# terms

id: GO:0120328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic activity that acts to transfer a methyl group to a DNA molecule, driven by ATP hydrolysis.","definition_xrefs":["PMID:32437639","GOC:krc","PMID:31955845","RHEA:68984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140097","GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0120328"}


id: GO:1901104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracenomycin C.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00174","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"tetracenomycin C metabolic process","synonyms":[{"name":"tetracenomycin C metabolism","type":"exact"}],"termid":"GO:1901104"}


id: PBO:0090129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Any1","termid":"PBO:0090129"}


id: PR:O94246
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase regulatory subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13295:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.06c","secondary_identifiers":["UniProtKB:O94246"],"synonyms":[{"name":"GCS light chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLM","type":"exact"},{"name":"gamma-ECS regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate--cysteine ligase modifier subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94246"}


id: GO:0019920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of internal peptidyl-1-thioglycine, which has an internal C=S bond, instead of an internal C=O bond, in the peptide.","definition_xrefs":["RESID:AA0265","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine","termid":"GO:0018173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"peptidyl-1-thioglycine biosynthetic process, internal","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, internal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, internal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, internal","type":"exact"}],"termid":"GO:0019920"}


id: GO:0003360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the brainstem from its formation to the mature structure. The brainstem is the part of the brain that connects the brain with the spinal cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brainstem development","termid":"GO:0003360"}


id: PR:Q9P7X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- frg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7X3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein frg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.12","synonyms":[{"name":"Spom972h-frg1","type":"exact"}],"termid":"PR:Q9P7X3"}


id: GO:1904827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["PMID:22034194","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of hydrogen sulfide biosynthetic process","termid":"GO:1904826"},{"relation_name":"negatively_regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"down regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down regulation of hydrogen sulfide formation","type":"exact"},{"name":"down regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide formation","type":"exact"},{"name":"down-regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide anabolism","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide formation","type":"exact"},{"name":"downregulation of hydrogen sulfide synthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"inhibition of hydrogen sulfide anabolism","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthetic process","type":"narrow"},{"name":"inhibition of hydrogen sulfide formation","type":"narrow"},{"name":"inhibition of hydrogen sulfide synthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthetic process","type":"narrow"},{"name":"negative regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"negative regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulfide formation","type":"exact"},{"name":"negative regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904827"}


id: GO:1902804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:kmv","PMID:23527112","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle transport","synonyms":[{"name":"down regulation of synaptic vesicle fission","type":"related"},{"name":"down regulation of synaptic vesicle fusion","type":"related"},{"name":"down regulation of synaptic vesicle transport","type":"exact"},{"name":"down-regulation of synaptic vesicle fission","type":"related"},{"name":"down-regulation of synaptic vesicle fusion","type":"related"},{"name":"down-regulation of synaptic vesicle transport","type":"exact"},{"name":"downregulation of synaptic vesicle fission","type":"related"},{"name":"downregulation of synaptic vesicle fusion","type":"related"},{"name":"downregulation of synaptic vesicle transport","type":"exact"},{"name":"inhibition of synaptic vesicle fission","type":"related"},{"name":"inhibition of synaptic vesicle fusion","type":"related"},{"name":"inhibition of synaptic vesicle transport","type":"narrow"},{"name":"negative regulation of synaptic vesicle fission","type":"related"},{"name":"negative regulation of synaptic vesicle fusion","type":"related"}],"termid":"GO:1902804"}


id: GO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:0003275"}


id: PBO:0042442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 2","termid":"PBO:0042442"}


id: GO:0102427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allocryptopine + NADPH + O2 + H+ = 6-hydroxy-allocryptopine + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"allocryptopine 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13828"],"termid":"GO:0102427"}


id: PBO:0038763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3C","termid":"PBO:0038763"}


id: GO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075206)","synonyms":[{"name":"positive regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075206"}


id: FYPO:0003519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylcysteine sulfoxide level","termid":"FYPO:0003522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"increased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"increased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"increased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0003519"}


id: PBO:0005556
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.114","termid":"PBO:0005556"}


id: PBO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.78","termid":"PBO:0001364"}


id: PBO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter A, lysophospholipid","termid":"PBO:0056804"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: PBO:0091253
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CHS2","termid":"PBO:0091253"}


id: GO:1905611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["PMID:23409027","GO_REF:0000059","GOC:bc","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"},{"relation_name":"is_a","term_name":"regulation of mRNA cap binding","termid":"GO:1905610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA cap binding","synonyms":[{"name":"down regulation of mRNA cap binding","type":"exact"},{"name":"down-regulation of mRNA cap binding","type":"exact"},{"name":"downregulation of mRNA cap binding","type":"exact"},{"name":"inhibition of mRNA cap binding","type":"narrow"}],"termid":"GO:1905611"}


id: PBO:0055556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2992","termid":"PBO:0055556"}


id: GO:1900299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of hexasaccharide transport","termid":"GO:1900297"},{"relation_name":"positively_regulates","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of hexasaccharide transport","synonyms":[{"name":"activation of hexasaccharide transport","type":"narrow"},{"name":"up regulation of hexasaccharide transport","type":"exact"},{"name":"up-regulation of hexasaccharide transport","type":"exact"},{"name":"upregulation of hexasaccharide transport","type":"exact"}],"termid":"GO:1900299"}


id: PBO:0030503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nocodazole","termid":"PBO:0030503"}


id: PBO:0057820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3140","termid":"PBO:0057820"}


id: GO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.","definition_xrefs":["UBERON:0002097","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin development","synonyms":[{"name":"animal skin development","type":"exact"}],"termid":"GO:0043588"}


id: GO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phosphoserine + SO32- = L-cysteate + HPO4-.","definition_xrefs":["PMID:19761441","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cysteate synthase activity","secondary_identifiers":["EC:2.5.1.76","MetaCyc:RXN-11108","RHEA:26486"],"termid":"GO:0044686"}


id: GO:0006630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lipid binding (obsolete GO:0006630)","synonyms":[{"name":"lipid binding","type":"exact"}],"termid":"GO:0006630"}


id: PBO:0087465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a nuclear complex with Noc2p and pre-replicative complexes; the Noc2p-Noc3p complex binds to 66S ribosomal precursors to mediate their maturation and intranuclear transport; binds to chromatin at active replication origins, and is required for pre-RC formation and maintenance during DNA replication licensing","termid":"PBO:0087465"}


id: PBO:0053201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0053201"}


id: PBO:0040218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3C","termid":"PBO:0040218"}


id: PBO:0085945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; non-essential gene; expression induced upon calcium shortage; protein abundance increases in response to DNA replication stress","termid":"PBO:0085945"}


id: PR:O13640
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized alpha-1,2-galactosyltransferase C8D2.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.17","synonyms":[{"name":"Spom972h-gmh4","type":"exact"}],"termid":"PR:O13640"}


id: PBO:0079542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 3","termid":"PBO:0079542"}


id: GO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R3/R4 photoreceptors commit to their cell fate. R3 and R4 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3937883","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"},{"relation_name":"part_of","term_name":"R3/R4 cell differentiation","termid":"GO:0048056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"R3/R4 cell fate commitment","termid":"GO:0007464"}


id: PBO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein","termid":"PBO:0001447"}


id: PBO:0017739
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolff-Parkinson-White syndrome","termid":"PBO:0017739"}


id: PBO:0074528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C4","termid":"PBO:0074528"}


id: PBO:0002728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-HIT protein Hit1 (predicted)","termid":"PBO:0002728"}


id: GO:0018769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-6-oxoocta-2,4-dienoate + H2O = H+ + propanoate + cis-2-hydroxypenta-2,4-dienoate.","definition_xrefs":["UM-BBD_reactionID:r0311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-6-oxoocta-2,4-dienoate hydrolase activity","termid":"GO:0018769"}


id: SO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A flanking region located three prime of a specific region.","definition_xrefs":["SO:chado"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_flanking_region","synonyms":[{"name":"3' flanking region","type":"related"},{"name":"three prime flanking region","type":"exact"}],"termid":"SO:0001417"}


id: PBO:0089302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, citrate","termid":"PBO:0089302"}


id: GO:0051455
data:
  {"annotated_genes":["SJAG_00794","SJAG_01805","SJAG_00418","SJAG_03437","SJAG_04076","SJAG_00918","SJAG_03989","SJAG_01224","SJAG_03683","SJAG_01837","SJAG_03220","SJAG_03327","SJAG_02814","SJAG_05220","SJAG_02731","SJAG_02346","SJAG_05319","SJAG_01371","SJAG_01278","SJAG_01775","SJAG_05266","SJAG_04259","SJAG_01211","SJAG_03217","SJAG_03926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84900,85481,86679,89450,90916,91162,93474,94179,96022,96839,97911,100890,102885,103204,104237,104493,105224,105630,105670,108484,109036,109336,111114,112082],"is_not":false,"summary":null,"term":"GO:0051455"},{"annotations":[111856],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis I. During meiosis I sister kinetochores are lying next to each other facing the same spindle pole and monopolar attachment of the chromatid to the spindle occurs.","definition_xrefs":["GOC:tb","GOC:ai","GOC:clt","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"spindle attachment to meiosis I kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"monopolar attachment","type":"related"},{"name":"sister kinetochore mono-orientation","type":"related"}],"termid":"GO:0051455","terms_by_termid":{"GO:0051455":null,"GO:1904967":null}}


id: PBO:0055377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2806","termid":"PBO:0055377"}


id: GO:1905046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","PMID:22393241","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Schwann cell proliferation","termid":"GO:0010625"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"positively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"activation of Schwann cell proliferation involved in axon regeneration","type":"narrow"},{"name":"up regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"up-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"upregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"}],"termid":"GO:1905046"}


id: GO:0008435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to retard or prevent coagulation. Often used in the context of blood or milk coagulation.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete anticoagulant activity (obsolete GO:0008435)","synonyms":[{"name":"anticoagulant activity","type":"exact"}],"termid":"GO:0008435"}


id: GO:0060217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the characteristics of a mature hemangioblast. Hemangioblasts are the proposed common precursor of blood and endothelial lineages.","definition_xrefs":["PMID:9670018","GOC:dph","GOC:bf","PMID:15378083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemangioblast cell differentiation","termid":"GO:0060217"}


id: PBO:0002980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease (predicted)","termid":"PBO:0002980"}


id: PBO:0041396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C6","termid":"PBO:0041396"}


id: PBO:0031739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mating_type_switching","termid":"PBO:0031739"}


id: PBO:0038477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 17, pseudogene","termid":"PBO:0038477"}


id: PBO:0085076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear 5' to 3' single-stranded RNA exonuclease; involved in RNA metabolism, including rRNA and snoRNA processing, as well as poly (A+) dependent and independent mRNA transcription termination; required for cotranscriptional pre-rRNA cleavage; displaces Cdk1p from elongating transcripts, especially as RNAPII reaches the poly(A) site, negatively regulates phosphorylation of the CTD of RNAPII, and inhibits RNAPII transcriptional elongation","termid":"PBO:0085076"}


id: PBO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshift","termid":"PBO:0001898"}


id: PBO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit Rnh201 (predicted)","termid":"PBO:0001448"}


id: GO:0086102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction through inhibition of adenylate cyclase (AC) activity. Binding of acetylcholine to a G protein-coupled (muscarinic) receptor on the surface of the signal-receiving cell results in the activation of an intracellular Gi/o protein. Gi/o inhibits adenylate cyclase to decrease cyclic-AMP (cAMP) levels. Since cAMP binds directly to F-channels to allow an inward flow of sodium (funny current, If current), a reduction in cAMP reduces the funny current to bring about membrane hyperpolarization and a decrease in heart rate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate (obsolete GO:0086102)","synonyms":[{"name":"AC-inhibiting muscarinic receptor signaling pathway involved in negative regulation of heart rate","type":"related"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate via inhibition of adenylate cyclase activity","type":"exact"},{"name":"Gi-coupled G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"broad"},{"name":"adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"muscarinic receptor signalling pathway involved in negative regulation of heart rate by inhibition of If channel","type":"exact"},{"name":"muscarinic receptor signalling pathway involved in negative regulation of heart rate by inhibition of funny current","type":"exact"}],"termid":"GO:0086102"}


id: PBO:0036303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThrE amino acid transmembrane transporter family protein","termid":"PBO:0036303"}


id: PBO:0050891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IER3 antisense RNA 1","termid":"PBO:0050891"}


id: PBO:0013835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase Hem15 (predicted)","termid":"PBO:0013835"}


id: GO:0004164
data:
  {"annotated_genes":["SJAG_02467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112597],"is_not":false,"summary":null,"term":"GO:0004164"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 3 S-adenosyl-L-methionine = diphthine-[translation elongation factor 2] + 3 H+ + 3 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:15485916","RHEA:36415","PMID:3042777","PMID:20873788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0008276","GO:0016741","GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"diphthine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14326","EC:2.1.1.98","Reactome:R-HSA-5358484"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-(3-carboxy-3-aminopropyl)-L-histidine methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:elongation factor 2 methyltransferase activity","type":"related"},{"name":"diphthine methyltransferase activity","type":"related"}],"termid":"GO:0004164","terms_by_termid":{"GO:0004164":null}}


id: PBO:0028222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_splicing","termid":"PBO:0028222"}


id: FYPO:0006767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during the meiotic cell cycle, in cells that have not arrested the meiotic cell cycle under conditions that normally trigger meiotic DNA replication checkpoint signaling and response.","definition_xrefs":["PMID:10521402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity in absence of meiotic DNA replication checkpoint arrest","synonyms":[{"name":"increased cyclin-dependent protein kinase activity with abolished meiotic DNA replication checkpoint arrest","type":"exact"}],"termid":"FYPO:0006767"}


id: PBO:0051455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 6-57","termid":"PBO:0051455"}


id: GO:2000028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoperiodism, flowering.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoperiodism, flowering","synonyms":[{"name":"regulation of photoperiodic control of flowering time","type":"exact"},{"name":"regulation of photoperiodic control of inflorescence development","type":"exact"},{"name":"regulation of response to day length, flowering","type":"exact"},{"name":"regulation of response to night length, flowering","type":"exact"},{"name":"regulation of response to photoperiod, flowering","type":"exact"}],"termid":"GO:2000028"}


id: GO:0048319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the axial mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm morphogenesis","termid":"GO:0048332"},{"relation_name":"part_of","term_name":"axial mesoderm development","termid":"GO:0048318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm morphogenesis","termid":"GO:0048319"}


id: PBO:0086801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YCL001W-A gene has similarity to DOM34 and is present in a region duplicated between chromosomes XIV and III","termid":"PBO:0086801"}


