# terms

id: MOD:00995
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to (81)Br-L-2'-bromophenylalanine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2'-bromophenylalanine","termid":"MOD:00183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(81)Br labeled 2'-bromophenylalanine","termid":"MOD:00995"}


id: PBO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV radiation resistance associated","termid":"PBO:0080114"}


id: PBO:0084631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase for rRNA; methylates pseudouridine 18S rRNA residue 1191; member of the SPOUT methyltransferase family; required for maturation of 18S rRNA and for 40S ribosomal subunit production independent of methyltransferase activity; forms homodimers; human ortholog is mutated in Bowen-Conradi syndrome, and equivalent yeast mutation affects Emg1p dimerization and localization but not methyltransferase activity; human EMG1 complements lethality of null and ts mutant","termid":"PBO:0084631"}


id: GO:0008333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to lysosomes.","definition_xrefs":["ISBN:0716731363","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"endosome to lysosome transport","termid":"GO:0008333"}


id: PBO:0003662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RITS complex subunit 3","termid":"PBO:0003662"}


id: PR:O13875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.10c gene.","definition_xrefs":["UniProtKB:O13875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Sel1-like repeat-containing protein C1B3.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.10c","synonyms":[{"name":"Spom972h-SPAC1B3.10c","type":"exact"}],"termid":"PR:O13875"}


id: GO:0061541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a rhabdomere are generated and organized. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.","definition_xrefs":["PMID:22113834","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"photoreceptor cell morphogenesis","termid":"GO:0008594"},{"relation_name":"part_of","term_name":"rhabdomere development","termid":"GO:0042052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhabdomere morphogenesis","termid":"GO:0061541"}


id: GO:0110162
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110267],"is_not":false,"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["PMID:27697865","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"regulation of mitotic spindle elongation (spindle phase three)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110162","terms_by_termid":{"GO:0110162":null}}


id: FYPO:0006687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA double-strand break resection that occurs as part of double-strand break repair via homologous recombination is decreased. DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["PMID:21931565","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA double-strand break processing","termid":"FYPO:0006686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased DNA double-strand break processing during double-strand break repair via homologous recombination","synonyms":[{"name":"decreased DNA double-strand break resection during double-strand break repair via homologous recombination","type":"exact"},{"name":"decreased DNA double-strand break resectioning during double-strand break repair via homologous recombination","type":"exact"},{"name":"decreased DSB processing during double-strand break repair via homologous recombination","type":"exact"},{"name":"reduced DNA double-strand break processing during double-strand break repair via homologous recombination","type":"exact"}],"termid":"FYPO:0006687"}


id: PBO:0049071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 88","termid":"PBO:0049071"}


id: PBO:0075664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 5","termid":"PBO:0075664"}


id: PBO:0011455
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"k_cat(x10-3sec-1) for base excision activity of N7-methylguanine = 2.6","termid":"PBO:0011455"}


id: GO:0075041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of establishment of turgor in appressorium (obsolete GO:0075041)","termid":"GO:0075041"}


id: PBO:0085969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; YOL036W has a paralog, YIR016W, that arose from the whole genome duplication","termid":"PBO:0085969"}


id: GO:0035809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urine volume","synonyms":[{"name":"regulation of urinary volume","type":"exact"},{"name":"regulation of urine flow","type":"exact"}],"termid":"GO:0035809"}


id: PBO:0073888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 5","termid":"PBO:0073888"}


id: GO:0008362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis, including the chemical reactions and pathways resulting in the formation of chitin and other components, and deposition of a chitin-based embryonic cuticle by the underlying epidermal epithelium. This tough, waterproof cuticle layer is essential to provide structural integrity of the larval body. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","PMID:12019232","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle development","termid":"GO:0040003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based embryonic cuticle biosynthetic process","synonyms":[{"name":"embryonic cuticle anabolism","type":"broad"},{"name":"embryonic cuticle biosynthetic process","type":"broad"},{"name":"embryonic cuticle formation","type":"broad"},{"name":"embryonic cuticle synthesis","type":"broad"}],"termid":"GO:0008362"}


id: PBO:0086221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p; SAP190 has a paralog, SAP185, that arose from the whole genome duplication","termid":"PBO:0086221"}


id: GO:1990400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial large ribosomal subunit RNA (LSU rRNA).","definition_xrefs":["PMID:24206665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large ribosomal subunit rRNA binding","termid":"GO:0070180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mitochondrial ribosomal large subunit rRNA binding","synonyms":[{"name":"21S rRNA binding","type":"narrow"},{"name":"mitochondrial LSU rRNA binding","type":"exact"}],"termid":"GO:1990400"}


id: GO:1900187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900187"}


id: PR:O43028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vac8 gene.","definition_xrefs":["UniProtKB:O43028","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.14c","synonyms":[{"name":"Spom972h-vac8","type":"exact"}],"termid":"PR:O43028"}


id: PBO:0078527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 17","termid":"PBO:0078527"}


id: RO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x develops from part of y if and only if there exists some z such that x develops from z and z is part of y","direct_ancestors":[{"relation_name":"is_a","term_name":"develops_from","termid":"RO:0002202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"develops_from_part_of","termid":"RO:0002225"}


id: SO:1001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAA_stop_codon_signal","synonyms":[{"name":"UAA stop codon signal","type":"exact"}],"termid":"SO:1001283"}


id: PBO:0060503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 2","termid":"PBO:0060503"}


id: SO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized inside the cytoplasm.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramembrane_polypeptide_region","termid":"SO:0001072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cytoplasmic_polypeptide_region","secondary_identifiers":["BS:00145"],"synonyms":[{"name":"cytoplasm_location","type":"exact"},{"name":"cytoplasmic polypeptide region","type":"exact"},{"name":"inside","type":"related"}],"termid":"SO:0001073"}


id: GO:0006414
data:
  {"annotated_genes":["SJAG_00579","SJAG_04157","SJAG_05271","SJAG_00541","SJAG_02493","SJAG_02020","SJAG_04174","SJAG_03677","SJAG_04452","SJAG_01497","SJAG_03863","SJAG_04847","SJAG_01851","SJAG_04020","SJAG_02585","SJAG_01438","SJAG_01128","SJAG_00898","SJAG_03189","SJAG_02812","SJAG_00188","SJAG_04029","SJAG_02180","SJAG_03094","SJAG_02738","SJAG_04204","SJAG_02017","SJAG_02096","SJAG_01411","SJAG_00468","SJAG_01536","SJAG_02871","SJAG_04168","SJAG_02746","SJAG_01074","SJAG_04862","SJAG_02189","SJAG_02353","SJAG_04756","SJAG_05332","SJAG_03461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109642],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0140708"},{"annotations":[93890,113568,100972,113569,100813,110900,104506,112115,113982,111484,113570,114030,108757,100814,100505,103271,113981,114029,93891,90943,92293,108758,109946,111485,109120,104507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002182"},{"annotations":[78581,73277,98345,106808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070125"},{"annotations":[68570,66793],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045901"},{"annotations":[91067,104829,109222,105479],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140018"},{"annotations":[75782,77262,87536,98579,111281,70118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00468":null,"SJAG_00541":null,"SJAG_00579":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01128":null,"SJAG_01411":null,"SJAG_01438":null,"SJAG_01497":null,"SJAG_01536":null,"SJAG_01851":null,"SJAG_02017":null,"SJAG_02020":null,"SJAG_02096":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02353":null,"SJAG_02493":null,"SJAG_02585":null,"SJAG_02738":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02871":null,"SJAG_03094":null,"SJAG_03189":null,"SJAG_03461":null,"SJAG_03677":null,"SJAG_03863":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04157":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04204":null,"SJAG_04452":null,"SJAG_04756":null,"SJAG_04847":null,"SJAG_04862":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational elongation","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0006455","GO:0006442"],"synonyms":[{"name":"protein synthesis elongation","type":"broad"},{"name":"translation elongation","type":"exact"}],"termid":"GO:0006414","terms_by_termid":{"GO:0002182":null,"GO:0045901":null,"GO:0070125":null,"GO:0072344":null,"GO:0140018":null,"GO:0140708":null}}


id: GO:0007627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Behavior in a larval form of an organism, an immature organism that must undergo metamorphosis to assume adult characteristics, as seen in insects.","definition_xrefs":["GOC:jid","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete larval behavior (sensu Insecta) (obsolete GO:0007627)","synonyms":[{"name":"larval behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0007627"}


id: GO:0019748
data:
  {"annotated_genes":["SJAG_04032","SJAG_00469","SJAG_00792","SJAG_02599","SJAG_04516","SJAG_00988","SJAG_01351","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89743,89735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[89700],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[103790,70926,88944,92596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[92597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090423"},{"annotations":[100805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04516":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Secondary_metabolism"],"synonyms":[{"name":"secondary metabolism","type":"exact"},{"name":"secondary metabolite metabolic process","type":"exact"},{"name":"secondary metabolite metabolism","type":"exact"}],"termid":"GO:0019748","terms_by_termid":{"GO:0019290":null,"GO:0031169":null,"GO:0046938":null,"GO:0090423":null,"GO:1905569":null}}


id: FYPO:0000759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lead ions. Cells stop growing (and may die) at a concentration of lead ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to lead","synonyms":[{"name":"hypersensitive to lead","type":"exact"},{"name":"sensitive to lead during mitotic cell cycle","type":"related"},{"name":"sensitive to lead during vegetative growth","type":"exact"},{"name":"sensitive to lead ions","type":"exact"}],"termid":"FYPO:0000759"}


id: PR:Q9P7B0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1652.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7B0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein STB3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1652.01","synonyms":[{"name":"Spom972h-SPBC1652.01","type":"exact"}],"termid":"PR:Q9P7B0"}


id: PBO:0088074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease involved in protein deubiquitination; forms a complex with AAA peroxins Pex1p and Pex6p; deubiquitinates mono- and polyubiquitinated forms of Pex5p; deubiquitinates Clb5p, counteracting APC activity, and facilitating both Clb5p accumulation and S phase entry; physically interacts with anaphase-promoting complex/cyclosome (APC/C) activator, Cdh1p; catalytic activity regulated by an N-terminal TRAF-like domain and and C-terminal sequences","termid":"PBO:0088074"}


id: PBO:0085163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp2p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; NPP1 has a paralog, NPP2, that arose from the whole genome duplication, and an npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085163"}


id: GO:1904908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["GOC:BHF_telomere","GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:26373281","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:1904907"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"down regulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"down regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"down regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"down regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"down-regulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"down-regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"down-regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"down-regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"downregulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"downregulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"downregulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"downregulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"inhibition of maintenance of mitotic sister chromatid cohesion, telomeric","type":"narrow"},{"name":"inhibition of maintenance of mitotic sister chromatin cohesion at telomere","type":"narrow"},{"name":"inhibition of maintenance of sister chromatin cohesion at telomere at mitosis","type":"narrow"},{"name":"inhibition of maintenance of telomeric mitotic sister chromatin cohesion","type":"narrow"},{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"negative regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904908"}


id: GO:1900817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ochratoxin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"ochratoxin A metabolic process","termid":"GO:1900816"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0044248"],"is_obsolete":false,"name":"ochratoxin A catabolic process","synonyms":[{"name":"ochratoxin A breakdown","type":"exact"},{"name":"ochratoxin A catabolism","type":"exact"},{"name":"ochratoxin A degradation","type":"exact"}],"termid":"GO:1900817"}


id: PBO:0048034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 1 like","termid":"PBO:0048034"}


id: GO:1901606
data:
  {"annotated_genes":["SJAG_03290","SJAG_00493","SJAG_03293","SJAG_03914","SJAG_04827","SJAG_02496","SJAG_01271","SJAG_02235","SJAG_00495","SJAG_00674","SJAG_01766","SJAG_00937","SJAG_03434","SJAG_04634","SJAG_03641","SJAG_00714","SJAG_01019","SJAG_02901","SJAG_03861","SJAG_04145","SJAG_03163","SJAG_00881","SJAG_03398","SJAG_00830","SJAG_01903","SJAG_02450","SJAG_02309","SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[108458,77277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[101399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[71167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[78869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[77675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[113485,78053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[83249,87375,84203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"},{"annotations":[96695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006543"},{"annotations":[93431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[76992,91992,73681,83234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[106519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[107347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[76696,72171,73161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006565"},{"annotations":[88414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006562"},{"annotations":[77068,70577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[76697,72015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[102169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"},{"annotations":[72787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alpha-amino acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_00495":null,"SJAG_00674":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00881":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01019":null,"SJAG_01271":null,"SJAG_01766":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02309":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02901":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03293":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04145":null,"SJAG_04634":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"alpha-amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"alpha-amino acid breakdown","type":"exact"},{"name":"alpha-amino acid catabolism","type":"exact"},{"name":"alpha-amino acid degradation","type":"exact"}],"termid":"GO:1901606","terms_by_termid":{"GO:0006530":null,"GO:0006533":null,"GO:0006538":null,"GO:0006540":null,"GO:0006543":null,"GO:0006546":null,"GO:0006562":null,"GO:0006565":null,"GO:0006567":null,"GO:0006572":null,"GO:0006574":null,"GO:0010121":null,"GO:0010133":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0019547":null,"GO:0033512":null,"GO:0036088":null,"GO:0042853":null}}


id: PBO:0041107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"barttin CLCNK type accessory subunit beta","termid":"PBO:0041107"}


id: PBO:0031381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-invasive_growth_abolished_(obsolete_FYPO:0000048)","termid":"PBO:0031381"}


id: PBO:0068262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N4","termid":"PBO:0068262"}


id: PBO:0109461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein, human LYAR homolog, involved in rRNA processing","termid":"PBO:0109461"}


id: GO:0015743
data:
  {"annotated_genes":["SJAG_02011","SJAG_02140","SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[113548,90632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"}]},"cv_name":"biological_process","definition":"The directed movement of malate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01406":null,"SJAG_02011":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"malate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015743","terms_by_termid":{"GO:0071423":null,"GO:0098714":null}}


id: PBO:0087989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) Um(44) 2'-O-methyltransferase; involved in maintaining levels of the tRNA-Ser species tS(CGA) and tS(UGA); conserved among metazoans and fungi but there does not appear to be a homolog in plants; TRM44 is a non-essential gene","termid":"PBO:0087989"}


id: SO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the nucleotide molecule, interacts selectively and non-covalently with polypeptide residues of a histone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone_binding_site","synonyms":[{"name":"histone binding site","type":"exact"}],"termid":"SO:0001383"}


