# terms

id: FYECO:0000117
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[114467],"is_not":false,"summary":null,"term":"FYECO:0000117"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown at a normal growth temperature. This is followed by a heat shock where the temperature is increased to a very high temperature followed by recovery at the initial temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping heat shock","termid":"FYECO:0000116"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"heat shock and recovery at normal temperature","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"heat shock for 20-30 min at 48 degrees C, preceeded and followed by growth at normal temperature","type":"narrow"}],"termid":"FYECO:0000117","terms_by_termid":{"FYECO:0000117":null}}


id: GO:0036513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions in the retrotranslocation step of ERAD (ER-associated protein degradation), and includes at its core Derlin-1 oligomers forming a retrotranslocation channel.","definition_xrefs":["PMID:16186510","GOC:PARL","GOC:bf","PMID:15215856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005789","GO:0032991","GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Derlin-1 retrotranslocation complex","synonyms":[{"name":"Derlin-1 complex","type":"exact"},{"name":"Derlin-1 protein dislocation complex","type":"exact"},{"name":"Derlin-1 retro-translocation complex","type":"exact"},{"name":"Derlin-1 retrotranslocon","type":"exact"},{"name":"ERAD protein dislocation complex","type":"exact"}],"termid":"GO:0036513"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: PBO:0041715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 6","termid":"PBO:0041715"}


id: GO:0016658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on NADH or NADPH, flavin as acceptor (obsolete GO:0016658)","synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, flavin as acceptor","type":"exact"}],"termid":"GO:0016658"}


id: SO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -50 and -10 relative to the TSS. Consensus sequence is KTYRGTATWTTT. Tends to co-occur with DMv4 (SO:0001157) . Tends to not occur with DPE motif (SO:0000015) or MTE (SO:0001162).","definition_xrefs":["PMID:12537576:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv5_motif","synonyms":[{"name":"DMv5","type":"exact"},{"name":"DMv5 motif","type":"exact"},{"name":"KTYRGTATWTTT","type":"narrow"},{"name":"directional motif v5","type":"exact"},{"name":"promoter motif 6","type":"related"}],"termid":"SO:0001159"}


id: PBO:0070716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 21","termid":"PBO:0070716"}


id: PBO:0040816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA antisense RNA 1","termid":"PBO:0040816"}


id: PBO:0063811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 3","termid":"PBO:0063811"}


id: PBO:0081163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger translocation associated","termid":"PBO:0081163"}


id: PBO:0080882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL5 pseudogene 2","termid":"PBO:0080882"}


id: GO:0033263
data:
  {"annotated_genes":["SJAG_02315","SJAG_03005","SJAG_00204","SJAG_01598","SJAG_05194","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85903,95755,95813,100069,112057,113523],"is_not":false,"summary":null,"term":"GO:0033263"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex that acts as an endosomal tethering complex (CORVET = class C core vacuole/endosome tethering) by cooperating with Rab GTPases to capture endosomal vesicles and trap them prior to the action of SNAREs; the complex is involved in endo-lysosomal biogenesis and required for transport between endosome and vacuole. The Saccharomyces cerevisiae complex contains Vps8p, Vps3p, Pep5p, Vps16p, Pep3p, and Vps33p.","definition_xrefs":["PMID:17488625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_01598":null,"SJAG_02315":null,"SJAG_03005":null,"SJAG_04966":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005768","GO:0032991","GO:0031410"],"is_obsolete":false,"name":"CORVET complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033263","terms_by_termid":{"GO:0033263":null}}


id: GO:2000748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defecation rhythm.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defecation","termid":"GO:2000294"},{"relation_name":"is_a","term_name":"regulation of defecation rhythm","termid":"GO:2000746"},{"relation_name":"positively_regulates","term_name":"defecation rhythm","termid":"GO:0035882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of defecation rhythm","synonyms":[{"name":"positive regulation of DMP","type":"exact"},{"name":"positive regulation of defecation behavior","type":"related"},{"name":"positive regulation of defecation cycle","type":"exact"},{"name":"positive regulation of defecation motor program","type":"exact"}],"termid":"GO:2000748"}


id: GO:0071712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["PMID:19520858","PMID:14607247"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-associated misfolded protein catabolic process (obsolete GO:0071712)","synonyms":[{"name":"endoplasmic reticulum-associated misfolded protein catabolism","type":"exact"}],"termid":"GO:0071712"}


id: GO:0042934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of achromobactin, a citrate siderophore, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"achromobactin transmembrane transporter activity","synonyms":[{"name":"achromobactin transporter activity","type":"related"}],"termid":"GO:0042934"}


id: PBO:0080770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked Kx blood group antigen, Kell and VPS13A binding protein","termid":"PBO:0080770"}


id: GO:0036185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Definition: Catalysis of the reaction: 15-oxolipoxin A4 + NAD(P)H + H+ = 13,14-dihydro-15-oxolipoxin A4 + NAD(P)+.","definition_xrefs":["GOC:mw","PMID:10837478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"13-lipoxin reductase activity","secondary_identifiers":["Reactome:R-HSA-2161844"],"termid":"GO:0036185"}


id: PBO:0005614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin Grx3","termid":"PBO:0005614"}


id: GO:0021708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature Lugaro cell. Differentiation includes the processes involved in commitment of a neuroblast to a Lugaro cell fate. A Lugaro cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dph","GO_REF:0000021","PMID:15157725","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Lugaro cell differentiation","termid":"GO:0021708"}


id: GO:0003701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase I transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription factor activity (obsolete GO:0003701)","synonyms":[{"name":"RNA polymerase I transcription factor activity","type":"exact"}],"termid":"GO:0003701"}


id: PBO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 17","termid":"PBO:0070276"}


id: PBO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein associated with respiratory chain (predicted)","termid":"PBO:0034813"}


id: GO:0009493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete adrenodoxin-type ferredoxin (obsolete GO:0009493)","synonyms":[{"name":"adrenodoxin-type ferredoxin","type":"exact"}],"termid":"GO:0009493"}


id: PATO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's rate of change of momentum.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"force","synonyms":[{"name":"force amplitude","type":"exact"}],"termid":"PATO:0001035"}


id: PBO:0054096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1449","termid":"PBO:0054096"}


id: PBO:0053828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1093","termid":"PBO:0053828"}


id: PBO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease II (RNB) family","termid":"PBO:0004383"}


id: GO:0008985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyruvate + ferricytochrome b1 + H2O = CO2 + acetate + ferrocytochrome b1.","definition_xrefs":["EC:1.2.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate dehydrogenase (cytochrome) activity (obsolete GO:0008985)","synonyms":[{"name":"pyruvate dehydrogenase (cytochrome) activity","type":"exact"},{"name":"pyruvate:ferricytochrome-b1 oxidoreductase activity","type":"related"},{"name":"pyruvate:ubiquinone-8-oxidoreductase activity","type":"related"},{"name":"pyruvic (cytochrome b1) dehydrogenase activity","type":"related"}],"termid":"GO:0008985"}


id: PBO:0091370
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1 Interacting Helicase","termid":"PBO:0091370"}


id: PBO:0004547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav1","termid":"PBO:0004547"}


id: FYPO:0007680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into one or both strands during mitotic DNA replication.","definition_xrefs":["PMID:33568651","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}


id: MOD:00318
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tryptophan residue by a thioether bond to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone.","definition_xrefs":["PubMed:11555656","RESID:AA0313","PubMed:11717396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-(S-L-cysteinyl)-L-tryptophyl quinone","synonyms":[{"name":"(2R)-2-amino-3-[(3-[(2S)-2-amino-2-carboxyethyl]-6,7-dioxo-6,7-dihydro-1H-indol-4-yl)sulfanyl]propanoic acid","type":"exact"},{"name":"3-(2-amino-2-carboxyethyl)-4-[2-amino-2-carboxyethyl]sulfanyl-6,7-indolinedione","type":"exact"},{"name":"4'-(L-cystein-S-yl)-L-tryptophyl quinone","type":"exact"},{"name":"4-(S-cysteinyl)tryptophan-6,7-dione","type":"exact"},{"name":"CROSSLNK 4'-cysteinyl-tryptophylquinone (Cys-Trp)","type":"exact"},{"name":"CTQ","type":"exact"},{"name":"cysteine tryptophylquinone","type":"exact"}],"termid":"MOD:00318"}


id: PBO:0086769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to transcriptional regulators from the Zn[2]-Cys[6] binuclear cluster protein family; mRNA is weakly cell cycle regulated, peaking in S phase; induced rapidly upon MMS treatment","termid":"PBO:0086769"}


id: GO:0072008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the glomerular mesangial cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesangial cell differentiation","termid":"GO:0072007"},{"relation_name":"part_of","term_name":"glomerular mesangium development","termid":"GO:0072109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular mesangial cell differentiation","termid":"GO:0072008"}


id: GO:0044868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of any molecular function being mediated by a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral process","termid":"GO:0044788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral molecular function","termid":"GO:0044868"}


id: FYECO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dethiobiotin was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited dethiobiotin","synonyms":[{"name":"limited desthiobiotin added","type":"exact"}],"termid":"FYECO:0000195"}


id: PBO:0049223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK5 intronic transcript 1","termid":"PBO:0049223"}


id: GO:0071006
data:
  {"annotated_genes":["SJAG_04117","SJAG_04898","SJAG_01504","SJAG_04783"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70930,73065,76390,76865],"is_not":false,"summary":null,"term":"GO:0071006"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.","definition_xrefs":["GOC:mah","ISBN:0879697393","PMID:18322460","GOC:ab","ISBN:0879695897","PMID:19239890","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"catalytic step 1 spliceosome","termid":"GO:0071012"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01504":null,"SJAG_04117":null,"SJAG_04783":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U2-type catalytic step 1 spliceosome","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"GT-AG catalytic step 1 spliceosome","type":"narrow"},{"name":"U2-type activated spliceosome","type":"exact"},{"name":"major catalytic step 1 spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex B*","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex B2","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071006","terms_by_termid":{"GO:0071006":null}}


id: MOD:00902
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-arginine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-arginine residue","synonyms":[{"name":"ModArg","type":"exact"}],"termid":"MOD:00902"}


id: PATO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity toward an external stimulus which is lower than normal/average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitive toward","termid":"PATO:0000516"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity toward","synonyms":[{"name":"decreased sensitivity","type":"exact"},{"name":"low sensitivity toward","type":"exact"}],"termid":"PATO:0001550"}


id: SO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates late in S phase.","definition_xrefs":["PMID:23348837","PMID:9115207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late_origin_of_replication","synonyms":[{"name":"late origin","type":"exact"},{"name":"late origin of replication","type":"exact"},{"name":"late replication origin","type":"exact"}],"termid":"SO:0002141"}


id: PBO:0036450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER delivery of tail-anchored membrane proteins (predicted)","termid":"PBO:0036450"}


id: PBO:0036083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0036083"}


id: PBO:0050266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 44","termid":"PBO:0050266"}


id: PBO:0092025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S3","termid":"PBO:0092025"}


id: PBO:0027085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_midzone_during_anaphase_A","termid":"PBO:0027085"}


id: PBO:0065044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2 pseudogene 1","termid":"PBO:0065044"}


id: PBO:0059922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 8","termid":"PBO:0059922"}


id: GO:0044022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 28) + ATP = histone H3-phosphoserine (position 28) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 28 of histone H3.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"histone H3S28 kinase activity","synonyms":[{"name":"histone kinase activity (H3-S28 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S28 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S28 specific)","type":"exact"}],"termid":"GO:0044022"}


id: PBO:0063371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1","termid":"PBO:0063371"}


id: GO:0043154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a cysteine-type endopeptidase activity involved in the apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043281"},{"relation_name":"is_a","term_name":"negative regulation of cysteine-type endopeptidase activity","termid":"GO:2000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cysteine-type endopeptidase activity involved in apoptotic process","secondary_identifiers":["GO:0001719"],"synonyms":[{"name":"down regulation of caspase activity","type":"exact"},{"name":"down-regulation of caspase activity","type":"exact"},{"name":"downregulation of caspase activity","type":"exact"},{"name":"inhibition of caspase activation","type":"narrow"},{"name":"inhibition of caspase activity","type":"narrow"},{"name":"negative regulation of caspase activation","type":"exact"},{"name":"negative regulation of caspase activity","type":"broad"}],"termid":"GO:0043154"}


id: PBO:0070175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 89 pseudogene","termid":"PBO:0070175"}


id: GO:0072177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric duct over time, from its initial formation to a mature structure. A mesonephric duct is a tube drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"},{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct development","synonyms":[{"name":"Wolffian duct development","type":"exact"}],"termid":"GO:0072177"}


id: PBO:0065105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR2B antisense RNA 1","termid":"PBO:0065105"}


id: GO:0009839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The portion of the SCF ubiquitin ligase complex that contains sites required for recognition (and recruitment) of the substrate to the complex.","definition_xrefs":["PMID:11790542","PMID:9857172"],"gene_count":0,"genotype_count":0,"name":"obsolete SCF complex substrate recognition subunit (obsolete GO:0009839)","synonyms":[{"name":"SCF complex substrate recognition subunit","type":"exact"}],"termid":"GO:0009839"}


id: PBO:0082984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoskeletal protein binding protein; required for assembly of the cortical actin cytoskeleton; interacts with proteins regulating actin dynamics and proteins required for endocytosis; found in the nucleus and cell cortex; has 3 SH3 domains","termid":"PBO:0082984"}


id: GO:0010179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetyl-alanine + H2O = indole-3-acetate + L-alanine.","definition_xrefs":["MetaCyc:RXN-2981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IAA-amino acid conjugate hydrolase activity","termid":"GO:0010178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"IAA-Ala conjugate hydrolase activity","termid":"GO:0010179"}


id: PBO:0032707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_error-prone_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032707"}


id: PBO:0054693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2102","termid":"PBO:0054693"}


id: PR:P31406
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase catalytic subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00670","PANTHER:PTHR15184:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase catalytic subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.05","secondary_identifiers":["UniProtKB:P31406"],"synonyms":[{"name":"Spom972h-ATP6V1A","type":"exact"},{"name":"V-ATPase 67 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31406"}


id: PBO:0085680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in prospore membrane morphogenesis; peripheral membrane protein that localizes to the prospore membrane and at numerous membrane contact sites; involved in sporulation, vacuolar protein sorting, prospore membrane formation during sporulation, and protein-Golgi retention; required for mitochondrial integrity; contains a PH-like domain; homologous to human CHAC and COH1 which are involved in Chorea-acanthocytosis and Cohen syndrome, respectively","termid":"PBO:0085680"}


id: FYPO:0006281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased in centromeric regions.","definition_xrefs":["PomBase:mah","PMID:28977643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic recombination at centromere","termid":"FYPO:0006281"}


id: GO:0032247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a purine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleoside transport","termid":"GO:0032243"},{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleoside transport","synonyms":[{"name":"down regulation of purine nucleoside transport","type":"exact"},{"name":"down-regulation of purine nucleoside transport","type":"exact"},{"name":"downregulation of purine nucleoside transport","type":"exact"},{"name":"inhibition of purine nucleoside transport","type":"narrow"}],"termid":"GO:0032247"}


id: FYECO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mevalonate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mevalonate","termid":"FYECO:0000269"}


id: PBO:0078259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable B (pseudogene)","termid":"PBO:0078259"}


id: PBO:0065970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 paralog D","termid":"PBO:0065970"}


id: GO:0009737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to abscisic acid","synonyms":[{"name":"response to abscisic acid stimulus","type":"exact"}],"termid":"GO:0009737"}


id: GO:0044565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a dendritic cell population by cell division. A dendritic cell is a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["PMID:18469816","CL:0000451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell proliferation","termid":"GO:0044565"}


id: PBO:0005518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Par1","termid":"PBO:0005518"}


id: PBO:0060812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear paraspeckle assembly transcript 1","termid":"PBO:0060812"}


id: PBO:0083047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyuridine triphosphate diphosphatase (dUTPase); catalyzes hydrolysis of dUTP to dUMP and PPi, thereby preventing incorporation of uracil into DNA during replication; critical for the maintenance of genetic stability; also has diphosphatase activity on deoxyinosine triphosphate; human homolog DUT allows growth of yeast haploid dut1 null mutant after sporulation of heterozygous diploid","termid":"PBO:0083047"}


id: PBO:0080663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 9","termid":"PBO:0080663"}


id: MOD:00528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:00528"}


id: CHEBI:46442
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanadate(3-)","termid":"CHEBI:46442"}