id: FYPO:0003471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has more than one septum apiece during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete multiseptate cell during cellular response to salt stress (obsolete FYPO:0003471)","synonyms":[{"name":"multiseptate cell during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"multiseptate cell during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"multiseptate in response to salt stress","type":"exact"}],"termid":"FYPO:0003471"}


id: GO:0030696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from a donor to the C5 atom of the uridine residue at position 54 in a tRNA molecule.","definition_xrefs":["ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (m5U54) methyltransferase activity (obsolete GO:0030696)","synonyms":[{"name":"RUMT","type":"exact"}],"termid":"GO:0030696"}


id: PBO:0081514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 420","termid":"PBO:0081514"}


id: GO:1904126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any convergent extension that is involved in notochord morphogenesis.","definition_xrefs":["GOC:dph","PMID:24892953","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"notochord morphogenesis","termid":"GO:0048570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}


id: FYPO:0002449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer signal recognition particles (SRPs) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"signal recognition particles present in decreased numbers","synonyms":[{"name":"SRPs present in decreased numbers","type":"exact"},{"name":"decreased level of SRPs","type":"related"},{"name":"decreased signal recognition particle formation during vegetative growth","type":"related"},{"name":"fewer signal recognition particles present during vegetative growth","type":"exact"},{"name":"signal recognition particles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"signal recognition particles present in decreased numbers during vegetative growth","type":"exact"},{"name":"signal recognition particles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002449"}


id: GO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the membrane-derived thylakoid, containing the P680 reaction center. In the light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II","termid":"GO:0009523"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid photosystem II","synonyms":[{"name":"plasma membrane photosystem II","type":"exact"}],"termid":"GO:0030096"}


id: _global:decreased_in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a substance, where the modification is present to a lower extent in the presence than in the absence of the substance.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_in_presence_of","termid":"_global:decreased_in_presence_of"}


id: PBO:0063621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase, muscle","termid":"PBO:0063621"}


id: GO:2001310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["PMID:17574915","PMID:16333108","PMID:18272357","PMID:29966253","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"gliotoxin biosynthetic process","synonyms":[{"name":"gliotoxin synthesis","type":"exact"},{"name":"gliotoxin anabolism","type":"exact"},{"name":"gliotoxin biosynthesis","type":"exact"},{"name":"gliotoxin formation","type":"exact"}],"termid":"GO:2001310"}


id: PBO:0082057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase; catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by phenylalanine or high concentration of tyrosine or tryptophan","termid":"PBO:0082057"}


id: PBO:0046688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit beta lysine methyltransferase","termid":"PBO:0046688"}


id: GO:0035078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by the steroid hormone 20-hydroxyecdysone (ecdysone) that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death by hormones","termid":"GO:0035081"},{"relation_name":"part_of","term_name":"response to ecdysone","termid":"GO:0035075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by ecdysone","termid":"GO:0035078"}


id: PBO:0058129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4431","termid":"PBO:0058129"}


id: PBO:0034634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation_during_meiosis_I_with_split_kinetochore_and_normal_chromosome_separation","termid":"PBO:0034634"}


id: PBO:0083789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA processing and ribosome biogenesis; forms a complex with Utp22p; protein abundance increases in response to DNA replication stress","termid":"PBO:0083789"}


id: PBO:0039303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALK receptor tyrosine kinase","termid":"PBO:0039303"}


id: GO:0008019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete macrophage receptor activity (obsolete GO:0008019)","synonyms":[{"name":"macrophage receptor activity","type":"exact"}],"termid":"GO:0008019"}


id: GO:0007143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline.","definition_xrefs":["GOC:dph","GOC:ems","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"female meiotic nuclear division","synonyms":[{"name":"female meiosis","type":"broad"},{"name":"female meiotic division","type":"broad"}],"termid":"GO:0007143"}


id: PBO:0043356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 2","termid":"PBO:0043356"}


id: PBO:0078038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 28","termid":"PBO:0078038"}


id: PBO:0063151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX6 upstream antisense RNA","termid":"PBO:0063151"}


id: PBO:0086797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR184W is not an essential gene","termid":"PBO:0086797"}


id: PBO:0025535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22 (predicted)","termid":"PBO:0025535"}


id: MOD:00085
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-methyl-L-lysine.","definition_xrefs":["PubMed:3926756","Unimod:34#K","ChEBI:17604","DeltaMass:165","PubMed:11875433","RESID:AA0076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"monomethylated L-lysine","termid":"MOD:01683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-methyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-methylaminohexanoic acid","type":"exact"},{"name":"MOD_RES N6-methyllysine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(zeta)-methyllysine","type":"exact"},{"name":"N-methyl Lysyl","type":"exact"},{"name":"N6-methyl-L-lysine","type":"exact"},{"name":"N6-methylated L-lysine","type":"exact"},{"name":"N6Me1Lys","type":"exact"},{"name":"epsilon-methyllysine","type":"exact"}],"termid":"MOD:00085"}


id: GO:1901747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prephenate(2-).","definition_xrefs":["GOC:TermGenie","PMID:16752890","UniPathway:UPA00120","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"prephenate(2-) metabolic process","termid":"GO:1901745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"prephenate(2-) biosynthetic process","synonyms":[{"name":"prephenate anabolism","type":"exact"},{"name":"prephenate biosynthesis","type":"exact"},{"name":"prephenate formation","type":"exact"},{"name":"prephenate synthesis","type":"exact"},{"name":"prephenate(2-) anabolism","type":"exact"},{"name":"prephenate(2-) biosynthesis","type":"exact"},{"name":"prephenate(2-) formation","type":"exact"},{"name":"prephenate(2-) synthesis","type":"exact"}],"termid":"GO:1901747"}


id: GO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the acrosome from the spermatid Golgi.","definition_xrefs":["GOC:dph","GOC:tb","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"acrosome assembly","synonyms":[{"name":"acrosome formation","type":"exact"}],"termid":"GO:0001675"}


id: PR:Q1MTQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosome subunit biogenesis protein NIP7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23415:SF4","OMA:SCHPO04205","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosome subunit biogenesis protein nip7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.11c","secondary_identifiers":["UniProtKB:Q1MTQ9"],"synonyms":[{"name":"Spom972h-NIP7","type":"exact"}],"termid":"PR:Q1MTQ9"}


id: PBO:0052459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 8","termid":"PBO:0052459"}


id: PBO:0045472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRG1 pseudogene 1","termid":"PBO:0045472"}


id: PBO:0082842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed DL-glycerol-3-phosphate phosphatase; also known as glycerol-1-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and osmotic stress; GPP1 has a paralog, GPP2, that arose from the whole genome duplication","termid":"PBO:0082842"}


id: PBO:0038976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADPGK antisense RNA 1","termid":"PBO:0038976"}


id: PBO:0062938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 3","termid":"PBO:0062938"}


id: FYPO:0008036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at the CENP-A boundary. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:36200823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased nucleosome occupancy at CENP-A boundary","termid":"FYPO:0008036"}


id: PBO:0045891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 3","termid":"PBO:0045891"}


id: PBO:0083502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified non essential genes ERV2/YPR037C and TIP41/YPR040W","termid":"PBO:0083502"}


id: PBO:0083322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SAP1/YER047C","termid":"PBO:0083322"}


id: GO:0003197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion development","termid":"GO:0003197"}


id: PBO:0042739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN pseudogene 2","termid":"PBO:0042739"}


id: PBO:0027493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_miconazole","termid":"PBO:0027493"}


id: PBO:0074956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-7","termid":"PBO:0074956"}


id: PBO:0031474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mercury","termid":"PBO:0031474"}


id: PBO:0070253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 196 pseudogene","termid":"PBO:0070253"}


id: GO:0018264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an isopeptide cross-link between peptidyl-asparagine and peptidyl-glycine to produce N-(L-isoaspartyl)-glycine.","definition_xrefs":["RESID:AA0126"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptide cross-linking via N-(L-isoaspartyl)-glycine (obsolete GO:0018264)","termid":"GO:0018264"}


id: PBO:0073685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 7","termid":"PBO:0073685"}


id: PBO:0040922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer associated ESR1 regulating natural antisense transcript 1","termid":"PBO:0040922"}


id: PBO:0070725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 30","termid":"PBO:0070725"}


id: GO:0031318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a folic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of nutrient","termid":"GO:0009594"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of folic acid","synonyms":[{"name":"detection of folate","type":"exact"},{"name":"folate detection","type":"exact"},{"name":"folate sensing","type":"exact"},{"name":"folic acid detection","type":"exact"},{"name":"folic acid sensing","type":"exact"}],"termid":"GO:0031318"}


id: PBO:0073546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and SYLF domain containing 1","termid":"PBO:0073546"}


id: GO:0034394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the external part of the cell wall and/or plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell surface","synonyms":[{"name":"protein localisation at cell surface","type":"exact"},{"name":"protein localization at cell surface","type":"exact"}],"termid":"GO:0034394"}


id: PBO:0040048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 4","termid":"PBO:0040048"}


id: PBO:0070231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 169 pseudogene","termid":"PBO:0070231"}


id: PR:O94478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug137 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 137 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.11","synonyms":[{"name":"Spom972h-mug137","type":"exact"}],"termid":"PR:O94478"}


id: MOD:01349
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:320#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolyzed N-ethylmaleimide adduct","termid":"MOD:00631"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolyzed N-ethylmaleimide cysteine adduct","synonyms":[{"name":"Nethylmaleimide+water","type":"related"},{"name":"Nethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:01349"}


id: PBO:0028216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0028216"}


id: PBO:0079252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 23 like","termid":"PBO:0079252"}


id: FYPO:0000473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased mitotic recombination","synonyms":[{"name":"increased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"increased mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: increased","type":"related"}],"termid":"FYPO:0000473"}


id: PBO:0091542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter Pho842","termid":"PBO:0091542"}


id: GO:0021669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 6. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dph","GOC:curators","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 formation","termid":"GO:0021669"}


id: GO:0035415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic prometaphase, the stage following prophase in mitosis (in higher eukaryotes) during which the nuclear envelope is disrupted and breaks into membrane vesicles, and the spindle microtubules enter the nuclear region.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic prometaphase (obsolete GO:0035415)","synonyms":[{"name":"regulation of mitotic prometaphase","type":"exact"}],"termid":"GO:0035415"}


id: PBO:0041557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 47","termid":"PBO:0041557"}


id: GO:0016106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquiterpenoid biosynthetic process","synonyms":[{"name":"sesquiterpenoid anabolism","type":"exact"},{"name":"sesquiterpenoid biosynthesis","type":"exact"},{"name":"sesquiterpenoid formation","type":"exact"},{"name":"sesquiterpenoid synthesis","type":"exact"}],"termid":"GO:0016106"}


id: PBO:0036363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human HGH1 ortholog","termid":"PBO:0036363"}


id: GO:0018414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nickel incorporation into metallo-sulfur cluster","synonyms":[{"name":"nickel incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018414"}


id: PBO:0073813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 15","termid":"PBO:0073813"}


id: PBO:0048778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine monophosphate synthase","termid":"PBO:0048778"}


id: PBO:0088713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circularly permuted 1,3-beta-glucanase","termid":"PBO:0088713"}


id: PBO:0084385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity inorganic phosphate (Pi) transporter; acts upstream of Pho81p in regulation of the PHO pathway; expression is independent of Pi concentration and Pho4p activity; contains 12 membrane-spanning segments; PHO87 has a paralog, PHO90, that arose from the whole genome duplication","termid":"PBO:0084385"}


id: GO:0004442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-myo-inositol 1,3-bisphosphate + H2O = D-myo-inositol 1-monophosphate + phosphate.","definition_xrefs":["EC:3.1.3.65","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,-bisphosphate 3-phosphatase (obsolete GO:0004442)","synonyms":[{"name":"inositol-1,4,-bisphosphate 3-phosphatase","type":"exact"}],"termid":"GO:0004442"}


id: PBO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyocyte maturation associated lncRNA","termid":"PBO:0043915"}


id: PBO:0061289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 1","termid":"PBO:0061289"}


id: GO:1902688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["GOC:di","GO_REF:0000058","GOC:TermGenie","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of NAD metabolic process","synonyms":[{"name":"regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"regulation of NAD metabolism","type":"exact"},{"name":"regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"regulation of oxidized NAD metabolic process","type":"exact"},{"name":"regulation of oxidized NAD metabolism","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902688"}


id: PBO:0011965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type(predicted)","termid":"PBO:0011965"}


id: FYPO:0008126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally found only in the cytoplasm  is observed in the nucleoplasm during mitotic M-phase.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic protein mislocalized to nucleoplasm during mitotic M-phase","termid":"FYPO:0008126"}


id: PBO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 15","termid":"PBO:0062116"}


id: GO:0042281
data:
  {"annotated_genes":["SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76205],"is_not":false,"summary":null,"term":"GO:0042281"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of the first glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Man(9)GlcNAc(2)-PP-Dol.","definition_xrefs":["GOC:al","MetaCyc:RXN-5470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["RHEA:30635","EC:2.4.1.267"],"synonyms":[{"name":"dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase activity","type":"exact"}],"termid":"GO:0042281","terms_by_termid":{"GO:0042281":null}}


id: GO:0070914
data:
  {"annotated_genes":["SJAG_02200","SJAG_04190","SJAG_02182","SJAG_00863","SJAG_04150","SJAG_04877","SJAG_01262","SJAG_02199","SJAG_01648","SJAG_00729","SJAG_03898","SJAG_00272","SJAG_00208","SJAG_01010","SJAG_00814","SJAG_02334","SJAG_02818","SJAG_05197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70217,83806,85317,89299,89600,90669,90874,91618,92705,99679,101350,102377,107545,108087],"is_not":false,"summary":null,"term":"GO:0070914"},{"annotations":[76013,90839,104456,98290],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"}]},"cv_name":"biological_process","definition":"A DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site. UV-damage excision repair acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["GOC:mah","PMID:9619100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"UV-damage excision repair","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"AER","type":"related"},{"name":"UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"UVDE-dependent excision repair","type":"exact"},{"name":"UVER","type":"exact"},{"name":"alternative excision repair","type":"related"}],"termid":"GO:0070914","terms_by_termid":{"GO:0070914":null,"GO:1904161":null}}


id: GO:0043573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of two or more leucoplasts by division of one leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid fission","termid":"GO:0043572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucoplast fission","termid":"GO:0043573"}


id: PBO:0075160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 16","termid":"PBO:0075160"}


id: FYPO:0005910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to endoplasmic reticulum stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased protein accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"decreased protein level during cellular response to ER stress","type":"exact"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0005910"}