id: GO:0009830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of abscission.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:lr","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cell wall disassembly","termid":"GO:0044277"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall modification involved in abscission","synonyms":[{"name":"cell wall modification during abscission","type":"related"}],"termid":"GO:0009830"}


id: PBO:0018129
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methemoglobinemia","termid":"PBO:0018129"}


id: GO:2000173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of branching morphogenesis of a nerve.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of branching morphogenesis of a nerve","termid":"GO:2000172"},{"relation_name":"negatively_regulates","term_name":"branching morphogenesis of a nerve","termid":"GO:0048755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branching morphogenesis of a nerve","termid":"GO:2000173"}


id: FYPO:0004540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is incrsasd. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin silencing","synonyms":[{"name":"increased chromatin silencing during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing during vegetative growth","type":"exact"}],"termid":"FYPO:0004540"}


id: GO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methyloct-2-enoyl-CoA + H2O = 3-hydroxy-4-methyloctanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"4-methyloct-2-enoyl-CoA hydratase activity","termid":"GO:0034581"}


id: PBO:0062037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 6","termid":"PBO:0062037"}


id: PBO:0028397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_32S_rRNA_precursor_level","termid":"PBO:0028397"}


id: GO:0090682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is responsible for the sense of bitter taste.","definition_xrefs":["GOC:hat","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bitter taste receptor activity","termid":"GO:0033038"},{"relation_name":"is_a","term_name":"GPCR taste receptor activity","termid":"GO:0090681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"GPCR bitter taste receptor activity","synonyms":[{"name":"G protein-coupled receptor bitter taste receptor activity","type":"exact"},{"name":"G-protein coupled receptor bitter taste receptor activity","type":"exact"}],"termid":"GO:0090682"}


id: GO:0015043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferrileghemoglobin = NADP+ + 2 ferroleghemoglobin.","definition_xrefs":["EC:1.6.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"leghemoglobin reductase activity","secondary_identifiers":["MetaCyc:LEGHEMOGLOBIN-REDUCTASE-RXN"],"synonyms":[{"name":"NAD(P)H:ferrileghemoglobin oxidoreductase activity","type":"related"},{"name":"ferric leghemoglobin reductase activity","type":"related"}],"termid":"GO:0015043"}


id: FYPO:0000206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at ribosomal DNA repeats is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal chromatin silencing at rDNA","synonyms":[{"name":"abnormal chromatin silencing at rDNA during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at rDNA during vegetative growth","type":"exact"},{"name":"abnormal chromatin silencing at ribosomal DNA","type":"exact"}],"termid":"FYPO:0000206"}


id: GO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly-cis-polyprenyl diphosphate + isopentenyl diphosphate = diphosphate + a poly-cis-polyprenyl diphosphate longer by one C5 unit.","definition_xrefs":["MetaCyc:RUBBER-CIS-POLYPRENYLCISTRANSFERASE-RXN","EC:2.5.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyltransferase activity","termid":"GO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rubber cis-polyprenylcistransferase activity","secondary_identifiers":["MetaCyc:2.5.1.20-RXN","RHEA:18801"],"synonyms":[{"name":"cis-prenyl transferase activity","type":"related"},{"name":"isopentenyl pyrophosphate cis-1,4-polyisoprenyl transferase activity","type":"related"},{"name":"poly-cis-polyprenyl-diphosphate:isopentenyl-diphosphate polyprenylcistransferase activity","type":"related"},{"name":"rubber allyltransferase activity","type":"related"},{"name":"rubber polymerase activity","type":"related"},{"name":"rubber prenyltransferase activity","type":"related"},{"name":"rubber transferase activity","type":"broad"}],"termid":"GO:0050267"}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: PBO:0066899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 199","termid":"PBO:0066899"}


id: RO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s is luminal space of x iff s is lumen_of x and s is an immaterial entity","direct_ancestors":[{"relation_name":"is_a","term_name":"lumen_of","termid":"RO:0002571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminal_space_of","termid":"RO:0002572"}


id: GO:0060173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.","definition_xrefs":["GOC:dgh","GOC:dph","PMID:11487378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb development","secondary_identifiers":["Wikipedia:Limb_development"],"synonyms":[{"name":"limb bud development","type":"narrow"},{"name":"paired limb/fin development","type":"exact"}],"termid":"GO:0060173"}


id: PBO:0078328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta variable 3","termid":"PBO:0078328"}


id: PBO:0042310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 4","termid":"PBO:0042310"}


id: PBO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPCML intronic transcript 2","termid":"PBO:0061889"}


id: PBO:0062846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSTM1 antisense RNA 1","termid":"PBO:0062846"}


id: GO:1905596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of low-density lipoprotein particle receptor binding.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000059","PMID:22848640","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor binding","termid":"GO:1900121"},{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor binding","termid":"GO:1905595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of low-density lipoprotein particle receptor binding","synonyms":[{"name":"down regulation of LDL receptor binding","type":"exact"},{"name":"down regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"down regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"down-regulation of LDL receptor binding","type":"exact"},{"name":"down-regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"downregulation of LDL receptor binding","type":"exact"},{"name":"downregulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"inhibition of LDL receptor binding","type":"narrow"},{"name":"inhibition of low-density lipoprotein particle receptor binding","type":"narrow"},{"name":"inhibition of low-density lipoprotein receptor binding","type":"narrow"},{"name":"negative regulation of LDL receptor binding","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:1905596"}


id: PATO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour to progress or fail to progress during it's life time.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002095 neoplasm disposition (obsolete PATO:0002095)","termid":"PATO:0002095"}


id: PBO:0072287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 5","termid":"PBO:0072287"}


id: GO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of signal transduction in another organism","synonyms":[{"name":"modulation of signal transduction in another organism","type":"exact"},{"name":"modulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044501"}


id: GO:0006547
data:
  {"annotated_genes":["SJAG_04747","SJAG_03775","SJAG_01137","SJAG_03055","SJAG_00592","SJAG_02400","SJAG_01346","SJAG_00248","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105726,75831,97779,103239,71327,78893,77329,74970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[99075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00248":null,"SJAG_00592":null,"SJAG_00832":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_02400":null,"SJAG_03055":null,"SJAG_03775":null,"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"histidine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Histidine"],"synonyms":[{"name":"histidine metabolism","type":"exact"}],"termid":"GO:0006547","terms_by_termid":{"GO:0000105":null,"GO:0052707":null}}


id: PBO:0060526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear autoantigenic sperm protein","termid":"PBO:0060526"}


id: PBO:0005091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8 (predicted)","termid":"PBO:0005091"}


id: SO:0001445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons ACN (ACT, ACC, ACA and ACG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine","synonyms":[{"name":"T","type":"exact"},{"name":"Thr","type":"exact"}],"termid":"SO:0001445"}


id: PBO:0054830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2243","termid":"PBO:0054830"}


id: PR:P56329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01020","PRO:DNx","PANTHER:PTHR23001:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.04c","secondary_identifiers":["UniProtKB:P56329"],"synonyms":[{"name":"Spom972h-EIF2S2","type":"exact"},{"name":"eIF-2-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56329"}


id: PBO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell","termid":"PBO:0030785"}


id: PBO:0009381
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position","termid":"PBO:0009381"}


id: GO:0048937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a lateral line glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell development","termid":"GO:0048937"}


id: PBO:0041818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 3","termid":"PBO:0041818"}


id: PBO:0068610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 61, pseudogene","termid":"PBO:0068610"}


id: PBO:0065330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 54","termid":"PBO:0065330"}


id: PBO:0051721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSM transcriptional repressor 2","termid":"PBO:0051721"}


id: PBO:0090040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec73","termid":"PBO:0090040"}


id: PBO:0061110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 2B","termid":"PBO:0061110"}


id: GO:0042988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to X11-like protein, a neuron-specific adaptor protein.","definition_xrefs":["PMID:12780348","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"X11-like protein binding","synonyms":[{"name":"X11L binding","type":"exact"}],"termid":"GO:0042988"}


id: PBO:0012303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 3, Pup3 (predicted)","termid":"PBO:0012303"}


id: GO:1902961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GOC:sjp","PMID:24577224","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","termid":"GO:1902959"},{"relation_name":"is_a","term_name":"positive regulation of amyloid precursor protein catabolic process","termid":"GO:1902993"},{"relation_name":"is_a","term_name":"positive regulation of aspartic-type peptidase activity","termid":"GO:1905247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"activation of aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor 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involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein 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aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein 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in APP catabolism","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902961"}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: PBO:0063159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 5","termid":"PBO:0063159"}


id: PBO:0062448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 115 pseudogene","termid":"PBO:0062448"}


id: PBO:0053753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 993","termid":"PBO:0053753"}


id: PBO:0068086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 392","termid":"PBO:0068086"}


id: GO:0090616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA 3'-end processing","termid":"GO:0090616"}


id: FYPO:0002774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during vegetative growth","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during vegetative growth","type":"related"},{"name":"increased level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"increased ubiquitinated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0002774"}


id: PBO:0051845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 1 pseudogene 1","termid":"PBO:0051845"}


id: PBO:0072525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 54","termid":"PBO:0072525"}


id: PR:000060241
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear fusion protein tht1 (Schizosaccharomyces pombe) that has been palmitoylated at positions equivalent to Cys-65 and Cys-78 of the amino acid sequence represented by UniProtKB:Q09684. Example: UniProtKB:Q09684, Cys-65/Cys-78, MOD:00047.","definition_xrefs":["PomBase:MLR","PRO:DAN","PMID:36650056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tht1/Palm-C65C78","synonyms":[{"name":"Spom-tht1/Palm:1","type":"exact"},{"name":"Tht1/Palm-C65C78","type":"exact"},{"name":"UniProtKB:Q09684, Cys-65/Cys-78, MOD:00115","type":"narrow"}],"termid":"PR:000060241"}


id: PBO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 2 receptor","termid":"PBO:0048703"}


id: PBO:0026779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0026779"}


id: PBO:0072294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 12","termid":"PBO:0072294"}


id: PBO:0090701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDOC related- Zinc finger, CCHC-type","termid":"PBO:0090701"}


id: GO:0004663
data:
  {"annotated_genes":["SJAG_03810","SJAG_04434","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73501,77619,96905],"is_not":false,"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family.","definition_xrefs":["GOC:mah","PMID:8621375","EC:2.5.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein geranylgeranyltransferase activity","termid":"GO:0004661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"Rab geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:RXN-19996","MetaCyc:RXN-19995","MetaCyc:RXN-19997"],"synonyms":[{"name":"GGTase-II activity","type":"exact"},{"name":"GGTaseII activity","type":"exact"},{"name":"Rab-protein geranylgeranyltransferase activity","type":"exact"},{"name":"RabGGTase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate,geranylgeranyl-diphosphate:protein-cysteine geranyltransferase activity","type":"exact"},{"name":"protein geranylgeranyltransferase type II activity","type":"exact"},{"name":"type II protein geranyl-geranyltransferase activity","type":"related"}],"termid":"GO:0004663","terms_by_termid":{"GO:0004663":null}}


id: GO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"positive regulation of hypersensitivity","termid":"GO:0002885"},{"relation_name":"positively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IV hypersensitivity","synonyms":[{"name":"activation of type IV hypersensitivity","type":"narrow"},{"name":"stimulation of type IV hypersensitivity","type":"narrow"},{"name":"up regulation of type IV hypersensitivity","type":"exact"},{"name":"up-regulation of type IV hypersensitivity","type":"exact"},{"name":"upregulation of type IV hypersensitivity","type":"exact"}],"termid":"GO:0001809"}


id: PBO:0041541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 99","termid":"PBO:0041541"}


id: GO:0034638
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112139],"is_not":false,"summary":null,"term":"GO:0034638"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine breakdown","type":"exact"},{"name":"phosphatidylcholine catabolism","type":"exact"},{"name":"phosphatidylcholine degradation","type":"exact"}],"termid":"GO:0034638","terms_by_termid":{"GO:0034638":null}}


id: PBO:0080270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 33 pseudogene","termid":"PBO:0080270"}


id: PBO:0034198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_ohnology_relationship_with","termid":"PBO:0034198"}


id: PBO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDIT4L antisense RNA 1","termid":"PBO:0044684"}


id: PBO:0077018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS4 antisense RNA 1","termid":"PBO:0077018"}


id: PBO:0080702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 6","termid":"PBO:0080702"}


id: PBO:0038667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 3","termid":"PBO:0038667"}


id: PBO:0069602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 879, pseudogene","termid":"PBO:0069602"}


id: PBO:0090666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme Ips1","termid":"PBO:0090666"}


id: PBO:0063476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 4","termid":"PBO:0063476"}


id: GO:0021850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of glioblasts in the subpallium. These cells will give rise to oligodendrocytes.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium glioblast cell division","synonyms":[{"name":"glioblast cell division in subpallium","type":"exact"},{"name":"glioblast division in ventral telencephalon","type":"exact"}],"termid":"GO:0021850"}


id: GO:0018034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-alanine amide by hydrolysis and oxidation of an interior Ala-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0081"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-alanine amidation (obsolete GO:0018034)","termid":"GO:0018034"}


id: GO:0048543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the phytochrome chromophore. The phytochrome chromophore is a linear tetrapyrrolic prosthetic group covalently attached to the large soluble protein phytochrome. Light absorption by the phytochrome chromophore triggers photoconversion between two spectrally distinct forms of the photoreceptor: Pr, the red light absorbing form, and Pfr, the far red light absorbing form.","definition_xrefs":["GOC:pj","PMID:2909515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phytochrome chromophore biosynthetic process","synonyms":[{"name":"phytochrome chromophore anabolism","type":"exact"},{"name":"phytochrome chromophore biosynthesis","type":"exact"},{"name":"phytochrome chromophore formation","type":"exact"},{"name":"phytochrome chromophore synthesis","type":"exact"}],"termid":"GO:0048543"}


id: PBO:0055326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2754","termid":"PBO:0055326"}


id: PBO:0003178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo70 (predicted)","termid":"PBO:0003178"}


id: FYPO:0002389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere outer repeat","secondary_identifiers":["FYPO:0005081"],"synonyms":[{"name":"normal protein localization at pericentromeric region","type":"related"},{"name":"normal protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization at centromere otr","type":"exact"},{"name":"normal protein localization at centromeric outer repeat region","type":"exact"},{"name":"normal protein localization at pericentric region","type":"related"},{"name":"normal protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal protein localization to chromatin at centromere otr","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at pericentric region","type":"related"},{"name":"normal protein localization to chromatin at pericentromeric region","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002389"}


