961","SJAG_00097"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91378,67703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"N-succinyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"termid":"GO:0016749","terms_by_termid":{"GO:0003870":null}}


id: PBO:0074113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 4 pseudogene 1","termid":"PBO:0074113"}


id: PBO:0070639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 10","termid":"PBO:0070639"}


id: PBO:0066754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 52","termid":"PBO:0066754"}


id: PBO:0075819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 3","termid":"PBO:0075819"}


id: GO:0006913
data:
  {"annotated_genes":["SJAG_03299","SJAG_03012","SJAG_02534","SJAG_04589","SJAG_04721","SJAG_01909","SJAG_03658","SJAG_01715","SJAG_00471","SJAG_00840","SJAG_00753","SJAG_01374","SJAG_02661","SJAG_01652","SJAG_01328","SJAG_02592","SJAG_00992","SJAG_04366","SJAG_03662","SJAG_03719","SJAG_04622","SJAG_03048","SJAG_04656","SJAG_04115","SJAG_00375","SJAG_02274","SJAG_03882","SJAG_04536","SJAG_01805","SJAG_01834","SJAG_01293","SJAG_03283","SJAG_01529","SJAG_04411","SJAG_00641","SJAG_01534","SJAG_01789","SJAG_02520","SJAG_03959","SJAG_04940","SJAG_00968","SJAG_01245","SJAG_01655","SJAG_03873","SJAG_00093","SJAG_03986","SJAG_01065","SJAG_04308","SJAG_03300","SJAG_03847","SJAG_02998","SJAG_01449","SJAG_00298","SJAG_00178","SJAG_04148","SJAG_04284","SJAG_02210","SJAG_00065","SJAG_03697","SJAG_01311","SJAG_04464","SJAG_02757","SJAG_03693","SJAG_01358","SJAG_03002","SJAG_04379","SJAG_03470","SJAG_03156","SJAG_01185","SJAG_03729","SJAG_04347","SJAG_03593","SJAG_00586","SJAG_01621","SJAG_04083","SJAG_01013","SJAG_04017","SJAG_01391","SJAG_01584","SJAG_01083","SJAG_03453","SJAG_03281","SJAG_04645","SJAG_05243","SJAG_03182","SJAG_04472","SJAG_01717","SJAG_04480","SJAG_02704","SJAG_04400","SJAG_00383","SJAG_03907","SJAG_04312","SJAG_02250","SJAG_05328","SJAG_01338","SJAG_01339","SJAG_02425","SJAG_04310","SJAG_01125","SJAG_04202","SJAG_03836","SJAG_00962"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83180,89079,91237,93509,100220,103150,111231,111647,112435],"is_not":false,"summary":null,"term":"GO:0006913"},{"annotations":[64604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051170"},{"annotations":[96655,72463,75949,110735,76554,73778,72696,112406,85229,92680,78636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[101220],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042308"},{"annotations":[74430,76248,96656,73370,111605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006607"},{"annotations":[73979,101670,97449,71387,73244,92123,110987,109690,103018,107028,113136,106408,87841,111246,72801,92529,97349,78852,105741,105189,111502,74914,87665,114002,99397,98111,104046,96895,73685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[97337,106306,89446,95945],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0046827"},{"annotations":[97860,86548,89998],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0042307"},{"annotations":[71651,96657,86771,104927,92093,112532,88803,112805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006611"},{"annotations":[89910,75098,71524,100469,75033,91722,74915,77414,72545,70362,71473,93398,78853,72907,71153,78242,78637,73980,78726,74558,101740,75475,71650,73594,73245,72681,84675,72697,89625,76725,110115,73853,66416,73357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006606"},{"annotations":[95155,75328,76098,101156,75802,112806,111420,78638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[78639,70603,70180,75329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[89626,71525,99398,76765,105742,84769,87387,78200,91723,101567,90585,96896,75541,95923,106725,100795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"},{"annotations":[91724,74557,89627,75618,100471,78725,75032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[98020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[72027,77401,100684,101157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[78289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of molecules between the nucleus and the cytoplasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear 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transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"secondary_identifiers":["GO:0000063"],"synonyms":[{"name":"nucleocytoplasmic shuttling","type":"narrow"}],"termid":"GO:0006913","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0006606":null,"GO:0006607":null,"GO:0006611":null,"GO:0006913":null,"GO:0016973":null,"GO:0042307":null,"GO:0042308":null,"GO:0046827":null,"GO:0051170":null,"GO:0071528":null}}