id: GO:0047924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geraniol + NADP+ = geranial + NADPH.","definition_xrefs":["EC:1.1.1.183","MetaCyc:GERANIOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"geraniol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1163","RHEA:14521"],"synonyms":[{"name":"geraniol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047924"}


id: PBO:0079075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-3","termid":"PBO:0079075"}


id: FYPO:0000933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"decreased protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"decreased protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to microtubule cytoskeleton during vegetative growth","type":"exact"}],"termid":"FYPO:0000933"}


id: PATO:0000861
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000861 proboscis extension reflex value (obsolete PATO:0000861)","termid":"PATO:0000861"}


id: MOD:00391
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-octanoyl-L-threonine.","definition_xrefs":["RESID:AA0386","PubMed:12716131","PubMed:11546772","Unimod:426#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-octanoylated residue","termid":"MOD:00669"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-octanoyl-L-threonine","synonyms":[{"name":"(2S)-2-amino-3-(octanoyloxy)butanoic acid","type":"exact"},{"name":"L-threonine octanoate ester","type":"exact"},{"name":"LIPID O-octanoyl threonine","type":"exact"},{"name":"O-octanoyl-L-threonine","type":"exact"},{"name":"O-octanoylated L-threonine","type":"exact"},{"name":"O3-octanoyl-L-threonine","type":"exact"},{"name":"OOctThr","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00391"}


id: PBO:0065337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protogenin","termid":"PBO:0065337"}


id: PBO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP-Like Protein","termid":"PBO:0004603"}


id: GO:1903166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polycyclic arene stimulus.","definition_xrefs":["PMID:10998501","GOC:mr","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to polycyclic arene","termid":"GO:1903165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to polycyclic arene","termid":"GO:1903166"}


id: GO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The desulfurization of peptidyl-L-cysteine to yield L-alanine and elemental sulfur; peptidyl-L-cysteine persulfide is an intermediate.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine desulfurization (obsolete GO:0018179)","synonyms":[{"name":"peptidyl-cysteine desulfurization","type":"exact"},{"name":"peptidyl-cysteine desulphurization","type":"exact"}],"termid":"GO:0018179"}


id: PBO:0048468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cells missing transcription factor 1","termid":"PBO:0048468"}


id: FYPO:0000943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal spore morphology, i.e. the size, shape, and structure of the spore are indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spore morphology","termid":"FYPO:0000943"}


id: PBO:0084296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intramembrane aspartyl protease of the perinuclear ER membrane; acts in a branch of ER-associated degradation (ERAD) that degrades functional proteins rather than misfolded proteins; regulates abundance of high-affinity plasma membrane transporters, such as Ctr1p and Zrt1p, during the starvation response; has a presenilin fold; member of the GxGD family of intramembrane proteases; closest human homolog is signal peptide peptidase (SPP)","termid":"PBO:0084296"}


id: GO:0099069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial, indirect interaction between a synaptic vesicle membrane and a the preseynaptic membrane active zone. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. This process is distinct from and prior to synaptic vesicle priming and fusion.","definition_xrefs":["GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering involved in exocytosis","termid":"GO:0090522"},{"relation_name":"part_of","term_name":"synaptic vesicle docking","termid":"GO:0016081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0140056","GO:0016192","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle tethering involved in synaptic vesicle exocytosis","termid":"GO:0099069"}


id: PBO:0059187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRG domain binding protein","termid":"PBO:0059187"}


id: GO:1903203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oxidative stress-induced neuron death.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxidative stress-induced neuron death (obsolete GO:1903203)","synonyms":[{"name":"regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"regulation of neuronal cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903203"}


id: PBO:0042450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 3","termid":"PBO:0042450"}


id: PBO:0031318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sorbitol","termid":"PBO:0031318"}


id: PATO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two connected parts, roughly spherical, of different sizes.","definition_xrefs":["PATOC:MH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snowman-shaped","termid":"PATO:0002346"}


id: PR:O14260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.03c gene.","definition_xrefs":["UniProtKB:O14260","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0592 membrane protein C7D4.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.03c","synonyms":[{"name":"Spom972h-SPAC7D4.03c","type":"exact"}],"termid":"PR:O14260"}


id: PBO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase (predicted)","termid":"PBO:0001675"}


id: PBO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter Itr1","termid":"PBO:0001652"}


id: PBO:0044544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein","termid":"PBO:0044544"}


id: GO:0046522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-5-thio-D-ribose + ATP = S-methyl-5-thio-alpha-D-ribose 1-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:22312","EC:2.7.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"S-methyl-5-thioribose kinase activity","secondary_identifiers":["MetaCyc:5-METHYLTHIORIBOSE-KINASE-RXN","KEGG_REACTION:R04143"],"synonyms":[{"name":"5-methylthioribose kinase (phosphorylating)","type":"related"},{"name":"5-methylthioribose kinase activity","type":"exact"},{"name":"ATP:S-methyl-5-thio-D-ribose 1-phosphotransferase activity","type":"related"},{"name":"ATP:S5-methyl-5-thio-D-ribose 1-phosphotransferase activity","type":"related"},{"name":"MTR kinase activity","type":"related"},{"name":"methylthioribose kinase activity","type":"related"}],"termid":"GO:0046522"}


id: PBO:0045554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 6","termid":"PBO:0045554"}


id: GO:0016791
data:
  {"annotated_genes":["SJAG_01906","SJAG_04166","SJAG_02405","SJAG_04964","SJAG_02680","SJAG_00063","SJAG_03126","SJAG_03759","SJAG_00182","SJAG_01862","SJAG_03263","SJAG_01161","SJAG_01970","SJAG_03700","SJAG_03631","SJAG_01404","SJAG_03185","SJAG_04545","SJAG_03310","SJAG_04128","SJAG_02854","SJAG_04501","SJAG_02536","SJAG_00823","SJAG_01790","SJAG_00129","SJAG_04449","SJAG_04264","SJAG_00920","SJAG_01667","SJAG_03714","SJAG_04426","SJAG_02713","SJAG_03131","SJAG_02582","SJAG_03375","SJAG_01055","SJAG_04067","SJAG_02289","SJAG_04870","SJAG_02593","SJAG_00074","SJAG_00600","SJAG_04332","SJAG_02984","SJAG_02433","SJAG_01531","SJAG_00711","SJAG_02356","SJAG_04488","SJAG_02013","SJAG_03108","SJAG_00248","SJAG_05029","SJAG_00880","SJAG_02580","SJAG_04242","SJAG_00214","SJAG_04262","SJAG_00082","SJAG_03624","SJAG_03893","SJAG_02959","SJAG_01286","SJAG_00685","SJAG_03248","SJAG_01672","SJAG_02389","SJAG_01702","SJAG_00039","SJAG_02706","SJAG_01187","SJAG_04579","SJAG_04986","SJAG_01427","SJAG_02853","SJAG_02203","SJAG_03096","SJAG_01646","SJAG_02763","SJAG_02000","SJAG_03739","SJAG_05314","SJAG_03482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71239,73395,78432,93864,95501],"is_not":false,"summary":null,"term":"GO:0016791"},{"annotations":[94566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043716"},{"annotations":[77647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008441"},{"annotations":[78273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002953"},{"annotations":[108954,108955,86263,89984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008253"},{"annotations":[75309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004741"},{"annotations":[105556,74164,83520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003993"},{"annotations":[77983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043874"},{"annotations":[99067,72085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004035"},{"annotations":[78279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"},{"annotations":[109827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103026"},{"annotations":[72782,74394,77531,75458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004331"},{"annotations":[112328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050484"},{"annotations":[75830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004401"},{"annotations":[70230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050483"},{"annotations":[76344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008934"},{"annotations":[66143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052832"},{"annotations":[66144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052833"},{"annotations":[84492,102305,102304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052745"},{"annotations":[103654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990651"},{"annotations":[103655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990649"},{"annotations":[103656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[110731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052829"},{"annotations":[103657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052658"},{"annotations":[110732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004441"},{"annotations":[103658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990650"},{"annotations":[103659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990640"},{"annotations":[103660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990648"},{"annotations":[103661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030487"},{"annotations":[106453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004445"},{"annotations":[105468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036424"},{"annotations":[93193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033549"},{"annotations":[91574,112238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[87330,90646,71231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[71227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"},{"annotations":[83521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004726"},{"annotations":[76069,71383,75515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008195"},{"annotations":[112973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008962"},{"annotations":[77483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[103662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"},{"annotations":[73523,74563,73431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"},{"annotations":[87158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004438"},{"annotations":[74560,74738,73520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"},{"annotations":[73510,77216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"},{"annotations":[99069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008967"},{"annotations":[98038,91437,71831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004721"},{"annotations":[70807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046403"},{"annotations":[78205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004651"},{"annotations":[77943,93194,72830,109316,73646,73286,72850,78083,72839,73974,74463,74185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004722"},{"annotations":[71895,72840,73274,100627,107623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004725"},{"annotations":[71226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008330"},{"annotations":[93307,109069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990738"},{"annotations":[95773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110130"},{"annotations":[92773,78460,89285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[107245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"},{"annotations":[73808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050278"},{"annotations":[95774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050286"},{"annotations":[78688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042392"},{"annotations":[105767,105768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042131"},{"annotations":[73602,77787,74025,75275,78057,78507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.","definition_xrefs":["GOC:curators","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":84,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00063":null,"SJAG_00074":null,"SJAG_00082":null,"SJAG_00129":null,"SJAG_00182":null,"SJAG_00214":null,"SJAG_00248":null,"SJAG_00600":null,"SJAG_00685":null,"SJAG_00711":null,"SJAG_00823":null,"SJAG_00880":null,"SJAG_00920":null,"SJAG_01055":null,"SJAG_01161":null,"SJAG_01187":null,"SJAG_01286":null,"SJAG_01404":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01667":null,"SJAG_01672":null,"SJAG_01702":null,"SJAG_01790":null,"SJAG_01862":null,"SJAG_01906":null,"SJAG_01970":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02203":null,"SJAG_02289":null,"SJAG_02356":null,"SJAG_02389":null,"SJAG_02405":null,"SJAG_02433":null,"SJAG_02536":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02680":null,"SJAG_02706":null,"SJAG_02713":null,"SJAG_02763":null,"SJAG_02853":null,"SJAG_02854":null,"SJAG_02959":null,"SJAG_02984":null,"SJAG_03096":null,"SJAG_03108":null,"SJAG_03126":null,"SJAG_03131":null,"SJAG_03185":null,"SJAG_03248":null,"SJAG_03263":null,"SJAG_03310":null,"SJAG_03375":null,"SJAG_03482":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03700":null,"SJAG_03714":null,"SJAG_03739":null,"SJAG_03759":null,"SJAG_03893":null,"SJAG_04067":null,"SJAG_04128":null,"SJAG_04166":null,"SJAG_04242":null,"SJAG_04262":null,"SJAG_04264":null,"SJAG_04332":null,"SJAG_04426":null,"SJAG_04449":null,"SJAG_04488":null,"SJAG_04501":null,"SJAG_04545":null,"SJAG_04579":null,"SJAG_04870":null,"SJAG_04964":null,"SJAG_04986":null,"SJAG_05029":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0003869","Reactome:R-HSA-9636457","Reactome:R-HSA-9837419","EC:3.1.3.-","GO:0016302","Reactome:R-HSA-4419986"],"synonyms":[{"name":"phosphatase","type":"related"},{"name":"phosphoric monoester hydrolase activity","type":"exact"}],"termid":"GO:0016791","terms_by_termid":{"GO:0002953":null,"GO:0003993":null,"GO:0004035":null,"GO:0004331":null,"GO:0004401":null,"GO:0004438":null,"GO:0004439":null,"GO:0004441":null,"GO:0004445":null,"GO:0004651":null,"GO:0004721":null,"GO:0004722":null,"GO:0004725":null,"GO:0004726":null,"GO:0004741":null,"GO:0004805":null,"GO:0008195":null,"GO:0008253":null,"GO:0008330":null,"GO:0008420":null,"GO:0008441":null,"GO:0008934":null,"GO:0008962":null,"GO:0008967":null,"GO:0016314":null,"GO:0016791":null,"GO:0017017":null,"GO:0030487":null,"GO:0033192":null,"GO:0033549":null,"GO:0033550":null,"GO:0034485":null,"GO:0036424":null,"GO:0042131":null,"GO:0042392":null,"GO:0043716":null,"GO:0043812":null,"GO:0043813":null,"GO:0043874":null,"GO:0046403":null,"GO:0050278":null,"GO:0050286":null,"GO:0050483":null,"GO:0050484":null,"GO:0052658":null,"GO:0052659":null,"GO:0052745":null,"GO:0052829":null,"GO:0052832":null,"GO:0052833":null,"GO:0103026":null,"GO:0110130":null,"GO:0180005":null,"GO:1990439":null,"GO:1990640":null,"GO:1990648":null,"GO:1990649":null,"GO:1990650":null,"GO:1990651":null,"GO:1990738":null}}


id: GO:0043924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to suramin, a naphthalenesulfonic acid compound which is used in the treatment of diseases caused by trypanosomes and worms.","definition_xrefs":["GOC:jl","Wikipedia:Suramin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"suramin binding","synonyms":[{"name":"Germanin binding","type":"exact"}],"termid":"GO:0043924"}


id: GO:0032343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineralocorticoid catabolic process","termid":"GO:0006712"},{"relation_name":"is_a","term_name":"C21-steroid hormone catabolic process","termid":"GO:0008208"},{"relation_name":"is_a","term_name":"aldosterone metabolic process","termid":"GO:0032341"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"aldosterone catabolic process","termid":"GO:0032343"}


id: PATO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmic","termid":"PATO:0000504"}


id: FYPO:0007300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation does not occur. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein aggregate center formation","termid":"FYPO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein aggregate center formation","synonyms":[{"name":"abolished PAC formation","type":"exact"},{"name":"abolished protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abolished protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abolished protein aggregate centre formation","type":"exact"},{"name":"protein aggregate center formation abolished","type":"exact"}],"termid":"FYPO:0007300"}


id: GO:0009390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide.","definition_xrefs":["UM-BBD_enzymeID:e0188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase complex","synonyms":[{"name":"dimethyl sulphoxide reductase complex","type":"exact"}],"termid":"GO:0009390"}


id: SO:0000939
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Feature used for the recombination of genomic material for the purpose of generating diversity of the immune system.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene_recombination_signal_feature","synonyms":[{"name":"vertebrate immune system gene recombination signal feature","type":"exact"}],"termid":"SO:0000939"}


id: PBO:0027239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_streptothricin","termid":"PBO:0027239"}


id: FYPO:0004136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in telomeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at telomere during vegetative growth","termid":"FYPO:0002820"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0007886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at telomeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"abolished telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at telomere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0004136"}