id: FYPO:0001093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which chromatin binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished chromatin binding","synonyms":[{"name":"abolished chromatin association","type":"exact"},{"name":"chromatin binding abolished","type":"exact"}],"termid":"FYPO:0001093"}


id: FYPO:0005749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during glucose starvation","synonyms":[{"name":"decreased protein phosphorylation during glucose depletion","type":"exact"},{"name":"decreased protein phosphorylation during glucose deprivation","type":"exact"},{"name":"decreased protein phosphorylation during glucose limitation","type":"related"},{"name":"reduced protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0005749"}


id: GO:0030974
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"}]},"cv_name":"biological_process","definition":"The process in which thiamine pyrophosphate is transported across a membrane.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"thiamine transmembrane transport","termid":"GO:0071934"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"thiamine pyrophosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TPP transport","type":"exact"},{"name":"thiamin diphosphate transport","type":"exact"},{"name":"thiamin pyrophosphate transport","type":"exact"},{"name":"thiamine diphosphate transport","type":"exact"},{"name":"thiamine pyrophosphate transport","type":"narrow"}],"termid":"GO:0030974","terms_by_termid":{"GO:1990545":null}}


id: GO:0106021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"negatively_regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0140056"},{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0140056","GO:0008150"],"is_obsolete":false,"name":"negative regulation of vesicle docking","synonyms":[{"name":"negative regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106021"}


id: PBO:0029106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_proline_level","termid":"PBO:0029106"}


id: PBO:0110490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ibosomal protein L17 pseudogene 52","termid":"PBO:0110490"}


id: PR:O60073
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A synaptobrevin homolog YKT6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03838","PANTHER:PTHR21136:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptobrevin homolog ykt6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.11","secondary_identifiers":["UniProtKB:O60073"],"synonyms":[{"name":"Spom972h-YKT6","type":"exact"}],"termid":"PR:O60073"}


id: GO:0047958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + 2-oxoglutarate = glyoxylate + L-glutamate.","definition_xrefs":["MetaCyc:GLYCINE-AMINOTRANSFERASE-RXN","EC:2.6.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"glycine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["RHEA:14089"],"synonyms":[{"name":"L-glutamate:glyoxylate aminotransferase activity","type":"exact"},{"name":"glutamate-glyoxylate transaminase activity","type":"exact"},{"name":"glutamic-glyoxylic transaminase activity","type":"related"},{"name":"glycine aminotransferase activity","type":"broad"},{"name":"glycine transaminase activity","type":"broad"},{"name":"glyoxylate-glutamate aminotransferase activity","type":"related"},{"name":"glyoxylate-glutamic transaminase activity","type":"related"}],"termid":"GO:0047958"}


id: PBO:0056359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 1 interacting protein 1 like","termid":"PBO:0056359"}


id: GO:0018156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-threonine and peptidyl-cysteine by the synthesis of (2S,3S,6R)-3-methyl-lanthionine (3-methyl-L-lanthionine).","definition_xrefs":["RESID:AA0112"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2S,3S,6R)-3-methyl-lanthionine (obsolete GO:0018156)","termid":"GO:0018156"}


id: MOD:00972
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monobrominated L-phenylalanine, such as L-2'-bromophenylalanine.","definition_xrefs":["Unimod:340#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated L-phenylalanine","synonyms":[{"name":"Br1Phe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"bromination","type":"related"}],"termid":"MOD:00972"}


id: GO:0160005
data:
  {"annotated_genes":["SJAG_05414","SJAG_03930"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86924,103755],"is_not":false,"summary":null,"term":"GO:0160005"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex located in the endoplasmic reticulum (ER) involved in the correct folding of multipass membrane proteins in the ER membrane. In human, the substrate-binding Asterix (PAT10, WDR83OS) forms an obligate heterodimer with CCDC47.","definition_xrefs":["PMID:33960686","PMID:32814900","PMID:33082068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03930":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005789","GO:0032991","GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"PAT complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160005","terms_by_termid":{"GO:0160005":null}}


id: PBO:0014287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted GPI anchored","termid":"PBO:0014287"}


id: GO:0071624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of granulocyte chemotaxis. Granulocyte chemotaxis is the movement of a granulocyte in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"positively_regulates","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulocyte chemotaxis","termid":"GO:0071624"}


id: PBO:0038739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 11, pseudogene","termid":"PBO:0038739"}


id: GO:0052700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"ergothioneine metabolic process","termid":"GO:0052698"},{"relation_name":"is_a","term_name":"cellular modified histidine catabolic process","termid":"GO:0052702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"ergothioneine catabolic process","synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate catabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine breakdown","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine catabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine catabolism","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine degradation","type":"exact"},{"name":"ergothioneine breakdown","type":"exact"},{"name":"ergothioneine catabolism","type":"exact"},{"name":"ergothioneine degradation","type":"exact"}],"termid":"GO:0052700"}


id: PBO:0013033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 1","termid":"PBO:0013033"}


id: PBO:0069773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1056, pseudogene","termid":"PBO:0069773"}


id: PBO:0065839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 4","termid":"PBO:0065839"}


id: GO:0006778
data:
  {"annotated_genes":["SJAG_02876","SJAG_03173","SJAG_01841","SJAG_04944","SJAG_04397","SJAG_01192","SJAG_02896","SJAG_03961","SJAG_01786","SJAG_05283","SJAG_04109","SJAG_00097","SJAG_01155","SJAG_00366","SJAG_01372","SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77214,78609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[73961,100600,109125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[102000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[91960,112144,78525,90061,86667,67707,87996,91377],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[75907,71540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[74345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["GOC:jl","ISBN:0198506732","Wikipedia:Porphyrin#Natural_formation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"porphyrin metabolic process","type":"related"},{"name":"porphyrin metabolism","type":"related"}],"termid":"GO:0006778","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: FYPO:0002986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to ionizing radiation. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to ionizing radiation","synonyms":[{"name":"increased chromatin binding during cellular response to IR","type":"exact"}],"termid":"FYPO:0002986"}


id: FYPO:0002259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-leucine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal leucine import","synonyms":[{"name":"normal L-leucine import","type":"narrow"},{"name":"normal L-leucine import across plasma membrane","type":"exact"},{"name":"normal leucine import during mitotic cell cycle","type":"related"},{"name":"normal leucine import during vegetative growth","type":"exact"},{"name":"normal leucine import into cell","type":"exact"},{"name":"normal leucine uptake","type":"exact"}],"termid":"FYPO:0002259"}


id: PBO:0040585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-secretase 1","termid":"PBO:0040585"}


id: GO:0047165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flavonol 3-O-beta-D-glucoside + malonyl-CoA = malonyl-flavonol 3-O-beta-D-glucoside + CoA.","definition_xrefs":["EC:2.3.1.116","MetaCyc:2.3.1.116-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-malonyltransferase activity","termid":"GO:0050736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"flavonol-3-O-beta-glucoside O-malonyltransferase activity","secondary_identifiers":["RHEA:20085"],"synonyms":[{"name":"MAT-3","type":"related"},{"name":"flavonol 3-O-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:flavonol-3-O-beta-D-glucoside 6''-O-malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:flavonol-3-O-glucoside malonyltransferase activity","type":"related"}],"termid":"GO:0047165"}


id: PR:O13736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor, arginine/serine-rich 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein sla1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.01","secondary_identifiers":["UniProtKB:O13736"],"synonyms":[{"name":"SPAC16E8.01","type":"related"},{"name":"Spom972h-SCAF1","type":"exact"}],"termid":"PR:O13736"}


id: GO:0004430
data:
  {"annotated_genes":["SJAG_04537","SJAG_05330","SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75660,88857,106420],"is_not":false,"summary":null,"term":"GO:0004430"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol + ATP = 1-phosphatidyl-1D-myo-inositol 4-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.67","RHEA:19877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01571":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R03361","Reactome:R-HSA-1675883","Reactome:R-HSA-1675974","MetaCyc:1-PHOSPHATIDYLINOSITOL-KINASE-RXN","Reactome:R-HSA-1675780","Reactome:R-HSA-1676185","Reactome:R-HSA-1675813"],"synonyms":[{"name":"PI 4-kinase activity","type":"exact"},{"name":"PI kinase activity","type":"broad"},{"name":"PI4-kinase activity","type":"exact"},{"name":"PI4K","type":"exact"},{"name":"PI4K-alpha activity","type":"exact"},{"name":"PtdIns-4-kinase activity","type":"exact"},{"name":"phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"phosphatidylinositol kinase (phosphorylating) activity","type":"broad"},{"name":"phosphatidylinositol kinase activity","type":"broad"},{"name":"type II phosphatidylinositol kinase activity","type":"related"}],"termid":"GO:0004430","terms_by_termid":{"GO:0004430":null}}


id: GO:0043063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the intracellular bridge. An intracellular bridge is a direct link between the cytoplasms of sister cells that allows cells to communicate with one another.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular structure organization","termid":"GO:0043062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercellular bridge organization","synonyms":[{"name":"intercellular bridge organisation","type":"exact"},{"name":"intercellular bridge organization and biogenesis","type":"related"}],"termid":"GO:0043063"}


id: PBO:0078409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 3-1","termid":"PBO:0078409"}


id: PBO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates genes involved in vesicle mediated transport","termid":"PBO:0000495"}


id: GO:0102826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + kaempferol 3-O-glucoside = kaempferol 3,7-O-diglucoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"kaempferol-3-glucoside-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8270"],"termid":"GO:0102826"}


id: PBO:0083225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with the uncharacterized ORF YGR068C","termid":"PBO:0083225"}


id: PBO:0035903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation_during_vegetative_growth","termid":"PBO:0035903"}


id: PR:O59757
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein spc7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.02","synonyms":[{"name":"NMS complex subunit spc7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spc7","type":"exact"}],"termid":"PR:O59757"}


id: FYECO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which chloride ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cl ions","synonyms":[{"name":"chloride ions added","type":"exact"}],"termid":"FYECO:0000032"}


id: GO:0009187
data:
  {"annotated_genes":["SJAG_01428","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96560],"is_not":false,"summary":null,"term":"GO:0009187"},{"annotations":[111571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01428":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyclic nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0009187","terms_by_termid":{"GO:0006198":null,"GO:0009187":null}}


id: PBO:0090494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex WD repeat subunit Crb3","termid":"PBO:0090494"}


id: GO:0045582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell differentiation","synonyms":[{"name":"activation of T cell differentiation","type":"narrow"},{"name":"positive regulation of T cell development","type":"related"},{"name":"positive regulation of T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of T-cell differentiation","type":"exact"},{"name":"positive regulation of T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of T cell differentiation","type":"narrow"},{"name":"up regulation of T cell differentiation","type":"exact"},{"name":"up-regulation of T cell differentiation","type":"exact"},{"name":"upregulation of T cell differentiation","type":"exact"}],"termid":"GO:0045582"}


id: PBO:0088197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor involved in multidrug resistance; Zn(2)-Cys(6) zinc finger transcription factor; activates genes involved in multidrug resistance; paralog of Yrr1p, acting on an overlapping set of target genes","termid":"PBO:0088197"}


id: GO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved in the selection of the specific location within the template strand of an RNA polymerase II promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"regulates","term_name":"transcriptional start site selection at RNA polymerase II promoter","termid":"GO:0001174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"regulation of transcriptional start site selection at RNA polymerase II promoter","synonyms":[{"name":"regulation of transcription start site selection at RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001178"}


id: GO:0047135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-gamma-glutamyl-L-cysteine + NADP+ = bis-gamma-glutamylcystine + H+ + NADPH.","definition_xrefs":["RHEA:11980","EC:1.8.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"bis-gamma-glutamylcystine reductase activity","secondary_identifiers":["KEGG_REACTION:R02742","MetaCyc:1.6.4.9-RXN"],"synonyms":[{"name":"Bis-gamma-glutamylcystine reductase (NADPH)","type":"related"},{"name":"NADPH2:bis-gamma-glutamylcysteine oxidoreductase activity","type":"related"},{"name":"NADPH:bis-gamma-glutamylcysteine oxidoreductase activity","type":"related"},{"name":"bis-g-glutamylcystine reductase (NADPH) activity","type":"exact"},{"name":"bis-gamma-glutamylcystine reductase (NADPH) activity","type":"related"},{"name":"gamma-glutamylcysteine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047135"}


id: PBO:0068451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 27, pseudogene","termid":"PBO:0068451"}


id: PBO:0029987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation","termid":"PBO:0029987"}


id: PBO:0046890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM13A antisense RNA 1","termid":"PBO:0046890"}


id: GO:0070786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"positively_regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070786"}


id: PBO:0086149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear membrane fusion during karyogamy; localizes to the membrane with a soluble portion in the endoplasmic reticulum lumen, may form a complex with Jem1p and Kar2p; similar to zebrafish Brambleberry protein; expression of the gene is regulated by pheromone","termid":"PBO:0086149"}


id: _global:increased_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is present to a greater extent than in a preceding phase or process, where the experiment does not distinguish between increased addition and decreased removal of the modification (if this is known use the added_during or removed_during relation).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_during","termid":"_global:increased_during"}


id: PBO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2-like (predicted)","termid":"PBO:0000885"}


id: FYPO:0000831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of actinomycin D than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to actinomycin D","synonyms":[{"name":"resistance to actinomycin D during mitotic cell cycle","type":"related"},{"name":"resistance to actinomycin D during vegetative growth","type":"exact"},{"name":"resistant to actinomycin D","type":"exact"}],"termid":"FYPO:0000831"}


id: PBO:0061999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 2","termid":"PBO:0061999"}


id: PBO:0110046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Mtf2","termid":"PBO:0110046"}


id: FYPO:0001826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished sodium export","synonyms":[{"name":"abolished sodium export during mitotic cell cycle","type":"related"},{"name":"abolished sodium export from cell","type":"exact"},{"name":"abolished sodium ion export","type":"exact"},{"name":"sodium export abolished","type":"exact"},{"name":"sodium export abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001826"}