id: GO:0032298
data:
  {"annotated_genes":["SJAG_03720","SJAG_00364","SJAG_03438","SJAG_03160","SJAG_03695","SJAG_02074","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98768,107316,112421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[97850,111426,102019,84818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of initiation of DNA-dependent DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication initiation","termid":"GO:0030174"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"DNA replication initiation","termid":"GO:0006270"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA-templated DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication initiation","type":"narrow"},{"name":"negative regulation of DNA replication initiation","type":"broad"},{"name":"positive regulation of DNA-dependent DNA replication initiation","type":"exact"},{"name":"stimulation of DNA replication initiation","type":"narrow"},{"name":"up regulation of DNA replication initiation","type":"exact"},{"name":"up-regulation of DNA replication initiation","type":"exact"},{"name":"upregulation of DNA replication initiation","type":"exact"}],"termid":"GO:0032298","terms_by_termid":{"GO:1903468":null,"GO:1904514":null}}


id: PBO:0078924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-3","termid":"PBO:0078924"}


id: PR:O13606
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific transcription factor mei4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.11","synonyms":[{"name":"Spom972h-mei4","type":"exact"}],"termid":"PR:O13606"}


id: GO:2000546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904849"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000544"},{"relation_name":"is_a","term_name":"positive regulation of endothelial cell chemotaxis","termid":"GO:2001028"},{"relation_name":"positively_regulates","term_name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000546"}


id: PBO:0041713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 4","termid":"PBO:0041713"}


id: FYPO:0005663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle is abnormal after arrest resulting from heat shock.","definition_xrefs":["PomBase:mah","PMID:19546237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to heat","termid":"FYPO:0000212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal re-entry into mitotic cell cycle after arrest in response to heat shock","synonyms":[{"name":"abnormal re-entry into mitotic cell cycle after arrest in response to heat shock during vegetative growth","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after heat shock arrest","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after heat shock-induced arrest","type":"exact"}],"termid":"FYPO:0005663"}


id: PR:Q9US24
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like protein ATG12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00908","PANTHER:PTHR13385:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein ATG12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.06c","secondary_identifiers":["UniProtKB:Q9US24"],"synonyms":[{"name":"Spom972h-ATG12","type":"exact"},{"name":"autophagy-related protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US24"}


id: FYPO:0001897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"P-bodies present in decreased numbers","termid":"FYPO:0001898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"P-bodies present in decreased numbers during vegetative growth","synonyms":[{"name":"P bodies present in decreased numbers during vegetative growth","type":"exact"},{"name":"P-bodies present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"P-bodies present in reduced numbers during vegetative growth","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers during vegetative growth","type":"exact"},{"name":"decreased P-body formation during vegetative growth","type":"related"},{"name":"decreased P-body number during vegetative growth","type":"exact"},{"name":"decreased number of P-bodies present during vegetative growth","type":"related"},{"name":"fewer P-bodies present during vegetative growth","type":"exact"}],"termid":"FYPO:0001897"}


id: GO:0017057
data:
  {"annotated_genes":["SJAG_01824","SJAG_02647"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72707,78657],"is_not":false,"summary":null,"term":"GO:0017057"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-O-phosphono-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate + H+.","definition_xrefs":["EC:3.1.1.31","RHEA:12556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01824":null,"SJAG_02647":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-phosphogluconolactonase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-71296","KEGG_REACTION:R02035","MetaCyc:6PGLUCONOLACT-RXN"],"synonyms":[{"name":"6-PGL","type":"related"},{"name":"6-phospho-D-glucono-1,5-lactone lactonohydrolase activity","type":"related"},{"name":"phosphogluconolactonase activity","type":"related"}],"termid":"GO:0017057","terms_by_termid":{"GO:0017057":null}}


id: PBO:0060475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOG neighbor homeobox","termid":"PBO:0060475"}


id: PBO:0077268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM9 domain family member B","termid":"PBO:0077268"}


id: PBO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein Hob1","termid":"PBO:0004051"}


id: GO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oleic acid","termid":"GO:0034201"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oleic acid","synonyms":[{"name":"cellular response to oleate","type":"exact"}],"termid":"GO:0071400"}


id: PR:000050562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-52 of the amino acid sequence represented by UniProtKB:P56286. UniProtKB:P56286, Ser-52, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:28771613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe)","termid":"PR:000050560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tif211/Phos:(S52)","pombase_gene_id":"SPAC3G9.09c","synonyms":[{"name":"Spom-EIF2S1/Phos:1","type":"exact"},{"name":"UniProtKB:P56286, Ser-52, MOD:00046","type":"exact"},{"name":"UniProtKB:P56286-1, Ser-52, MOD:00046","type":"narrow"},{"name":"tif211/Phos:(S52)","type":"exact"}],"termid":"PR:000050562"}


id: PBO:0011484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc1","termid":"PBO:0011484"}


id: PBO:0028990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_splicing_at_cryptic_splice_sites","termid":"PBO:0028990"}


id: PBO:0060267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 1","termid":"PBO:0060267"}


id: PATO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of extent of the receptiveness of a female to male advances.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptivity","termid":"PATO:0001719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female receptivity","termid":"PATO:0001720"}


id: GO:1903843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite ion stimulus.","definition_xrefs":["GOC:mr","GO_REF:0000071","PMID:12106899","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to arsenic-containing substance","termid":"GO:0071243"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to arsenite ion","termid":"GO:1903842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to arsenite ion","termid":"GO:1903843"}


id: GO:2000478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric glomerular visceral epithelial cell development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of metanephric podocyte development","termid":"GO:2000477"},{"relation_name":"positively_regulates","term_name":"metanephric podocyte development","termid":"GO:0072249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric podocyte development","synonyms":[{"name":"positive regulation of metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:2000478"}


id: MOD:00054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-acetyl-L-glutamine.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-L-glutamine","synonyms":[{"name":"(2S)-2-acetamido-5-pentanediamic acid","type":"exact"},{"name":"2-acetylamino-5-amino-5-oxopentanoic acid","type":"exact"},{"name":"2-acetylamino-5-pentanediamic acid","type":"exact"},{"name":"2-acetylazanyl-5-azanyl-5-oxopentanoic acid","type":"exact"},{"name":"AcGln","type":"exact"},{"name":"N-acetyl-L-glutamine","type":"exact"},{"name":"N-acetylated L-glutamine","type":"exact"},{"name":"acetylglutamine","type":"exact"}],"termid":"MOD:00054"}


id: FYPO:0008108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which mitochondrial is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal mitochondrial distribution","termid":"FYPO:0007912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial inheritance","termid":"FYPO:0008108"}


id: PBO:0089905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein Slm1","termid":"PBO:0089905"}


id: PBO:0034624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nuclear_envelope_during_vegetative_growth","termid":"PBO:0034624"}


id: PR:G2TRU8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf17 gene.","definition_xrefs":["UniProtKB:G2TRU8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.06c","synonyms":[{"name":"Spom972h-wtf17","type":"exact"}],"termid":"PR:G2TRU8"}


id: PBO:0060275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 9","termid":"PBO:0060275"}


id: GO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-lactate + GTP = 2-phospho-(S)-lactate + GDP.","definition_xrefs":["PMID:11535063"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-lactate 2-kinase activity (obsolete GO:0043841)","synonyms":[{"name":"lactate 2-kinase activity","type":"exact"}],"termid":"GO:0043841"}


id: PBO:0076817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense RNA 1","termid":"PBO:0076817"}


id: GO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription by galactose","termid":"GO:0000410"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by galactose","termid":"GO:0000431"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription from RNA polymerase II promoter","termid":"GO:0000437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"carbon catabolite repression of transcription from RNA polymerase II promoter by galactose","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter by galactose","type":"narrow"}],"termid":"GO:0000434"}


id: GO:0051796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle maturation","termid":"GO:0048817"},{"relation_name":"is_a","term_name":"regulation of timing of catagen","termid":"GO:0051794"},{"relation_name":"negatively_regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of timing of catagen","synonyms":[{"name":"down regulation of catagen","type":"related"},{"name":"down-regulation of catagen","type":"related"},{"name":"downregulation of catagen","type":"related"},{"name":"inhibition of catagen","type":"narrow"},{"name":"negative regulation of catagen","type":"related"}],"termid":"GO:0051796"}


id: GO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immune response","termid":"GO:0045088"}


id: SO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cDNA_match","synonyms":[{"name":"cDNA match","type":"exact"}],"termid":"SO:0000689"}


id: GO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mesonephric comma-shaped body is generated and organized. The mesonephric comma-shaped body is the precursor structure to the mesonephric S-shaped body that contributes to the morphogenesis of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"comma-shaped body morphogenesis","termid":"GO:0072049"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric comma-shaped body morphogenesis","termid":"GO:0061236"}


id: GO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of lactone rings (intramolecular cyclic esters) to produce a hydroxyl group and a carboxyl group.","definition_xrefs":["PMID:11640988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"lactonohydrolase activity","termid":"GO:0046573"}


id: GO:0030321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chloride ions from one side of an epithelium to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transport","termid":"GO:0006821"},{"relation_name":"is_a","term_name":"transepithelial transport","termid":"GO:0070633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transepithelial chloride transport","termid":"GO:0030321"}


id: GO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"}


id: GO:0140221
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Host-derived membrane of a pathogen-containing vacuole.","definition_xrefs":["PMID:26842840","PMID:10560000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"pathogen-containing vacuole","termid":"GO:0140220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole membrane","synonyms":[{"name":"pathogen inclusion membrane","type":"related"},{"name":"pathogen-containing compartment membrane","type":"exact"}],"termid":"GO:0140221"}


id: PBO:0003436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk27 (predicted)","termid":"PBO:0003436"}


id: GO:0140311
data:
  {"annotated_genes":["SJAG_00642","SJAG_00436","SJAG_04873","SJAG_00145","SJAG_00822","SJAG_02857","SJAG_02576","SJAG_02266","SJAG_02474"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83439,85945,90767,90828,95989,96039,100408,102799,106999],"is_not":false,"summary":null,"term":"GO:0140311"}]},"cv_name":"molecular_function","definition":"Binding to a protein to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:1493333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00436":null,"SJAG_00642":null,"SJAG_00822":null,"SJAG_02266":null,"SJAG_02474":null,"SJAG_02576":null,"SJAG_02857":null,"SJAG_04873":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"protein sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140311","terms_by_termid":{"GO:0140311":null}}


id: PBO:0005541
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of lithium","termid":"PBO:0005541"}


id: GO:0003424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization that results in the directional division of a growth plate cartilage chondrocyte.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte division","termid":"GO:0003423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity involved in growth plate cartilage chondrocyte division","synonyms":[{"name":"growth plate cartilage chondrocyte polarization","type":"related"}],"termid":"GO:0003424"}


id: PBO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR46","termid":"PBO:0005607"}


id: FYPO:0003505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutathione gamma-glutamylcysteinyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutathione gamma-glutamylcysteinyltransferase activity","termid":"FYPO:0000754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished glutathione gamma-glutamylcysteinyltransferase activity","synonyms":[{"name":"glutathione gamma-glutamylcysteinyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003505"}


id: PBO:0071702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 like","termid":"PBO:0071702"}


id: PBO:0061615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 1","termid":"PBO:0061615"}


id: PBO:0040676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR1 pseudogene 1","termid":"PBO:0040676"}


id: GO:1905811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of excitatory synapse pruning.","definition_xrefs":["GO_REF:0000058","PMID:27779093","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse pruning","termid":"GO:1905807"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse pruning","termid":"GO:1905810"},{"relation_name":"negatively_regulates","term_name":"excitatory synapse pruning","termid":"GO:1905805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of excitatory synapse pruning","synonyms":[{"name":"down regulation of excitatory synapse disassembly","type":"exact"},{"name":"down-regulation of excitatory synapse disassembly","type":"exact"},{"name":"downregulation of excitatory synapse disassembly","type":"exact"},{"name":"inhibition of excitatory synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905811"}


id: PBO:0050831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia up-regulated 1","termid":"PBO:0050831"}


id: PR:Q9UT18
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi9 gene.","definition_xrefs":["UniProtKB:Q9UT18","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transporter thi9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.10","synonyms":[{"name":"Spom972h-thi9","type":"exact"}],"termid":"PR:Q9UT18"}


id: PR:Q9P7X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20856:SF5","PRO:DNx","OMA:SCHPO03090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.07","secondary_identifiers":["UniProtKB:Q9P7X8"],"synonyms":[{"name":"DNA-directed RNA polymerase I polypeptide 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1B","type":"exact"}],"termid":"PR:Q9P7X8"}


id: PBO:0030538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_glucose_starvation","termid":"PBO:0030538"}


id: PBO:0031054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_spindle_microtubules_to_kinetochore","termid":"PBO:0031054"}


id: PBO:0071973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 1","termid":"PBO:0071973"}


id: GO:0048755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches in a nerve are generated and organized. This term refers to an anatomical structure (nerve) not a cell (neuron).","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching morphogenesis of a nerve","termid":"GO:0048755"}


id: PBO:0038579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1","termid":"PBO:0038579"}


id: PBO:0085181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three alternate beta subunits of the Snf1 kinase complex; involved in the response to glucose starvation; null mutants exhibit accelerated aging; N-myristoylprotein localized to the cytoplasm and the plasma membrane; SIP2 has a paralog, GAL83, that arose from the whole genome duplication","termid":"PBO:0085181"}


id: PBO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 30","termid":"PBO:0080044"}


id: GO:0052384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of reactive oxygen species produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced reactive oxygen species (obsolete GO:0052384)","synonyms":[{"name":"evasion by organism of cellular damage caused by symbiont oxidative burst","type":"narrow"},{"name":"evasion or tolerance by organism of reactive oxygen species produced during symbiont defense response","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced reactive oxygen species","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont metabolic burst","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont oxidative burst","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont respiratory burst","type":"exact"},{"name":"evasion or tolerance of reactive oxygen species produced by symbiont in response to organism","type":"exact"},{"name":"evasion or tolerance of symbiont-produced AOS","type":"exact"},{"name":"evasion or tolerance of symbiont-produced ROIs","type":"exact"},{"name":"evasion or tolerance of symbiont-produced ROS","type":"exact"},{"name":"evasion or tolerance of symbiont-produced active oxygen species","type":"exact"},{"name":"evasion or tolerance of symbiont-produced reactive oxygen intermediates","type":"exact"}],"termid":"GO:0052384"}


id: PBO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XIX alpha 1 chain","termid":"PBO:0043589"}


id: SO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base region at the 3' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:splice_acceptor_variant","type":"exact"},{"name":"Seattleseq:splice-acceptor","type":"exact"},{"name":"VAAST:splice_acceptor_variant","type":"exact"},{"name":"VEP:splice_acceptor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_ACCEPTOR","type":"exact"},{"name":"splice acceptor variant","type":"exact"}],"termid":"SO:0001574"}


id: PBO:0085654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial function; interacts with Hsp82p and copurifies with Ipl1p; expression is copper responsive and downregulated in strains deleted for MAC1, a copper-responsive transcription factor; human homolog MYG1 complements yeast null mutant","termid":"PBO:0085654"}


id: FYPO:0004061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal during G1 phase of the mitotic cell cycle. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased UV-damage excision repair","termid":"FYPO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"decreased UV-damage excision repair during mitotic G1 phase","synonyms":[{"name":"decreased UV-damage excision repair during G1 phase of mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during mitotic G1 during vegetative growth","type":"exact"},{"name":"reduced UV-damage excision repair during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004061"}


id: PBO:0044729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 12B, pseudogene","termid":"PBO:0044729"}


id: PBO:0049396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2 and S-phase expressed 1","termid":"PBO:0049396"}


id: PBO:0058108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4323","termid":"PBO:0058108"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: GO:1905488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16516839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of anterior/posterior axon guidance","termid":"GO:1905486"},{"relation_name":"positively_regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior/posterior axon guidance","synonyms":[{"name":"activation of anterior-posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon pathfinding","type":"narrow"},{"name":"positive regulation of anterior-posterior axon guidance","type":"exact"},{"name":"positive regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up-regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"upregulation of anterior-posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905488"}


id: PBO:0066974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 277","termid":"PBO:0066974"}


id: GO:0080191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of tissue from a secondary thickening meristem.","definition_xrefs":["JSTOR:4354165","PO:0025004","PO:0025414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral growth","termid":"GO:0080190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary thickening","termid":"GO:0080191"}


id: PBO:0046891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 13 member B","termid":"PBO:0046891"}