id: GO:0062064
data:
  {"annotated_genes":["SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93055],"is_not":false,"summary":null,"term":"GO:0062064"}]},"cv_name":"molecular_function","definition":"Binding to a box C/D snoRNP complex.","definition_xrefs":["PMID:10679015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNP binding","termid":"GO:0030519"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"box C/D snoRNP complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062064","terms_by_termid":{"GO:0062064":null}}


id: GO:1905263
data:
  {"annotated_genes":["SJAG_00100","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97853,103715],"is_not":false,"summary":null,"term":"GO:1905263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["PMID:26653857","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic DNA double-strand break formation","termid":"GO:1903343"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:1905261"},{"relation_name":"positively_regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0140013","GO:0006310","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"narrow"},{"name":"up regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"up-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"upregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"}],"termid":"GO:1905263","terms_by_termid":{"GO:1905263":null}}


id: PBO:0065738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein 2","termid":"PBO:0065738"}


id: GO:0030665
data:
  {"annotated_genes":["SJAG_01167","SJAG_04517","SJAG_02282","SJAG_04644","SJAG_00379","SJAG_01809","SJAG_02177","SJAG_04609","SJAG_00108","SJAG_04565","SJAG_02805","SJAG_02453","SJAG_00104","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84664,89812],"is_not":false,"summary":null,"term":"GO:0030665"},{"annotations":[96632,108251,76563,108036],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[106875,103689,73832,77197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[108157,90502],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[78375,73468],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-coated vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"clathrin coated vesicle membrane","type":"narrow"}],"termid":"GO:0030665","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030665":null}}


id: PBO:0074351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 1A","termid":"PBO:0074351"}


id: PBO:0056851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 3","termid":"PBO:0056851"}


id: PBO:0050491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B1","termid":"PBO:0050491"}


id: PBO:0071255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 96","termid":"PBO:0071255"}


id: PBO:0078886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-3","termid":"PBO:0078886"}


id: GO:1900552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving asperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"asperfuranone metabolic process","synonyms":[{"name":"asperfuranone metabolism","type":"exact"}],"termid":"GO:1900552"}


id: PBO:0044206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 4","termid":"PBO:0044206"}


id: FYPO:0004314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the CENP-A containing chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to CENP-A containing chromatin","synonyms":[{"name":"normal protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"normal protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric core region chromatin","type":"exact"}],"termid":"FYPO:0004314"}


id: GO:0033886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2- and 3-sulfate groups of the polysulfates of cellulose and charonin.","definition_xrefs":["EC:3.1.6.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"cellulose-polysulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.7-RXN"],"synonyms":[{"name":"cellulose-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0033886"}


id: FYPO:0000568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal shmoo directionality","termid":"FYPO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"abnormal shmoo formation","synonyms":[{"name":"abnormal conjugation tube formation","type":"exact"},{"name":"abnormal mating projection assembly","type":"exact"},{"name":"abnormal mating projection formation","type":"exact"},{"name":"abnormal shmoo assembly","type":"exact"},{"name":"shmoo formation: abnormal","type":"related"}],"termid":"FYPO:0000568"}


id: GO:0046688
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70928],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010273"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to copper ion","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"copper sensitivity/resistance","type":"related"},{"name":"response to copper","type":"exact"}],"termid":"GO:0046688","terms_by_termid":{"GO:0010273":null}}


id: PBO:0087039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L19A; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal; homologous to mammalian ribosomal protein L19, no bacterial homolog; RPL19A has a paralog, RPL19B, that arose from the whole genome duplication","termid":"PBO:0087039"}


id: PBO:0053902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1192","termid":"PBO:0053902"}


id: GO:0090071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of ribosome biogenesis","termid":"GO:0090069"},{"relation_name":"negatively_regulates","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"negative regulation of ribosome biogenesis","termid":"GO:0090071"}


id: PBO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 4","termid":"PBO:0043509"}


id: GO:0072679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development.","definition_xrefs":["GOC:BHF","CL:0000893","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymocyte migration","synonyms":[{"name":"immature T cell migration","type":"related"},{"name":"immature T lymphocyte migration","type":"related"},{"name":"immature T-cell migration","type":"related"},{"name":"immature T-lymphocyte migration","type":"related"},{"name":"thymic lymphocyte migration","type":"exact"}],"termid":"GO:0072679"}


id: PBO:0085021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinic acid mononucleotide adenylyltransferase; catalyzes the transfer of the adenylyl moiety of ATP to nicotinamide mononucleotide to form NAD; involved in de novo and salvage synthesis of NAD(+); homolog of human NMNAT; NMA2 has a paralog, NMA1, that arose from the whole genome duplication","termid":"PBO:0085021"}


id: PBO:0040287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 2","termid":"PBO:0040287"}


id: PBO:0054130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1496","termid":"PBO:0054130"}


id: PBO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim21 (predicted)","termid":"PBO:0004947"}


id: GO:0043657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell within a host organism. Includes the host plasma membrane and any external encapsulating structures such as the host cell wall and cell envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell","termid":"GO:0043657"}


id: PATO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's lacking odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorless","termid":"PATO:0001208"}


id: PBO:0027773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_4-amino-1-methyl-1H-imidazole-5-carboselenoamide","termid":"PBO:0027773"}


id: PBO:0056457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 3","termid":"PBO:0056457"}


id: PATO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light orange","termid":"PATO:0001255"}


id: PBO:0073676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein gamma","termid":"PBO:0073676"}


id: PBO:0057255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 466","termid":"PBO:0057255"}


id: PR:O13984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication-associated recombination protein A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase WRNIP1 homolog C26H5.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.02c","secondary_identifiers":["UniProtKB:O13984"],"synonyms":[{"name":"Spom972h-rarA","type":"exact"}],"termid":"PR:O13984"}


id: PBO:0043304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin like 1, pseudogene","termid":"PBO:0043304"}


id: GO:0033164
data:
  {"annotated_genes":["SJAG_03056","SJAG_04770","SJAG_00295"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83311,86906,97776],"is_not":false,"summary":null,"term":"GO:0033164"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->6)-D-mannosyl-D-mannose linkage.","definition_xrefs":["PMID:2644248","PMID:16878994","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,6-mannosyltransferase activity","termid":"GO:0000009"},{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_03056":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"glycolipid 1,6-alpha-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.1.232","MetaCyc:2.4.1.232-RXN"],"synonyms":[{"name":"GDP-mannose:glycolipid 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:oligosaccharide 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:oligosaccharide 6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 6-alpha-mannosyltransferase activity","type":"exact"},{"name":"initiation-specific alpha-1,6-mannosyltransferase activity","type":"related"}],"termid":"GO:0033164","terms_by_termid":{"GO:0033164":null}}


id: PBO:0044350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 35","termid":"PBO:0044350"}


id: PBO:0075003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-14","termid":"PBO:0075003"}


id: PBO:0084028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi-localized protein with homology to gamma-adaptin; interacts with and regulates Arf1p and Arf2p in a GTP-dependent manner in order to facilitate traffic through the late Golgi; GGA1 has a paralog, GGA2, that arose from the whole genome duplication","termid":"PBO:0084028"}


id: GO:0004783
data:
  {"annotated_genes":["SJAG_05027","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77185,83577],"is_not":false,"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 NADP+ + 3 H2O = sulfite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite reductase activity","termid":"GO:0016002"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sulfite reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:SULFITE-REDUCT-RXN","EC:1.8.1.2"],"synonyms":[{"name":"H2S-NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent sulfite reductase activity","type":"related"},{"name":"NADPH-sulfite reductase activity","type":"related"},{"name":"NADPH:sulfite reductase flavoprotein","type":"related"},{"name":"hydrogen-sulfide:NADP+ oxidoreductase activity","type":"related"},{"name":"sulfite (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"sulphite reductase (NADPH) activity","type":"exact"}],"termid":"GO:0004783","terms_by_termid":{"GO:0004783":null}}


id: GO:0098968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of a neurotransmitter receptor complex from the postsynaptic membrane to the postsynaptic early endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"protein localization to postsynapse","termid":"GO:0062237"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"},{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"},{"relation_name":"is_a","term_name":"protein localization to early endosome","termid":"GO:1902946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor transport postsynaptic membrane to endosome","termid":"GO:0098968"}


id: SO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a sequence that is regulated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated","termid":"SO:0000119"}


id: PBO:0038544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 16A, phospholipase","termid":"PBO:0038544"}


id: GO:0014914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast cell to attain its fully functional state involved in muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast maturation","termid":"GO:0048628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast maturation involved in muscle regeneration","termid":"GO:0014914"}


id: GO:0018909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dodecyl sulfate, commonly found as sodium dodecyl sulfate (SDS), a component of a variety of synthetic surfactants.","definition_xrefs":["UM-BBD_pathwayID:dds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dodecyl sulfate metabolic process","synonyms":[{"name":"dodecyl sulfate metabolism","type":"exact"},{"name":"dodecyl sulphate metabolic process","type":"exact"},{"name":"dodecyl sulphate metabolism","type":"exact"}],"termid":"GO:0018909"}


id: PR:P87214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uroporphyrinogen-III synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01252","PANTHER:PTHR12390:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.08","secondary_identifiers":["UniProtKB:P87214"],"synonyms":[{"name":"Spom972h-UROS","type":"exact"},{"name":"UROIIIS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UROS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hydroxymethylbilane hydrolyase [cyclizing] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uroporphyrinogen-III cosynthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87214"}


id: GO:0141053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2A substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004842"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016740","GO:0003674","GO:0004842","GO:0016746","GO:0019787"],"is_obsolete":false,"name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}


id: PBO:0044455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 34, pseudogene","termid":"PBO:0044455"}


id: PBO:0077949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 8-2","termid":"PBO:0077949"}


id: MOD:00747
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a sodium atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium containing modified residue","synonyms":[{"name":"NaRes","type":"exact"}],"termid":"MOD:00747"}


id: RO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"before_or_simultaneous_with","termid":"RO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simultaneous_with","termid":"RO:0002082"}


id: CHEBI:29105
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A zinc cation that has formula Zn.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc(2+)","termid":"CHEBI:29105"}


id: PBO:0085003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of cytosolic calcium homeostasis; localizes to the plasma membrane, concentrating at the bud neck during cell division; regulated by Crz1p through a CDRE promoter element; non-essential gene; putative transporter with sequence similarity to human SLC10A7; functional homolog of C. albicans RCH1","termid":"PBO:0085003"}


id: PBO:0089744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase Ipp1","termid":"PBO:0089744"}


id: PBO:0083830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanol acetyltransferase; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0083830"}


id: PBO:0046538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 1","termid":"PBO:0046538"}


id: PBO:0065492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 1","termid":"PBO:0065492"}


id: PBO:0039400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 5","termid":"PBO:0039400"}


id: FYPO:0004875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of allyl alcohol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to allyl alcohol","synonyms":[{"name":"resistance to 3-propenol","type":"exact"},{"name":"resistance to allyl alcohol during mitotic cell cycle","type":"related"},{"name":"resistance to allyl alcohol during vegetative growth","type":"exact"},{"name":"resistance to allylalcohol","type":"exact"},{"name":"resistant to allyl alcohol","type":"exact"}],"termid":"FYPO:0004875"}


id: FYPO:0006450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes histone H3 acetyltransferase activity is altered. For example, preference for modified (e.g. methylated) H3 molecules may be enhanced or diminished.","definition_xrefs":["PomBase:mah","PMID:26401015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"},{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000641","FYPO:0005447","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"altered histone H3 acetyltransferase substrate specificity","synonyms":[{"name":"altered H3 histone acetyltransferase substrate specificity","type":"exact"}],"termid":"FYPO:0006450"}


id: PBO:0046679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic testis differentiation homolog A","termid":"PBO:0046679"}


id: PBO:0078894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 5-1","termid":"PBO:0078894"}


id: PBO:0049821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC11 antisense RNA 1","termid":"PBO:0049821"}


id: PBO:0075290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 30","termid":"PBO:0075290"}


id: GO:0140066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The crotonylation of a lysine residue in a protein. Crotonyl is the univalent radical CH3-CH=CH-CO- derived from crotonic acid.","definition_xrefs":["Wikipedia:crotonyl","PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}


id: FYPO:0008095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during G0.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"increased cell size during G0","termid":"FYPO:0008095"}


id: PR:Q9Y7R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSIG family protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.05c","secondary_identifiers":["UniProtKB:Q9Y7R5"],"synonyms":[{"name":"SPCC306.05c","type":"related"},{"name":"Spom972h-INSIG1","type":"exact"}],"termid":"PR:Q9Y7R5"}


id: GO:0000974
data:
  {"annotated_genes":["SJAG_00859","SJAG_04694","SJAG_01408","SJAG_00414","SJAG_00446","SJAG_00911","SJAG_01214","SJAG_04497","SJAG_02722","SJAG_02844","SJAG_04783","SJAG_03687","SJAG_02227","SJAG_04898","SJAG_02304","SJAG_03711","SJAG_04117","SJAG_02078","SJAG_00639"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70131,71871,71949,72908,73064,76389,76864,76921,91199,91757,93577,101945,102551,103028,104571,106564,107019,108351,111152],"is_not":false,"summary":null,"term":"GO:0000974"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.","definition_xrefs":["GOC:krc","PMID:16540691","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00414":null,"SJAG_00446":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01214":null,"SJAG_01408":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02304":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Prp19 complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"NTC","type":"related"},{"name":"Prp19/CDC5 complex","type":"narrow"},{"name":"nineteen complex","type":"narrow"}],"termid":"GO:0000974","terms_by_termid":{"GO:0000974":null}}


id: GO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete copper electron carrier (obsolete GO:0015003)","synonyms":[{"name":"copper electron carrier","type":"exact"}],"termid":"GO:0015003"}


id: GO:0003911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + nicotinamide nucleotide + deoxyribonucleotide(n+m).","definition_xrefs":["EC:6.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligase activity","termid":"GO:0003909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"DNA ligase (NAD+) activity","secondary_identifiers":["MetaCyc:DNA-LIGASE-NAD+-RXN"],"synonyms":[{"name":"DNA joinase activity","type":"broad"},{"name":"DNA ligase (NAD)","type":"related"},{"name":"DNA repair enzyme activity","type":"related"},{"name":"DNA-joining enzyme","type":"related"},{"name":"deoxyribonucleate ligase","type":"broad"},{"name":"deoxyribonucleic acid joinase","type":"broad"},{"name":"deoxyribonucleic acid ligase","type":"broad"},{"name":"deoxyribonucleic joinase","type":"broad"},{"name":"deoxyribonucleic ligase","type":"broad"},{"name":"deoxyribonucleic repair enzyme","type":"related"},{"name":"deoxyribonucleic-joining enzyme","type":"related"},{"name":"poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming, NMN-forming)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD(+)) activity","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase","type":"broad"},{"name":"polynucleotide ligase (NAD(+)) activity","type":"related"},{"name":"polynucleotide ligase (NAD)","type":"related"},{"name":"polynucleotide ligase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase activity","type":"related"}],"termid":"GO:0003911"}