id: PBO:0029549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0029549"}


id: SO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double-stranded DNA used to control macromolecular structure and function.","direct_ancestors":[{"relation_name":"is_a","term_name":"ds_oligo","termid":"SO:0000442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_constraint_sequence","synonyms":[{"name":"DNA constraint","type":"exact"},{"name":"DNA constraint sequence","type":"exact"}],"termid":"SO:0001009"}


id: PBO:0082638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug2p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082638"}


id: PBO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4 (predicted)","termid":"PBO:0002271"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: _global:preceded_by
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"ends_after","termid":"_global:ends_after"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preceded_by","secondary_identifiers":["BFO:0000062"],"termid":"_global:preceded_by"}


id: PBO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_(obsolete_condition)","termid":"PBO:0034423"}


id: PBO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Region Maintenance","termid":"PBO:0001742"}


id: GO:0039639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The prevention or delay of host cell lysis by a pre-existing virus in response to a subsequent infection of the host cell by second virus.","definition_xrefs":["GOC:bm","PMID:22389108","GOC:jl","PMID:9560373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to virus","termid":"GO:0098586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host cell lysis in response to superinfection","synonyms":[{"name":"lysis inhibition","type":"broad"},{"name":"suppression by virus of host cell lysis in response to superinfecting virus","type":"exact"}],"termid":"GO:0039639"}


id: PBO:0091071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase Dcw1","termid":"PBO:0091071"}


id: PBO:0056542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L antisense RNA 1","termid":"PBO:0056542"}


id: GO:0102554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + a [2-oxoglutarate-dehydrogenase E2 protein] N6-octanoyl-L-lysine + 2 a sulfurated [sulfur carrier] = 2 L-methionine + 2 5'-deoxyadenosine + 2 H+ + a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine + 2 an unsulfurated [sulfur carrier].","definition_xrefs":["GOC:pz","EC:2.8.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoyl synthase activity (acting on 2-oxoglutarate-dehydrogenase E2 protein (obsolete GO:0102554)","termid":"GO:0102554"}


id: GO:0040015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organism to reach its usual body size.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organism growth","termid":"GO:0040014"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"multicellular organism growth","termid":"GO:0035264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of multicellular organism growth","synonyms":[{"name":"negative regulation of body growth","type":"exact"},{"name":"negative regulation of body size","type":"exact"}],"termid":"GO:0040015"}


id: PATO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape in which the bearer's surface is highly topographical with ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornamentation","termid":"PATO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornamented","termid":"PATO:0002441"}


id: GO:1903480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903480)","synonyms":[{"name":"regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903480"}


id: PBO:0028140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_18S_rRNA_level","termid":"PBO:0028140"}


id: PBO:0070657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 28","termid":"PBO:0070657"}


id: FYPO:0004271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cell septum edging catabolic process","synonyms":[{"name":"normal cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"normal cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"normal cell septum edging catabolism","type":"exact"},{"name":"normal cell septum edging hydrolysis","type":"exact"}],"termid":"FYPO:0004271"}


id: PBO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by hamster Dpagt1","termid":"PBO:0015256"}


id: PBO:0005444
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.2.10","termid":"PBO:0005444"}


id: PBO:0072593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoschisin 1","termid":"PBO:0072593"}


id: GO:0070638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleoside catabolic process","synonyms":[{"name":"pyridine nucleoside breakdown","type":"exact"},{"name":"pyridine nucleoside catabolism","type":"exact"},{"name":"pyridine nucleoside degradation","type":"exact"}],"termid":"GO:0070638"}


id: PBO:0043990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 3 receptor","termid":"PBO:0043990"}


id: PBO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-associated protein (predicted)","termid":"PBO:0004465"}


id: PBO:0090165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH quinone oxidoreductase/ARE-binding protein","termid":"PBO:0090165"}


id: GO:1990965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytosylglucuronic acid + H+ = cytosylarabinopyranose + CO2.","definition_xrefs":["GOC:pr","GOC:tb","PMID:23874663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cytosylglucuronate decarboxylase activity","termid":"GO:1990965"}


id: GO:0018602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorophenoxyacetate + 2-oxoglutarate + oxygen = 2,4-dichlorophenol + glyoxylate + succinate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity","secondary_identifiers":["RHEA:48984","MetaCyc:RXN-9863"],"termid":"GO:0018602"}


id: GO:1903852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cristae formation.","definition_xrefs":["PMID:19279012","GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrion organization","termid":"GO:0010822"},{"relation_name":"is_a","term_name":"regulation of cristae formation","termid":"GO:1903850"},{"relation_name":"positively_regulates","term_name":"cristae formation","termid":"GO:0042407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of cristae formation","synonyms":[{"name":"activation of cristae formation","type":"narrow"},{"name":"up regulation of cristae formation","type":"exact"},{"name":"up-regulation of cristae formation","type":"exact"},{"name":"upregulation of cristae formation","type":"exact"}],"termid":"GO:1903852"}


id: GO:0046089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytosine biosynthetic process","synonyms":[{"name":"cytosine anabolism","type":"exact"},{"name":"cytosine biosynthesis","type":"exact"},{"name":"cytosine formation","type":"exact"},{"name":"cytosine synthesis","type":"exact"}],"termid":"GO:0046089"}


id: PBO:0048356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 67","termid":"PBO:0048356"}


id: GO:0008237
data:
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id: CHEBI:27732
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine","termid":"CHEBI:27732"}


id: PBO:0046716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 2","termid":"PBO:0046716"}


id: PBO:0077102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 9","termid":"PBO:0077102"}


id: GO:0006851
data:
  {"annotated_genes":["SJAG_03399","SJAG_03873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91235,92930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"}]},"cv_name":"biological_process","definition":"The process in which a calcium ion (Ca2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03399":null,"SJAG_03873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial calcium transport","type":"exact"}],"termid":"GO:0006851","terms_by_termid":{"GO:0036444":null}}


id: PBO:0091090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Gsk31","termid":"PBO:0091090"}


id: PBO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0001378"}


id: FYPO:0002994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic S phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic S phase","type":"exact"},{"name":"increased protein localization to chromatin during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0002994"}


id: GO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a trace amine to initiate a change in cell activity. Trace amines are biogenic amines that are synthesized from aromatic amino acids and are substrates for monoamine oxidase, and are therefore detectable only at trace levels in mammals.","definition_xrefs":["GOC:mah","PMID:19325074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"trace-amine receptor activity","termid":"GO:0001594"}


id: GO:1901991
data:
  {"annotated_genes":["SJAG_03695","SJAG_04671","SJAG_02074","SJAG_06592","SJAG_02026","SJAG_04943","SJAG_02169","SJAG_00071","SJAG_02592","SJAG_03026","SJAG_01118","SJAG_00082","SJAG_00640","SJAG_04287","SJAG_01297","SJAG_03591","SJAG_03353","SJAG_04332","SJAG_03942","SJAG_02098","SJAG_01330","SJAG_04999","SJAG_00526","SJAG_00318","SJAG_02858","SJAG_02451","SJAG_01082","SJAG_01605","SJAG_02563","SJAG_01044","SJAG_05373","SJAG_03073","SJAG_04280","SJAG_01210","SJAG_00996","SJAG_04259","SJAG_03602","SJAG_04597","SJAG_04126","SJAG_04699","SJAG_01084","SJAG_00169","SJAG_05346","SJAG_01076","SJAG_04884","SJAG_03160","SJAG_01837","SJAG_00991","SJAG_01855","SJAG_02576","SJAG_03067","SJAG_03854","SJAG_03048","SJAG_01205","SJAG_01873","SJAG_01146","SJAG_02723","SJAG_01401","SJAG_03927","SJAG_02336","SJAG_01429","SJAG_00883","SJAG_01010","SJAG_00364","SJAG_02392","SJAG_00600","SJAG_02771","SJAG_01680","SJAG_04394","SJAG_03681","SJAG_03126","SJAG_01679","SJAG_02332","SJAG_02266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111088,99348,86433,109030,102618,95103,109504,103613,107238],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[96938,111194,96035,85725,90034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[78096,102016,74485,112260,71255,112419,94890,89598,96036,107312,77749,71989,94730,104660,111252,111975,87102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[97835,84705,111090,97124,104239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[105007,86982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[90166,93988,111196,91449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[84879,71991,112178,96037,102017,107009,78113,104661,94891,85944,74673,87103,87457,96556,112841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[109734,97286,101720,105239,110741,94965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[88487,97842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[88962,94424,87403,87807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[103928,88565,99942,102046,106718,107745,89994,102404,109700,89205,96499,107103,106848,88848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[89827],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[111850],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any 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regulation of mitotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"down regulation of mitotic cell cycle phase transition","type":"exact"},{"name":"down-regulation of mitotic cell cycle phase transition","type":"exact"},{"name":"downregulation of mitotic cell cycle phase transition","type":"exact"},{"name":"inhibition of mitotic cell cycle phase transition","type":"narrow"}],"termid":"GO:1901991","terms_by_termid":{"GO:0001100":null,"GO:0007094":null,"GO:0007095":null,"GO:0010972":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0033314":null,"GO:0044878":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000134":null}}


id: GO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of cardiac atrium muscle is generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial cardiac muscle tissue development","termid":"GO:0003228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue morphogenesis","synonyms":[{"name":"atrial heart muscle morphogenesis","type":"exact"},{"name":"atrial myocardium morphogenesis","type":"exact"},{"name":"cardiac atrium muscle morphogenesis","type":"exact"}],"termid":"GO:0055009"}


id: GO:0036478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacts with and increases L-dopa decarboxylase activity.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"L-dopa decarboxylase activator activity","synonyms":[{"name":"DDC activator activity","type":"exact"}],"termid":"GO:0036478"}


id: PBO:0085854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)- fusion protein localizes to the mother side of the bud neck and the vacuole; YOL007C is not an essential gene","termid":"PBO:0085854"}


id: PBO:0072250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 25","termid":"PBO:0072250"}


id: GO:0035172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hemocytes, resulting in the expansion of the cell population. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte proliferation","synonyms":[{"name":"arthropod blood cell proliferation","type":"exact"}],"termid":"GO:0035172"}


id: GO:0120216
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cartilage extracellular matrix complex that mediates interactions between major components of the extracellular matrix such as collagens and proteoglycans and contributes to their fibrillar network. Exists as an obligate homotrimer.","definition_xrefs":["GOC:bhm","PMID:15075323","PMID:10367731","PMID:9699631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"matrilin complex","synonyms":[{"name":"matrilin family complex","type":"related"},{"name":"matrilin-1 complex","type":"narrow"},{"name":"matrilin-2 complex","type":"narrow"},{"name":"matrilin-3 complex","type":"narrow"},{"name":"matrilin-4 complex","type":"narrow"}],"termid":"GO:0120216"}


id: PBO:0060378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin regulatory factor","termid":"PBO:0060378"}


id: PBO:0082501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase delta; responsible for most of lagging strand DNA synthesis; required for chromosomal DNA replication during mitosis and meiosis, intragenic recombination, repair of double strand DNA breaks, and DNA replication during nucleotide excision repair (NER)","termid":"PBO:0082501"}


id: GO:0030193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of coagulation","termid":"GO:0050818"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood coagulation","termid":"GO:0030193"}


id: GO:2000950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"positively_regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xyloglucan metabolic process","synonyms":[{"name":"positive regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000950"}


id: PBO:0079251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC23 antisense RNA 1","termid":"PBO:0079251"}


id: PBO:0028481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activation_of_monopolar_cell_growth_at_new_end","termid":"PBO:0028481"}


id: PBO:0054857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2271","termid":"PBO:0054857"}


id: MOD:01068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tryptophan residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tryptophan","synonyms":[{"name":"HalTrp","type":"exact"}],"termid":"MOD:01068"}


id: PBO:0085987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for normal growth rate at 15 degrees C; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; mtc4 is synthetically sick with cdc13-1","termid":"PBO:0085987"}


id: PBO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein, HSR1-related (predicted)","termid":"PBO:0001769"}


id: PBO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1 pseudogene 3","termid":"PBO:0051633"}


id: PBO:0026853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_centromere_inner_repeat","termid":"PBO:0026853"}


id: PBO:0052412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1","termid":"PBO:0052412"}


id: GO:1900394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of kojic acid biosynthetic process","synonyms":[{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"regulation of C6H6O4 anabolism","type":"related"},{"name":"regulation of C6H6O4 biosynthesis","type":"related"},{"name":"regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"regulation of C6H6O4 formation","type":"related"},{"name":"regulation of C6H6O4 synthesis","type":"related"},{"name":"regulation of kojic acid anabolism","type":"exact"},{"name":"regulation of kojic acid biosynthesis","type":"exact"},{"name":"regulation of kojic acid formation","type":"exact"},{"name":"regulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900394"}


id: PBO:0069421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 684, pseudogene","termid":"PBO:0069421"}


id: FYPO:0003308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during interphase of the cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during interphase","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during interphase","type":"exact"},{"name":"normal protein localization to mitotic SPB during interphase","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during mitotic interphase","type":"exact"},{"name":"normal protein localization to spindle pole body during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0003308"}


id: FYPO:0000159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome condensation is abnormal. Chromosome condensation is the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division.","definition_xrefs":["PomBase:mah","GO:0030261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"abnormal chromosome condensation","secondary_identifiers":["FYPO:0000028"],"synonyms":[{"name":"chromosome condensation defects","type":"exact"}],"termid":"FYPO:0000159"}


id: PBO:0091957
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HEF3","termid":"PBO:0091957"}


id: GO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene + 1/2 O2 = 3-hydroxytoluene.","definition_xrefs":["UM-BBD_enzymeID:e0224"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene 3-monooxygenase activity (obsolete GO:0018657)","termid":"GO:0018657"}


id: PBO:0045868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 1","termid":"PBO:0045868"}


id: PBO:0049103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 160","termid":"PBO:0049103"}


id: GO:0090288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"negatively_regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"}


id: PBO:0079000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (AGT) 7-1","termid":"PBO:0079000"}


id: PBO:0051971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts with SUPT6H, CTD assembly factor 1","termid":"PBO:0051971"}


id: FYPO:0001629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular methionine level","termid":"FYPO:0001639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar methionine level","synonyms":[{"name":"normal level of methionine in vacuole","type":"exact"},{"name":"normal vacuolar L-methionine level","type":"exact"},{"name":"normal vacuolar methionine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar methionine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001629"}


id: PBO:0046939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member A","termid":"PBO:0046939"}


id: PATO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000478 poor value (obsolete PATO:0000478)","termid":"PATO:0000478"}