id: FYPO:0006038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which the initiation of translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translational initiation is he process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm.","definition_xrefs":["GO:0002183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cytoplasmic translational initiation","synonyms":[{"name":"normal cytoplasmic translation initiation","type":"exact"},{"name":"normal cytoplasmic translational initiation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translational initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006038"}


id: PBO:0080860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 1","termid":"PBO:0080860"}


id: PBO:0089292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a","termid":"PBO:0089292"}


id: FYPO:0000329
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[114585,114589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[114640],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[114579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein modification is abnormal. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein modification during vegetative growth","references_by_uniquename":{"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_04551","SJAG_01787","SJAG_00610"],"single_locus_genotype_uniquenames":["pck2delta","pck1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","gms1delta"],"synonyms":[{"name":"abnormal protein modification during mitotic cell cycle","type":"related"},{"name":"abnormal protein/peptide modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000329","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PR:Q10212
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MEMO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01586","PANTHER:PTHR11060:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 family protein C4H3.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.04c","secondary_identifiers":["UniProtKB:Q10212"],"synonyms":[{"name":"Spom972h-MEMO1","type":"exact"}],"termid":"PR:Q10212"}


id: GO:0018195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-arginine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine modification","termid":"GO:0018195"}


id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: GO:0010555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannitol stimulus.","definition_xrefs":["PMID:17999646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mannitol","synonyms":[{"name":"response to mannitol stimulus","type":"exact"}],"termid":"GO:0010555"}


id: GO:1901627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane organization","termid":"GO:1901626"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of postsynaptic membrane organization","synonyms":[{"name":"down regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down regulation of postsynaptic membrane organization","type":"exact"},{"name":"down-regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down-regulation of postsynaptic membrane organization","type":"exact"},{"name":"downregulation of postsynaptic membrane organisation","type":"exact"},{"name":"downregulation of postsynaptic membrane organization","type":"exact"},{"name":"inhibition of postsynaptic membrane organisation","type":"narrow"},{"name":"inhibition of postsynaptic membrane organization","type":"narrow"},{"name":"negative regulation of post-synaptic membrane organization","type":"exact"},{"name":"negative regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901627"}


id: FYPO:0004742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin silencing at centromere outer repeat","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"normal chromatin silencing at centromere otr","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin silencing at pericentric region","type":"related"},{"name":"normal chromatin silencing at pericentromeric region","type":"related"},{"name":"normal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0004742"}


id: PBO:0029196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029196"}


id: PBO:0068090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 396","termid":"PBO:0068090"}


id: FYPO:0003887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which endocytosis does not occur during a meiotic cell cycle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished endocytosis during meiotic cell cycle","synonyms":[{"name":"abolished actin-mediated endocytosis during meiotic cell cycle","type":"exact"},{"name":"abolished protein internalization during meiotic cell cycle","type":"narrow"},{"name":"absent endocytosis during meiotic cell cycle","type":"exact"},{"name":"endocytosis abolished during meiotic cell cycle","type":"exact"},{"name":"endocytosis: absent during meiotic cell cycle","type":"related"}],"termid":"FYPO:0003887"}


id: GO:0141006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism in which a piRNA triggers heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32381626","PMID:32674113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA-mediated heterochromatin formation","termid":"GO:0140966"},{"relation_name":"is_a","term_name":"retrotransposon silencing by heterochromatin formation","termid":"GO:0141005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"piRNA-mediated retrotransposon silencing by heterochromatin formation","termid":"GO:0141006"}


id: PBO:0049848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme binding protein 1","termid":"PBO:0049848"}


id: GO:0034496
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73968],"is_not":false,"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the membranes of multivesicular bodies.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"},{"relation_name":"part_of","term_name":"multivesicular body organization","termid":"GO:0036257"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"multivesicular body membrane disassembly","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"MVB membrane disassembly","type":"exact"}],"termid":"GO:0034496","terms_by_termid":{"GO:0034496":null}}


id: GO:0002830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type 2 immune response","synonyms":[{"name":"activation of type 2 immune response","type":"narrow"},{"name":"positive regulation of T-helper 2 type immune response","type":"narrow"},{"name":"positive regulation of Th2 immune response","type":"narrow"},{"name":"stimulation of type 2 immune response","type":"narrow"},{"name":"up regulation of type 2 immune response","type":"exact"},{"name":"up-regulation of type 2 immune response","type":"exact"},{"name":"upregulation of type 2 immune response","type":"exact"}],"termid":"GO:0002830"}


id: SO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_number_variation","termid":"SO:1000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Aneuploid"],"termid":"SO:0000054"}


id: PBO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHHADH antisense RNA 1","termid":"PBO:0045982"}


id: PBO:0068745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 2, pseudogene","termid":"PBO:0068745"}


id: PBO:0043457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin and CBS domain divalent metal cation transport mediator 3","termid":"PBO:0043457"}


id: PR:Q9Y7J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.07 gene.","definition_xrefs":["UniProtKB:Q9Y7J3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine N-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.07","synonyms":[{"name":"Spom972h-SPBC1778.07","type":"exact"}],"termid":"PR:Q9Y7J3"}


id: PBO:0078428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 5-1","termid":"PBO:0078428"}


id: MOD:00197
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamine residue and a glycine residue to form 2-imino-glutamine 5-imidazolinone glycine.","definition_xrefs":["PubMed:11050230","PubMed:11209050","RESID:AA0189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-imino-glutamine 5-imidazolinone glycine","synonyms":[{"name":"2,N-didehydroglutaminyl-5-imidazolinone glycine","type":"exact"},{"name":"2-(3-carbamoyl-1-imino-propyl)-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-imino-glutamine 5-imidazolinone glycine","type":"exact"},{"name":"CROSSLNK 2-iminomethyl-5-imidazolinone (Gln-Gly)","type":"exact"},{"name":"[2-(3-carbamoyl-1-imino-propyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"[2-(4-amino-4-oxobutanimidoyl)-5-oxo-4,5-dihydro-1H-imidazol-1-yl]acetic acid","type":"exact"},{"name":"fluorescent protein FP583 chromophore","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"red fluorescent protein chromophore","type":"exact"}],"termid":"MOD:00197"}


id: PBO:0053545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 551","termid":"PBO:0053545"}


id: PBO:0050937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 7","termid":"PBO:0050937"}


id: PBO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methylase subunit Trm72 (predicted)","termid":"PBO:0013480"}


id: GO:0047773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-carnitinamide + H2O = (R)-carnitine + NH4.","definition_xrefs":["RHEA:17537","EC:3.5.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carnitinamidase activity","secondary_identifiers":["MetaCyc:CARNITINAMIDASE-RXN","KEGG_REACTION:R01922"],"synonyms":[{"name":"L-carnitinamidase activity","type":"related"},{"name":"L-carnitinamide amidohydrolase activity","type":"related"},{"name":"L-carnitine amidase activity","type":"related"},{"name":"carnitine amidase activity","type":"related"}],"termid":"GO:0047773"}


id: PBO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_during_vegetative_growth","termid":"PBO:0030160"}


id: PBO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.23","termid":"PBO:0002105"}


id: PBO:0030019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_thin,_elongated_vegetative_cell","termid":"PBO:0030019"}


id: GO:0070336
data:
  {"annotated_genes":["SJAG_01076","SJAG_04671","SJAG_04752","SJAG_03994","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74821,77256,107795,111985],"is_not":false,"summary":null,"term":"GO:0070336"},{"annotations":[94897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a flap structure in DNA. A DNA flap structure is one in which a single-stranded length of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:15189154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_03780":null,"SJAG_03994":null,"SJAG_04671":null,"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0070336","terms_by_termid":{"GO:0070336":null,"GO:0070337":null}}


id: GO:0090366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:dph","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA modification","termid":"GO:0090365"},{"relation_name":"is_a","term_name":"positive regulation of mRNA metabolic process","termid":"GO:1903313"},{"relation_name":"positively_regulates","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA modification","termid":"GO:0090366"}


id: PBO:0049668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan binding protein 4","termid":"PBO:0049668"}


id: PBO:0087408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-specific adaptor protein involved in apo-Rli1p maturation; subunit of the Yae1-Lto1 complex, recruiting apo-Rli1p to the CIA targeting complex, facilitating the insertion of an Fe/S cluster by the Fe-S biosynthetic machinery; deca-GX3 motif crucial for complex formation; essential for aerobic but not anaerobic growth; homolog of human ORAOV1, which is overexpressed in solid tumors; co-expression of ORAOV1 and YAE1 homolog YAE1D1 restores growth and Rli1p maturation after LTO1 depletion","termid":"PBO:0087408"}


id: PBO:0085096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear polyadenylated RNA-binding protein; required for export of poly(A)+ mRNA from the nucleus; proposed to couple mRNA export with 3' end processing via its interactions with Mex67p and Pcf11p; interacts with DBP2; inhibits the helicase activity of Dbp2; functionally redundant with Yra2p, another REF family member","termid":"PBO:0085096"}


id: GO:1901435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of toluene catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"regulation of toluene catabolic process","termid":"GO:1901434"},{"relation_name":"is_a","term_name":"negative regulation of toluene metabolic process","termid":"GO:1901438"},{"relation_name":"negatively_regulates","term_name":"toluene catabolic process","termid":"GO:0042203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toluene catabolic process","synonyms":[{"name":"down regulation of toluene breakdown","type":"exact"},{"name":"down regulation of toluene catabolic process","type":"exact"},{"name":"down regulation of toluene catabolism","type":"exact"},{"name":"down regulation of toluene degradation","type":"exact"},{"name":"down-regulation of toluene breakdown","type":"exact"},{"name":"down-regulation of toluene catabolic process","type":"exact"},{"name":"down-regulation of toluene catabolism","type":"exact"},{"name":"down-regulation of toluene degradation","type":"exact"},{"name":"downregulation of toluene breakdown","type":"exact"},{"name":"downregulation of toluene catabolic process","type":"exact"},{"name":"downregulation of toluene catabolism","type":"exact"},{"name":"downregulation of toluene degradation","type":"exact"},{"name":"inhibition of toluene breakdown","type":"exact"},{"name":"inhibition of toluene catabolic process","type":"narrow"},{"name":"inhibition of toluene catabolism","type":"exact"},{"name":"inhibition of toluene degradation","type":"exact"},{"name":"negative regulation of toluene breakdown","type":"exact"},{"name":"negative regulation of toluene catabolism","type":"exact"},{"name":"negative regulation of toluene degradation","type":"exact"}],"termid":"GO:1901435"}


id: PBO:0045189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 2","termid":"PBO:0045189"}


id: PBO:0085063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec66p","termid":"PBO:0085063"}


id: FYPO:0005309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K5 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K5 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005309"}


id: PBO:0028260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubules_present_in_decreased_numbers","termid":"PBO:0028260"}


id: PBO:0045901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen-induced osteoclastogenesis regulator 1","termid":"PBO:0045901"}


id: PBO:0085036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of the NatB N-terminal acetyltransferase; NatB catalyzes N-acetylation of proteins with specific N-terminal sequences; involved in mitochondrial inheritance and actin assembly","termid":"PBO:0085036"}


id: GO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:mb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell population proliferation","synonyms":[{"name":"cell proliferation","type":"related"}],"termid":"GO:0008283"}


id: GO:2000465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glycogen (starch) synthase activity","synonyms":[{"name":"regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000465"}


id: GO:0019769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"low-affinity IgE receptor activity","synonyms":[{"name":"low affinity Fc receptor activity","type":"related"},{"name":"low affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019769"}


id: GO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a DDT stimulus. DDT, dichlorodiphenyltrichloroethane, is a chlorinated hydrocarbon pesticide moderately toxic to humans and other animals.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DDT","synonyms":[{"name":"DDT resistance","type":"related"},{"name":"DDT susceptibility/resistance","type":"related"}],"termid":"GO:0046680"}


id: GO:2000499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000499)","synonyms":[{"name":"negative regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"negative regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000499"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: PBO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID domain","termid":"PBO:0001189"}


id: PBO:0004695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Ssn6","termid":"PBO:0004695"}


id: PBO:0055966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and coiled-coil centrosomal protein 1","termid":"PBO:0055966"}


id: PBO:0030914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_chemical_stimulus_during_vegetative_growth","termid":"PBO:0030914"}


id: PBO:0073057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1","termid":"PBO:0073057"}


id: PBO:0039616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 pseudogene 3","termid":"PBO:0039616"}


id: PBO:0040187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase 1","termid":"PBO:0040187"}


id: PBO:0084825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for assembly of cytochrome bc1 complex; interacts with the Cbp3p-Cbp6p complex and newly synthesized cytochrome b (Cobp) to promote assembly of Cobp into the cytochrome bc1 complex","termid":"PBO:0084825"}


id: GO:0071846
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74040],"is_not":false,"summary":null,"term":"GO:0071846"}]},"cv_name":"biological_process","definition":"An actin filament severing process that results in the removal of actin filament branches specifically at the branch points.","definition_xrefs":["GOC:jh","GOC:mah","PMID:20362448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament debranching","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0071846","terms_by_termid":{"GO:0071846":null}}


id: FYPO:0007345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from euchromatic regions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:18957202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased euchromatin-derived RNA level","synonyms":[{"name":"increased accumulation of euchromatin-derived RNAs","type":"related"},{"name":"increased euchromatin-derived RNA accumulation","type":"related"},{"name":"increased euchromatin-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased euchromatin-derived RNA level during vegetative growth","type":"exact"},{"name":"increased euchromatin-derived transcript level","type":"exact"},{"name":"increased level of RNA transcribed from euchromatin","type":"exact"}],"termid":"FYPO:0007345"}


id: PBO:0027054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_microtubules","termid":"PBO:0027054"}


id: GO:1901832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of all-trans-neoxanthin.","definition_xrefs":["MetaCyc:PWY-6809","GOC:yaf","PMID:11029576","GOC:TermGenie","UniPathway:UPA00388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"all-trans-neoxanthin metabolic process","termid":"GO:1901831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"all-trans-neoxanthin catabolic process","synonyms":[{"name":"all-trans-neoxanthin breakdown","type":"exact"},{"name":"all-trans-neoxanthin catabolism","type":"exact"},{"name":"all-trans-neoxanthin degradation","type":"exact"},{"name":"neoxanthin breakdown","type":"exact"},{"name":"neoxanthin catabolic process","type":"exact"},{"name":"neoxanthin catabolism","type":"exact"},{"name":"neoxanthin degradation","type":"exact"}],"termid":"GO:1901832"}


id: GO:0061450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Trophoblast cell migration that is accomplished by extension and retraction of a pseudopodium. Trophoblast cells line the outside of the blastocyst.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"embryo implantation","termid":"GO:0007566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophoblast cell migration","termid":"GO:0061450"}


id: PBO:0066701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of mitochondrial RNA processing endoribonuclease pseudogene 5","termid":"PBO:0066701"}


id: PBO:0052198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 2","termid":"PBO:0052198"}


id: PBO:0079792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A13, pseudogene","termid":"PBO:0079792"}


id: GO:0106421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-glutamate(out) + H+(in) = L-glutamate(in) + H+(out).","definition_xrefs":["PMID:29273736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-glutamate:proton antiporter activity","termid":"GO:0106421"}


id: PATO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000555 heat sensitive (obsolete PATO:0000555)","termid":"PATO:0000555"}


id: PBO:0066953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 255","termid":"PBO:0066953"}


id: PBO:0040851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 5","termid":"PBO:0040851"}


id: PBO:0052538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 11","termid":"PBO:0052538"}


id: MOD:01622
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to one of several monohydroxylated tryptophan residues, including 3-hydroxy-L-tryptophan and 7'-hydroxy-L-tryptophan.","definition_xrefs":["Unimod:35#W","OMSSA:90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated tryptophan","synonyms":[{"name":"Oxidation","type":"related"},{"name":"oxyw","type":"exact"}],"termid":"MOD:01622"}


id: PBO:0025530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster assembly protein Isa2","termid":"PBO:0025530"}


id: PBO:0085621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in efficient MVB sorting of proteins to the vacuole; may function as an RSP5 adapter protein for MVB cargos; integral membrane protein localized to vacuolar intralumenal vesicles","termid":"PBO:0085621"}


id: PBO:0087799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthase subunit of trehalose-6-P synthase/phosphatase complex; synthesizes the storage carbohydrate trehalose, which is critically important for survival of long-term desiccation; also found in a monomeric form; expression is induced by the stress response and repressed by the Ras-cAMP pathway; protein abundance increases in response to DNA replication stress and in response to prolonged exposure to boric acid","termid":"PBO:0087799"}