id: PBO:0074479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD specific E3 ubiquitin protein ligase 1","termid":"PBO:0074479"}


id: PBO:0051326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-14 (pseudogene)","termid":"PBO:0051326"}


id: GO:0036446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an undifferentiated cell acquires the features of a myofibroblast cell.","definition_xrefs":["CL:0000186","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast differentiation","synonyms":[{"name":"myofibroblast cell differentiation","type":"exact"}],"termid":"GO:0036446"}


id: PBO:0091169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase peripheral stalk assembly factor Ina17","termid":"PBO:0091169"}


id: GO:0051278
data:
  {"annotated_genes":["SJAG_00876","SJAG_03057","SJAG_01288","SJAG_04666","SJAG_04483","SJAG_00424","SJAG_02222","SJAG_00610","SJAG_01028","SJAG_04236","SJAG_03587","SJAG_01453","SJAG_02916","SJAG_00218","SJAG_02278","SJAG_05285","SJAG_04184","SJAG_01835","SJAG_01290","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[104645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[77608,72946,73129,70819,71604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[83864,87261,87252,101511,111005,104647,103155,108417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[88065,83320],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[90546,85188,98310,88071],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the polysaccharides which make up the fungal-type cell wall.","definition_xrefs":["GOC:ai","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide metabolic process","termid":"GO:0071966"},{"relation_name":"part_of","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"fungal-type cell wall polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cell wall polysaccharide anabolism","type":"broad"},{"name":"cell wall polysaccharide formation","type":"broad"},{"name":"cell wall polysaccharide synthesis","type":"broad"},{"name":"chitin- and beta-glucan-containing cell wall polysaccharide biosynthetic process","type":"narrow"}],"termid":"GO:0051278","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0058719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6847","termid":"PBO:0058719"}


id: GO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"alkane catabolic process","termid":"GO:0043448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"methane catabolic process","synonyms":[{"name":"methane breakdown","type":"exact"},{"name":"methane catabolism","type":"exact"},{"name":"methane degradation","type":"exact"}],"termid":"GO:0046188"}


id: PBO:0082393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of C-terminal domain kinase I (CTDK-I); which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082393"}


id: PBO:0027040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_mitotically_up-regulated_genes","termid":"PBO:0027040"}


id: PBO:0053125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand dependent nuclear receptor corepressor like","termid":"PBO:0053125"}


id: PBO:0045528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 1","termid":"PBO:0045528"}


id: FYECO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which margaric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ margaric acid","termid":"FYECO:0000046"}


id: PBO:0052734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 26","termid":"PBO:0052734"}


id: GO:0034778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA = 4-isopropenyl-2-ketocyclohexane-1-carboxyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA dehydrogenase activity","termid":"GO:0034778"}


id: GO:0031068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylation at centromere (obsolete GO:0031068)","synonyms":[{"name":"activation of histone deacetylation at centromere","type":"narrow"},{"name":"stimulation of histone deacetylation at centromere","type":"narrow"},{"name":"up regulation of histone deacetylation at centromere","type":"exact"},{"name":"up-regulation of histone deacetylation at centromere","type":"exact"},{"name":"upregulation of histone deacetylation at centromere","type":"exact"}],"termid":"GO:0031068"}


id: PBO:0081952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNRF3 intronic transcript 1","termid":"PBO:0081952"}


id: GO:0061038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the uterus are generated and organized.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"uterus development","termid":"GO:0060065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterus morphogenesis","termid":"GO:0061038"}


id: PBO:0029408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_conjugation_with_h-_cells","termid":"PBO:0029408"}


id: PBO:0030218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity","termid":"PBO:0030218"}


id: PBO:0045926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF containing fibulin extracellular matrix protein 2","termid":"PBO:0045926"}


id: PBO:0055670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lines homolog 1","termid":"PBO:0055670"}


id: PBO:0062947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 5","termid":"PBO:0062947"}


id: GO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of the alpha carbon of an encoded N-terminal amino acid, to form pyruvic acid retaining an amide bond between its 1-carboxyl group and the adjacent residue. The pyruvate 2-oxo group may become an enzyme active site, or it may be reduced to an alcohol.","definition_xrefs":["RESID:AA0127","RESID:AA0128","RESID:AA0129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein deamination","termid":"GO:0018277"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}


id: PBO:0057005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 99a","termid":"PBO:0057005"}


id: PBO:0087254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits the mitotic exit network (MEN) when the spindle position checkpoint is activated; localized asymmetrically to mother cell cortex, spindle pole body and bud neck; KIN4 has a paralog, FRK1, that arose from the whole genome duplication","termid":"PBO:0087254"}


id: PBO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Arrest Deficient","termid":"PBO:0003555"}


id: GO:0033351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-apiose, uridinediphosphoapiose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-D-apiose metabolic process","synonyms":[{"name":"UDP-D-apiose metabolism","type":"exact"}],"termid":"GO:0033351"}


id: FYPO:0001905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number, structure, and orientation of microtubules in the mitotic spindle are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle microtubules","synonyms":[{"name":"normal mitotic spindle microtubules during vegetative growth","type":"exact"},{"name":"normal spindle microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001905"}


id: FYPO:0005363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle kinetochore microtubule depolymerization, occurs to a lesser extent than normal during mitotic chromosome recapture.","definition_xrefs":["PMID:18256284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic spindle microtubule depolymerization","termid":"FYPO:0004650"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000337","FYPO:0000002","FYPO:0000138","FYPO:0000054","FYPO:0000641","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased kinetochore microtubule catastrophe during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased kinetochore microtubule depolymerisation during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased kinetochore microtubule shrinkage during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during kinetochore retrieval","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to SPB","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during sister kinetochore recapture","type":"exact"},{"name":"reduced kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0005363"}


id: GO:1903761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:BHF","GO_REF:0000059","GOC:TermGenie","PMID:18337493","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","termid":"GO:1903760"},{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"},{"relation_name":"is_a","term_name":"negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential","termid":"GO:1905025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","synonyms":[{"name":"down regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"down regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"down regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"down-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"down-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"downregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"downregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"inhibition of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903761"}


id: PBO:0052704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 5","termid":"PBO:0052704"}


id: PBO:0089317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body associated protein Pby1","termid":"PBO:0089317"}


id: PBO:0001719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulator protein Rif1","termid":"PBO:0001719"}


id: FYPO:0005872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the septum is in two asymmetrically located parts and does not completely bisect the cell. Arises when septum assembly begins at two sites which are not on opposite sides of the medial cortex and terminates prematurely on both sides.","definition_xrefs":["PomBase:mah","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0000002"],"is_obsolete":false,"name":"incomplete septum formed from asymmetrically located sites","synonyms":[{"name":"abnormal septum site selection from asymmetrically located sites, forming incomplete septum","type":"related"},{"name":"incomplete division septum formed from asymmetrically located sites","type":"exact"},{"name":"incomplete septum formed from asymmetrically located sites during mitotic cell cycle","type":"related"},{"name":"incomplete septum formed from asymmetrically located sites during vegetative growth","type":"exact"}],"termid":"FYPO:0005872"}


id: GO:0035667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like 4 receptor where the TRIF adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:20511708","PMID:18641322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRIF-dependent toll-like receptor signaling pathway","termid":"GO:0035666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRIF-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRIF-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRIF-dependent toll-like receptor 4 signalling pathway","type":"exact"},{"name":"Toll/IL-1 receptor (TIR) domain-containing adaptor-dependent TLR4 signaling pathway","type":"exact"}],"termid":"GO:0035667"}


id: GO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an AV node cell to an bundle of His cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"AV node cell-bundle of His cell adhesion involved in cell communication","synonyms":[{"name":"atrioventricular node cell-bundle of His cell adhesion involved in cell communication","type":"exact"}],"termid":"GO:0086072"}


id: PBO:0028754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactomannan_absent_from_cell_wall","termid":"PBO:0028754"}


id: GO:0042423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"},{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catecholamine biosynthetic process","secondary_identifiers":["Wikipedia:Catecholamines"],"synonyms":[{"name":"catecholamine anabolism","type":"exact"},{"name":"catecholamine biosynthesis","type":"exact"},{"name":"catecholamine formation","type":"exact"},{"name":"catecholamine synthesis","type":"exact"}],"termid":"GO:0042423"}


id: GO:0048793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephros over time, from its formation to the mature structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["XAO:00002000","ZFA:0000151","GOC:bf","PMID:10535314","PMID:15968585","PMID:18322540","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros development","synonyms":[{"name":"pronephric kidney development","type":"exact"}],"termid":"GO:0048793"}


id: GO:0048512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:go_curators","GOC:pr","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic behavior","termid":"GO:0007622"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian behavior","synonyms":[{"name":"circadian rhythm behavior","type":"exact"}],"termid":"GO:0048512"}


id: GO:1900624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte aggregation","synonyms":[{"name":"down regulation of monocyte aggregation","type":"exact"},{"name":"down regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"down-regulation of monocyte aggregation","type":"exact"},{"name":"down-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"downregulation of monocyte aggregation","type":"exact"},{"name":"downregulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"inhibition of monocyte aggregation","type":"narrow"},{"name":"inhibition of mononuclear phagocyte aggregation","type":"exact"},{"name":"negative regulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900624"}


id: FYPO:0003390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the medial cortex is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to medial cortex during vegetative growth","synonyms":[{"name":"ectopic protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalised to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to medial cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003390"}


id: GO:0008405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-11,12-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:10681399","RHEA:51480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonic acid 11,12-epoxygenase activity","synonyms":[{"name":"cytochrome P450 CYP2C38","type":"narrow"}],"termid":"GO:0008405"}


id: GO:0102303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + trans-resveratrol = 2 S-adenosyl-L-homocysteine + pterostilbene + 2 H+.","definition_xrefs":["GOC:pz","EC:2.1.1.240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"resveratrol 3,5-O-dimethyltransferase activity","secondary_identifiers":["RHEA:32103","MetaCyc:RXN-12805"],"termid":"GO:0102303"}


id: GO:0006354
data:
  {"annotated_genes":["SJAG_04933","SJAG_01149","SJAG_03006","SJAG_04561","SJAG_02238","SJAG_01698","SJAG_02873","SJAG_02097","SJAG_03481","SJAG_04202","SJAG_01151","SJAG_03118","SJAG_01948","SJAG_02871","SJAG_02393","SJAG_00320","SJAG_02319","SJAG_00913","SJAG_04261","SJAG_03967","SJAG_01707","SJAG_01765","SJAG_00139","SJAG_00483","SJAG_01610","SJAG_04353","SJAG_02209","SJAG_03128","SJAG_02416","SJAG_01444","SJAG_00925","SJAG_02691","SJAG_00540","SJAG_02070","SJAG_03144","SJAG_04257","SJAG_00914","SJAG_04038","SJAG_02698","SJAG_01562","SJAG_01128","SJAG_02653","SJAG_03061","SJAG_03956","SJAG_02057","SJAG_00119","SJAG_03944","SJAG_00150","SJAG_04670","SJAG_02314","SJAG_01313","SJAG_02551","SJAG_03211","SJAG_03578","SJAG_00731","SJAG_00293","SJAG_02101","SJAG_01213","SJAG_04106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77757],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001193"},{"annotations":[113051],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0034244"},{"annotations":[70625,78436],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032786"},{"annotations":[112159,71176,71655,77139,101452,104381,110499],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032968"},{"annotations":[109051,76747,87692,90815,98145,101203,89545,108759,105991,100298,109452,110714,85298,105112,86106,98785,108391,108760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006362"},{"annotations":[95441,109629,90816,102215,100916,88284,108439,111503,94691,87638,89585,103265,106764,101573,109310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006368"},{"annotations":[104135,91085,113923,104129,111404,85798,88029,106557,86921,108851,112069,99008,108065,89030,90235,109774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at a DNA-dependent RNA polymerase promoter by the addition of ribonucleotides catalyzed by an RNA polymerase.","definition_xrefs":["GOC:txnOH","GOC:mah","PMID:15020047","PMID:18280161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00483":null,"SJAG_00540":null,"SJAG_00731":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01128":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01610":null,"SJAG_01698":null,"SJAG_01707":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02057":null,"SJAG_02070":null,"SJAG_02097":null,"SJAG_02101":null,"SJAG_02209":null,"SJAG_02238":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02393":null,"SJAG_02416":null,"SJAG_02551":null,"SJAG_02653":null,"SJAG_02691":null,"SJAG_02698":null,"SJAG_02871":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03144":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_03578":null,"SJAG_03944":null,"SJAG_03956":null,"SJAG_03967":null,"SJAG_04038":null,"SJAG_04106":null,"SJAG_04202":null,"SJAG_04257":null,"SJAG_04261":null,"SJAG_04353":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"DNA-templated transcription elongation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0001124"],"synonyms":[{"name":"DNA-dependent transcription, elongation","type":"exact"},{"name":"DNA-templated transcription, elongation","type":"exact"},{"name":"RNA elongation","type":"broad"},{"name":"RNA elongation from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcription elongation from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcription elongation, DNA-dependent","type":"exact"},{"name":"transcriptional elongation, DNA-dependent","type":"exact"}],"termid":"GO:0006354","terms_by_termid":{"GO:0001193":null,"GO:0006362":null,"GO:0006368":null,"GO:0032786":null,"GO:0032968":null,"GO:0034244":null,"GO:0140673":null}}


id: GO:0046787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring viral DNA after damage or errors in replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"part_of","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"viral DNA repair","termid":"GO:0046787"}


id: PBO:0079425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 8","termid":"PBO:0079425"}


id: GO:0019306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-D-rhamnose metabolic process","termid":"GO:0046382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GDP-D-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:GDPRHAMSYN-PWY"],"synonyms":[{"name":"GDP-D-rhamnose anabolism","type":"exact"},{"name":"GDP-D-rhamnose biosynthesis","type":"exact"},{"name":"GDP-D-rhamnose formation","type":"exact"},{"name":"GDP-D-rhamnose synthesis","type":"exact"}],"termid":"GO:0019306"}


id: PBO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-39","termid":"PBO:0075028"}