id: PR:O60112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.03 gene.","definition_xrefs":["UniProtKB:O60112","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Rab geranylgeranyltransferase C15C4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.03","synonyms":[{"name":"Spom972h-SPBC15C4.03","type":"exact"}],"termid":"PR:O60112"}


id: PBO:0003180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Brc1","termid":"PBO:0003180"}


id: SO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GNAACR, bound by the transcription factor complex PBF (PCB-binding factor) and found in promoters of genes expressed during the M/G1 transition of the cell cycle.","definition_xrefs":["PMID:12411492","GO:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCB","termid":"SO:0001871"}


id: GO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of biotic stimulus","secondary_identifiers":["GO:0009596"],"synonyms":[{"name":"perception of biotic stimulus","type":"related"}],"termid":"GO:0009595"}


id: PBO:0065388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 2","termid":"PBO:0065388"}


id: FYPO:0003182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids are not segregated equally to the two spindle poles in the second meiotic nuclear division.","definition_xrefs":["PMID:10440376","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal meiotic chromosome segregation","termid":"FYPO:0000925"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"unequal meiotic sister chromatid segregation","secondary_identifiers":["FYPO:0003605"],"synonyms":[{"name":"abnormal chromosome disjunction during meiosis II","type":"exact"},{"name":"abnormal meiotic sister chromatid disjunction","type":"exact"},{"name":"chromosome non-disjunction at meiosis II","type":"related"},{"name":"chromosome nondisjunction at meiosis II","type":"related"},{"name":"chromosome nondisjunction during meiosis II","type":"related"},{"name":"meiosis II nondisjunction","type":"related"},{"name":"nondisjunction at meiosis II","type":"exact"},{"name":"nondisjunction of sister chromatids in meiosis II","type":"exact"},{"name":"unequal meiotic chromosome segregation during meiosis II","type":"exact"}],"termid":"FYPO:0003182"}


id: PBO:0041217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 5","termid":"PBO:0041217"}


id: GO:1904892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GO_REF:0000058","GOC:rjd","GOC:TermGenie","PMID:24587195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via STAT","synonyms":[{"name":"regulation of STAT signalling pathway","type":"exact"},{"name":"regulation of kinase activated-STAT cascade","type":"exact"},{"name":"regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904892"}


id: PR:O59785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC320.08 gene.","definition_xrefs":["UniProtKB:O59785","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized solute carrier family 35 member C320.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.08","synonyms":[{"name":"Spom972h-SPCC320.08","type":"exact"}],"termid":"PR:O59785"}


id: PBO:0045685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 5","termid":"PBO:0045685"}


id: PBO:0083500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR083W","termid":"PBO:0083500"}


id: GO:0006100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving intermediates of the tricarboxylic acid cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tricarboxylic acid cycle intermediate metabolic process (obsolete GO:0006100)","synonyms":[{"name":"Krebs cycle intermediate metabolic process","type":"exact"},{"name":"Krebs cycle intermediate metabolism","type":"exact"},{"name":"TCA intermediate metabolic process","type":"exact"},{"name":"TCA intermediate metabolism","type":"exact"},{"name":"citric acid cycle intermediate metabolic process","type":"exact"},{"name":"citric acid cycle intermediate metabolism","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolic process","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolism","type":"exact"}],"termid":"GO:0006100"}


id: GO:0021763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the subthalamic nucleus over time from its initial formation until its mature state. The subthalamic nucleus is the lens-shaped nucleus located in the ventral part of the subthalamus on the inner aspect of the internal capsule that is concerned with the integration of somatic motor function.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","ISBN:0878937420","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"subthalamus development","termid":"GO:0021539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subthalamic nucleus development","synonyms":[{"name":"corpus luysi development","type":"related"}],"termid":"GO:0021763"}


id: PATO:0000602
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000602 angle value (obsolete PATO:0000602)","termid":"PATO:0000602"}


id: GO:0120223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the larynx is generated and organized. The larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.","definition_xrefs":["PMID:28177282","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"larynx development","termid":"GO:0120224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larynx morphogenesis","synonyms":[{"name":"laryngeal morphogenesis","type":"exact"}],"termid":"GO:0120223"}


id: PBO:0076847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tescalcin","termid":"PBO:0076847"}


id: PBO:0041405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 120","termid":"PBO:0041405"}


id: PBO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 20","termid":"PBO:0050318"}


id: PBO:0080873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YME1L1 pseudogene 1","termid":"PBO:0080873"}


id: PBO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8A","termid":"PBO:0043664"}


id: PBO:0045392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 3","termid":"PBO:0045392"}


id: PR:O75004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc24 gene.","definition_xrefs":["UniProtKB:O75004","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.07c","synonyms":[{"name":"Spom972h-cdc24","type":"exact"}],"termid":"PR:O75004"}


id: GO:0061201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted gamma-aminobutyric acid transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle","termid":"GO:0061200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle lumen","synonyms":[{"name":"clathrin sculpted GABA transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted gamma-aminobutyric acid transport vesicle lumen","type":"exact"}],"termid":"GO:0061201"}


id: GO:0033196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tryparedoxin + hydrogen peroxide = tryparedoxin disulfide + H2O.","definition_xrefs":["PMID:32388269","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tryparedoxin peroxidase activity","secondary_identifiers":["MetaCyc:1.11.1.15-RXN"],"synonyms":[{"name":"TXNPx activity","type":"exact"}],"termid":"GO:0033196"}


id: PBO:0076478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP binding protein","termid":"PBO:0076478"}


id: PBO:0087912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in iron utilization and homeostasis; binds consensus site PyPuCACCCPu and activates transcription in response to changes in iron availability; in iron-replete conditions localization is regulated by Grx3p, Grx4p, and Fra2p, and promoter binding is negatively regulated via Grx3p-Grx4p binding; AFT1 has a paralog, AFT2, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087912"}


id: GO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen in association with an MHC class Ib protein complex on its cell surface, including lipid extraction, degradation, and transport steps for the lipid antigen both prior to and following assembly with the MHC protein complex. The lipid antigen may originate from an endogenous or exogenous source of lipid. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["GOC:add","PMID:10375559","PMID:15928680","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, lipid antigen","type":"exact"},{"name":"lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048003"}


id: FYPO:0000719
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114507],"is_not":false,"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal fatty acid synthase activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"synonyms":[{"name":"normal FAS activity","type":"exact"}],"termid":"FYPO:0000719","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:0034553
data:
  {"annotated_genes":["SJAG_01895","SJAG_03574","SJAG_07005","SJAG_00703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70838,77020,94788,102869],"is_not":false,"summary":null,"term":"GO:0034553"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex II, in the mitochondrial inner membrane.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"},{"relation_name":"is_a","term_name":"respiratory chain complex II assembly","termid":"GO:0034552"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00703":null,"SJAG_01895":null,"SJAG_03574":null,"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007005","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0034553","terms_by_termid":{"GO:0034553":null}}


id: FYPO:0000804
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114267,114513,114518,114520],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[114367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[114371],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[114268,114426,114626,114634,114427,114419,114627,114420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[114186,114183,114174,114172,114171],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"},{"annotations":[114182,114170,114169,114173,114177,114185],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[114361],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endomembrane system organization is abnormal. 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S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal endomembrane system organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_03892","SJAG_05207","SJAG_04464","SJAG_04284","SJAG_01242","SJAG_02763","SJAG_01906","SJAG_03891","SJAG_03940","SJAG_03449","SJAG_00426","SJAG_01745"],"single_locus_genotype_uniquenames":["alx1delta","ned1delta","cmp7delta","nup61delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","lem2delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","vps4delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","vps32delta"],"synonyms":[{"name":"abnormal endomembrane system organisation","type":"exact"},{"name":"abnormal endomembrane system organization during mitotic cell cycle","type":"related"},{"name":"abnormal endomembrane system organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000804","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0006433":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0069571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 843, pseudogene","termid":"PBO:0069571"}


id: GO:1902252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","PMID:14569084","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"regulation of erythrocyte apoptotic process","termid":"GO:1902250"},{"relation_name":"positively_regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte apoptotic process","synonyms":[{"name":"activation of RBC apoptosis","type":"narrow"},{"name":"activation of RBC apoptotic process","type":"narrow"},{"name":"activation of erythrocyte apoptosis","type":"narrow"},{"name":"activation of erythrocyte apoptotic process","type":"narrow"},{"name":"activation of red blood cell apoptosis","type":"narrow"},{"name":"activation of red blood cell apoptotic process","type":"narrow"},{"name":"positive regulation of RBC apoptosis","type":"narrow"},{"name":"positive regulation of RBC apoptotic process","type":"exact"},{"name":"positive regulation of erythrocyte apoptosis","type":"narrow"},{"name":"positive regulation of red blood cell apoptosis","type":"narrow"},{"name":"positive regulation of red blood cell apoptotic process","type":"exact"},{"name":"up regulation of RBC apoptosis","type":"narrow"},{"name":"up regulation of RBC apoptotic process","type":"exact"},{"name":"up regulation of erythrocyte apoptosis","type":"narrow"},{"name":"up regulation of erythrocyte apoptotic process","type":"exact"},{"name":"up regulation of red blood cell apoptosis","type":"narrow"},{"name":"up regulation of red blood cell apoptotic process","type":"exact"},{"name":"up-regulation of RBC apoptosis","type":"narrow"},{"name":"up-regulation of RBC apoptotic process","type":"exact"},{"name":"up-regulation of erythrocyte apoptosis","type":"narrow"},{"name":"up-regulation of erythrocyte apoptotic process","type":"exact"},{"name":"up-regulation of red blood cell apoptosis","type":"narrow"},{"name":"up-regulation of red blood cell apoptotic process","type":"exact"},{"name":"upregulation of RBC apoptosis","type":"narrow"},{"name":"upregulation of RBC apoptotic process","type":"exact"},{"name":"upregulation of erythrocyte apoptosis","type":"narrow"},{"name":"upregulation of erythrocyte apoptotic process","type":"exact"},{"name":"upregulation of red blood cell apoptosis","type":"narrow"},{"name":"upregulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902252"}


id: GO:0031315
data:
  {"annotated_genes":["SJAG_00655"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102597],"is_not":false,"summary":null,"term":"GO:0031315"}]},"cv_name":"cellular_component","definition":"The component of a mitochondrial outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"mitochondrial outer membrane","termid":"GO:0005741"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00655":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to mitochondrial outer membrane","type":"narrow"}],"termid":"GO:0031315","terms_by_termid":{"GO:0031315":null}}


id: GO:0051617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of histamine uptake","termid":"GO:0051616"},{"relation_name":"negatively_regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of histamine uptake","synonyms":[{"name":"down regulation of histamine uptake","type":"exact"},{"name":"down-regulation of histamine uptake","type":"exact"},{"name":"downregulation of histamine uptake","type":"exact"},{"name":"negative regulation of histamine import","type":"exact"}],"termid":"GO:0051617"}


id: PBO:0044831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 118","termid":"PBO:0044831"}


id: GO:1903472
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99148],"is_not":false,"summary":null,"term":"GO:1903472"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:1234","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cytokinetic process","termid":"GO:1903437"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring contraction","termid":"GO:1903471"},{"relation_name":"negatively_regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"down-regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"downregulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"inhibition of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of mitotic actomyosin contractile ring contraction","type":"narrow"},{"name":"negative regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1903472","terms_by_termid":{"GO:1903472":null}}


id: GO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attaching of a chitin-containing cuticle to the epithelium underlying it. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle attachment to epithelium","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"}],"termid":"GO:0040005"}


id: GO:0034088
data:
  {"annotated_genes":["SJAG_00682"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77003],"is_not":false,"summary":null,"term":"GO:0034088"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"mitotic cohesion stability","type":"related"}],"termid":"GO:0034088","terms_by_termid":{"GO:0034088":null}}


id: PR:Q9HGQ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cis4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGQ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc transporter cis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.03c","synonyms":[{"name":"Spom972h-cis4","type":"exact"}],"termid":"PR:Q9HGQ3"}


id: PBO:0053995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1317","termid":"PBO:0053995"}


id: PBO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RECombination deficient","termid":"PBO:0016541"}


id: PBO:0059713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 21","termid":"PBO:0059713"}


id: PBO:0084999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAP family histone chaperone; binds to histones and Rtt109p, stimulating histone acetyltransferase activity; possesses nucleosome assembly activity in vitro; proposed role in vacuolar protein sorting and in double-strand break repair; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084999"}


id: PBO:0039063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGK divergent transcript","termid":"PBO:0039063"}


id: GO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipopolysaccharide and transmitting the signal across the cell membrane to initiate an innate immune response. Lipopolysaccharides (LPS) are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["PMID:15379975","PMID:14609719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"lipopolysaccharide immune receptor activity","synonyms":[{"name":"LPS receptor activity","type":"exact"},{"name":"endotoxin receptor activity","type":"broad"},{"name":"lipopolysaccharide receptor activity","type":"broad"}],"termid":"GO:0001875"}


id: GO:1901320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heart induction.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of heart induction","termid":"GO:0090381"},{"relation_name":"negatively_regulates","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart induction","synonyms":[{"name":"down regulation of heart induction","type":"exact"},{"name":"down-regulation of heart induction","type":"exact"},{"name":"downregulation of heart induction","type":"exact"},{"name":"inhibition of heart induction","type":"narrow"}],"termid":"GO:1901320"}


id: PBO:0087650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterodimeric FACT complex (Spt16p-Pob3p); FACT associates with chromatin via interaction with Nhp6Ap and Nhp6Bp, and reorganizes nucleosomes to facilitate access to DNA by RNA and DNA polymerases; protein abundance increases in response to DNA replication stress","termid":"PBO:0087650"}


id: PBO:0085184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three repressible acid phosphatases; glycoprotein that is transported to the cell surface by the secretory pathway; induced by phosphate starvation and coordinately regulated by PHO4 and PHO2; PHO11 has a paralog, PHO12, that arose from a segmental duplication","termid":"PBO:0085184"}


id: PBO:0062813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 4","termid":"PBO:0062813"}


id: PBO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB3 pseudogene 1","termid":"PBO:0045906"}


id: PBO:0024844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-independent, nickel dependent urease Ure2","termid":"PBO:0024844"}


id: GO:0048165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the antral spaces fuse to form a single antral space. The oocyte is suspended in the cumulus oophorous and the first polar body in the perivitelline space.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198542771","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fused antrum stage","synonyms":[{"name":"mammalian oogenesis stage 8","type":"exact"}],"termid":"GO:0048165"}