id: FYPO:0003592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the anaphase-promoting complex (APC) occurs to a greater extent than normal. The protein whose binding to the APC may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased anaphase-promoting complex binding","termid":"FYPO:0003592"}


id: PR:Q9USI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.15 gene.","definition_xrefs":["UniProtKB:Q9USI0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.15","synonyms":[{"name":"Spom972h-SPCC794.15","type":"exact"}],"termid":"PR:Q9USI0"}


id: PBO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP16 nucleolar protein","termid":"PBO:0061236"}


id: GO:0035645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell of the intestine.","definition_xrefs":["CL:0002504","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteric smooth muscle cell differentiation","synonyms":[{"name":"intestinal smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035645"}


id: GO:0009156
data:
  {"annotated_genes":["SJAG_02850","SJAG_01661","SJAG_00694","SJAG_03708","SJAG_01814","SJAG_04634","SJAG_00044","SJAG_03164","SJAG_04681","SJAG_00197","SJAG_06634","SJAG_03355","SJAG_04354","SJAG_04709","SJAG_02364","SJAG_04845","SJAG_04123","SJAG_04713","SJAG_04882","SJAG_01070","SJAG_00964","SJAG_04970","SJAG_03140","SJAG_01081","SJAG_00533","SJAG_01298","SJAG_00444","SJAG_01859","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93280,105252,110181],"is_not":false,"summary":null,"term":"GO:0009156"},{"annotations":[77625,76108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[98865,105567,109739,93373,70145,76150,95086,71583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[85200,94052,107193,111893,89057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[112011,73590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[68156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[72527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[103630,59249,74147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[74768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[97301,74769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[110137,87634,88608,84233,83270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[74770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03708":null,"SJAG_03811":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"ribonucleoside monophosphate anabolism","type":"exact"},{"name":"ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"ribonucleoside monophosphate formation","type":"exact"},{"name":"ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009156","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0009156":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null}}


id: SO:1001280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recoding stimulatory signal located upstream of the recoding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_recoding_site","synonyms":[{"name":"five prime recoding site","type":"exact"}],"termid":"SO:1001280"}


id: PBO:0087007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Riboflavin synthase; catalyzes the last step of the riboflavin biosynthesis pathway","termid":"PBO:0087007"}


id: PBO:0091068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ermes regulator Emr1","termid":"PBO:0091068"}


id: GO:0100069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates neuron apoptotic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron apoptotic process by transcription from RNA polymerase II promoter (obsolete GO:0100069)","termid":"GO:0100069"}


id: PR:O14026
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-36 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.02c","synonyms":[{"name":"SET domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set2","type":"exact"},{"name":"lysine N-methyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14026"}


id: PBO:0078034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 24","termid":"PBO:0078034"}


id: FYPO:0009079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of calcofluor and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to calcofluor and sodium dodecyl sulfate","synonyms":[{"name":"resistance to calcofluor and SDS","type":"exact"},{"name":"resistance to calcofluor and SDS during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and SDS in combination","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to calcofluor and SDS","type":"exact"},{"name":"resistant to calcofluor and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009079"}


id: PBO:0058725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6853","termid":"PBO:0058725"}


id: PBO:0026929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_anaphase-promoting_complex","termid":"PBO:0026929"}


id: PBO:0078303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-8","termid":"PBO:0078303"}


id: PR:O43007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade9 gene.","definition_xrefs":["UniProtKB:O43007","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.08","synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade9","type":"exact"}],"termid":"PR:O43007"}


id: PBO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2 like scaffold protein","termid":"PBO:0042169"}


id: GO:0102926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + solanidine = H+ + gamma-chaconine + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"solanidine glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8882"],"termid":"GO:0102926"}


id: PBO:0080567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and FYVE domain containing 2","termid":"PBO:0080567"}


id: PBO:0075604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2","termid":"PBO:0075604"}


id: GO:0044468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of blood coagulation in another organism","synonyms":[{"name":"envenomation resulting in modulation of blood coagulation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044468"}


id: PBO:0066384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REC8 meiotic recombination protein","termid":"PBO:0066384"}


id: GO:0075308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of conidium formation, a process of producing non-motile spores, called conidia, via mitotic asexual reproduction in higher fungi. Conidia are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.","definition_xrefs":["GOC:di","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"is_a","term_name":"regulation of conidium formation","termid":"GO:0075306"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"conidium formation","termid":"GO:0048315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of conidium formation","termid":"GO:0075308"}


id: GO:0032996
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing Bcl3 and Bcl10, which forms when Akt1 is activated by TNF-alpha to phosphorylate Bcl10; the Bcl3-Bcl10 complex is translocated to the nucleus.","definition_xrefs":["PMID:16280327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Bcl3-Bcl10 complex","termid":"GO:0032996"}


id: PBO:0086456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein upregulated in toxic manganese levels; mRNA identified as translated by ribosome profiling data; partially overlaps dubious ORF YBR056C-B; YBR056W-A has a paralog, YDR034W-B, that arose from the whole genome duplication","termid":"PBO:0086456"}


id: PBO:0088425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP binding superfamily, implicated in heme catabolism","termid":"PBO:0088425"}


id: PBO:0034705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase subunit Rad15","termid":"PBO:0034705"}


id: GO:0019579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"aldaric acid catabolic process","synonyms":[{"name":"aldaric acid breakdown","type":"exact"},{"name":"aldaric acid catabolism","type":"exact"},{"name":"aldaric acid degradation","type":"exact"}],"termid":"GO:0019579"}


id: PBO:0080196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 4","termid":"PBO:0080196"}


id: PBO:0078747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10B","termid":"PBO:0078747"}


id: PBO:0038593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 11","termid":"PBO:0038593"}


id: PBO:0056487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAU2 sister chromatid cohesion factor","termid":"PBO:0056487"}


id: GO:0018305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-serinyl tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018305"}


id: GO:0098866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the membrane of a multivesicular body with the apical plasma membrane, resulting in release of exosomes from the cell.","definition_xrefs":["PMID:26459596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192","GO:0044085"],"is_obsolete":false,"name":"multivesicular body fusion to apical plasma membrane","termid":"GO:0098866"}


id: PBO:0061928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 2","termid":"PBO:0061928"}


id: GO:0098633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a collagen fibril.","definition_xrefs":["PMID:21421911","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"collagen fibril binding","termid":"GO:0098633"}


id: GO:0035564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney size","termid":"GO:0035564"}


id: PBO:0044266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 5","termid":"PBO:0044266"}


id: GO:0032552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleotide, any compound consisting of a deoxyribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"deoxyribonucleotide binding","termid":"GO:0032552"}


id: PBO:0050317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 19","termid":"PBO:0050317"}


id: GO:0007190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme adenylate cyclase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adenylate cyclase activity","termid":"GO:0045762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of adenylate cyclase activity","synonyms":[{"name":"adenylate cyclase activation","type":"exact"},{"name":"adenylate cyclase activator","type":"related"},{"name":"adenylyl cyclase activation","type":"exact"}],"termid":"GO:0007190"}


id: GO:0048938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of a glial cell in a lateral line nerve is generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in a lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"}


id: PBO:0072495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 24","termid":"PBO:0072495"}


id: PBO:0084819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084819"}


id: GO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the peroxisomal membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of peroxisomal membrane (obsolete GO:0031231)","synonyms":[{"name":"intrinsic to peroxisomal membrane","type":"narrow"}],"termid":"GO:0031231"}


id: GO:0005948
data:
  {"annotated_genes":["SJAG_03985","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75011,75567],"is_not":false,"summary":null,"term":"GO:0005948"}]},"cv_name":"cellular_component","definition":"A dimeric (a large and a small chain) or tetrameric (two large and two small chains) enzyme complex. Catalyzes the formation of acetolactate from pyruvate.","definition_xrefs":["PMID:16458324","PMID:8756689","GOC:jl","BRENDA:2.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03985":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"acetolactate synthase complex","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"acetohydroxyacid synthase complex","type":"exact"}],"termid":"GO:0005948","terms_by_termid":{"GO:0005948":null}}


id: PBO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 28","termid":"PBO:0072253"}


id: PBO:0071118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 120","termid":"PBO:0071118"}


id: PATO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's formed or tending to form flakes or thin, crisp fragments.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flaky","termid":"PATO:0001805"}


id: GO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-5 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-5 receptor binding","synonyms":[{"name":"IL-5","type":"narrow"},{"name":"interleukin-5 receptor ligand","type":"narrow"}],"termid":"GO:0005137"}


id: PBO:0058748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6872","termid":"PBO:0058748"}


id: PBO:0027535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP-dependent_5'-3'_DNA_helicase_activity","termid":"PBO:0027535"}


id: PBO:0059837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR1 pseudogene 1","termid":"PBO:0059837"}


id: PBO:0034401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dependent_on_(obsolete_dependent_on)","termid":"PBO:0034401"}


id: GO:0042776
data:
  {"annotated_genes":["SJAG_00133","SJAG_MIT37","SJAG_02598","SJAG_MIT15","SJAG_00438","SJAG_00915","SJAG_00542","SJAG_00836","SJAG_03925","SJAG_00985","SJAG_02564","SJAG_03114","SJAG_05204","SJAG_MIT09","SJAG_04422","SJAG_07003","SJAG_04122","SJAG_02105"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84887,88498,88914,89507,90456,97304,98487,99103,99132,100415,103189,103276,104141,111032,114128,114133,114137],"is_not":false,"summary":null,"term":"GO:0042776"},{"annotations":[113120],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The transport of protons across a mitochondrial membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.","definition_xrefs":["ISBN:0716731363","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton motive force-driven ATP synthesis","termid":"GO:0015986"},{"relation_name":"part_of","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"proton motive force-driven mitochondrial ATP synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial ATP synthesis coupled proton transport","type":"exact"},{"name":"mitochondrial proton transport","type":"broad"}],"termid":"GO:0042776","terms_by_termid":{"GO:0042776":null,"GO:1905706":null}}


id: PBO:0062307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 4 pseudogene","termid":"PBO:0062307"}


id: GO:1900264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of DNA-directed DNA polymerase activity","termid":"GO:1900262"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"activation of DNA duplicase activity","type":"exact"},{"name":"activation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"activation of DNA polymerase I","type":"narrow"},{"name":"activation of DNA polymerase II","type":"narrow"},{"name":"activation of DNA polymerase III","type":"narrow"},{"name":"activation of DNA polymerase V activity","type":"narrow"},{"name":"activation of DNA polymerase alpha","type":"narrow"},{"name":"activation of DNA polymerase beta","type":"narrow"},{"name":"activation of DNA polymerase gamma","type":"narrow"},{"name":"activation of DNA replicase activity","type":"exact"},{"name":"activation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"activation of Klenow fragment","type":"narrow"},{"name":"activation of Taq DNA polymerase","type":"narrow"},{"name":"activation of Taq Pol I","type":"narrow"},{"name":"activation of Tca DNA polymerase","type":"narrow"},{"name":"activation of alpha DNA polymerase activity","type":"narrow"},{"name":"activation of beta DNA polymerase activity","type":"narrow"},{"name":"activation of delta DNA polymerase activity","type":"narrow"},{"name":"activation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"activation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"activation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"activation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"activation of duplicase","type":"broad"},{"name":"activation of epsilon DNA polymerase activity","type":"narrow"},{"name":"activation of eta DNA polymerase activity","type":"narrow"},{"name":"activation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"activation of iota DNA polymerase activity","type":"narrow"},{"name":"activation of kappa DNA polymerase activity","type":"narrow"},{"name":"activation of lambda DNA polymerase activity","type":"narrow"},{"name":"activation of mu DNA polymerase activity","type":"narrow"},{"name":"activation of nu DNA polymerase activity","type":"narrow"},{"name":"activation of sequenase","type":"related"},{"name":"activation of sigma DNA polymerase activity","type":"narrow"},{"name":"activation of theta DNA polymerase activity","type":"narrow"},{"name":"activation of zeta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of DNA duplicase activity","type":"exact"},{"name":"positive regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"positive regulation of DNA polymerase I","type":"narrow"},{"name":"positive regulation of DNA polymerase II","type":"narrow"},{"name":"positive regulation of DNA polymerase III","type":"narrow"},{"name":"positive regulation of DNA polymerase V activity","type":"narrow"},{"name":"positive regulation of DNA polymerase alpha","type":"narrow"},{"name":"positive regulation of DNA polymerase beta","type":"narrow"},{"name":"positive regulation of DNA polymerase gamma","type":"narrow"},{"name":"positive regulation of DNA replicase activity","type":"exact"},{"name":"positive regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"positive regulation of Klenow fragment","type":"narrow"},{"name":"positive regulation of Taq DNA polymerase","type":"narrow"},{"name":"positive regulation of Taq Pol I","type":"narrow"},{"name":"positive regulation of Tca DNA polymerase","type":"narrow"},{"name":"positive regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"positive regulation of beta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of delta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"positive regulation of duplicase","type":"broad"},{"name":"positive regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"positive regulation of eta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"positive regulation of iota DNA polymerase activity","type":"narrow"},{"name":"positive regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"positive regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"positive regulation of mu DNA polymerase activity","type":"narrow"},{"name":"positive regulation of nu DNA polymerase activity","type":"narrow"},{"name":"positive regulation of sequenase","type":"related"},{"name":"positive regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"positive regulation of theta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"up regulation of DNA duplicase activity","type":"exact"},{"name":"up regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up regulation of DNA polymerase I","type":"narrow"},{"name":"up regulation of DNA polymerase II","type":"narrow"},{"name":"up regulation of DNA polymerase III","type":"narrow"},{"name":"up regulation of DNA polymerase V activity","type":"narrow"},{"name":"up regulation of DNA polymerase alpha","type":"narrow"},{"name":"up regulation of DNA polymerase beta","type":"narrow"},{"name":"up regulation of DNA polymerase gamma","type":"narrow"},{"name":"up regulation of DNA replicase activity","type":"exact"},{"name":"up regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up regulation of Klenow fragment","type":"narrow"},{"name":"up regulation of Taq DNA polymerase","type":"narrow"},{"name":"up regulation of Taq Pol I","type":"narrow"},{"name":"up regulation of Tca DNA polymerase","type":"narrow"},{"name":"up regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up regulation of duplicase","type":"broad"},{"name":"up regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up regulation of sequenase","type":"related"},{"name":"up regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of DNA duplicase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of DNA polymerase I","type":"narrow"},{"name":"up-regulation of DNA polymerase II","type":"narrow"},{"name":"up-regulation of DNA polymerase III","type":"narrow"},{"name":"up-regulation of DNA polymerase V activity","type":"narrow"},{"name":"up-regulation of DNA polymerase alpha","type":"narrow"},{"name":"up-regulation of DNA polymerase beta","type":"narrow"},{"name":"up-regulation of DNA polymerase gamma","type":"narrow"},{"name":"up-regulation of DNA replicase activity","type":"exact"},{"name":"up-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up-regulation of Klenow fragment","type":"narrow"},{"name":"up-regulation of Taq DNA polymerase","type":"narrow"},{"name":"up-regulation of Taq Pol I","type":"narrow"},{"name":"up-regulation of Tca DNA polymerase","type":"narrow"},{"name":"up-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up-regulation of duplicase","type":"broad"},{"name":"up-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of sequenase","type":"related"},{"name":"up-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"upregulation of DNA duplicase activity","type":"exact"},{"name":"upregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of DNA polymerase I","type":"narrow"},{"name":"upregulation of DNA polymerase II","type":"narrow"},{"name":"upregulation of DNA polymerase III","type":"narrow"},{"name":"upregulation of DNA polymerase V activity","type":"narrow"},{"name":"upregulation of DNA polymerase alpha","type":"narrow"},{"name":"upregulation of DNA polymerase beta","type":"narrow"},{"name":"upregulation of DNA polymerase gamma","type":"narrow"},{"name":"upregulation of DNA replicase activity","type":"exact"},{"name":"upregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"upregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"upregulation of Klenow fragment","type":"narrow"},{"name":"upregulation of Taq DNA polymerase","type":"narrow"},{"name":"upregulation of Taq Pol I","type":"narrow"},{"name":"upregulation of Tca DNA polymerase","type":"narrow"},{"name":"upregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"upregulation of beta DNA polymerase activity","type":"narrow"},{"name":"upregulation of delta DNA polymerase activity","type":"narrow"},{"name":"upregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"upregulation of duplicase","type":"broad"},{"name":"upregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"upregulation of eta DNA polymerase activity","type":"narrow"},{"name":"upregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"upregulation of iota DNA polymerase activity","type":"narrow"},{"name":"upregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"upregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"upregulation of mu DNA polymerase activity","type":"narrow"},{"name":"upregulation of nu DNA polymerase activity","type":"narrow"},{"name":"upregulation of sequenase","type":"related"},{"name":"upregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"upregulation of theta DNA polymerase activity","type":"narrow"},{"name":"upregulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900264"}