id: GO:0038122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 5 (CCL5) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C motif chemokine 5 receptor activity","synonyms":[{"name":"CCL5 receptor activity","type":"exact"},{"name":"RANTES receptor activity","type":"exact"},{"name":"small inducible cytokine A5 receptor activity","type":"exact"}],"termid":"GO:0038122"}


id: GO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:tb","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovulation","termid":"GO:0060278"}


id: PBO:0070953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 8","termid":"PBO:0070953"}


id: GO:0048347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of paraxial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate determination","termid":"GO:0048345"},{"relation_name":"negatively_regulates","term_name":"paraxial mesodermal cell fate determination","termid":"GO:0048344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of paraxial mesodermal cell fate determination","synonyms":[{"name":"down regulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of paraxial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048347"}


id: PBO:0005876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine, mitochondrial","termid":"PBO:0005876"}


id: PBO:0108727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleur exosome adaptor Mmi1","termid":"PBO:0108727"}


id: GO:1901659
data:
  {"annotated_genes":["SJAG_05334","SJAG_03881","SJAG_00694","SJAG_02179","SJAG_05029","SJAG_04735","SJAG_01070","SJAG_00044","SJAG_06634","SJAG_04265","SJAG_01859","SJAG_01781","SJAG_03096","SJAG_04264","SJAG_01261","SJAG_00134"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[112010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[70227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[70228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[94137,94136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[89393,89179,85510,73236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[93305,109067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[73132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[72150,74266,90321,73430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosyl compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01261":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05029":null,"SJAG_05334":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"glycosyl compound anabolism","type":"exact"},{"name":"glycosyl compound biosynthesis","type":"exact"},{"name":"glycosyl compound formation","type":"exact"},{"name":"glycosyl compound synthesis","type":"exact"}],"termid":"GO:1901659","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0031591":null,"GO:0043097":null,"GO:0043174":null,"GO:0046086":null,"GO:0046132":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0075360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX1 overlapping transcript","termid":"PBO:0075360"}


id: PBO:0086469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial porin (voltage-dependent anion channel); not required for mitochondrial membrane permeability or mitochondrial osmotic stability; POR2 has a paralog, POR1, that arose from the whole genome duplication","termid":"PBO:0086469"}


id: GO:1905091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of parkin-mediated mitophagy in response to mitochondrial depolarization.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:pad","GO_REF:0000058","PMID:26942284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of mitophagy","termid":"GO:1901526"},{"relation_name":"is_a","term_name":"regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization","termid":"GO:1905089"},{"relation_name":"positively_regulates","term_name":"parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization","termid":"GO:0061734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization","synonyms":[{"name":"activation of parkin-mediated mitophagy in response to mitochondrial depolarization","type":"narrow"},{"name":"positive regulation of PRKN-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"positive regulation of Park2-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"up regulation of parkin-mediated mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"up-regulation of parkin-mediated mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"upregulation of parkin-mediated mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:1905091"}


id: GO:0018065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a cofactor to a protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-cofactor linkage (obsolete GO:0018065)","termid":"GO:0018065"}


id: GO:0016638
data:
  {"annotated_genes":["SJAG_03861","SJAG_04054","SJAG_03290","SJAG_01881","SJAG_03641","SJAG_02496","SJAG_03266","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[72592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"},{"annotations":[72068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"},{"annotations":[83237,108286,73680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004375"},{"annotations":[107111,75066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null,"SJAG_03266":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:1.4.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016638","terms_by_termid":{"GO:0003884":null,"GO:0004354":null,"GO:0004375":null,"GO:0004733":null,"GO:0016040":null}}


id: GO:0033278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the midbrain.","definition_xrefs":["GO_REF:0000021","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in midbrain","synonyms":[{"name":"cell proliferation in mesencephalon","type":"exact"},{"name":"mesencepahalic cell proliferation","type":"related"}],"termid":"GO:0033278"}


id: PBO:0069977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1272, pseudogene","termid":"PBO:0069977"}


id: GO:0102799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a glucosinolate = alpha-D-glucose + a thiohydroximate-O-sulfate. Glucosinolates are a subclass of thioglucosides.","definition_xrefs":["GOC:pz","EC:3.2.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"glucosinolate glucohydrolase activity","secondary_identifiers":["MetaCyc:RXN-8134"],"termid":"GO:0102799"}


id: PBO:0087346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingoid long-chain base kinase; responsible for synthesis of long-chain base phosphates, which function as signaling molecules, regulates synthesis of ceramide from exogenous long-chain bases, localizes to the Golgi and late endosomes; LCB4 has a paralog, LCB5, that arose from the whole genome duplication","termid":"PBO:0087346"}


id: GO:0097156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of motor neuron axons into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:lb","PMID:18403711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal fasciculation","termid":"GO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fasciculation of motor neuron axon","termid":"GO:0097156"}


id: PBO:0040047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 3","termid":"PBO:0040047"}


id: PBO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase (predicted)","termid":"PBO:0001670"}


id: GO:0032720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production.","definition_xrefs":["GOC:mah","PMID:10891884","PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor production","termid":"GO:0032680"},{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor production","secondary_identifiers":["GO:0042536","GO:1904468"],"synonyms":[{"name":"down regulation of tumor necrosis factor production","type":"exact"},{"name":"down-regulation of tumor necrosis factor production","type":"exact"},{"name":"downregulation of tumor necrosis factor production","type":"exact"},{"name":"inhibition of cachectin production","type":"narrow"},{"name":"inhibition of tumor necrosis factor production","type":"narrow"},{"name":"negative regulation TNF production","type":"exact"},{"name":"negative regulation TNF-alpha production","type":"exact"},{"name":"negative regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"negative regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"negative regulation tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032720"}


id: GO:0060006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vestibular reflex by which a response to an angular acceleration stimulus begins with an afferent nerve impulse from a receptor in the semi-circular canal and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:dph","PMID:11784757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular reflex","termid":"GO:0060005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angular vestibuloocular reflex","termid":"GO:0060006"}


id: GO:1990565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase chaperone complex required for the proper folding, maturation and stabilization of target proteins (mostly signaling protein kinases, some steroid hormone receptors), usually during or immediately after completion of translation. The highly conserved, phosphorylated CDC37-Ser13 (vertebrates) or cdc37-Ser14 (yeast) is essential for complex assembly and target protein binding. CDC37-Ser13 (Ser14) is phosphorylated by Casein kinase II (CK2), which in turn is a target of CDC37 creating a positive feedback loop. Complex binding also prevents rapid ubiquitin-dependent proteosomal degradation of target proteins.","definition_xrefs":["PMID:22939624","GOC:PARL","PMID:21855797","GOC:bhm","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"HSP90-CDC37 chaperone complex","termid":"GO:1990565"}


id: PBO:0053132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid droplet assembly factor 1","termid":"PBO:0053132"}


id: PBO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf2","termid":"PBO:0000975"}


id: GO:1990478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultrasonic stimulus.","definition_xrefs":["PMID:20950932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ultrasound","termid":"GO:1990478"}


id: GO:0060677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth in which the ureteric bud grows along its axis beginning with the growth of the primary ureteric bud and ending when the branches of the bud have elongated.","definition_xrefs":["PMID:16916378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud elongation","termid":"GO:0060677"}


id: PBO:0082860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of TRAPP complexes I, II and IV; transport protein particle (TRAPP) complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII, and IV); proposed subunit of a novel complex, TRAPPIV, that may function redundantly with TRAPPIII as a GEF that activates Ypt1 during autophagy","termid":"PBO:0082860"}


id: PR:O94392
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2H10.01 gene.","definition_xrefs":["UniProtKB:O94392","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C2H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2H10.01","synonyms":[{"name":"Spom972h-SPAC2H10.01","type":"exact"}],"termid":"PR:O94392"}


id: FYPO:0004842
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm","type":"exact"},{"name":"protein mislocalised to cytoplasm","type":"exact"}],"termid":"FYPO:0004842","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0063894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymeric immunoglobulin receptor","termid":"PBO:0063894"}


id: GO:0008436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterogeneous nuclear ribonucleoprotein (obsolete GO:0008436)","synonyms":[{"name":"heterogeneous nuclear ribonucleoprotein","type":"exact"},{"name":"hnRNP","type":"exact"}],"termid":"GO:0008436"}


id: GO:0021701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Golgi cell. Differentiation includes the processes involved in commitment of a neuroblast to a Golgi cell fate. A cerebellar Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dgh","PMID:15157725","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Golgi cell differentiation","termid":"GO:0021701"}


id: GO:0019361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolic process","termid":"GO:0046432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process","secondary_identifiers":["MetaCyc:P2-PWY"],"synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA anabolism","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthesis","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA formation","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA synthesis","type":"exact"}],"termid":"GO:0019361"}


id: PBO:0055948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 57","termid":"PBO:0055948"}


id: PBO:0056849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 1","termid":"PBO:0056849"}


id: PBO:0109051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL3 pseudogene 2","termid":"PBO:0109051"}


id: PBO:0079866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 3","termid":"PBO:0079866"}


id: GO:0051860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, either active or passive, by which an organism evades or tolerates the effects of the defense(s) or defense molecules of a symbiont organism. Symbiont defenses may be induced by the presence of the organism or may be preformed (e.g. physical barriers). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance of symbiont defenses (obsolete GO:0051860)","termid":"GO:0051860"}


id: SO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_feature with an extent of zero.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_feature","termid":"SO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction","synonyms":[{"name":"boundary","type":"exact"},{"name":"breakpoint","type":"exact"}],"termid":"SO:0000699"}


id: GO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components, including (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate and diphthioceranate, to form the DIM/DIP layer of the Actinobacterium-type cell wall.","definition_xrefs":["PMID:3149973","PMID:15653820","GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Actinobacterium-type cell wall biogenesis","termid":"GO:0071766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"DIM/DIP cell wall layer assembly","synonyms":[{"name":"DIM cell wall layer assembly","type":"exact"},{"name":"DIM/DIP cell wall layer biogenesis","type":"related"},{"name":"PDIM cell wall layer assembly","type":"exact"}],"termid":"GO:0071770"}


id: GO:0106014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the inflammatory response to wounding.","definition_xrefs":["GOC:BHF","PMID:26022821","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"regulates","term_name":"inflammatory response to wounding","termid":"GO:0090594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response to wounding","termid":"GO:0106014"}


id: GO:0048203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the trans-Golgi to the endosome.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"Golgi to endosome transport","termid":"GO:0006895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle targeting, trans-Golgi to endosome","synonyms":[{"name":"trans-Golgi to endosome targeting","type":"exact"}],"termid":"GO:0048203"}


id: GO:2000887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glucuronoarabinoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronoarabinoxylan metabolic process","termid":"GO:0010414"},{"relation_name":"is_a","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"},{"relation_name":"is_a","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"glucuronoarabinoxylan catabolic process","synonyms":[{"name":"glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000887"}


id: GO:1902140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16496115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inositol","termid":"GO:1902140"}


id: PBO:0029800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thick_actin_cables","termid":"PBO:0029800"}


id: GO:0045902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational fidelity","synonyms":[{"name":"down regulation of translational fidelity","type":"exact"},{"name":"down-regulation of translational fidelity","type":"exact"},{"name":"downregulation of translational fidelity","type":"exact"},{"name":"inhibition of translational fidelity","type":"narrow"}],"termid":"GO:0045902"}


id: PBO:0069821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1107, pseudogene","termid":"PBO:0069821"}


id: GO:0042643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The actin part of any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin, actin portion (obsolete GO:0042643)","termid":"GO:0042643"}


id: GO:0045725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen biosynthetic process","termid":"GO:0005979"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of glycogen metabolic process","termid":"GO:0070875"},{"relation_name":"positively_regulates","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"positive regulation of glycogen biosynthetic process","synonyms":[{"name":"activation of glycogen biosynthetic process","type":"narrow"},{"name":"positive regulation of glycogen anabolism","type":"exact"},{"name":"positive regulation of glycogen biosynthesis","type":"exact"},{"name":"positive regulation of glycogen formation","type":"exact"},{"name":"positive regulation of glycogen synthesis","type":"exact"},{"name":"stimulation of glycogen biosynthetic process","type":"narrow"},{"name":"up regulation of glycogen biosynthetic process","type":"exact"},{"name":"up-regulation of glycogen biosynthetic process","type":"exact"},{"name":"upregulation of glycogen biosynthetic process","type":"exact"}],"termid":"GO:0045725"}


id: PBO:0051322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR22-5 (pseudogene)","termid":"PBO:0051322"}


id: GO:0000972
data:
  {"annotated_genes":["SJAG_01374","SJAG_02757","SJAG_04379","SJAG_03986","SJAG_03299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73246,74559,75842,78854],"is_not":false,"summary":null,"term":"GO:0000972"},{"annotations":[75034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000973"}]},"cv_name":"biological_process","definition":"The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery. In S. cerevisiae, this process involves cis-acting DNA sequences such as the TATA box and upstream activating sequence (UAS) elements, trans-acting transcriptional activators, and also the 3'-UTR of the transcript.","definition_xrefs":["GOC:krc","PMID:18614049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_02757":null,"SJAG_03299":null,"SJAG_03986":null,"SJAG_04379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0000972","terms_by_termid":{"GO:0000972":null,"GO:0000973":null}}


id: SO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified base in which adenine has been methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_DNA_base_feature","termid":"SO:0000306"},{"relation_name":"is_a","term_name":"modified_adenine","termid":"SO:0001962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_adenine","synonyms":[{"name":"methylated A","type":"exact"},{"name":"methylated adenine","type":"exact"},{"name":"methylated adenine base","type":"exact"},{"name":"methylated adenine residue","type":"exact"},{"name":"methylated_A","type":"exact"}],"termid":"SO:0000161"}


id: GO:0035993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the deltoid tuberosity over time, from its formation to the mature structure. The deltoid tuberosity is the region on the shaft of the humerus to which the deltoid muscle attaches. The deltoid tuberosity develops through endochondral ossification in a two-phase process; an initiating tendon-dependent phase, and a muscle-dependent growth phase.","definition_xrefs":["Wikipedia:Deltoid_tuberosity","UBERON:0002498","PMID:17567668","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deltoid tuberosity development","termid":"GO:0035993"}


id: PBO:0046813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XIII A chain","termid":"PBO:0046813"}


id: FYPO:0006285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to telomere","termid":"FYPO:0005649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to telomere during mitotic anaphase B","synonyms":[{"name":"increased duration of protein localisation to telomere during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to telomere during anaphase B during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomere during anaphase B of mitotic cell cycle","type":"exact"},{"name":"increased duration of protein localization to telomeric region during mitotic anaphase B","type":"exact"},{"name":"prolonged protein localization to telomere during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006285"}


id: PBO:0108704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein for Arf6, Ucp3","termid":"PBO:0108704"}