id: GO:0016528
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"sarcoplasm","secondary_identifiers":["Wikipedia:Sarcoplasm"],"termid":"GO:0016528"}


id: GO:0044206
data:
  {"annotated_genes":["SJAG_04713","SJAG_00533","SJAG_04354","SJAG_04709","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83270,84233,87634,88608,110137],"is_not":false,"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"Any process which produces UMP, uridine monophosphate, from derivatives of it (e.g. cytidine, uridine, cytosine) without de novo synthesis.","definition_xrefs":["GOC:ecd","PMID:15096496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP biosynthetic process","termid":"GO:0006222"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide salvage","termid":"GO:0010138"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UMP biosynthesis via nucleoside salvage pathway","type":"exact"},{"name":"UMP biosynthetic process via nucleoside salvage pathway","type":"exact"}],"termid":"GO:0044206","terms_by_termid":{"GO:0044206":null}}


id: PBO:0049374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 4","termid":"PBO:0049374"}


id: PATO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling the form of a paddle.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paddle shaped","termid":"PATO:0005003"}


id: GO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling proline to prolyl-tRNA in a mitochondrion, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolyl-tRNA aminoacylation","termid":"GO:0006433"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"mitochondrial prolyl-tRNA aminoacylation","termid":"GO:0070157"}


id: SO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized from RNA by reverse transcriptase, single stranded.","direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA","termid":"SO:0000756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_cDNA","synonyms":[{"name":"single strand cDNA","type":"exact"},{"name":"single stranded cDNA","type":"exact"},{"name":"single-strand cDNA","type":"related"}],"termid":"SO:0000757"}


id: PBO:0082313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the eIF2 translation initiation factor complex; regulates translational initiation; conserved residues of this ATP-Grasp protein that bind to ATP-Mg2+ in the pombe ortholog are required for complex assembly in budding yeast; interaction with eIF2 subunit Gcd11p facilitates complex assembly and activity; required for the START transition and timely progression through G2; regulated by nutrient availability; human ortholog complements the yeast mutant","termid":"PBO:0082313"}


id: FYPO:0003503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal length.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal vegetative cell length","synonyms":[{"name":"normal cell length during vegetative growth","type":"exact"},{"name":"normal vegetative cell length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003503"}


id: PBO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substrate_is","termid":"PBO:0000015"}


id: PBO:0081239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 8","termid":"PBO:0081239"}


id: PBO:0052682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 50","termid":"PBO:0052682"}


id: GO:0015634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lipopolysaccharide from the inside of the cell to the outside of the cell across a membrane. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete lipopolysaccharide exporter activity (obsolete GO:0015634)","synonyms":[{"name":"LPS exporter activity","type":"exact"}],"termid":"GO:0015634"}


id: GO:0044311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense granule-like organelle of the apical complex of merozoites, released into the parasitophorous vacuole, mediating protease-dependent rupture and parasite exit from the infected erythrocyte.","definition_xrefs":["PMID:18083092","PMID:18083098","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"exoneme","termid":"GO:0044311"}


id: FYPO:0003428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize arginine or cysteine, and therefore requires arginine and cysteine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for arginine","termid":"FYPO:0000035"},{"relation_name":"is_a","term_name":"growth auxotrophic for cysteine","termid":"FYPO:0000037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for arginine and cysteine","synonyms":[{"name":"arginine and cysteine auxotrophy","type":"exact"},{"name":"growth auxotrophic for arginine and cysteine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for arginine and cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0003428"}


id: PBO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARGinine requiring","termid":"PBO:0036483"}


id: GO:0002581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002581"}


id: PBO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.119","termid":"PBO:0000887"}


id: GO:0035193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reorganization of the pre-existing, functional larval central nervous system into one that can serve the novel behavioral needs of the adult. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:9647692","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval central nervous system remodeling","synonyms":[{"name":"CNS metamorphosis","type":"exact"},{"name":"central nervous system metamorphosis","type":"exact"},{"name":"larval central nervous system remodelling","type":"exact"}],"termid":"GO:0035193"}


id: GO:0003813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ser bond in complement component C3 alpha-chain to form C3a and C3b, and Arg bond in complement component C5 alpha-chain to form C5a and C5b.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete classical-complement-pathway C3/C5 convertase activity (obsolete GO:0003813)","synonyms":[{"name":"C3 convertase activity","type":"broad"},{"name":"C42","type":"related"},{"name":"C423","type":"related"},{"name":"C4b,2a","type":"related"},{"name":"C4b,2a,3b","type":"related"},{"name":"C5 convertase activity","type":"broad"},{"name":"classical-complement-pathway C3/C5 convertase activity","type":"exact"},{"name":"complement C2 activity","type":"broad"},{"name":"complement C3 convertase activity","type":"related"},{"name":"complement C42","type":"related"}],"termid":"GO:0003813"}


id: PBO:0090473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II, and III complex subunit Trs23","termid":"PBO:0090473"}


id: GO:0030226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an apolipoprotein to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein receptor activity","termid":"GO:0030226"}


id: PBO:0013051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fhl1","termid":"PBO:0013051"}


id: GO:0019661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, via canonical glycolysis, yielding energy in the form of adenosine triphosphate (ATP).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glucose catabolic process to lactate via pyruvate","secondary_identifiers":["MetaCyc:ANAEROFRUCAT-PWY"],"synonyms":[{"name":"glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"homofermentation","type":"exact"},{"name":"homofermentative lactate fermentation","type":"exact"},{"name":"homofermentative pathway","type":"exact"},{"name":"homolactate fermentation","type":"exact"},{"name":"homolactic fermentation","type":"exact"}],"termid":"GO:0019661"}


id: PBO:0075774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 2","termid":"PBO:0075774"}


id: GO:0006122
data:
  {"annotated_genes":["SJAG_02646","SJAG_00601","SJAG_03490","SJAG_00080","SJAG_01763","SJAG_MIT03","SJAG_01490","SJAG_00755","SJAG_02744","SJAG_07006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74976,75326,85705,99533,103333,108649,110313,112814,113265,114125],"is_not":false,"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial electron transport, ubiquinol to cytochrome c","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"complex III (ubiquinone to cytochrome c)","type":"related"}],"termid":"GO:0006122","terms_by_termid":{"GO:0006122":null}}


id: PBO:0017442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_activity_of","termid":"PBO:0017442"}


id: GO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of sparing immature T cells which react with self-MHC protein complexes with low affinity levels from apoptotic death.","definition_xrefs":["ISBN:0781735149","PMID:12414722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive T cell selection","synonyms":[{"name":"positive T lymphocyte selection","type":"exact"},{"name":"positive T-cell selection","type":"exact"},{"name":"positive T-lymphocyte selection","type":"exact"}],"termid":"GO:0043368"}


id: PR:Q9UT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC513.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C513.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.07","synonyms":[{"name":"Spom972h-SPAC513.07","type":"exact"}],"termid":"PR:Q9UT59"}


id: GO:0038032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The signaling process in which G protein-coupled receptor signaling is brought to an end. For example, through the action of GTPase-activating proteins (GAPs) that act to accelerate hydrolysis of GTP to GDP on G-alpha proteins, thereby terminating the transduced signal.","definition_xrefs":["GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of signal transduction","termid":"GO:0023021"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"termination of G protein-coupled receptor signaling pathway","synonyms":[{"name":"termination of G-protein coupled receptor signaling pathway","type":"exact"},{"name":"termination of G-protein coupled receptor signalling pathway","type":"exact"},{"name":"termination of GPCR signaling pathway","type":"exact"}],"termid":"GO:0038032"}


id: GO:0106019
data:
  {"annotated_genes":["SJAG_03375","SJAG_00063","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74560,73520,74738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol phosphate + phosphate.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate phosphatase activity","termid":"GO:0034593"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate phosphatase activity","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0106019","terms_by_termid":{"GO:0004439":null}}


id: PBO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWm associated Phd1","termid":"PBO:0000775"}


id: GO:0097577
data:
  {"annotated_genes":["SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006880"}]},"cv_name":"biological_process","definition":"The process of binding or confining iron ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mr","PMID:3099306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of metal ion","termid":"GO:0051238"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"intracellular iron ion homeostasis","termid":"GO:0006879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sequestering of iron ion","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"iron ion retention","type":"exact"},{"name":"iron ion sequestering","type":"exact"},{"name":"iron ion sequestration","type":"exact"},{"name":"iron ion storage","type":"exact"},{"name":"retention of iron ion","type":"exact"},{"name":"sequestration of iron ion","type":"exact"},{"name":"storage of iron ion","type":"exact"}],"termid":"GO:0097577","terms_by_termid":{"GO:0006880":null}}


id: PBO:0041102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basigin (Ok blood group)","termid":"PBO:0041102"}


id: PBO:0067106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 148, pseudogene","termid":"PBO:0067106"}


id: PBO:0082690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the heterotetrameric MHF histone-fold complex; in humans the MHF complex interacts with both DNA and Mph1p ortholog FANCM, a Fanconi anemia complementation group protein, to stabilize and remodel blocked replication forks and repair damaged DNA; mhf1 srs2 double mutants are MMS hypersensitive; ortholog of human centromere constitutive-associated network (CCAN) subunit CENP-S, also known as MHF1","termid":"PBO:0082690"}


id: PBO:0047019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A22","termid":"PBO:0047019"}


id: GO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylspheroidene + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + spheroidene.","definition_xrefs":["PMID:12770713","PMID:7358679","PMID:12664193","RHEA:30903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"hydroxyneurosporene-O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.210"],"synonyms":[{"name":"1-HO-carotenoid methylase","type":"related"},{"name":"1-hydroxycarotenoid O-methylase","type":"related"},{"name":"1-hydroxycarotenoid methylase","type":"related"},{"name":"demethylspheroidene O-methyltransferase","type":"related"}],"termid":"GO:0043803"}


id: PBO:0059086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MON2 antisense RNA 1","termid":"PBO:0059086"}


id: PBO:0057735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1323","termid":"PBO:0057735"}


id: GO:0005739
data:
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id: PBO:0052550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C3","termid":"PBO:0052550"}


id: GO:0072567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 2 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 2 production","synonyms":[{"name":"CXCL2 production","type":"exact"},{"name":"MIP-2 production","type":"exact"},{"name":"MIP2 production","type":"exact"},{"name":"SCYB2 production","type":"exact"}],"termid":"GO:0072567"}


id: PBO:0029912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_sterol_level","termid":"PBO:0029912"}


id: PBO:0073441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratifin","termid":"PBO:0073441"}


id: PBO:0047315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 5","termid":"PBO:0047315"}


id: PR:O14212
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C6B12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.07c","synonyms":[{"name":"Spom972h-SPAC6B12.07c","type":"exact"}],"termid":"PR:O14212"}


id: GO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ankyrin repeat of a protein. Ankyrin repeats are tandemly repeated modules of about 33 amino acids; each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90-degree angle, and repeats stack to form an L-shaped structure.","definition_xrefs":["GOC:mah","InterPro:IPR002110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ankyrin repeat binding","synonyms":[{"name":"ANK repeat binding","type":"exact"}],"termid":"GO:0071532"}


id: GO:0043995
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84212],"is_not":false,"summary":null,"term":"GO:0043995"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 5) = CoA + histone H4 N6-acetyl-L-lysine (position 5).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016740","GO:0034212","GO:0016746"],"is_obsolete":false,"name":"histone H4K5 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase activity (H4-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K5 specific)","type":"exact"}],"termid":"GO:0043995","terms_by_termid":{"GO:0043995":null}}


id: PBO:0017861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght4","termid":"PBO:0017861"}


id: GO:1903780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rph","GO_REF:0000058","PMID:12967627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"negatively_regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac conduction","synonyms":[{"name":"down regulation of cardiac conduction","type":"exact"},{"name":"down-regulation of cardiac conduction","type":"exact"},{"name":"downregulation of cardiac conduction","type":"exact"},{"name":"inhibition of cardiac conduction","type":"narrow"}],"termid":"GO:1903780"}


id: GO:0097390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 12 (CXCL12) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 12 production","synonyms":[{"name":"CXCL12 production","type":"exact"}],"termid":"GO:0097390"}


id: PBO:0046561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 3","termid":"PBO:0046561"}


id: PBO:0083694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme that mediates the conjugation of Rub1p; a ubiquitin-like protein, to other proteins; related to E2 ubiquitin-conjugating enzymes","termid":"PBO:0083694"}


id: FYPO:0007425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion is normal (i.e. indistinguishably from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal gene conversion","synonyms":[{"name":"normal gene conversion during mitotic cell cycle","type":"related"},{"name":"normal gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0007425"}


id: GO:0042792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of ribosomal RNA (rRNA) from a mitochondrial DNA template.","definition_xrefs":["PMID:23632312","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial rRNA transcription (obsolete GO:0042792)","synonyms":[{"name":"rRNA transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:0042792"}


id: PBO:0057224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 380","termid":"PBO:0057224"}


id: GO:0010974
data:
  {"annotated_genes":["SJAG_01790","SJAG_04455","SJAG_03508","SJAG_04943","SJAG_03353","SJAG_06270","SJAG_00883","SJAG_03048","SJAG_01386","SJAG_00229","SJAG_03592","SJAG_03681","SJAG_02514","SJAG_00526","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[86437,87395,95104,100446,72472,102620,88567,89103,88488,102925,105496,111091,91245,96779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of division septum formation. division septum formation is he assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:19959363","PMID:21246752","PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of division septum assembly","termid":"GO:0032955"},{"relation_name":"is_a","term_name":"negative regulation of cell septum assembly","termid":"GO:1901892"},{"relation_name":"negatively_regulates","term_name":"division septum assembly","termid":"GO:0000917"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"negative regulation of division septum assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:1901139","GO:1902469"],"synonyms":[{"name":"inhibition of division septum assembly involved in cell cycle cytokinesis","type":"narrow"},{"name":"negative regulation of division septum formation","type":"exact"}],"termid":"GO:0010974","terms_by_termid":{"GO:0031030":null,"GO:1905757":null}}


id: PBO:0044720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 7 (pseudogene)","termid":"PBO:0044720"}


id: PBO:0003907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit (predicted)","termid":"PBO:0003907"}


id: PBO:0046929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member C","termid":"PBO:0046929"}