id: GO:0006415
data:
  {"annotated_genes":["SJAG_00338","SJAG_00308","SJAG_02704","SJAG_05221","SJAG_03658","SJAG_03949","SJAG_02189","SJAG_00286","SJAG_02812","SJAG_02601","SJAG_05265","SJAG_03232","SJAG_01696","SJAG_04283","SJAG_01518"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61892,76764],"is_not":false,"summary":null,"term":"GO:0006415"},{"annotations":[73476,90420,102560,104508,111217,112635,92067,104509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[100138,76435,97545,91103,94199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[66794,68571],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).","definition_xrefs":["GOC:hjd","ISBN:019879276X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_00338":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02704":null,"SJAG_02812":null,"SJAG_03232":null,"SJAG_03658":null,"SJAG_03949":null,"SJAG_04283":null,"SJAG_05221":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translational termination","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"secondary_identifiers":["GO:0006456","GO:0006443"],"synonyms":[{"name":"protein synthesis termination","type":"broad"},{"name":"translation termination","type":"exact"},{"name":"translational complex disassembly","type":"exact"}],"termid":"GO:0006415","terms_by_termid":{"GO:0002184":null,"GO:0006415":null,"GO:0045905":null,"GO:0070126":null}}


id: PBO:0062215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AL member 2 pseudogene","termid":"PBO:0062215"}


id: PBO:0056174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor","termid":"PBO:0056174"}


id: PBO:0048440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 3","termid":"PBO:0048440"}


id: GO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + acetyl-CoA + H2O = L-2-acetamido-6-oxopimelate + CoA.","definition_xrefs":["RHEA:13085","EC:2.3.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"tetrahydrodipicolinate N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04364","MetaCyc:2.3.1.89-RXN"],"synonyms":[{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydrodipicolinate-2,6-dicarboxylate N2-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate 2-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate acetylase activity","type":"related"},{"name":"tetrahydrodipicolinate:acetyl-CoA acetyltransferase activity","type":"related"}],"termid":"GO:0047200"}


id: GO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the lateral mesoderm into the area in which the heart will develop.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart field specification","termid":"GO:0003128"}


id: PATO:0002006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-D shape","synonyms":[{"name":"2-D projection","type":"related"},{"name":"cross-sectional","type":"related"}],"termid":"PATO:0002006"}


id: GO:0101004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the cytolytic granule.","definition_xrefs":["PMID:17272266","PMID:21247065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"part_of","term_name":"cytolytic granule","termid":"GO:0044194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytolytic granule membrane","termid":"GO:0101004"}


id: SO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H4 protein is tri-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K4_trimethylation_site","synonyms":[{"name":" H4K4me3","type":"exact"},{"name":"H4K4 trimethylation site","type":"exact"}],"termid":"SO:0001950"}


id: GO:0035220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the wing disc over time, from its initial formation through to its metamorphosis to form adult structures including the wing hinge, wing blade and pleura.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc development","termid":"GO:0035220"}


id: PBO:0069592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 866, pseudogene","termid":"PBO:0069592"}


id: PBO:0055096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2514","termid":"PBO:0055096"}


id: GO:0021777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to its commitment to an association neuron fate.","definition_xrefs":["PMID:12593981","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:0021777)","synonyms":[{"name":"BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:0021777"}


id: PBO:0040784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 1","termid":"PBO:0040784"}


id: GO:0036097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in forming the mature 3' end of a miRNA from a pre-miRNA.","definition_xrefs":["GOC:sart","PMID:22055292"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA 3'-end processing (obsolete GO:0036097)","synonyms":[{"name":"miRNA 3'-end processing","type":"broad"},{"name":"microRNA 3'-end processing","type":"broad"},{"name":"pre-miRNA 3'-end processing","type":"exact"}],"termid":"GO:0036097"}


id: MOD:01930
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to D-aspartic acid.","definition_xrefs":["PubMed:9384562","RESID:AA0190#ASN","ChEBI:48094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"D-aspartic acid","termid":"MOD:01942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid (Asn)","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01930"}


id: PBO:0005666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lysine methyltransferase Set11","termid":"PBO:0005666"}


id: GO:0035969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sterol import by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11533229","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035969)","synonyms":[{"name":"positive regulation of sterol import by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of sterol import by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035969"}


id: GO:0110050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(4-oxoglutarate)-L-cysteinylglycine + H2O = 2-oxoglutarate + L-cysteinylglycine.","definition_xrefs":["RHEA:54532","GOC:ka","PMID:28373563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"deaminated glutathione amidase activity","secondary_identifiers":["EC:3.5.1.128"],"termid":"GO:0110050"}


id: PBO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 3","termid":"PBO:0070537"}


id: GO:0047775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + citramalate = acetate + (3S)-citramalyl-CoA.","definition_xrefs":["EC:2.8.3.11","MetaCyc:CITRAMALATE-COA-TRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"citramalate CoA-transferase activity","secondary_identifiers":["RHEA:17621"],"synonyms":[{"name":"acetyl-CoA:citramalate CoA-transferase activity","type":"related"}],"termid":"GO:0047775"}


id: GO:0009612
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mechanical stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chemi-mechanical coupling","type":"related"},{"name":"mechanical stimulus response","type":"exact"}],"termid":"GO:0009612","terms_by_termid":{"GO:0050982":null}}


id: PBO:0110813
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"White-Collar for Neurospora homologS","termid":"PBO:0110813"}


id: PBO:0011124
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Warsaw breakage syndrome","termid":"PBO:0011124"}


id: _global:has_disposition
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_disposition","secondary_identifiers":["RO:0000091"],"termid":"_global:has_disposition"}


id: FYPO:0000251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on galactose carbon source","synonyms":[{"name":"decreased growth on galactose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on galactose carbon source","type":"exact"},{"name":"growth defects, growth inhibition in galactose-based medium","type":"related"},{"name":"reduced cell growth on galactose carbon source","type":"exact"},{"name":"slow cell growth on galactose carbon source","type":"narrow"}],"termid":"FYPO:0000251"}


id: GO:0072316
data:
  {"annotated_genes":["SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106597],"is_not":false,"summary":null,"term":"GO:0072316"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-glucans in the ascus wall that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan catabolic process","termid":"GO:0030980"},{"relation_name":"is_a","term_name":"extracellular polysaccharide catabolic process involved in ascospore release from ascus","termid":"GO:0072000"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0005975"],"is_obsolete":false,"name":"alpha-glucan catabolic process involved in ascospore release from ascus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan breakdown involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan catabolism involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan degradation involved in ascospore release from ascus","type":"exact"}],"termid":"GO:0072316","terms_by_termid":{"GO:0072316":null}}


id: GO:1905482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cytoplasmic sequestering of protein that is involved in G2 DNA damage checkpoint.","definition_xrefs":["PMID:10523629","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of protein involved in G2 DNA damage checkpoint (obsolete GO:1905482)","termid":"GO:1905482"}


id: GO:0016593
data:
  {"annotated_genes":["SJAG_04933","SJAG_00139","SJAG_01151","SJAG_01610","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71175,72420,75621,90813,98505],"is_not":false,"summary":null,"term":"GO:0016593"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p.","definition_xrefs":["PMID:11884586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Cdc73/Paf1 complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"Paf1 complex","type":"exact"},{"name":"Paf1p complex","type":"exact"}],"termid":"GO:0016593","terms_by_termid":{"GO:0016593":null}}


id: GO:0050213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-alpha-pregnan-3,20-dione + NADP+ = progesterone + NADPH.","definition_xrefs":["EC:1.3.1.30","MetaCyc:PROGESTERONE-5-ALPHA-REDUCTASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete progesterone 5-alpha-reductase activity (obsolete GO:0050213)","synonyms":[{"name":"5alpha-pregnan-3,20-dione:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"delta4-steroid 5alpha-reductase (progesterone)","type":"related"},{"name":"progesterone 5a-reductase activity","type":"exact"},{"name":"progesterone 5alpha-reductase activity","type":"related"},{"name":"steroid 5-alpha-reductase activity","type":"broad"}],"termid":"GO:0050213"}


id: GO:0007502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the digestive tract mesoderm over time, from its formation to the mature structure. The digestive tract mesoderm is portion of the middle layer of the three primary germ layers of the embryo which will go on to form part of the digestive tract of the organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive tract mesoderm development","termid":"GO:0007502"}


id: PBO:0082489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytically inactive alanine transaminase; expression is repressed in the presence of alanine and repression is mediated by Nrg1p; ALT2 has a paralog, ALT1, that arose from the whole genome duplication","termid":"PBO:0082489"}


id: GO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 3-diphospho-1D-myo-inositol (1,2,4,5,6)pentakisphosphate.","definition_xrefs":["GOC:jp","PMID:18981179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"inositol hexakisphosphate 3-kinase activity","secondary_identifiers":["MetaCyc:RXN-10971","EC:2.7.4.21"],"termid":"GO:0052724"}


id: FYPO:0002871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip","synonyms":[{"name":"decreased protein localisation to growing cell tip","type":"exact"},{"name":"decreased protein localization to growing cell end","type":"exact"},{"name":"decreased protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0002871"}


id: PBO:0087751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the transmembrane ring of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis and spindle pole body duplication","termid":"PBO:0087751"}


id: FYPO:0007810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type) during a cellular response to a pheromone.","definition_xrefs":["PomBase:mah","PMID:11950884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules","termid":"FYPO:0007809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cytoplasmic microtubules during cellular response to pheromone","synonyms":[{"name":"normal cytoplasmic microtubule morphology during cellular response to pheromone","type":"exact"},{"name":"normal cytoplasmic microtubule structure during cellular response to pheromone","type":"narrow"},{"name":"normal cytoplasmic microtubules during mating projection formation","type":"related"},{"name":"normal cytoplasmic microtubules during response to pheromone","type":"exact"},{"name":"normal microtubules during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0007810"}


id: PBO:0070911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 19","termid":"PBO:0070911"}


id: PBO:0108565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease non-catalytic (ERCC1) subunit Swi10","termid":"PBO:0108565"}


id: GO:0032543
data:
  {"annotated_genes":["SJAG_03585","SJAG_00513","SJAG_04959","SJAG_03461","SJAG_04244","SJAG_00286","SJAG_04889","SJAG_01577","SJAG_02762","SJAG_04788","SJAG_01518","SJAG_00889","SJAG_02324","SJAG_05244","SJAG_04409","SJAG_00315","SJAG_02359","SJAG_04473","SJAG_05271","SJAG_03192","SJAG_16456","SJAG_04367","SJAG_05218","SJAG_00799","SJAG_01478","SJAG_02452","SJAG_01767","SJAG_01463","SJAG_03459","SJAG_05270","SJAG_04738","SJAG_03636","SJAG_04635","SJAG_03040","SJAG_00105","SJAG_02201","SJAG_01352","SJAG_01520","SJAG_00936","SJAG_00103","SJAG_03232","SJAG_04918","SJAG_02071","SJAG_01734","SJAG_01303","SJAG_04019","SJAG_04281","SJAG_03065","SJAG_01727","SJAG_04494","SJAG_05320","SJAG_04862","SJAG_04840","SJAG_02428","SJAG_01413","SJAG_04173","SJAG_00086","SJAG_04753","SJAG_04856","SJAG_01468","SJAG_06110","SJAG_02643","SJAG_07009","SJAG_01473","SJAG_05560","SJAG_00659","SJAG_00844","SJAG_04216","SJAG_00148","SJAG_01797","SJAG_04893","SJAG_01719","SJAG_02067","SJAG_01630","SJAG_00497","SJAG_05008","SJAG_02856","SJAG_04493","SJAG_04207","SJAG_01829","SJAG_03322","SJAG_02615","SJAG_01249","SJAG_00060","SJAG_01517","SJAG_05573","SJAG_01368","SJAG_02302","SJAG_03297","SJAG_04378","SJAG_01045","SJAG_03402","SJAG_02836","SJAG_02977","SJAG_04285","SJAG_00653","SJAG_02721","SJAG_00231","SJAG_03649","SJAG_06253","SJAG_05221","SJAG_03053","SJAG_04351","SJAG_03071","SJAG_04164","SJAG_02777","SJAG_00308","SJAG_03584","SJAG_03550","SJAG_00628","SJAG_04689","SJAG_04929","SJAG_00860","SJAG_02236","SJAG_04490","SJAG_01806","SJAG_01591","SJAG_00944","SJAG_02353","SJAG_05249","SJAG_00782","SJAG_03176","SJAG_04094","SJAG_03284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70390,71869,74552,74681,74721,75154,76300,76940,77060,77460,77993,84049,84137,84784,85222,85611,85665,87136,87239,87322,87648,87735,88448,89455,89821,90098,90104,90116,90847,90947,91525,91814,92184,92219,92479,93530,93548,93554,93555,93776,94645,96601,96792,96803,96960,97742,97788,98078,98532,98775,98883,99138,99390,99456,99810,100281,101114,101262,101441,101800,102148,102499,103317,103453,103456,103512,103545,103591,103833,103944,104702,105171,105461,105696,105977,106082,106390,107498,107629,107728,107976,108150,108697,109549,109819,109933,110444,110607,110776,110861,111204,111348,111454,112163,112537,113038,113153,113192,113498],"is_not":false,"summary":null,"term":"GO:0032543"},{"annotations":[89356],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070143"},{"annotations":[102603],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070144"},{"annotations":[113167],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070146"},{"annotations":[72741],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070150"},{"annotations":[72870],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070158"},{"annotations":[98345,73277,106808,78581],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070125"},{"annotations":[100999,73815,77537,86694,103699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070124"},{"annotations":[91103,76435,97545,94199,100138],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070126"},{"annotations":[71607],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070183"},{"annotations":[93237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070185"},{"annotations":[107927,94254,97395],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070131"},{"annotations":[95961],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. 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id: GO:0046354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"mannan biosynthetic process","synonyms":[{"name":"mannan anabolism","type":"exact"},{"name":"mannan biosynthesis","type":"exact"},{"name":"mannan formation","type":"exact"},{"name":"mannan synthesis","type":"exact"}],"termid":"GO:0046354"}


id: PBO:0063202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP1 antisense RNA 1","termid":"PBO:0063202"}


id: PBO:0039755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein","termid":"PBO:0039755"}


id: GO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an antigenic stimulus, which can be include any number of T cell or B cell epitopes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}


id: GO:0038163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by thrombopoietin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","PMID:19630807","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"thrombopoietin-mediated signaling pathway","synonyms":[{"name":"THPO signaling pathway","type":"exact"},{"name":"THPO/MPL signaling pathway","type":"exact"},{"name":"thrombopoietin receptor signaling pathway","type":"exact"}],"termid":"GO:0038163"}


id: PBO:0045578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUT antisense RNA 1","termid":"PBO:0045578"}


id: GO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the T cell receptor gene.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of T cell receptor genes","termid":"GO:0002568"},{"relation_name":"is_a","term_name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"},{"relation_name":"part_of","term_name":"somatic recombination of T cell receptor gene segments","termid":"GO:0002681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"somatic diversification of T cell receptor genes by N region addition","synonyms":[{"name":"somatic diversification of TCR genes by N region addition","type":"exact"}],"termid":"GO:0002571"}


id: PBO:0090382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex (ER membrane insertion) subunit Get4","termid":"PBO:0090382"}


id: GO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + pyrroloquinoline-quinone = (-)-3-dehydroquinate + pyrroloquinoline-quinol.","definition_xrefs":["RHEA:23672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"quinate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:1.1.99.25-RXN","KEGG_REACTION:R01873","EC:1.1.5.8"],"synonyms":[{"name":"NAD(P)-independent quinate dehydrogenase activity","type":"related"},{"name":"quinate:pyrroloquinoline-quinone 5-oxidoreductase activity","type":"related"},{"name":"quinate:quinone 3-oxidoreductase activity","type":"exact"}],"termid":"GO:0047519"}


id: GO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-arginine amide by hydrolysis and oxidation of an interior Arg-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0082"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-arginine amidation (obsolete GO:0018035)","termid":"GO:0018035"}


id: PR:Q9USR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6.U5 tri-snRNP-associated protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02581","PANTHER:PTHR24006:SF31","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-splicing protein ubp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.07","secondary_identifiers":["UniProtKB:Q9USR2"],"synonyms":[{"name":"Spom972h-USP39","type":"exact"},{"name":"inactive ubiquitin-specific-processing protease 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR2"}