id: GO:1903868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methylenetetrahydrofolate reductase (NAD(P)H) activity.","definition_xrefs":["GOC:TermGenie","PMID:24769206","GOC:rph","GOC:BHF","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","synonyms":[{"name":"regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"regulation of 5,10-methylenetetrahydrofolic acid reductase activity","type":"broad"},{"name":"regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"regulation of MTHFR activity","type":"broad"},{"name":"regulation of MetF","type":"related"},{"name":"regulation of N(5),N(10)-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"regulation of N(5,10)-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"regulation of methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"regulation of methylenetetrahydrofolic acid reductase activity","type":"broad"}],"termid":"GO:1903868"}


id: GO:0031438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA cleavage.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA cleavage (obsolete GO:0031438)","synonyms":[{"name":"down regulation of mRNA cleavage","type":"exact"},{"name":"down-regulation of mRNA cleavage","type":"exact"},{"name":"downregulation of mRNA cleavage","type":"exact"},{"name":"inhibition of mRNA cleavage","type":"narrow"}],"termid":"GO:0031438"}


id: PBO:0003511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec66 (predicted)","termid":"PBO:0003511"}


id: PBO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0000933"}


id: GO:1900533
data:
  {"annotated_genes":["SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"palmitic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900533","terms_by_termid":{"GO:1900535":null}}


id: SO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is the result of some arbitrary experimental procedure. The procedure may be carried out with biological material or inside a computer.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental_feature","synonyms":[{"name":"analysis feature","type":"related"},{"name":"experimental output artefact","type":"exact"},{"name":"experimental_output_artefact","type":"exact"}],"termid":"SO:0001410"}


id: PBO:0082543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein related to glucanases localized in birth scars; possibly involved in cell wall septation; member of the SUN family; SUN4 has a paralog, SIM1, that arose from the whole genome duplication","termid":"PBO:0082543"}


id: PBO:0062809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9","termid":"PBO:0062809"}


id: GO:0036242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the 2-oxoglutarate-dependent gamma aminobutyrate (GABA) transaminase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate decarboxylation to succinate","termid":"GO:0006540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"glutamate catabolic process to succinate via 2-oxoglutarate-dependent GABA-transaminase activity","termid":"GO:0036242"}


id: PBO:0029419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029419"}


id: MOD:01460
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino methylated residue","synonyms":[{"name":"N2MeRes","type":"exact"}],"termid":"MOD:01460"}


id: GO:0007535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines which donor locus a cell uses, in preference to another, in mating type switching.","definition_xrefs":["PMID:9928492","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"donor selection","synonyms":[{"name":"donor preference","type":"related"}],"termid":"GO:0007535"}


id: PBO:0086444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannose-ethanolamine phosphate phosphodiesterase; involved in GPI-anchor remodeling prior to the attachment of cell wall proteins to beta 1,3-glucan, removing ethanolamine phosphate from the first mannose of GPI anchors; mutants display elevated Ca2+-dependent signaling resulting in secondary actin polarization and Golgi inheritance defects; enzyme is Mn2+-dependent; mutants have cell division cycle defect and fragile cell walls","termid":"PBO:0086444"}


id: GO:0021756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the striatum over time from its initial formation until its mature state. The striatum is a region of the forebrain consisting of the caudate nucleus, putamen and fundus striati.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","ISBN:0878937420","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striatum development","synonyms":[{"name":"neostriatum development","type":"exact"},{"name":"striate nucleus development","type":"exact"}],"termid":"GO:0021756"}


id: PBO:0066509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX5 antisense RNA 1","termid":"PBO:0066509"}


id: PBO:0061512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 2","termid":"PBO:0061512"}


id: PBO:0082086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes; PRS2 has a paralog, PRS4, that arose from the whole genome duplication","termid":"PBO:0082086"}


id: GO:1901487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Positive regulation of transcription factor catabolism in response to increased oxygen levels, which results in negative regulation of the SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels (obsolete GO:1901487)","synonyms":[{"name":"negative regulation of SREBP signaling by acceleration of SREBP degradation, in response to increased oxygen levels","type":"narrow"},{"name":"negative regulation of SREBP signaling by positive regulation of transcription factor catabolism in response to increased oxygen levels","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by positive regulation of SREBP degradation, in response to elevated oxygen","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway in presence of oxygen by positive regulation of transcription factor catabolic process","type":"related"},{"name":"negative regulation of SREBP-mediated signaling pathway in response to increased oxygen levels by positive regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901487"}


id: PBO:0050615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 7 pseudogene 1","termid":"PBO:0050615"}


id: PBO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor TFIIS","termid":"PBO:0001345"}


id: PBO:0083159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the dubious ORF YBR056W-A","termid":"PBO:0083159"}


id: PBO:0073446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFR1 pseudogene 2","termid":"PBO:0073446"}


id: PBO:0077166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 7","termid":"PBO:0077166"}


id: FYPO:0004620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spindle disassembly is abnormal. Spindle disassembly is the controlled breakdown of the spindle.","definition_xrefs":["PomBase:mah","GO:0051230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal spindle disassembly","termid":"FYPO:0004620"}


id: PBO:0058959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKRN2 opposite strand","termid":"PBO:0058959"}


id: PBO:0038965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity dependent neuroprotector homeobox","termid":"PBO:0038965"}


id: GO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the urogenital tract.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal tolerance induction","termid":"GO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in urogenital tract","termid":"GO:0002425"}


id: PBO:0047811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box M1","termid":"PBO:0047811"}


id: PBO:0038357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_removed","termid":"PBO:0038357"}


id: PBO:0090397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Vps4","termid":"PBO:0090397"}


id: PBO:0055058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2474","termid":"PBO:0055058"}


id: PBO:0078101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 9","termid":"PBO:0078101"}


id: GO:0055042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-valerolactone + H2O = 5-hydroxyvalerate.","definition_xrefs":["GOC:mlg","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactonohydrolase activity","termid":"GO:0046573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"5-valerolactone hydrolase activity","termid":"GO:0055042"}


id: PR:P41836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03141","PANTHER:PTHR23073:SF12","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 8 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.12c","secondary_identifiers":["UniProtKB:P41836"],"synonyms":[{"name":"Spom972h-PSMC5","type":"exact"},{"name":"protein let1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41836"}


id: PBO:0066213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 6","termid":"PBO:0066213"}


id: PBO:0058966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 9, pseudogene","termid":"PBO:0058966"}


id: PBO:0089299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Poz1","termid":"PBO:0089299"}


id: PBO:0081553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 473","termid":"PBO:0081553"}


id: FYPO:0001710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is stabilized, i.e. interactions between the iron-sulfur cluster and the gene product last longer than in wild type under any given set of conditions. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"stabilized iron-sulfur cluster binding","synonyms":[{"name":"increased duration of iron-sulfur cluster binding","type":"exact"},{"name":"stabilised iron-sulfur cluster binding","type":"exact"},{"name":"stabilized iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001710"}


id: GO:0010321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vegetative phase change. Vegetative phase change is the set of post-embryonic processes involved in the transition of a plant from a juvenile phase of vegetative development to an adult phase of vegetative development.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"vegetative phase change","termid":"GO:0010050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vegetative phase change","termid":"GO:0010321"}


id: GO:1902776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-sulfoquinovose(1-).","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:24463506","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) metabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) metabolism","type":"exact"}],"termid":"GO:1902776"}


id: PBO:0074850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38C","termid":"PBO:0074850"}


id: PBO:0087206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; methylates translational release factor Mrf1p; similar to E.coli PrmC; is not an essential gene","termid":"PBO:0087206"}


id: PR:O59743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C530.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.07c","synonyms":[{"name":"Spom972h-SPBC530.07c","type":"exact"}],"termid":"PR:O59743"}


id: PBO:0064134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 1","termid":"PBO:0064134"}


id: PBO:0017865
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli fbp","termid":"PBO:0017865"}


id: GO:1905169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagosome","type":"exact"},{"name":"regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905169"}


id: PBO:0041440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf72-SMCR8 complex subunit","termid":"PBO:0041440"}


id: GO:0009688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"abscisic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-695"],"synonyms":[{"name":"abscisic acid anabolism","type":"exact"},{"name":"abscisic acid biosynthesis","type":"exact"},{"name":"abscisic acid formation","type":"exact"},{"name":"abscisic acid synthesis","type":"exact"}],"termid":"GO:0009688"}


id: PBO:0004998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein (predicted)","termid":"PBO:0004998"}


id: GO:2000837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androstenedione secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"androstenedione secretion","termid":"GO:0035941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of androstenedione secretion","synonyms":[{"name":"regulation of androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:2000837"}


id: GO:0070799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of conidiophore stalk development","termid":"GO:0070799"}


id: GO:0075246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"is_a","term_name":"regulation of oospore formation","termid":"GO:0075244"},{"relation_name":"negatively_regulates","term_name":"oospore formation","termid":"GO:0075243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of oospore formation","termid":"GO:0075246"}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: GO:0035688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The passage of a T-helper 1 cell between the tight junctions of endothelial cells lining blood vessels, typically the fourth and final step of cellular extravasation. A T-helper 1 cell is a CD4-positive, alpha-beta T cell that has the phenotype T-bet-positive and produces interferon-gamma.","definition_xrefs":["GOC:BHF","PMID:10477596","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helper T cell diapedesis","termid":"GO:0035685"},{"relation_name":"part_of","term_name":"T-helper 1 cell extravasation","termid":"GO:0035687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell diapedesis","synonyms":[{"name":"Th1 cell diapedesis","type":"exact"}],"termid":"GO:0035688"}


id: PBO:0058892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11399","termid":"PBO:0058892"}


id: GO:0046970
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76360],"is_not":false,"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["GOC:vw","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H4K16 deacetylase activity","termid":"GO:0034739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0033558","GO:0016787","GO:0003824","GO:0140096","GO:0019213"],"is_obsolete":false,"name":"NAD-dependent histone H4K16 deacetylase activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"NAD-dependent histone H4-K16 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046970","terms_by_termid":{"GO:0046970":null}}


id: GO:0036380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-alpha-D-glucosamine + ditrans,octacis-undecaprenyl phosphate = UMP + N-acetyl-alpha-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol.","definition_xrefs":["EC:2.7.8.33","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity","secondary_identifiers":["RHEA:28090","KEGG_REACTION:R08856","MetaCyc:GLCNACPTRANS-RXN"],"synonyms":[{"name":"GlcNAc-P-P-Und synthase activity","type":"related"},{"name":"UDP-GIcNAc:undecaprenyl phosphate N-acetylglucosaminyl 1-P transferase activity","type":"related"},{"name":"UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:ditrans,octacis-undecaprenyl phosphate N-acetyl-D-glucosaminephosphotransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine:undecaprenyl-phosphate GlcNAc-1-phosphate transferase activity","type":"related"}],"termid":"GO:0036380"}


id: MOD:01140
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two iodine atoms.","definition_xrefs":["DeltaMass:0","OMSSA:35","Unimod:130#Y","PubMed:15627961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diiodinated residue","termid":"MOD:00501"},{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diiodinated tyrosine","synonyms":[{"name":"3,5-Diiodination (of Tyrosine)","type":"exact"},{"name":"Diiodo","type":"related"},{"name":"I2Tyr","type":"exact"},{"name":"di-Iodination","type":"related"},{"name":"diiodinationy","type":"exact"}],"termid":"MOD:01140"}


id: PBO:0085204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer membrane component of the mitochondrial fusion machinery; binds to Fzo1p and Mgm1p to link these two GTPases during mitochondrial fusion; involved in fusion of both the outer and inner membranes; facilitates dimerization of Fzo1p during fusion; import into the outer membrane is mediated by Tom70p and Mim1p; has similarity to carrier proteins but likely not a transporter; similar to human SLC25A46 implicated in optic atroprophy spectrum disorder and Leigh syndrome","termid":"PBO:0085204"}


id: PBO:0058852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8081","termid":"PBO:0058852"}


id: PBO:0084454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Sur1p; CSH1 has a paralog, SUR1, that arose from the whole genome duplication","termid":"PBO:0084454"}


id: PBO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline phosphotransferase 1","termid":"PBO:0043057"}


id: GO:0018644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:  toluene + H+ + NADH + O2 = 2-hydroxytoluene + H2O + NAD+.","definition_xrefs":["RHEA:20349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"toluene 2-monooxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0222","EC:1.14.13.243","MetaCyc:TOLUENE-2-MONOOXYGENASE-RXN"],"termid":"GO:0018644"}


id: PR:Q92380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4E9.01c","synonyms":[{"name":"Spom972h-rec11","type":"exact"}],"termid":"PR:Q92380"}


id: SO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_binding_site","termid":"SO:0000410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_to_protein_binding_site","synonyms":[{"name":"nucleotide to protein binding site","type":"related"}],"termid":"SO:0001654"}


id: PBO:0055486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2919","termid":"PBO:0055486"}


id: PBO:0044321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 1","termid":"PBO:0044321"}


id: GO:0006048
data:
  {"annotated_genes":["SJAG_00978","SJAG_03723","SJAG_00519","SJAG_01443","SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70843,71045,72159,75891,98250],"is_not":false,"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-N-acetylglucosamine metabolic process","termid":"GO:0006047"},{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_03723":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:UDPNAGSYN-PWY"],"synonyms":[{"name":"UDP-GlcNAc biosynthesis","type":"exact"},{"name":"UDP-GlcNAc biosynthetic process","type":"exact"},{"name":"UDP-N-acetylglucosamine anabolism","type":"exact"},{"name":"UDP-N-acetylglucosamine biosynthesis","type":"exact"},{"name":"UDP-N-acetylglucosamine formation","type":"exact"},{"name":"UDP-N-acetylglucosamine synthesis","type":"exact"}],"termid":"GO:0006048","terms_by_termid":{"GO:0006048":null}}


id: GO:0007619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism for the purpose of attracting sexual partners.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"courtship behavior","synonyms":[{"name":"courtship behaviour","type":"exact"}],"termid":"GO:0007619"}


id: PBO:0074735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 93","termid":"PBO:0074735"}


id: PBO:0088054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein of the SUMO family; conjugated to lysine residues of target proteins; associates with transcriptionally active genes; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; human homolog SUMO1 can complement yeast null mutant","termid":"PBO:0088054"}


id: PBO:0043166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class II major histocompatibility complex transactivator","termid":"PBO:0043166"}


id: GO:1900076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"}


id: PBO:0044733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 1","termid":"PBO:0044733"}


id: PBO:0011152
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ichthyosis","termid":"PBO:0011152"}


id: PBO:0053204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 3","termid":"PBO:0053204"}