id: GO:0033546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate, phytate, by a pathway using inositol 1,4,5-trisphosphate produced from phosphatidylinositol 4,5-biphosphate hydrolysis by phospholipase C; in this pathway, inositol 1,4,5-trisphosphate is first converted to inositol 1,3,4-trisphosphate, and then phosphorylated further.","definition_xrefs":["GOC:mah","MetaCyc:PWY-6554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate biosynthetic process, lipid-dependent","termid":"GO:0033545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process, via inositol 1,3,4-trisphosphate","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism, via inositol 1,3,4-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis, via inositol 1,3,4-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate formation, via inositol 1,3,4-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis, via inositol 1,3,4-trisphosphate","type":"exact"},{"name":"phytate biosynthesis, via inositol 1,3,4-trisphosphate","type":"exact"},{"name":"phytate biosynthetic process, via inositol 1,3,4-trisphosphate","type":"exact"}],"termid":"GO:0033546"}


id: FYPO:0006840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which LinE complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal LinE complex assembly","synonyms":[{"name":"normal linear element protein complex assembly","type":"exact"}],"termid":"FYPO:0006840"}


id: GO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Na+(out) = K+(in) + Na+(in).","definition_xrefs":["TC:2.A.38.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"potassium:sodium symporter activity","synonyms":[{"name":"high affinity potassium transporter","type":"related"}],"termid":"GO:0009674"}


id: PR:O14329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrg17 gene.","definition_xrefs":["UniProtKB:O14329","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc transporter zrg17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.14c","synonyms":[{"name":"Spom972h-zrg17","type":"exact"}],"termid":"PR:O14329"}


id: GO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of cytomatrix proteins to form complexes in the cell cortex beneath the active zone, i.e. just beneath the presynaptic plasma membrane.","definition_xrefs":["GOC:dh","GOC:ef","GOC:jid","PMID:12812759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton organization","termid":"GO:0030865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cytoskeletal matrix organization at active zone","synonyms":[{"name":"cytoskeletal matrix organisation at active zone","type":"exact"}],"termid":"GO:0048789"}


id: PBO:0027992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027992"}


id: PBO:0071189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 30","termid":"PBO:0071189"}


id: PBO:0088846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation efflux protein family","termid":"PBO:0088846"}


id: PBO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33-2 (pseudogene)","termid":"PBO:0051154"}


id: PBO:0079915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein like","termid":"PBO:0079915"}


id: PBO:0087628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic iron-sulfur (FeS) protein assembly machinery; required for maturation of cytosolic and nuclear FeS proteins and for normal resistance to oxidative stress; deficiency results in shortened lifespan and sensitivity to paraquat; homologous to human Narf","termid":"PBO:0087628"}


id: PBO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-16","termid":"PBO:0075053"}


id: PBO:0057616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1182","termid":"PBO:0057616"}


id: MOD:00429
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["DeltaMass:0","PubMed:14570711","Unimod:36","PubMed:12964758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylated residue","synonyms":[{"name":"Dimethyl","type":"related"},{"name":"Me2Res","type":"exact"},{"name":"N,N dimethylation (of Arginine or Lysine)","type":"exact"},{"name":"di-Methylation","type":"related"}],"termid":"MOD:00429"}


id: PBO:0087091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L7B; required for processing of 27SA3 pre-rRNA to 27SB pre-rRNA during assembly of large ribosomal subunit; depletion leads to a turnover of pre-rRNA; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2); binds to Domain II of 25S and 5.8S rRNAs; homologous to mammalian ribosomal protein L7 and bacterial L30; RPL7B has a paralog, RPL7A, that arose from the whole genome duplication","termid":"PBO:0087091"}


id: PBO:0077924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 15","termid":"PBO:0077924"}


id: FYPO:0002522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is decreased. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"},{"relation_name":"is_a","term_name":"abnormal poly(A)+ mRNA export from nucleus","termid":"FYPO:0000183"},{"relation_name":"is_a","term_name":"decreased nuclear export","termid":"FYPO:0000508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"decreased polyadenylated mRNA export from nucleus","type":"exact"},{"name":"reduced poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0002522"}


id: PBO:0073620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 6","termid":"PBO:0073620"}


id: PATO:0000644
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A increased size quality inhering in an organ or tissue by virtue of the bearer's exhibiting increased number of cells.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Hyperplastic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperplastic","secondary_identifiers":["PATO:0000943"],"synonyms":[{"name":"hyperplasia","type":"exact"},{"name":"overdeveloped","type":"related"}],"termid":"PATO:0000644"}


id: PBO:0043829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF1 pseudogene 2","termid":"PBO:0043829"}


id: FYPO:0001350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton in the vegetative growth phase of the life cycle. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GO:0000226","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule cytoskeleton organization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule organisation during vegetative growth","type":"related"},{"name":"abnormal microtubule organization during vegetative growth","type":"related"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"},{"name":"microtubule cytoskeleton defects during vegetative growth","type":"exact"},{"name":"microtubule organization defects during vegetative growth","type":"related"}],"termid":"FYPO:0001350"}


id: PATO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000124 relative length (obsolete PATO:0000124)","termid":"PATO:0000124"}


id: PBO:0071876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 14","termid":"PBO:0071876"}


id: GO:0015601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["TC:3.A.1.3.10","EC:3.6.3.21"],"gene_count":0,"genotype_count":0,"name":"obsolete cystine/diaminopimelate porter activity (obsolete GO:0015601)","synonyms":[{"name":"cystine/diaminopimelate porter activity","type":"exact"}],"termid":"GO:0015601"}


id: PBO:0078044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 34","termid":"PBO:0078044"}


id: PBO:0003457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Spf31 (predicted)","termid":"PBO:0003457"}


id: FYECO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which doxorubicin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ doxorubicin","synonyms":[{"name":"+ 14-hydroxydaunomycin ","type":"related"},{"name":"+ 14-hydroxydaunorubicine ","type":"related"},{"name":"+ adriamycin","type":"related"}],"termid":"FYECO:0000308"}


id: PBO:0003673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa1 (predicted)","termid":"PBO:0003673"}


id: PBO:0050807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma up-regulated long non-coding RNA","termid":"PBO:0050807"}


id: PBO:0030134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_zinc_level","termid":"PBO:0030134"}


id: GO:0070485
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96967],"is_not":false,"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dehydro-D-arabinono-1,4-lactone, the gamma-lactone (5R)-3,4-dihydroxy-5-(hydroxymethyl)furan-2(5H)-one.","definition_xrefs":["GOC:cjk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydro-D-arabinono-1,4-lactone metabolic process","termid":"GO:0070484"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehydro-D-arabinono-1,4-lactone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dehydro-D-arabinono-1,4-lactone anabolism","type":"exact"},{"name":"dehydro-D-arabinono-1,4-lactone biosynthesis","type":"exact"},{"name":"dehydro-D-arabinono-1,4-lactone formation","type":"exact"},{"name":"dehydro-D-arabinono-1,4-lactone synthesis","type":"exact"}],"termid":"GO:0070485","terms_by_termid":{"GO:0070485":null}}


id: GO:1902926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving inulin.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:23104410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan metabolic process","termid":"GO:0010145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"inulin metabolic process","synonyms":[{"name":"inulin metabolism","type":"exact"}],"termid":"GO:1902926"}


id: GO:1990609
data:
  {"annotated_genes":["SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113281],"is_not":false,"summary":null,"term":"GO:1990609"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of glutamate-cysteine ligase.","definition_xrefs":["PMID:8103521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"glutamate-cysteine ligase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990609","terms_by_termid":{"GO:1990609":null}}


id: PBO:0050547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS5 biogenesis of lysosomal organelles complex 2 subunit 2","termid":"PBO:0050547"}


id: PBO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 3, pseudogene","termid":"PBO:0048884"}


id: GO:0035798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n-alkanal + NADP+ = alk-2-enal + NADPH + H+.","definition_xrefs":["GOC:bf","PMID:16299173","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-alkenal reductase [NAD(P)+] activity","termid":"GO:0032440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-alkenal reductase (NADP+) activity","synonyms":[{"name":"NADPH:2-alkenal alpha,beta-hydrogenase activity","type":"exact"}],"termid":"GO:0035798"}


id: PATO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001061 relative elasticity (obsolete PATO:0001061)","termid":"PATO:0001061"}


id: PBO:0040944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 15","termid":"PBO:0040944"}


id: PBO:0090477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine N5 monooxygenase","termid":"PBO:0090477"}


id: PBO:0085105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein with role in transcription, protein quality control; localizes to the intranuclear quality control compartment (INQ) in response to proteasome inhibition or DNA replication stress; INQ likely sequesters proteins involved in DNA metabolism for degradation or re-folding; also localizes to coding regions of transcribed genes; contains three WD domains (WD-40 repeat); human ortholog WDR76 also exhibits perinuclear localization under similar stress conditions","termid":"PBO:0085105"}


id: PBO:0038799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 5 (pseudogene)","termid":"PBO:0038799"}


id: GO:0034233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cell wall chitin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall chitin metabolic process","termid":"GO:0034222"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"cell wall chitin catabolic process","termid":"GO:0006039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall chitin catabolic process","synonyms":[{"name":"regulation of cell wall chitin breakdown","type":"exact"},{"name":"regulation of cell wall chitin catabolism","type":"exact"},{"name":"regulation of cell wall chitin degradation","type":"exact"}],"termid":"GO:0034233"}


id: PBO:0045009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 3","termid":"PBO:0045009"}


id: GO:0170015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with carbon dioxide to initiate a change in cell activity.","definition_xrefs":["PMID:24240097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"carbon dioxide receptor activity","termid":"GO:0170015"}


id: GO:0033591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-ascorbic acid","synonyms":[{"name":"response to L-ascorbate","type":"exact"},{"name":"response to ascorbic acid","type":"broad"},{"name":"response to vitamin C","type":"exact"}],"termid":"GO:0033591"}


id: GO:0044580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0055086","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butyryl-CoA catabolic process","synonyms":[{"name":"butyryl-CoA catabolism","type":"exact"}],"termid":"GO:0044580"}


id: GO:0008437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of thyrotropin-releasing hormone (TRH), a hormone released by the mammalian hypothalamus into the hypophyseal-portal circulation in response to neural and/or chemical stimuli. Upon receptor binding, TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0098772","GO:0005488","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"thyrotropin-releasing hormone activity","synonyms":[{"name":"TRH activity","type":"exact"},{"name":"thyrotropin releasing hormone activity","type":"exact"}],"termid":"GO:0008437"}


id: GO:0016488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol catabolic process","termid":"GO:0016095"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"farnesol metabolic process","termid":"GO:0016487"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"farnesol catabolic process","synonyms":[{"name":"farnesol breakdown","type":"exact"},{"name":"farnesol catabolism","type":"exact"},{"name":"farnesol degradation","type":"exact"}],"termid":"GO:0016488"}


id: GO:0035090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Retaining the established polarization of a cell along its apical/basal axis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell polarity","termid":"GO:0030011"},{"relation_name":"is_a","term_name":"establishment or maintenance of apical/basal cell polarity","termid":"GO:0035088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of apical/basal cell polarity","termid":"GO:0035090"}


id: FYPO:0001479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal alpha,alpha-trehalase activity","synonyms":[{"name":"abnormal neutral trehalase activity","type":"exact"},{"name":"abnormal trehalase activity","type":"broad"}],"termid":"FYPO:0001479"}


id: GO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (RS)-norcoclaurine = S-adenosyl-L-homocysteine + (RS)-coclaurine.","definition_xrefs":["EC:2.1.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"(RS)-norcoclaurine 6-O-methyltransferase activity","secondary_identifiers":["RHEA:19941","MetaCyc:2.1.1.128-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(RS)-norcoclaurine 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030786"}


id: GO:0050596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + vinorine = H2O + NADP+ + vomilenine.","definition_xrefs":["EC:1.14.14.104","RHEA:17257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vinorine hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05877","MetaCyc:1.14.13.75-RXN"],"synonyms":[{"name":"vinorine,NADPH:oxygen oxidoreductase (21alpha-hydroxylating)","type":"related"}],"termid":"GO:0050596"}


id: FYPO:0001260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to hypoxia","synonyms":[{"name":"normal RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"normal RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"normal RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"normal mRNA level during cellular response to hypoxia","type":"narrow"},{"name":"normal transcript level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001260"}


id: PBO:0086924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyrimidine nucleotidase; responsible for production of nicotinamide riboside and nicotinic acid riboside; overexpression suppresses the 6-AU sensitivity of transcription elongation factor S-II, as well as resistance to other pyrimidine derivatives; SDT1 has a paralog, PHM8, that arose from the whole genome duplication","termid":"PBO:0086924"}


id: PBO:0089101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rbm10","termid":"PBO:0089101"}


id: FYPO:0004723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is assembled in an incorrect orientation. Spindle orientation is later corrected so that the spindle is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misoriented mitotic spindle","termid":"FYPO:0007388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0001985","FYPO:0000120","FYPO:0001320"],"is_obsolete":false,"name":"transiently misoriented mitotic spindle","synonyms":[{"name":"transient abnormal mitotic spindle orientation","type":"exact"},{"name":"transient mitotic spindle misorientation","type":"exact"},{"name":"transiently misoriented mitotic spindle during vegetative growth","type":"exact"},{"name":"transiently misoriented spindle during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004723"}


id: GO:0007213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a ligand binding to an acetylcholine receptor on the surface of a target cell, and ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"acetylcholine receptor signaling pathway","termid":"GO:0095500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway","type":"exact"}],"termid":"GO:0007213"}


id: GO:1903159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any malate transmembrane transporter activity that is involved in malate import into cell.","definition_xrefs":["GO_REF:0000061","GOC:dos","GOC:TermGenie","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete malate transmembrane transporter activity involved in malate import into cell (obsolete GO:1903159)","synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity involved in malate import into cell","type":"related"},{"name":"malate transmembrane transporter activity involved in malate import into cell","type":"exact"}],"termid":"GO:1903159"}


id: PR:000050400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-75 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75, MOD:00047.","definition_xrefs":["PMID:23333317","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 phosphorylated 2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom-cut12/Phos:2","type":"exact"},{"name":"UniProtKB:O59755, Thr-75, MOD:00047","type":"narrow"}],"termid":"PR:000050400"}