id: PR:O13670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MTO1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02812","PRO:DNx","PANTHER:PTHR11806:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein MTO1 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.06c","secondary_identifiers":["UniProtKB:O13670"],"synonyms":[{"name":"Spom972h-MTO1","type":"exact"}],"termid":"PR:O13670"}


id: PBO:0078053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 43","termid":"PBO:0078053"}


id: PBO:0044998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH3 antisense RNA 1","termid":"PBO:0044998"}


id: PBO:0068823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 61, pseudogene","termid":"PBO:0068823"}


id: GO:0006146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenine, 6-aminopurine, one of the 5 main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"adenine metabolic process","termid":"GO:0046083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"adenine catabolic process","synonyms":[{"name":"adenine breakdown","type":"exact"},{"name":"adenine catabolism","type":"exact"},{"name":"adenine degradation","type":"exact"}],"termid":"GO:0006146"}


id: GO:1903010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone development.","definition_xrefs":["GO_REF:0000058","PMID:22510437","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone development","termid":"GO:1903010"}


id: PR:Q10073
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized CCDC90 family protein C3H1.08c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.08c","synonyms":[{"name":"Spom972h-SPAC3H1.08c","type":"exact"}],"termid":"PR:Q10073"}


id: PBO:0056806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 3","termid":"PBO:0056806"}


id: PBO:0043442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 2","termid":"PBO:0043442"}


id: PBO:0029522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_normal_volume_septated_spheroid_cells_(obsolete_FYPO:0002192)","termid":"PBO:0029522"}


id: PBO:0081562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 486","termid":"PBO:0081562"}


id: PBO:0067099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 140, pseudogene","termid":"PBO:0067099"}


id: GO:0008191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"metalloendopeptidase inhibitor activity","synonyms":[{"name":"metalloprotease inhibitor","type":"narrow"},{"name":"metalloproteinase inhibitor","type":"narrow"}],"termid":"GO:0008191"}


id: PBO:0080656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE2 pseudogene 1","termid":"PBO:0080656"}


id: PBO:0087917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor required for response to pheromones; also required during meiosis; exists in two forms, a slower-migrating form more abundant during vegetative growth and a faster-migrating form induced by pheromone; null mutant exhibits abnormal lipid metabolic phenotype","termid":"PBO:0087917"}


id: PBO:0046385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelium and lymphocyte associated ASCH domain 2","termid":"PBO:0046385"}


id: GO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-quadruplex RNA structure, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad.","definition_xrefs":["PMID:18568163","PMID:19330720","PMID:18294969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"G-quadruplex RNA binding","secondary_identifiers":["Reactome:R-HSA-9836998"],"synonyms":[{"name":"G quadruplex binding","type":"exact"},{"name":"G quartet RNA binding","type":"exact"},{"name":"G quartet binding","type":"broad"},{"name":"G-quartet binding","type":"broad"}],"termid":"GO:0002151"}


id: PBO:0090796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER flavin-containing N,N-dimethylaniline monooxygenase activity Fmo1","termid":"PBO:0090796"}


id: PBO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Rqh1","termid":"PBO:0000617"}


id: PBO:0034402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_downstream_target_(obsolete_has_downstream_target)","termid":"PBO:0034402"}


id: GO:0050982
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103804],"is_not":false,"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events by which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0050982","terms_by_termid":{"GO:0050982":null}}


id: GO:0033731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NAD(P)+ = L-tyrosine + NAD(P)H + CO2.","definition_xrefs":["EC:1.3.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arogenate dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:RXN-14476"],"synonyms":[{"name":"L-arogenate:NAD(P)+ oxidoreductase (decarboxylating) activity","type":"related"},{"name":"arogenic dehydrogenase activity","type":"broad"},{"name":"pretyrosine dehydrogenase activity","type":"broad"}],"termid":"GO:0033731"}


id: GO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epothilone, a drug obtained from the myxobacteria Sporangium cellulosum that interferes with cell division. Some epothilones are being studied as treatments for cancer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"epothilone metabolic process","termid":"GO:0050813"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"epothilone biosynthetic process","synonyms":[{"name":"epothilone anabolism","type":"exact"},{"name":"epothilone biosynthesis","type":"exact"},{"name":"epothilone formation","type":"exact"},{"name":"epothilone synthesis","type":"exact"}],"termid":"GO:0050814"}


id: PBO:0058648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6777","termid":"PBO:0058648"}


id: PBO:0080106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP20 small subunit processome component","termid":"PBO:0080106"}


id: GO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a osteoclast from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.","definition_xrefs":["CL:0000092","GOC:yaf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"is_a","term_name":"bone cell development","termid":"GO:0098751"},{"relation_name":"part_of","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast development","synonyms":[{"name":"osteoclast cell development","type":"exact"}],"termid":"GO:0036035"}


id: PBO:0109643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 37 (pseudogene)","termid":"PBO:0109643"}


id: PBO:0050480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A9","termid":"PBO:0050480"}


id: PBO:0048007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD6 antisense RNA 1","termid":"PBO:0048007"}


id: FYPO:0003738
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114360],"is_not":false,"summary":null,"term":"FYPO:0003738"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes, but show no other signs of having entered mitosis or M phase, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0003738","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003738":null}}


id: PATO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of having physical steadiness.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balance","termid":"PATO:0000185"}


id: GO:0048898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line system over time, from its formation to the mature structure. The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.","definition_xrefs":["ISBN:0125296509","PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"},{"relation_name":"part_of","term_name":"mechanosensory lateral line system development","termid":"GO:0048881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line system development","synonyms":[{"name":"ALL system development","type":"related"}],"termid":"GO:0048898"}


id: MOD:02041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-arginine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-arginine residue","synonyms":[{"name":"XlnkArg","type":"exact"}],"termid":"MOD:02041"}


id: GO:0090701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of a plant organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ identity","termid":"GO:0090701"}


id: PBO:0003465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase gamma subunit (predicted)","termid":"PBO:0003465"}


id: PBO:0089384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone for translation factor EF2, Armadillo-type fold, Hgh1","termid":"PBO:0089384"}


id: PBO:0041604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 1","termid":"PBO:0041604"}


id: PBO:0002954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein","termid":"PBO:0002954"}


id: PBO:0067314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 400, pseudogene","termid":"PBO:0067314"}


id: GO:0030757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,7-tetrahydroxy-3-methoxyflavone + S-adenosyl-L-methionine(1+) = 3',4',5-trihydroxy-3,7-dimethoxyflavone + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.82","RHEA:16181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"3-methylquercitin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.82-RXN","KEGG_REACTION:R05323"],"synonyms":[{"name":"3-methylquercetin 7-O-methyltransferase activity","type":"related"},{"name":"7-OMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5,7-tetrahydroxy-3-methoxyflavone 7-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5,7,3',4'-tetrahydroxy-3-methoxyflavone 7-O-methyltransferase activity","type":"related"},{"name":"flavonol 7-O-methyltransferase activity","type":"related"},{"name":"flavonol 7-methyltransferase activity","type":"related"}],"termid":"GO:0030757"}


id: GO:0010061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"is_a","term_name":"regulation of root morphogenesis","termid":"GO:2000067"},{"relation_name":"regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trichoblast fate specification","termid":"GO:0010061"}


id: GO:0060692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the salivary gland. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in salivary gland development","termid":"GO:0060692"}


id: PBO:0060772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B6","termid":"PBO:0060772"}


id: PBO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_actin_filaments","termid":"PBO:0030016"}


id: GO:0060030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed migration of individual cells and small groups of cells toward the dorsal midline during gastrulation. This process does not require cell rearrangement.","definition_xrefs":["PMID:12062082","GOC:dgf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal convergence","termid":"GO:0060030"}


id: PBO:0085154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome-binding component of the SWR1 complex; SWR1 exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for vacuolar protein sorting","termid":"PBO:0085154"}


id: FYPO:0004502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of an ATPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal positive regulation of ATPase activity","synonyms":[{"name":"normal positive regulation of ATPase activity during mitotic cell cycle","type":"exact"},{"name":"normal positive regulation of ATPase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004502"}


id: PBO:0051856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 2","termid":"PBO:0051856"}


id: PBO:0062737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 4","termid":"PBO:0062737"}


id: PBO:0012830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp4","termid":"PBO:0012830"}


id: PBO:0027029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_telomere","termid":"PBO:0027029"}


id: MOD:00779
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00130. Remap to MOD:00130.","definition_xrefs":["DeltaMass:352","PubMed:358196","PubMed:5337886","PubMed:5529814","Unimod:352","PubMed:11332453"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00779 lysine oxidation to aminoadipic semialdehyde (obsolete MOD:00779)","synonyms":[{"name":"Oxidation of lysine (to aminoadipic semialdehyde)","type":"exact"}],"termid":"MOD:00779"}


id: PBO:0066352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1","termid":"PBO:0066352"}


id: GO:0048378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048378"}


id: PBO:0064216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 2","termid":"PBO:0064216"}


id: PBO:0038703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 16","termid":"PBO:0038703"}


id: SO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a repeat, interrupted by the insertion of another element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"nested_repeat","termid":"SO:0001649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_fragment","synonyms":[{"name":"repeat fragment","type":"exact"}],"termid":"SO:0001050"}


id: GO:0030107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:9368779","PMID:11929129","GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-A specific inhibitory MHC class I receptor activity","termid":"GO:0030107"}


id: GO:0003321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased by the chemicals epinephrine and norepinephrine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"},{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}


id: GO:0004016
data:
  {"annotated_genes":["SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101314],"is_not":false,"summary":null,"term":"GO:0004016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.","definition_xrefs":["EC:4.6.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0009975","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"adenylate cyclase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-170676","Reactome:R-HSA-164377","Reactome:R-HSA-381607","Reactome:R-HSA-5211224","Reactome:R-HSA-5610727","Reactome:R-HSA-9712183","MetaCyc:ADENYLATECYC-RXN","RHEA:15389","Reactome:R-HSA-392129"],"synonyms":[{"name":"3',5'-cyclic AMP synthetase activity","type":"related"},{"name":"ATP diphosphate-lyase (cyclizing) activity","type":"related"},{"name":"ATP diphosphate-lyase (cyclizing; 3',5'-cyclic-AMP-forming) activity","type":"related"},{"name":"ATP pyrophosphate-lyase activity","type":"related"},{"name":"adenyl cyclase activity","type":"related"},{"name":"adenylyl cyclase activity","type":"exact"},{"name":"adenylylcyclase activity","type":"related"},{"name":"cAMP generating peptide activity","type":"related"}],"termid":"GO:0004016","terms_by_termid":{"GO:0004016":null}}


id: PBO:0073393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 7, histone lysine methyltransferase","termid":"PBO:0073393"}


id: PBO:0027210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_vacuoles_present_in_decreased_numbers_during_salt_stress","termid":"PBO:0027210"}


id: PBO:0064420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partner of NOB1 homolog","termid":"PBO:0064420"}


id: PBO:0054378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1774","termid":"PBO:0054378"}


id: PBO:0081928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 970, pseudogene","termid":"PBO:0081928"}


id: GO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte development","termid":"GO:0002063"}


id: PBO:0069460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 725, pseudogene","termid":"PBO:0069460"}


id: GO:0047807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-alkylaminopurine + UDP-D-glucose = 6-alkylamino-7-beta-D-glucosylpurine + H+ + UDP. This reaction is an N-glucosylation event.","definition_xrefs":["MetaCyc:CYTOKININ-7-BETA-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"cytokinin 7-beta-glucosyltransferase activity","secondary_identifiers":["RHEA:23272","KEGG_REACTION:R04071"],"synonyms":[{"name":"UDP-glucose-zeatin 7-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:zeatin 7-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:zeatin 7-glucosyltransferase activity","type":"related"},{"name":"cytokinin 7-b-glucosyltransferase activity","type":"exact"},{"name":"cytokinin 7-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-zeatin 7-glucosyltransferase activity","type":"related"}],"termid":"GO:0047807"}


id: PBO:0042084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 150 pseudogene 1","termid":"PBO:0042084"}


id: PBO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 15","termid":"PBO:0071598"}


id: PBO:0003124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexitol dehydrogenase (predicted)","termid":"PBO:0003124"}


id: PBO:0088801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP","termid":"PBO:0088801"}


id: PBO:0089480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog5","termid":"PBO:0089480"}


id: FYPO:0007647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus in the normal location, has no septum, and progression through the mitotic cell cycle is arrested in M phase.","definition_xrefs":["PomBase:mah","PMID:33506191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"},{"relation_name":"is_a","term_name":"normal nucleus location","termid":"FYPO:0002070"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000004","FYPO:0000631","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest in mitotic M phase and normal nucleus localization","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest in M phase and normal nucleus localization during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested in M with normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in M phase and normal nucleus localization during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitosis and normal nucleus localization","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nuclear localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nuclear position","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localisation","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic M phase arrest and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest in M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic nuclear division arrest and normal nucleus localization","type":"exact"},{"name":"inviable mononucleate aseptate cell arrested in mitotic M phase without nuclear displacement","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"mitotic M-phase arrested elongated inviable mononucleate aseptate vegetative cell with normal nucleus localization","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase with elongated inviable mononucleate aseptate cell and normal nucleus localization","type":"exact"},{"name":"nuclear division arrest without septation (elongated cell) with normal nucleus localization","type":"exact"}],"termid":"FYPO:0007647"}


id: PBO:0065903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB44, member RAS oncogene family","termid":"PBO:0065903"}


id: PBO:0044843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 130B","termid":"PBO:0044843"}


id: PR:P17871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tbp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box-binding protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.08","synonyms":[{"name":"Spom972h-tbp1","type":"exact"},{"name":"TATA sequence-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TATA-binding factor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TATA-box factor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID TBP subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P17871"}


id: GO:0005118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sevenless (sev) protein, a receptor tyrosine kinase.","definition_xrefs":["GOC:ceb","PMID:3151175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sevenless binding","synonyms":[{"name":"sev binding","type":"exact"},{"name":"sev ligand","type":"narrow"},{"name":"sevenless ligand","type":"narrow"}],"termid":"GO:0005118"}


id: PBO:0081368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF205 antisense RNA 1","termid":"PBO:0081368"}


id: GO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Long, dynamic tubular channels, formed by invagination of the nuclear envelope, that extend deep into the nucleoplasm. The channels have an underlying lamina and are implicated in functioning in signaling and transport.","definition_xrefs":["PMID:17959832","PMID:9024685","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleoplasmic reticulum","synonyms":[{"name":"nuclear channels","type":"exact"}],"termid":"GO:0044195"}


id: PBO:0066435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RE1 silencing transcription factor","termid":"PBO:0066435"}


id: SO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of how many strands are present in a nucleotide polymer.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strand_attribute","synonyms":[{"name":"strand attribute","type":"exact"}],"termid":"SO:0000983"}


id: PBO:0085117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA","termid":"PBO:0085117"}


id: PBO:0084530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); NTC contains Prp19p and stabilizes U6 snRNA in catalytic forms of spliceosome containing U2, U5, and U6 snRNAs; interacts with Prp16p to modulate splicing fidelity; isy1 syf2 cells have defective spindles","termid":"PBO:0084530"}


id: GO:0072200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the ureter gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in ureter development","termid":"GO:0072199"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"negative regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"negative regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:0072200"}


id: PBO:0003998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, calcium binding subfamily (predicted)","termid":"PBO:0003998"}


id: GO:0102991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: myristoyl-CoA + H2O = H+ + tetradecanoate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete myristoyl-CoA hydrolase activity (obsolete GO:0102991)","termid":"GO:0102991"}


id: GO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mRNA 3'-end processing that involves the binding to and cleavage of a stem-loop structure. For example, histone mRNAs contain a highly conserved stem-loop sequence at the 3' end of the mRNA with a 6 base pairs (bp) stem and a 4-nt loop. The mRNA is cleaved between these two elements, after the fourth or fifth nucleotide, which is typically an adenosine.","definition_xrefs":["GOC:mah","GOC:tb","PMID:17998288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone mRNA metabolic process","termid":"GO:0008334"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mRNA 3'-end processing by stem-loop binding and cleavage","synonyms":[{"name":"histone mRNA 3' end processing","type":"narrow"}],"termid":"GO:0006398"}


id: GO:0070155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling methionine to methionyl-tRNA in a mitochondrion, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionyl-tRNA aminoacylation","termid":"GO:0006431"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"mitochondrial methionyl-tRNA aminoacylation","termid":"GO:0070155"}