id: GO:0002118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral interaction between organisms in which one organism has the intention of inflicting physical damage on another individual.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggressive behavior","secondary_identifiers":["Wikipedia:Aggression"],"synonyms":[{"name":"aggression","type":"exact"}],"termid":"GO:0002118"}


id: PR:Q9C0V1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- amt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB1C11.01","synonyms":[{"name":"Spom972h-amt1","type":"exact"}],"termid":"PR:Q9C0V1"}


id: FYPO:0002153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but have a lower volume than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable small vegetative cell population (obsolete FYPO:0002153)","synonyms":[{"name":"wee population","type":"exact"}],"termid":"FYPO:0002153"}


id: PBO:0044495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 3","termid":"PBO:0044495"}


id: GO:0140124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Lewy body formation.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of Lewy body formation","termid":"GO:0140122"},{"relation_name":"positively_regulates","term_name":"Lewy body formation","termid":"GO:0140121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Lewy body formation","termid":"GO:0140124"}


id: PBO:0084306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter, mediates Fe2+ transport across inner mito membrane; mitochondrial carrier family member; active under low-iron conditions; may transport other cations; MRS3 has a paralog, MRS4, that arose from the whole genome duplication","termid":"PBO:0084306"}


id: PBO:0085704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity","termid":"PBO:0085704"}


id: GO:0061059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidoglycan recognition protein signaling pathway","termid":"GO:0061058"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"positive regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061059"}


id: PATO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000809 taste value (obsolete PATO:0000809)","termid":"PATO:0000809"}


id: PBO:0029615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029615"}


id: PBO:0041275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 2","termid":"PBO:0041275"}


id: PBO:0091384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ca(2+)/H(+) antiporter Gdt2","termid":"PBO:0091384"}


id: PBO:0049174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 7","termid":"PBO:0049174"}


id: RO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l ","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_along","termid":"RO:0002341"}


id: PBO:0073277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 11","termid":"PBO:0073277"}


id: GO:1902347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a strigolactone stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23893171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to strigolactone","synonyms":[{"name":"response to strigolactone analog GR24","type":"related"}],"termid":"GO:1902347"}


id: FYPO:0003262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA measured in a cell is greater than normal. All types of small RNA, a particular RNA type, or a specific small RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:24095277"],"gene_count":0,"genotype_count":0,"name":"obsolete increased small RNA level (obsolete FYPO:0003262)","synonyms":[{"name":"increased accumulation of small RNAs","type":"related"},{"name":"increased small RNA accumulation","type":"related"},{"name":"increased small RNA level","type":"related"},{"name":"increased small RNA level during mitotic cell cycle","type":"related"},{"name":"increased small RNA level during vegetative growth","type":"exact"},{"name":"reduced small RNA level","type":"exact"}],"termid":"FYPO:0003262"}


id: PBO:0003510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER chaperone SHR3 homologue Psh3","termid":"PBO:0003510"}


id: GO:1904317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:9321918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","termid":"GO:1904316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"cellular response to PAF","type":"exact"},{"name":"cellular response to platelet-activating factor","type":"exact"}],"termid":"GO:1904317"}


id: PBO:0069249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 504, pseudogene","termid":"PBO:0069249"}


id: PBO:0054705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2114","termid":"PBO:0054705"}


id: FYPO:0007721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of proteins via vesicles from late endosomes to the Golgi is abnormal. This process is normally mediated by the retromer complex.","definition_xrefs":["PMID:33788833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein recycling from late endosome to Golgi","synonyms":[{"name":"abnormal protein recycling from endosome to Golgi by retromer","type":"exact"},{"name":"abnormal protein recycling from late endosome to Golgi during mitotic cell cycle","type":"related"},{"name":"abnormal protein recycling from late endosome to Golgi during vegetative growth","type":"exact"},{"name":"abnormal retromer-mediated protein recycling from endosome to Golgi","type":"exact"}],"termid":"FYPO:0007721"}


id: GO:0032283
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An acetate CoA-transferase complex located in the stroma of a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate CoA-transferase complex","termid":"GO:0009329"},{"relation_name":"part_of","term_name":"plastid acetyl-CoA carboxylase complex","termid":"GO:0032282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plastid acetate CoA-transferase complex","termid":"GO:0032283"}