id: GO:0044297
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell body","secondary_identifiers":["FMA:67301","Wikipedia:Cell_body","FBbt:00005107"],"synonyms":[{"name":"cell soma","type":"exact"}],"termid":"GO:0044297"}


id: GO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900921"],"synonyms":[{"name":"down regulation of L-glutamate import","type":"exact"},{"name":"down regulation of L-glutamate transport","type":"broad"},{"name":"down regulation of L-glutamate uptake","type":"related"},{"name":"down-regulation of L-glutamate import","type":"exact"},{"name":"down-regulation of L-glutamate transport","type":"broad"},{"name":"down-regulation of L-glutamate uptake","type":"related"},{"name":"downregulation of L-glutamate import","type":"exact"},{"name":"downregulation of L-glutamate transport","type":"broad"},{"name":"downregulation of L-glutamate uptake","type":"related"},{"name":"inhibition of L-glutamate import","type":"narrow"},{"name":"inhibition of L-glutamate transport","type":"narrow"},{"name":"inhibition of L-glutamate uptake","type":"narrow"},{"name":"negative regulation of L-glutamate import","type":"broad"},{"name":"negative regulation of L-glutamate transport","type":"broad"},{"name":"negative regulation of L-glutamate uptake","type":"related"},{"name":"regulation of L-glutamate import","type":"broad"}],"termid":"GO:0002037"}


id: PBO:0074896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 70B","termid":"PBO:0074896"}


id: PBO:0040949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 20","termid":"PBO:0040949"}


id: PR:P79071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04682","PANTHER:PTHR10715:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.18","secondary_identifiers":["UniProtKB:P79071"],"synonyms":[{"name":"Spom972h-RPL6","type":"exact"}],"termid":"PR:P79071"}


id: GO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides.","definition_xrefs":["EC:3.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.23-RXN","Reactome:R-HSA-2090079","Reactome:R-HSA-1606312","Reactome:R-HSA-1605624","Reactome:R-HSA-2265534","Reactome:R-HSA-1793217","Reactome:R-HSA-9036061","MetaCyc:BGALACT-PWY","Reactome:R-HSA-1630306","Reactome:R-HSA-9840795"],"synonyms":[{"name":"beta-D-galactanase activity","type":"related"},{"name":"beta-D-galactoside galactohydrolase activity","type":"related"},{"name":"beta-D-lactosidase activity","type":"related"},{"name":"beta-lactosidase activity","type":"related"},{"name":"exo-(1->4)-beta-D-galactanase activity","type":"related"},{"name":"hydrolact","type":"related"}],"termid":"GO:0004565"}


id: GO:0102659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 4-methylthiobutylhydroximate = H+ + 3-methylthiopropyl-desulfoglucosinolate + UDP.","definition_xrefs":["EC:2.4.1.195","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose: 4-methylthiobutylhydroximate S-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-2208"],"termid":"GO:0102659"}


id: GO:0051566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin 3-glucoside + UDP-rhamnose = anthocyanidin 3-rutinoside + UDP.","definition_xrefs":["PMID:8130800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"anthocyanidin-3-glucoside rhamnosyltransferase activity","synonyms":[{"name":"3RT activity","type":"broad"},{"name":"anthocyanidin 3-glucoside-rhamnosyltransferase activity","type":"exact"}],"termid":"GO:0051566"}


id: PBO:0079952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 5","termid":"PBO:0079952"}


id: GO:0009196
data:
  {"annotated_genes":["SJAG_04665","SJAG_02874","SJAG_00885","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91091,102642,88082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009196","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: SO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe sequence that is flanked by the FLP recombinase recognition site, FRT.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanked","termid":"SO:0000357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRT_flanked","synonyms":[{"name":"FRT flanked","type":"exact"}],"termid":"SO:0000361"}


id: GO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a mast cell in response to an external stimulus.","definition_xrefs":["PMID:12789214","PMID:11292027","GOC:add","PMID:16448392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mast cell migration","termid":"GO:0097531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell chemotaxis","termid":"GO:0002551"}


id: GO:0010749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010749"}


id: PBO:0075999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STING1 ER exit protein 1","termid":"PBO:0075999"}


id: PBO:0066377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 4","termid":"PBO:0066377"}


id: PATO:0000684
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000684 absolute incidence value (obsolete PATO:0000684)","termid":"PATO:0000684"}


id: PBO:0075550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 2","termid":"PBO:0075550"}


id: PBO:0063663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGAM family member 5, mitochondrial serine/threonine protein phosphatase pseudogene 1","termid":"PBO:0063663"}


id: PBO:0087872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional co-repressor of MBF-regulated gene expression; Nrm1p associates stably with promoters via MCB binding factor (MBF) to repress transcription upon exit from G1 phase","termid":"PBO:0087872"}


id: PBO:0038972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A2b receptor","termid":"PBO:0038972"}


id: PBO:0008485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A-type phosphatase inhibitor Sds23/Moc1","termid":"PBO:0008485"}


id: GO:1901075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GOC:TermGenie","GO:kmv","PMID:19402756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis, engulfment","termid":"GO:0060101"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic cell clearance","termid":"GO:2000426"},{"relation_name":"negatively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"negative regulation of engulfment of apoptotic cell","synonyms":[{"name":"down regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down regulation of engulfment of cell corpse","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down-regulation of engulfment of cell corpse","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"downregulation of engulfment of cell corpse","type":"exact"},{"name":"inhibition of engulfment of apoptotic cell","type":"narrow"},{"name":"inhibition of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"inhibition of engulfment of cell corpse","type":"narrow"},{"name":"negative regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"negative regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901075"}


id: PBO:0005553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin","termid":"PBO:0005553"}


id: PBO:0072400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 5","termid":"PBO:0072400"}


id: PBO:0025463
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage cardiomyopathy","termid":"PBO:0025463"}


id: PBO:0082335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein of unknown function; crystal structure resembles that of E.coli pantothenate kinase and other small kinases; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0082335"}


id: GO:0005360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + H(out)+ = glucose(in) + H(in)+, in response to a stimulus by insulin. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"insulin-responsive glucose:proton symporter activity","synonyms":[{"name":"insulin-responsive hydrogen:glucose symporter activity","type":"exact"},{"name":"insulin-responsive hydrogen:glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen/glucose transporter activity","type":"related"}],"termid":"GO:0005360"}


id: GO:1901249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung goblet cell differentiation","synonyms":[{"name":"regulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901249"}


id: PBO:0057389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548c","termid":"PBO:0057389"}


id: PBO:0038304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"db_date_version","termid":"PBO:0038304"}


id: PBO:0049478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.2 linker histone, cluster member","termid":"PBO:0049478"}


id: GO:1904263
data:
  {"annotated_genes":["SJAG_02231","SJAG_00209","SJAG_05184","SJAG_04910","SJAG_02605","SJAG_03405","SJAG_03371","SJAG_04496","SJAG_00561","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74852,75210,75900,84100,89946,91698,104607,105852,108117,113462],"is_not":false,"summary":null,"term":"GO:1904263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25366275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of TOR signaling","termid":"GO:0032008"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"positively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02605":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"activation of TORC1 signal transduction","type":"narrow"},{"name":"activation of TORC1 signaling","type":"narrow"},{"name":"positive regulation of TORC1 signal transduction","type":"exact"},{"name":"up regulation of TORC1 signal transduction","type":"exact"},{"name":"up regulation of TORC1 signaling","type":"exact"},{"name":"up-regulation of TORC1 signal transduction","type":"exact"},{"name":"up-regulation of TORC1 signaling","type":"exact"},{"name":"upregulation of TORC1 signal transduction","type":"exact"},{"name":"upregulation of TORC1 signaling","type":"exact"}],"termid":"GO:1904263","terms_by_termid":{"GO:1904263":null}}


id: GO:0003344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the pericardium is generated and organized.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"pericardium development","termid":"GO:0060039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardium morphogenesis","termid":"GO:0003344"}


id: PR:O74560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- raf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1-associated factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.07c","synonyms":[{"name":"De-localization of swi6 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-raf2","type":"exact"},{"name":"cryptic loci regulator 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74560"}


id: GO:1990970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trans-activation response (TAR) element, a hairpin RNA structure located at the 5' end of all HIV-1 transcripts, and which is required for trans-activation of a viral promoter.","definition_xrefs":["GOC:bf","GOC:PARL","Wikipedia:Trans-activation_response_element_(TAR)","PMID:25116364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA binding","termid":"GO:0070883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"trans-activation response element binding","synonyms":[{"name":"TAR binding","type":"exact"}],"termid":"GO:1990970"}


id: PBO:0031358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_benomyl","termid":"PBO:0031358"}


id: GO:0140684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri or a dimethyl-lysine residue at position 9 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:20208542","PMID:20531378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3K9 demethylase activity","termid":"GO:0032454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0032452","GO:0003824","GO:0140096","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"histone H3K9me2/H3K9me3 demethylase activity","secondary_identifiers":["RHEA:60200","EC:1.14.11.66"],"synonyms":[{"name":"histone H3-tri/dimethyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone H3K9me2 demethylase activity","type":"broad"},{"name":"histone H3K9me3 demethylase activity","type":"related"}],"termid":"GO:0140684"}


id: GO:0051907
data:
  {"annotated_genes":["SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91137],"is_not":false,"summary":null,"term":"GO:0051907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione = formaldehyde + glutathione.","definition_xrefs":["RHEA:22488","EC:4.4.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r1145","MetaCyc:RXN-2961","KEGG_REACTION:R06982"],"synonyms":[{"name":"Gfa","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase (glutathione-forming)","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase activity","type":"related"},{"name":"glutathione-dependent formaldehyde-activating enzyme activity","type":"exact"}],"termid":"GO:0051907","terms_by_termid":{"GO:0051907":null}}


id: PR:P0C016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi3 gene.","definition_xrefs":["UniProtKB:P0C016","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-40S ribosomal protein S27a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.11c","synonyms":[{"name":"Spom972h-ubi3","type":"exact"}],"termid":"PR:P0C016"}


id: GO:0098922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the dense core granule membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"dense core granule membrane","termid":"GO:0032127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"}


id: GO:0045265
data:
  {"annotated_genes":["SJAG_03925","SJAG_00133","SJAG_00836"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99101,103187,77965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000274"}]},"cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the membrane-associated Fo proteins; is thought to prevent futile rotation of the catalytic core.","definition_xrefs":["PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00836":null,"SJAG_03925":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase, stator stalk","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, stator stalk","type":"exact"}],"termid":"GO:0045265","terms_by_termid":{"GO:0000274":null}}


id: GO:0061964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["PMID:27689881","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of entry into reproductive diapause","termid":"GO:0061963"},{"relation_name":"negatively_regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of entry into reproductive diapause","termid":"GO:0061964"}


id: PBO:0083201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene RPC34/YNR003C","termid":"PBO:0083201"}


id: PBO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocyctinuria","termid":"PBO:0001097"}


id: FYPO:0007859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the nucleus divides into two or more fragments, each enclosed by nuclear envelope and containing a DNA mass, in a cell that does not form a mitotic spindle or undergo cytokinesis. In these cells, the nucleus does not elongate into a dumbbell shape, but instead the nuclear envelope takes on a ruffled aspect and then eventually pinches into two nuclear masses.","definition_xrefs":["PMID:20967237","PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"nuclear division in absence of mitotic spindle","synonyms":[{"name":"nuclear division in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"nuclear division in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"nuclear fission","type":"exact"},{"name":"nuclear fission in absence of mitotic spindle","type":"exact"},{"name":"rel syn DNA segregation in absence of mitotic spindle","type":"related"}],"termid":"FYPO:0007859"}


id: PBO:0057269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR493 cluster host gene","termid":"PBO:0057269"}


id: PATO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased rate","synonyms":[{"name":"slow rate","type":"exact"}],"termid":"PATO:0000911"}


id: GO:0015139
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92149],"is_not":false,"summary":null,"term":"GO:0015139"}]},"cv_name":"molecular_function","definition":"Enables the transfer of alpha-ketoglutarate from one side of a membrane to the other. Alpha-ketoglutarate (or oxoglutarate) is a compound with important roles in carbohydrate and amino acid metabolism, especially in transamination reactions and as a component of the TCA cycle.","definition_xrefs":["ISBN:0198547684","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"alpha-ketoglutarate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372480"],"synonyms":[{"name":"2-oxoglutarate transporter activity","type":"exact"}],"termid":"GO:0015139","terms_by_termid":{"GO:0015139":null}}


id: GO:0048014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an angiopoietin binding to the Tie receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb","GOC:signaling","PMID:11283723","PMID:11566266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Tie signaling pathway","synonyms":[{"name":"Tek receptor signaling","type":"exact"},{"name":"Tie receptor signaling pathway","type":"exact"},{"name":"Tie receptor signalling pathway","type":"exact"},{"name":"angiopoietin-Tie signaling pathway","type":"narrow"},{"name":"angiopoietin/Tie signaling pathway","type":"narrow"}],"termid":"GO:0048014"}


id: GO:1901106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetracenomycin C.","definition_xrefs":["GOC:yaf","UniPathway:UPA00174","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"tetracenomycin C metabolic process","termid":"GO:1901104"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tetracenomycin C biosynthetic process","synonyms":[{"name":"tetracenomycin C anabolism","type":"exact"},{"name":"tetracenomycin C biosynthesis","type":"exact"},{"name":"tetracenomycin C formation","type":"exact"},{"name":"tetracenomycin C synthesis","type":"exact"}],"termid":"GO:1901106"}


id: PBO:0040643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated X, apoptosis regulator","termid":"PBO:0040643"}


id: PATO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound frequency in the range of 0-20 Hz.","definition_xrefs":["studyphysics:studyphysics"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound frequency","termid":"PATO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrasonic","termid":"PATO:0001524"}


id: PBO:0030094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_bipolar_mitotic_spindle","termid":"PBO:0030094"}


id: PBO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_fasciculating_neuron_projection","termid":"PBO:0034172"}


id: PBO:0067605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 771, pseudogene","termid":"PBO:0067605"}


id: PBO:0063023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 3","termid":"PBO:0063023"}


id: PBO:0059900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 23","termid":"PBO:0059900"}


id: PBO:0075935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20-MTHFS readthrough","termid":"PBO:0075935"}


id: PATO:0001248
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark cyan","termid":"PATO:0001248"}


id: PBO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 2 (I blood group)","termid":"PBO:0048479"}


id: GO:0140677
data:
  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id: PBO:0029056
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