id: GO:0098910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrial cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"}


id: PBO:0079571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 3","termid":"PBO:0079571"}


id: GO:2000278
data:
  {"annotated_genes":["SJAG_00573","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[76008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of DNA anabolism","type":"exact"},{"name":"regulation of DNA biosynthesis","type":"exact"},{"name":"regulation of DNA formation","type":"exact"},{"name":"regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000278","terms_by_termid":{"GO:0032210":null,"GO:1904332":null}}


id: PBO:0081474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 347","termid":"PBO:0081474"}


id: PBO:0030504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bortezomib","termid":"PBO:0030504"}


id: GO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0000114)","synonyms":[{"name":"G1-specific transcription in mitotic cell cycle","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter during G1 phase of cell cycle","type":"exact"},{"name":"regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000114"}


id: PBO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Aim19","termid":"PBO:0032756"}


id: GO:0140843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 7).","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain S7 O-GlcNAc transferase activity","termid":"GO:0140843"}


id: GO:0035301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that binds microtubules in a Hedgehog-dependent manner, and is required for signal transduction by members of the Hedgehog family of proteins. The core components of the complex are the serine/threonine protein kinase Fused, the kinesin motor protein Costal2 (Cos2), and a zinc finger transcription factor (Gli family members in humans, and Cubitus interruptus (Ci) in Drosophila).","definition_xrefs":["PMID:15057936","PMID:10825151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Hedgehog signaling complex","synonyms":[{"name":"HSC","type":"exact"},{"name":"Hedgehog signalling complex","type":"exact"}],"termid":"GO:0035301"}


id: FYPO:0005196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the polyubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein polyubiquitination during cellular response to UV","synonyms":[{"name":"normal protein polyubiquitination during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal protein polyubiquitination during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal protein polyubiquitination during cellular response to ultraviolet light","type":"exact"},{"name":"normal protein polyubiquitinylation during cellular response to UV","type":"related"},{"name":"normal protein polyubiquitylation during cellular response to UV","type":"exact"}],"termid":"FYPO:0005196"}


id: GO:0004245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage at the amino group of hydrophobic residues in insulin, casein, hemoglobin, and a number of other proteins and polypeptides.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete neprilysin activity (obsolete GO:0004245)","synonyms":[{"name":"CALLA","type":"related"},{"name":"CALLA (common acute lymphoblastic leukemia-associated) antigens","type":"related"},{"name":"CALLA antigen","type":"related"},{"name":"CALLA glycoprotein","type":"related"},{"name":"CALLA glycoproteins","type":"related"},{"name":"CD10","type":"related"},{"name":"acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia-associated antigens","type":"related"},{"name":"endopeptidase 24.11","type":"related"},{"name":"endopeptidase-2 activity","type":"broad"},{"name":"enkephalinase activity","type":"related"},{"name":"kidney-brush-border neutral endopeptidase","type":"narrow"},{"name":"kidney-brush-border neutral peptidase","type":"narrow"},{"name":"kidney-brush-border neutral proteinase activity","type":"narrow"},{"name":"membrane metalloendopeptidase activity","type":"narrow"},{"name":"neprilysin activity","type":"exact"},{"name":"neutral endopeptidase 24.11","type":"related"},{"name":"neutral endopeptidase activity","type":"related"},{"name":"neutral metallendopeptidase activity","type":"related"}],"termid":"GO:0004245"}


id: PBO:0005515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp4 (predicted)","termid":"PBO:0005515"}


id: GO:0120078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules that contributes to the formation of a blood vessel network.","definition_xrefs":["GOC:cvs","PMID:28264837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"},{"relation_name":"part_of","term_name":"angiogenic sprout fusion","termid":"GO:0120077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in sprouting angiogenesis","synonyms":[{"name":"cell adhesion involved in blood vessel anastomosis","type":"exact"},{"name":"cell adhesion involved in vascular anastomosis","type":"related"}],"termid":"GO:0120078"}


id: GO:1901057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trimethylenediamine.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00010","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"trimethylenediamine metabolic process","termid":"GO:1901055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine biosynthetic process","synonyms":[{"name":"trimethylenediamine anabolism","type":"exact"},{"name":"trimethylenediamine biosynthesis","type":"exact"},{"name":"trimethylenediamine formation","type":"exact"},{"name":"trimethylenediamine synthesis","type":"exact"}],"termid":"GO:1901057"}


id: GO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure involved in coupling stereocilia to one another in sensory hair cells There are four morphologically distinct types: tip links, horizontal top connectors, shaft connectors and ankle links. Tip links and horizontal top connectors are the only inter-stereocilia links associated with mature cochlea, whereas ankle links appear during development of the auditory hair bundle.","definition_xrefs":["PMID:16775142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium bundle","termid":"GO:0032421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia coupling link","termid":"GO:0002139"}


id: GO:1900583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-orsellinic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"o-orsellinic acid metabolic process","termid":"GO:1900582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"o-orsellinic acid catabolic process","synonyms":[{"name":"o-orsellinic acid breakdown","type":"exact"},{"name":"o-orsellinic acid catabolism","type":"exact"},{"name":"o-orsellinic acid degradation","type":"exact"}],"termid":"GO:1900583"}


id: FYPO:0001621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular arginine level","synonyms":[{"name":"decreased cellular L-arginine level","type":"exact"},{"name":"decreased cellular arginine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular arginine level during vegetative growth","type":"exact"},{"name":"decreased level of arginine in cell","type":"exact"},{"name":"reduced cellular arginine level","type":"exact"},{"name":"reduced level of arginine in cell","type":"exact"}],"termid":"FYPO:0001621"}


id: PR:O94250
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC13B11.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase C13B11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.03c","synonyms":[{"name":"Glx II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC13B11.03c","type":"exact"},{"name":"glyoxalase II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94250"}


id: GO:0090557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.","definition_xrefs":["PMID:22155109","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial intestinal barrier","termid":"GO:0090557"}


id: PBO:0017061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, ASAP domain protein","termid":"PBO:0017061"}


id: FYPO:0001085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered polysaccharide level during vegetative growth","synonyms":[{"name":"abnormal polysaccharide level during vegetative growth","type":"exact"},{"name":"altered cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"altered polysaccharide level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001085"}


id: PBO:0047350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 3","termid":"PBO:0047350"}


id: GO:0048061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards the source of gravity.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gravitaxis","termid":"GO:0042332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive gravitaxis","secondary_identifiers":["GO:0048064"],"synonyms":[{"name":"positive geotactic behavior","type":"exact"},{"name":"positive geotactic behaviour","type":"exact"},{"name":"positive gravitactic behavior","type":"exact"},{"name":"positive gravitactic behaviour","type":"exact"},{"name":"positive taxis in response to gravity","type":"exact"},{"name":"positive taxis in response to gravitytaxis in response to gravitational stimulus","type":"exact"}],"termid":"GO:0048061"}


id: GO:0006140
data:
  {"annotated_genes":["SJAG_02380","SJAG_05314","SJAG_04422","SJAG_01187","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75457,72781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[110670,106656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[85431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[113120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[75460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_02380":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of nucleotide metabolism","type":"exact"}],"termid":"GO:0006140","terms_by_termid":{"GO:0043456":null,"GO:0045820":null,"GO:1905706":null,"GO:1905857":null,"GO:2001211":null}}


id: PBO:0070852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 5","termid":"PBO:0070852"}


id: GO:0019473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including glutarate, by acetylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process","termid":"GO:0019477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-lysine catabolic process to glutarate, by acetylation","secondary_identifiers":["MetaCyc:LYSDEGII-PWY"],"synonyms":[{"name":"L-lysine breakdown to glutarate, by acetylation","type":"exact"},{"name":"L-lysine degradation to glutarate, by acetylation","type":"exact"}],"termid":"GO:0019473"}


id: PBO:0079024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 7-1","termid":"PBO:0079024"}


id: GO:0102334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,polycis-undecaprenyl phosphate + UDP-N,N'-diacetylbacillosamine = N,N'-diacetyl-alpha-D-bacillosaminyl-diphospho-tri-trans,hepta-cis-undecaprenol + UMP.","definition_xrefs":["GOC:pz","EC:2.7.8.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N,N'-diacetylbacilliosaminyl-1-phosphate transferase activity","secondary_identifiers":["RHEA:34515","MetaCyc:RXN-13269"],"termid":"GO:0102334"}


id: PBO:0030277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_processing_during_vegetative_growth","termid":"PBO:0030277"}


id: GO:0046958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A simple form of learning whereby the repeated presence of a stimulus leads to a change in the probability or strength of the response to that stimulus. There is no association of one type of stimulus with another, rather it is a generalized response to the environment.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonassociative learning","synonyms":[{"name":"unconditional response","type":"exact"}],"termid":"GO:0046958"}


id: FYPO:0007956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the duration of microtubule growth events is abnormal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}


id: RO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains","termid":"RO:0001019"}


id: GO:0036440
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA.","definition_xrefs":["RHEA:16845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"citrate synthase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R00351","MetaCyc:CITSYN-RXN","EC:2.3.3.16"],"termid":"GO:0036440","terms_by_termid":{"GO:0004108":null}}


id: GO:0060375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mast cell differentiation, the process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"mast cell differentiation","termid":"GO:0060374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell differentiation","termid":"GO:0060375"}


id: GO:0106215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle fustion with Golgi apparatus.","definition_xrefs":["PMID:26195667","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"negatively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106215"}


id: PBO:0084151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity nicotinamide riboside transporter; also transports thiamine with low affinity; major transporter for 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine) uptake; shares sequence similarity with Thi7p and Thi72p; proposed to be involved in 5-fluorocytosine sensitivity","termid":"PBO:0084151"}


id: PBO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A7","termid":"PBO:0047004"}


id: GO:0004489
data:
  {"annotated_genes":["SJAG_01466","SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106312"},{"annotations":[93972,92234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydrofolate + NAD(P)+ = 5,10-methylenetetrahydrofolate + NAD(P)H + H+.","definition_xrefs":["PMID:26872964","EC:1.5.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R07168","KEGG_REACTION:R01224","GO:0008702","MetaCyc:1.5.1.20-RXN","Reactome:R-HSA-200676"],"synonyms":[{"name":"5,10-CH(2)-H(4)folate reductase activity","type":"related"},{"name":"5,10-CH2-H4folate reductase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"5,10-methylenetetrahydrofolic acid reductase activity","type":"broad"},{"name":"5,10-methylenetetrahydropteroylglutamate reductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"related"},{"name":"MTHFR activity","type":"broad"},{"name":"MetF","type":"related"},{"name":"N(5),N(10)-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"N(5,10)-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"N5,10-methylenetetrahydrofolate reductase activity","type":"related"},{"name":"N5,N10-methylenetetrahydrofolate reductase activity","type":"related"},{"name":"methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"related"},{"name":"methylenetetrahydrofolate reductase (NADPH2)","type":"related"},{"name":"methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"methylenetetrahydrofolic acid reductase activity","type":"broad"}],"termid":"GO:0004489","terms_by_termid":{"GO:0106312":null,"GO:0106313":null}}


id: PBO:0075147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 3","termid":"PBO:0075147"}


id: FYPO:0003686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of a box C/D snoRNA molecule is abnormal.","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abnormal box C/D snoRNA 3'-end processing","synonyms":[{"name":"abnormal box C/D snoRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal box C/D snoRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003686"}


id: PR:Q9USV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfr1 gene.","definition_xrefs":["UniProtKB:Q9USV1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5-dependent recombination DNA repair protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.07","synonyms":[{"name":"DNA repair protein dds20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sfr1","type":"exact"},{"name":"meiotically up-regulated gene 13 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV1"}


id: PBO:0051023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 3","termid":"PBO:0051023"}


id: GO:1900574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emodin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emodin metabolic process","termid":"GO:1900573"},{"relation_name":"is_a","term_name":"quinone catabolic process","termid":"GO:1901662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"emodin catabolic process","synonyms":[{"name":"emodin breakdown","type":"exact"},{"name":"emodin catabolism","type":"exact"},{"name":"emodin degradation","type":"exact"}],"termid":"GO:1900574"}


id: PBO:0077296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 38B","termid":"PBO:0077296"}


id: PBO:0055302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2729","termid":"PBO:0055302"}


id: MOD:01046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-chloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tyrosine","termid":"MOD:01028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-chloro-L-tyrosine","synonyms":[{"name":"3'-ClTyr","type":"exact"}],"termid":"MOD:01046"}


id: PBO:0070598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 65","termid":"PBO:0070598"}


id: BFO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains_process","termid":"BFO:0000067"}


id: GO:0031523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex consisting of Myb and other proteins that regulates site specific DNA replication, gene amplification and transcriptional repression.","definition_xrefs":["PMID:12490953","PMID:15545624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Myb complex","synonyms":[{"name":"Myeloblastosis proto-oncogene protein complex","type":"exact"}],"termid":"GO:0031523"}


id: PBO:0076463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator and scaffold protein tamalin","termid":"PBO:0076463"}


id: FYPO:0003707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing valinomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on valinomycin","synonyms":[{"name":"normal cell population growth in presence of valinomycin","type":"exact"},{"name":"normal cell population growth on valinomycin","type":"exact"},{"name":"normal cellular response to valinomycin","type":"related"},{"name":"normal vegetative cell population growth on valinomycin","type":"exact"}],"termid":"FYPO:0003707"}


id: PBO:0040622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 1","termid":"PBO:0040622"}


id: PBO:0069634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 911, pseudogene","termid":"PBO:0069634"}


id: FYPO:0004005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product binds chromatin over a larger portion of the chromosome than normal.","definition_xrefs":["PMID:18753627","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"increased spatial extent of chromatin binding","termid":"FYPO:0004005"}


id: PBO:0064857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 15A","termid":"PBO:0064857"}


id: PBO:0024811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_relation_between_material_entity_and_a_process","termid":"PBO:0024811"}


id: GO:2000095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"regulation of PCP pathway","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt-JNK signaling pathway","type":"related"},{"name":"regulation of Wnt-PCP signaling pathway","type":"related"},{"name":"regulation of Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of non-canonical Wnt signaling pathway","type":"related"}],"termid":"GO:2000095"}


id: PBO:0046717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 3","termid":"PBO:0046717"}


id: GO:0006957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, alternative pathway","synonyms":[{"name":"complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0006957"}


id: FYPO:0006477
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114266,114434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[114664,114665,114663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic metaphase/anaphase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01330","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["mad2delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"abnormal cell cycle progression through the metaphase/anaphase transition","type":"exact"},{"name":"abnormal metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase cell cycle phase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal onset of mitotic anaphase","type":"related"}],"termid":"FYPO:0006477","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: PBO:0029121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased_during_stationary_phase","termid":"PBO:0029121"}


id: PBO:0043420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD nuclear envelope phosphatase 1 regulatory subunit 1","termid":"PBO:0043420"}


id: PBO:0075994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP2 metalloreductase","termid":"PBO:0075994"}


id: GO:1990462
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"Omega-shaped (as in the Greek capital letter) intracellular membrane-bounded organelle enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum. Omegasomes are the first step of the formation of autophagosomes via the phagophore assembly sites.","definition_xrefs":["GOC:autophagy","GOC:mf","PMID:18725538","PMID:24591649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"omegasome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990462","terms_by_termid":{"GO:0097629":null}}


id: PBO:0056995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 34b","termid":"PBO:0056995"}


id: GO:0072036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"part_of","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"}


id: GO:0098801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by the renal system.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"renal system process","termid":"GO:0003014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal system process","termid":"GO:0098801"}


id: PBO:0067212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 278, pseudogene","termid":"PBO:0067212"}


id: PBO:0046406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPC1 antisense RNA 2","termid":"PBO:0046406"}


id: PBO:0068044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 349","termid":"PBO:0068044"}


id: PR:O74805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.14c","synonyms":[{"name":"Spom972h-myo51","type":"exact"},{"name":"myosin type V-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74805"}


id: FYPO:0004418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, and in which the export of polyadenylated mRNA from the nucleus is decreased. The daughter cells produced by septation are both inviable. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:14511667"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"has_part","term_name":"decreased poly(A)+ mRNA export from nucleus","termid":"FYPO:0002522"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0006551"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0000032","FYPO:0000004","FYPO:0000631","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"cut cell with decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"cut cell with reduced poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"cut with decreased poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"decreased poly(A) mRNA export in cut","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with decreased poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0004418"}


id: PBO:0002990
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CAN1","termid":"PBO:0002990"}