id: GO:0035528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine in glycosidic linkage with uridine diphosphate, that contribute to the biosynthesis of chitin.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-N-acetylglucosamine biosynthesis involved in chitin biosynthesis (obsolete GO:0035528)","synonyms":[{"name":"UDP-GlcNAc biosynthesis involved in chitin biosynthesis","type":"exact"},{"name":"UDP-GlcNAc biosynthetic process involved in chitin biosynthesis","type":"exact"},{"name":"UDP-GlcNAc biosynthetic process involved in chitin biosynthetic process","type":"exact"},{"name":"UDP-N-acetylglucosamine anabolism involved in chitin biosynthesis","type":"exact"},{"name":"UDP-N-acetylglucosamine biosynthetic process involved in chitin biosynthetic process","type":"exact"},{"name":"UDP-N-acetylglucosamine formation involved in chitin biosynthesis","type":"exact"},{"name":"UDP-N-acetylglucosamine synthesis involved in chitin biosynthesis","type":"exact"}],"termid":"GO:0035528"}


id: PBO:0087508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric nuclear SUMO activating enzyme E1 with Aos1p; activates Smt3p (SUMO) before its conjugation to proteins (sumoylation), which may play a role in protein targeting; essential for viability","termid":"PBO:0087508"}


id: PBO:0082587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cis-golgi GTPase-activating protein (GAP) for yeast Rabs; the Rab family members are Ypt1p (in vivo) and for Ypt1p, Sec4p, Ypt7p, and Ypt51p (in vitro); involved in vesicle docking and fusion; interacts with autophagosome component Atg8p","termid":"PBO:0082587"}


id: PBO:0087811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetradecameric mitochondrial chaperonin; required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; phosphorylated","termid":"PBO:0087811"}


id: SO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant located with the sequence of the mature miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_miRNA_variant","secondary_identifiers":["XX:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"VEP:mature_miRNA_variant","type":"exact"},{"name":"mature miRNA variant","type":"exact"},{"name":"snpEff:MICRO_RNA","type":"exact"},{"name":"within_mature_miRNA","type":"exact"}],"termid":"SO:0001620"}


id: GO:0106402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a Lewis x epitope, a trisaccharide (beta-D-galactosyl-(1,4)-[alpha-L-fucosyl-(1,3)]-N-acetyl-beta-D-glucosamine) expressed on several glycolipids, glycoproteins, and proteoglycans of the nervous system. The related Lewis x epitope is formed by alpha(1,3) fucosylation of the N-acetylglucosaminyl residue of a type 2 histo-blood group antigen precursor disaccharide.","definition_xrefs":["PMID:16973732","PMID:23000574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Lewis x epitope biosynthetic process","synonyms":[{"name":"sLeX biosynthetic process","type":"related"},{"name":"sialyl-Lewis X biosynthetic process","type":"related"}],"termid":"GO:0106402"}


id: GO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 sucrose = D-glucose + 1F-beta-D-fructosylsucrose.","definition_xrefs":["EC:2.4.1.99","MetaCyc:SUCROSE-1F-FRUCTOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"sucrose 1F-fructosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-1781","RHEA:23312"],"synonyms":[{"name":"SST activity","type":"related"},{"name":"sucrose 1(F)-fructosyltransferase activity","type":"related"},{"name":"sucrose-sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1'-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose fructosyltransferase activity","type":"related"}],"termid":"GO:0050306"}


id: FYPO:0006740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is increased.","definition_xrefs":["PMID:30134042","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at promoter","termid":"FYPO:0007506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at MCB promoters during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at MCB target genes during vegetative growth","type":"related"},{"name":"increased protein localization to chromatin at MCB-containing promoters during vegetative growth","type":"exact"}],"termid":"FYPO:0006740"}


id: GO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a change in identity of a meristem at a characteristic predetermined time point.","definition_xrefs":["GOC:tb","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of meristem development","termid":"GO:0048509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of meristematic phase transition","termid":"GO:0048506"}


id: PBO:0073138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B, vesicle trafficking protein","termid":"PBO:0073138"}


id: PBO:0056904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF4G domain containing","termid":"PBO:0056904"}


id: PBO:0048475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2","termid":"PBO:0048475"}


id: PR:Q9UUJ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01984","PANTHER:PTHR11937:SF37","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.06","secondary_identifiers":["UniProtKB:Q9UUJ1"],"synonyms":[{"name":"Spom972h-ACTR2","type":"exact"},{"name":"actin-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ1"}


id: GO:0034070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + 1-N-acetylaminoglycoside. This is acetylation of the 1-amino group of the central deoxystreptamine ring.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"aminoglycoside 1-N-acetyltransferase activity","termid":"GO:0034070"}


id: PBO:0030466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pantothenate_import","termid":"PBO:0030466"}


id: GO:0008159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that increases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive transcription elongation factor activity (obsolete GO:0008159)","synonyms":[{"name":"positive transcription elongation factor activity","type":"exact"}],"termid":"GO:0008159"}