id: PBO:0063875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class F pseudogene 1","termid":"PBO:0063875"}


id: PBO:0066695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 1","termid":"PBO:0066695"}


id: GO:1903634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["PMID:2280766","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ligase activity","termid":"GO:0051352"},{"relation_name":"is_a","term_name":"regulation of aminoacyl-tRNA ligase activity","termid":"GO:1903630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leucine-tRNA ligase activity","synonyms":[{"name":"down regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"down regulation of leucine translase activity","type":"exact"},{"name":"down regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"down regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"down-regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of leucine translase activity","type":"exact"},{"name":"down-regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"downregulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"downregulation of leucine translase activity","type":"exact"},{"name":"downregulation of leucine-tRNA ligase activity","type":"exact"},{"name":"downregulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"inhibition of L-leucine:tRNALeu ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of leucine translase activity","type":"narrow"},{"name":"inhibition of leucine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of leucine-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"negative regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of leucine translase activity","type":"exact"},{"name":"negative regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903634"}


id: GO:0016576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone dephosphorylation (obsolete GO:0016576)","termid":"GO:0016576"}


id: GO:0071682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an endocytic vesicle.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"endocytic vesicle lumen","termid":"GO:0071682"}


id: FYECO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ciclopirox olamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ciclopirox olamine","synonyms":[{"name":"+ ciclopirox olamine","type":"exact"}],"termid":"FYECO:0000423"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: PBO:0046228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 21","termid":"PBO:0046228"}


id: GO:2000096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of non-canonical Wnt signaling pathway","termid":"GO:2000052"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:2000095"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"positive regulation of PCP pathway","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"positive regulation of Wnt-JNK signaling pathway","type":"related"},{"name":"positive regulation of Wnt-PCP signaling pathway","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"positive regulation of non-canonical Wnt signaling pathway","type":"related"}],"termid":"GO:2000096"}


id: PBO:0075159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 15","termid":"PBO:0075159"}


id: GO:2000964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cellooligosaccharide metabolic process","termid":"GO:2000961"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide catabolic process","termid":"GO:2000963"},{"relation_name":"negatively_regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"negative regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000964"}


id: GO:1900123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nodal receptor complex assembly.","definition_xrefs":["GOC:signaling","PMID:15062104","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"nodal receptor complex assembly","termid":"GO:0038099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of nodal receptor complex assembly","synonyms":[{"name":"regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"regulation of nodal receptor complex formation","type":"exact"}],"termid":"GO:1900123"}


id: PBO:0054521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1921","termid":"PBO:0054521"}


id: PBO:0002473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nramp family manganese ion transporter","termid":"PBO:0002473"}


id: GO:0110030
data:
  {"annotated_genes":["SJAG_04287","SJAG_04332","SJAG_02771","SJAG_04280","SJAG_00364","SJAG_03854"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102013,87101,111250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[70795,77417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[73273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to MI phase of the meiotic cell cycle.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle phase transition","termid":"GO:1901993"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"regulates","term_name":"G2/MI transition of meiotic cell cycle","termid":"GO:0008315"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_03854":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of G2/MI transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0110030","terms_by_termid":{"GO:0033315":null,"GO:0110031":null,"GO:0110032":null}}


id: GO:0031861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prolactin-releasing peptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"prolactin-releasing peptide receptor binding","synonyms":[{"name":"prolactin-releasing peptide receptor ligand","type":"narrow"}],"termid":"GO:0031861"}


id: PATO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000250 spinal reflex (obsolete PATO:0000250)","termid":"PATO:0000250"}


id: PBO:0073810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A14 pseudogene 1","termid":"PBO:0073810"}


id: MOD:00541
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 9x(13)C labeled L-phosphotyrosine.","definition_xrefs":["PubMed:12716131","Unimod:185"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O4'-phospho-L-tyrosine","termid":"MOD:00048"},{"relation_name":"is_a","term_name":"9x(13)C labeled residue","termid":"MOD:00540"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled L-phosphotyrosine","synonyms":[{"name":"C13 label (Phosphotyrosine)","type":"related"},{"name":"Label:13C(9)+Phospho","type":"related"}],"termid":"MOD:00541"}


id: GO:0034175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"regulation of TLR12 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034175"}


id: PBO:0087369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT methyltransferase; catalyzes omega-monomethylation of Rps3p on Arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism","termid":"PBO:0087369"}


id: PBO:0030399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030399"}


id: PBO:0048484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCOM1, MYZAP-POLR2M combined locus","termid":"PBO:0048484"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: PBO:0047953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(18)(q22.2)","termid":"PBO:0047953"}


id: GO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by epinephrine","termid":"GO:0003065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by circulating epinephrine","synonyms":[{"name":"positive regulation of heart rate by circulating adrenaline","type":"exact"}],"termid":"GO:0003111"}


id: GO:0044050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via rupture of symbiont sporangia, structures producing and containing spores. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by sporangium lysis (obsolete GO:0044050)","synonyms":[{"name":"interaction with host via substance released by lysis of symbiont sporangium","type":"related"},{"name":"interaction with host via substance released by sporangia lysis","type":"exact"}],"termid":"GO:0044050"}


id: PBO:0075632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2B","termid":"PBO:0075632"}


id: PBO:0040804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e41","termid":"PBO:0040804"}


id: GO:1901639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of XDP.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete XDP catabolic process (obsolete GO:1901639)","synonyms":[{"name":"XDP breakdown","type":"exact"},{"name":"XDP catabolism","type":"exact"},{"name":"XDP degradation","type":"exact"}],"termid":"GO:1901639"}


id: PBO:0083080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responds to stresses including heat, ethanol, and sodium arsenite; involved in [PSI+] propagation; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; potentiated Hsp104p variants decrease TDP-43 proteotoxicity by eliminating its cytoplasmic aggregation","termid":"PBO:0083080"}


id: PR:O43015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2G2.17c gene.","definition_xrefs":["UniProtKB:O43015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase C2G2.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.17c","synonyms":[{"name":"Spom972h-SPBC2G2.17c","type":"exact"}],"termid":"PR:O43015"}


id: PBO:0087244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich, hydrophilic protein; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants; expression is under glucose control; cotranscribed with NAM7 in a cyp1 mutant; ISF1 has a paralog, MBR1, that arose from the whole genome duplication","termid":"PBO:0087244"}


id: PBO:0063178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox 1","termid":"PBO:0063178"}


id: PR:O14108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eta2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein eta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.10","synonyms":[{"name":"Spom972h-eta2","type":"exact"}],"termid":"PR:O14108"}


id: GO:0055118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle contraction","termid":"GO:0055118"}


id: PBO:0051304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR-2 (pseudogene)","termid":"PBO:0051304"}


id: FYPO:0003670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mycophenolic acid. Cells stop growing (and may die) at a concentration of mycophenolic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to mycophenolic acid","synonyms":[{"name":"hypersensitive to mycophenolic acid","type":"exact"},{"name":"sensitive to MPA","type":"exact"},{"name":"sensitive to mycophenolic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to mycophenolic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003670"}


id: PBO:0065339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune exopolyphosphatase 1","termid":"PBO:0065339"}


id: PR:Q9HE16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1399.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.05c","synonyms":[{"name":"Spom972h-toe1","type":"exact"}],"termid":"PR:Q9HE16"}


id: PBO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 7","termid":"PBO:0047548"}


id: PBO:0049278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 1","termid":"PBO:0049278"}


id: PBO:0085171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligomeric mitochondrial matrix chaperone; cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; able to prevent the aggregation of misfolded proteins as well as resolubilize protein aggregates","termid":"PBO:0085171"}


id: GO:0032383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of cholesterol within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"is_a","term_name":"regulation of intracellular sterol transport","termid":"GO:0032380"},{"relation_name":"regulates","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular cholesterol transport","termid":"GO:0032383"}


id: PBO:0079344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 28, pseudogene","termid":"PBO:0079344"}


id: GO:0042175
data:
  {"annotated_genes":["SJAG_02196","SJAG_02640","SJAG_05348","SJAG_01957","SJAG_03992","SJAG_04913","SJAG_00831","SJAG_02264","SJAG_03795","SJAG_00519","SJAG_03850","SJAG_02717","SJAG_01848","SJAG_04165","SJAG_04881","SJAG_04270","SJAG_00717","SJAG_00334","SJAG_00771","SJAG_04583","SJAG_02495","SJAG_01570","SJAG_02804","SJAG_00603","SJAG_00339","SJAG_04090","SJAG_01435","SJAG_02980","SJAG_00295","SJAG_02719","SJAG_03024","SJAG_02488","SJAG_00360","SJAG_03841","SJAG_00437","SJAG_01223","SJAG_02586","SJAG_03878","SJAG_03509","SJAG_01180","SJAG_04451","SJAG_03311","SJAG_01300","SJAG_03162","SJAG_02588","SJAG_04053","SJAG_02903","SJAG_02523","SJAG_03330","SJAG_03670","SJAG_05274","SJAG_04883","SJAG_02885","SJAG_02706","SJAG_04231","SJAG_02204","SJAG_03930","SJAG_04127","SJAG_04550","SJAG_06383","SJAG_01233","SJAG_04471","SJAG_01134","SJAG_05022","SJAG_03333","SJAG_01227","SJAG_02913","SJAG_03281","SJAG_01803","SJAG_01750","SJAG_01389","SJAG_05278","SJAG_00284","SJAG_06425","SJAG_00324","SJAG_04059","SJAG_00053","SJAG_04701","SJAG_00394","SJAG_02418","SJAG_00810","SJAG_00068","SJAG_00222","SJAG_02065","SJAG_01558","SJAG_01127","SJAG_01709","SJAG_04103","SJAG_02867","SJAG_03831","SJAG_04363","SJAG_00846","SJAG_03657","SJAG_05306","SJAG_00948","SJAG_04345","SJAG_02437","SJAG_03955","SJAG_03940","SJAG_00895","SJAG_01051","SJAG_04018","SJAG_00825","SJAG_00554","SJAG_01857","SJAG_04337","SJAG_00557","SJAG_05013","SJAG_00812","SJAG_01307","SJAG_02827","SJAG_03396","SJAG_00370","SJAG_04384","SJAG_02842","SJAG_01642","SJAG_00785","SJAG_04316","SJAG_03943","SJAG_00131","SJAG_03261","SJAG_03933","SJAG_04162","SJAG_00906","SJAG_01321","SJAG_04294","SJAG_01906","SJAG_02032","SJAG_03801","SJAG_02354","SJAG_05219","SJAG_01899","SJAG_01078","SJAG_02080","SJAG_00681","SJAG_04954","SJAG_04938","SJAG_05189","SJAG_01069","SJAG_01006","SJAG_05296","SJAG_04217","SJAG_02776","SJAG_02044","SJAG_01329","SJAG_04915","SJAG_00630","SJAG_03018","SJAG_00328","SJAG_04592","SJAG_02532","SJAG_05016","SJAG_03774","SJAG_00924","SJAG_03066","SJAG_04513","SJAG_04615","SJAG_02716","SJAG_04608","SJAG_02683","SJAG_04023","SJAG_02085","SJAG_03750","SJAG_03715","SJAG_02489","SJAG_03737","SJAG_05414","SJAG_00261","SJAG_01990","SJAG_04435","SJAG_01785","SJAG_04810","SJAG_00434","SJAG_01422","SJAG_02595","SJAG_01527","SJAG_01782","SJAG_00880","SJAG_03506","SJAG_01950","SJAG_06514","SJAG_05311","SJAG_00959","SJAG_04049","SJAG_01356","SJAG_03656","SJAG_01860","SJAG_04110","SJAG_03609","SJAG_04975","SJAG_04904","SJAG_03244","SJAG_04952","SJAG_01160","SJAG_03710","SJAG_00277","SJAG_02208","SJAG_02694","SJAG_03345","SJAG_03235","SJAG_04740","SJAG_04821","SJAG_03032","SJAG_00730","SJAG_00725","SJAG_00919","SJAG_02019","SJAG_04986","SJAG_01999","SJAG_03929","SJAG_04956","SJAG_05327","SJAG_00453","SJAG_02982","SJAG_03315","SJAG_01939","SJAG_04792","SJAG_03812","SJAG_00747","SJAG_03672","SJAG_00999","SJAG_01491","SJAG_03056","SJAG_01563","SJAG_02120","SJAG_00530","SJAG_04370","SJAG_03764","SJAG_01460","SJAG_00426","SJAG_07010","SJAG_00064","SJAG_02330","SJAG_02914","SJAG_01416","SJAG_03170","SJAG_00175","SJAG_04612","SJAG_02056","SJAG_04119","SJAG_04578","SJAG_04319","SJAG_03292"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77925,105772,109960],"is_not":false,"summary":null,"term":"GO:0042175"},{"annotations":[101243,105176,90686],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098554"},{"annotations":[77316,78743,96692,76100,87332,74134,71968,75171],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072546"},{"annotations":[113882,87571,101392,88722,109898,72428,102871,95519,95531,92369,74335,90264,78495,106127,75430,77491,107336,77029,110003,107087,75450,113713,83641,71852,112752,74926,71234,75640,77585,97771,98850,93758,96269,85972,84425,97106,68568,78755,98634,75130,75978,104080,84018,107638,86859,77217,97040,112521,106603,76081,97633,87467,95734,106203,74227,71128,88670,94369,104585,105362,71073,111325,89400,89305,87793,91312,109428,85396,108643,62702,91214,110790,98560,70300,87193,105437,88633,111726,102902,106282,102912,74137,89193,88691,89399,83598,105242,59990,93021,77167,108266,109569,96518,84334,89172,111042,100034,113679,92913,93921,92481,71335,85304,70170,103090,88186,92132,84686,94143,99899,100390,105471,109445,102773,78687,86127,71709,103776,86284,113418,85346,89275,76202,86018,99537,99220,85290,95503,108370,105394,96730,85563,96582,90013,108871,70608,93950,90136,70152,93955,99924,92541,68328,95796,61367,104623,73547,91117,102112,110954,72754,71898,101290,90256,91779,71958,73195,59195,96977,74387,75376,104012,112138,74623,112945,76250,73427,85403,84253,88513,87607,99427,103032,85241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005789"},{"annotations":[114264,64691],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098826"},{"annotations":[76371,71188,103939,106883],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000506"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id: GO:0052182
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id: PR:O13699
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id: PBO:0072601
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id: PBO:0053194
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id: FYPO:0000614
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id: FYPO:0000769
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id: PBO:0042175
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id: PBO:0027766
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id: GO:0046269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene-4-sulfonate, 4-methylbenzenesulfonate, the anion of sulfonic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"toluene-4-sulfonate metabolic process","termid":"GO:0018972"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"toluene-4-sulfonate catabolic process","synonyms":[{"name":"4-toluenesulfonate catabolic process","type":"exact"},{"name":"4-toluenesulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate breakdown","type":"exact"},{"name":"toluene-4-sulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate degradation","type":"exact"},{"name":"toluene-4-sulphonate catabolic process","type":"exact"},{"name":"toluene-4-sulphonate catabolism","type":"exact"}],"termid":"GO:0046269"}


id: PR:P59289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3703 gene.","definition_xrefs":["UniProtKB:P59289","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.05","synonyms":[{"name":"L37-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3703","type":"exact"}],"termid":"PR:P59289"}


id: PBO:0061327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B5","termid":"PBO:0061327"}


id: PBO:0059034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 23B","termid":"PBO:0059034"}


id: FYPO:0001716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal succinate import","termid":"FYPO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased succinate import","synonyms":[{"name":"decreased succinate import across plasma membrane","type":"exact"},{"name":"decreased succinate import during mitotic cell cycle","type":"related"},{"name":"decreased succinate import during vegetative growth","type":"exact"},{"name":"decreased succinate import into cell","type":"exact"},{"name":"decreased succinate uptake","type":"exact"},{"name":"decreased succinic acid import","type":"related"},{"name":"reduced succinate import","type":"exact"}],"termid":"FYPO:0001716"}


id: GO:0061256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesonephric glomerular visceral epithelial cell. A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"},{"relation_name":"is_a","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric podocyte differentiation","synonyms":[{"name":"mesonephric glomerular visceral epithelial cell differentiation","type":"exact"}],"termid":"GO:0061256"}


id: GO:0045604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal cell differentiation","synonyms":[{"name":"regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045604"}


id: PBO:0091369
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant showed a repair profile very similar to that of the rad51delta single mutant","termid":"PBO:0091369"}


id: PBO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: GO:0032578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an aleurone grain.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"aleurone grain membrane","termid":"GO:0032578"}