id: GO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of heme biosynthetic process","synonyms":[{"name":"down regulation of heme biosynthetic process","type":"exact"},{"name":"down-regulation of heme biosynthetic process","type":"exact"},{"name":"downregulation of heme biosynthetic process","type":"exact"},{"name":"inhibition of heme biosynthetic process","type":"narrow"},{"name":"negative regulation of haem biosynthetic process","type":"exact"},{"name":"negative regulation of heme anabolism","type":"exact"},{"name":"negative regulation of heme biosynthesis","type":"exact"},{"name":"negative regulation of heme formation","type":"exact"},{"name":"negative regulation of heme synthesis","type":"exact"}],"termid":"GO:0070454"}


id: GO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B2 bradykinin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"B2 bradykinin receptor binding","synonyms":[{"name":"B2 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031713"}


id: PBO:0039445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKHD1-EIF4EBP3 readthrough","termid":"PBO:0039445"}


id: PBO:0004682
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae Spt4","termid":"PBO:0004682"}


id: GO:0019062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.","definition_xrefs":["GOC:jl","UniProtKB-KW:KW-1161","VZ:956","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion attachment to host cell","synonyms":[{"name":"viral absorption","type":"exact"},{"name":"viral attachment to host cell","type":"related"},{"name":"virion attachment to host cell surface receptor","type":"narrow"}],"termid":"GO:0019062"}


id: GO:0070285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pigment cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell development","termid":"GO:0070285"}


id: FYPO:0000316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore germinates but fails to produce dividing cells that can survive under normal conditions.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination","synonyms":[{"name":"inviable germinated spore","type":"exact"},{"name":"inviable germinating spore","type":"related"},{"name":"lethal after spore germination","type":"exact"}],"termid":"FYPO:0000316"}


id: PBO:0066906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 207","termid":"PBO:0066906"}


id: GO:0061546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a tyramine by a cell in which the tyramine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amine secretion, neurotransmission","termid":"GO:0061532"},{"relation_name":"is_a","term_name":"tyramine secretion","termid":"GO:0061545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tyramine secretion, neurotransmission","termid":"GO:0061546"}


id: PBO:0050325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 27","termid":"PBO:0050325"}


id: FYPO:0005696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the interphase microtubule organizing center does not occur. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cytoplasmic interphase microtubule nucleation","termid":"FYPO:0004766"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation from iMTOC","synonyms":[{"name":"abolished cytoplasmic interphase microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation from iMTOC during mitotic interphase","type":"exact"},{"name":"abolished interphase cytoplasmic microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing centre","type":"exact"},{"name":"cytoplasmic microtubule nucleation from iMTOC abolished","type":"exact"}],"termid":"FYPO:0005696"}


id: GO:0030153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates resistance to a bacteriocin: any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"bacteriocin immunity","termid":"GO:0030153"}


id: PBO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase Pho4","termid":"PBO:0003191"}


id: PBO:0055136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2555","termid":"PBO:0055136"}


id: PBO:0055235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2662","termid":"PBO:0055235"}


id: RO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Candidate definition: x directly_develops from y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p, and a substantial portion of the matter of y comes from x, and the start of x is coincident with or after the end of y","direct_ancestors":[{"relation_name":"is_a","term_name":"develops_from","termid":"RO:0002202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_develops_from","termid":"RO:0002207"}


id: PATO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000854 contact righting reflex value (obsolete PATO:0000854)","termid":"PATO:0000854"}


id: PBO:0081891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 841","termid":"PBO:0081891"}


id: RO:HOM0000006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by similarity with regard to selected structural parameters.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_structural_homology_relationship_with","synonyms":[{"name":"idealistic homology","type":"related"},{"name":"structural homologous to","type":"exact"}],"termid":"RO:HOM0000006"}


id: PBO:0057358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ab","termid":"PBO:0057358"}


id: PBO:0039788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor","termid":"PBO:0039788"}


id: GO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"positively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070760"}


id: PBO:0078999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 6-1","termid":"PBO:0078999"}


id: PBO:0078203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-5","termid":"PBO:0078203"}


id: GO:0048800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the antenna are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"eye-antennal disc morphogenesis","termid":"GO:0007455"},{"relation_name":"part_of","term_name":"antennal development","termid":"GO:0007469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal morphogenesis","termid":"GO:0048800"}


id: PBO:0081821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 738","termid":"PBO:0081821"}


id: PBO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic leucine-tRNA ligase Lrs1 (predicted)","termid":"PBO:0002866"}


id: PBO:0075245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 15","termid":"PBO:0075245"}


id: GO:1990500
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that causes translational repression in Drosophila. Prevents assembly of ribosomes at the mRNA by interfacing with a sequence-specific RNA-binding protein leading to recruitment of the CCR4 complex and consequently, reduction of the mRNA's poly(A) tail length. The complex is also required for dorso-ventral pattern formation in the embryo.","definition_xrefs":["GOC:bhm","PMID:14723848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor complex","termid":"GO:1903502"},{"relation_name":"part_of","term_name":"P-body","termid":"GO:0000932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0000932"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0000932"],"is_obsolete":false,"name":"eif4e-cup complex","synonyms":[{"name":"eukaryotic translation initiation factor 4E-cup complex","type":"exact"}],"termid":"GO:1990500"}


id: PBO:0010232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain containing protein required for Sre1 cleavage","termid":"PBO:0010232"}


id: PBO:0060469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase","termid":"PBO:0060469"}


id: GO:0004842
data:
  {"annotated_genes":["SJAG_00341","SJAG_02169","SJAG_03191","SJAG_04309","SJAG_01535","SJAG_03831","SJAG_02347","SJAG_05323","SJAG_02299","SJAG_00561","SJAG_00209","SJAG_04573","SJAG_03006","SJAG_03613","SJAG_04990","SJAG_03968","SJAG_05022","SJAG_02851","SJAG_03860","SJAG_01360","SJAG_00208","SJAG_01679","SJAG_00300","SJAG_02918","SJAG_02746","SJAG_01593","SJAG_05274","SJAG_00435","SJAG_03324","SJAG_01165","SJAG_03112","SJAG_01507","SJAG_02668","SJAG_01637","SJAG_04612","SJAG_03883","SJAG_00819","SJAG_01992","SJAG_00552","SJAG_04783","SJAG_03175","SJAG_02521","SJAG_04966","SJAG_03005","SJAG_01212","SJAG_00855","SJAG_03657","SJAG_04600","SJAG_02319","SJAG_02575","SJAG_04915","SJAG_02371","SJAG_02685","SJAG_03618","SJAG_03970","SJAG_01772","SJAG_00931","SJAG_05340","SJAG_04857","SJAG_04619","SJAG_01253","SJAG_03615","SJAG_04429","SJAG_01900","SJAG_00173","SJAG_05236","SJAG_00293","SJAG_02308","SJAG_00500","SJAG_00188","SJAG_01854","SJAG_05264","SJAG_01533","SJAG_00111","SJAG_04151","SJAG_00509","SJAG_00475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111405,113924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[89978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[83960,83808,101854,83602,77077,103542,97591,97738,108242,109508,71494,111958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"},{"annotations":[104979,108645,107366,75626,86440,85455,73660,76338,71884,99806,72103,77616,100651,102346,85092,105552,109562,71351,113531,90997,109509,83809,100372,89211,92371,103247,78033,103375,111878,111877,77264,85525,98480,73839,85938,96811,108077,74911,112388,74802,76667,84412,92291,97356,85288,94093,95764,83819,96690,105296,98854,104231,78612,75786,72929,100707,71962,94929,110604,112348,84101,74785,73820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[74212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y = Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.","definition_xrefs":["GOC:BioGRID","GOC:jh2","PMID:9635407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00173":null,"SJAG_00188":null,"SJAG_00208":null,"SJAG_00209":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00341":null,"SJAG_00435":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00509":null,"SJAG_00552":null,"SJAG_00561":null,"SJAG_00819":null,"SJAG_00855":null,"SJAG_00931":null,"SJAG_01165":null,"SJAG_01212":null,"SJAG_01253":null,"SJAG_01360":null,"SJAG_01507":null,"SJAG_01533":null,"SJAG_01535":null,"SJAG_01593":null,"SJAG_01637":null,"SJAG_01679":null,"SJAG_01772":null,"SJAG_01854":null,"SJAG_01900":null,"SJAG_01992":null,"SJAG_02169":null,"SJAG_02299":null,"SJAG_02308":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02371":null,"SJAG_02521":null,"SJAG_02575":null,"SJAG_02668":null,"SJAG_02685":null,"SJAG_02746":null,"SJAG_02851":null,"SJAG_02918":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03112":null,"SJAG_03175":null,"SJAG_03191":null,"SJAG_03324":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03657":null,"SJAG_03831":null,"SJAG_03860":null,"SJAG_03883":null,"SJAG_03968":null,"SJAG_03970":null,"SJAG_04151":null,"SJAG_04309":null,"SJAG_04429":null,"SJAG_04573":null,"SJAG_04600":null,"SJAG_04612":null,"SJAG_04619":null,"SJAG_04783":null,"SJAG_04857":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04990":null,"SJAG_05022":null,"SJAG_05236":null,"SJAG_05264":null,"SJAG_05274":null,"SJAG_05323":null,"SJAG_05340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016746","GO:0019787","GO:0016740"],"is_obsolete":false,"name":"ubiquitin-protein transferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-183089","Reactome:R-HSA-1169398","Reactome:R-HSA-202534","Reactome:R-HSA-5660753","Reactome:R-HSA-936412","Reactome:R-HSA-983156","Reactome:R-HSA-975147","Reactome:R-HSA-1169402","Reactome:R-HSA-69598","Reactome:R-HSA-9014342","GO:0004841","Reactome:R-HSA-183051","Reactome:R-HSA-9793485","GO:0004840","Reactome:R-HSA-5610746","Reactome:R-HSA-3134804","Reactome:R-HSA-936942","Reactome:R-HSA-9833973","Reactome:R-HSA-5607757","Reactome:R-HSA-1363331","Reactome:R-HSA-1253282","Reactome:R-HSA-3134946","Reactome:R-HSA-5362412","Reactome:R-HSA-182986","Reactome:R-HSA-180597","Reactome:R-HSA-264444","Reactome:R-HSA-5667111","Reactome:R-HSA-5667107","Reactome:R-HSA-5675470","Reactome:R-HSA-9013974","Reactome:R-HSA-9758604","Reactome:R-HSA-174227","Reactome:R-HSA-174057","Reactome:R-HSA-5655170","Reactome:R-HSA-5652009","Reactome:R-HSA-5691108","Reactome:R-HSA-9793444","Reactome:R-HSA-1234172","Reactome:R-HSA-2900765","Reactome:R-HSA-5607725","Reactome:R-HSA-9817362","Reactome:R-HSA-5483238","Reactome:R-HSA-1912357","Reactome:R-HSA-5205682","Reactome:R-HSA-187575","Reactome:R-HSA-201425","Reactome:R-HSA-3788724","Reactome:R-HSA-2169050","Reactome:R-HSA-1977296","Reactome:R-HSA-75824","Reactome:R-HSA-202453","Reactome:R-HSA-9701000","Reactome:R-HSA-180540","Reactome:R-HSA-983153","Reactome:R-HSA-179417","Reactome:R-HSA-870449","Reactome:R-HSA-1234163","Reactome:R-HSA-1169397","Reactome:R-HSA-68712","Reactome:R-HSA-400267","Reactome:R-HSA-2682349","Reactome:R-HSA-975118","Reactome:R-HSA-173545","Reactome:R-HSA-9750946","Reactome:R-HSA-9645414","Reactome:R-HSA-5610745","Reactome:R-HSA-2213017","Reactome:R-HSA-446877","Reactome:R-HSA-9793679","Reactome:R-HSA-1358790","Reactome:R-HSA-5357757","Reactome:R-HSA-3000335","Reactome:R-HSA-9796626","Reactome:R-HSA-9645394","Reactome:R-HSA-174159","Reactome:R-HSA-1918092","Reactome:R-HSA-451418","Reactome:R-HSA-5607756","Reactome:R-HSA-8948709","Reactome:R-HSA-9833155","Reactome:R-HSA-1358789","Reactome:R-HSA-1918095","Reactome:R-HSA-209063","Reactome:R-HSA-3797226","Reactome:R-HSA-1980118","Reactome:R-HSA-5684250","Reactome:R-HSA-1980074","Reactome:R-HSA-2737728","Reactome:R-HSA-2769007","Reactome:R-HSA-3780995","Reactome:R-HSA-211734","Reactome:R-HSA-2187368","Reactome:R-HSA-936986","Reactome:R-HSA-9688831","Reactome:R-HSA-9815507","Reactome:R-HSA-3781009","Reactome:R-HSA-5693108","Reactome:R-HSA-4332236","Reactome:R-HSA-205118","Reactome:R-HSA-9628444","Reactome:R-HSA-9796346","Reactome:R-HSA-182993","Reactome:R-HSA-3249386","Reactome:R-HSA-5668454","Reactome:R-HSA-9796387","KEGG_REACTION:R03876","Reactome:R-HSA-1912386","Reactome:R-HSA-174195","Reactome:R-HSA-1169394","Reactome:R-HSA-983140","Reactome:R-HSA-2172172","Reactome:R-HSA-1169406","Reactome:R-HSA-2730904","Reactome:R-HSA-2179276","Reactome:R-HSA-1358792","Reactome:R-HSA-174104","Reactome:R-HSA-5607728","Reactome:R-HSA-918224","Reactome:R-HSA-8956106","Reactome:R-HSA-9013069","Reactome:R-HSA-1852623","Reactome:R-HSA-2186785","Reactome:R-HSA-5610742","Reactome:R-HSA-174144","Reactome:R-HSA-5668534","Reactome:R-HSA-168915","Reactome:R-HSA-741386","Reactome:R-HSA-450358","Reactome:R-HSA-2186747","Reactome:R-HSA-1169395","Reactome:R-HSA-1169405","Reactome:R-HSA-173542","Reactome:R-HSA-183084"],"synonyms":[{"name":"E2","type":"broad"},{"name":"E3","type":"broad"},{"name":"ubiquitin conjugating enzyme activity","type":"narrow"},{"name":"ubiquitin ligase activity","type":"narrow"},{"name":"ubiquitin protein ligase activity","type":"narrow"},{"name":"ubiquitin protein-ligase activity","type":"narrow"},{"name":"ubiquitin-conjugating enzyme activity","type":"narrow"}],"termid":"GO:0004842","terms_by_termid":{"GO:0034450":null,"GO:0061630":null,"GO:0061631":null,"GO:0140850":null,"GO:0140851":null}}


id: PBO:0063598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 gamma","termid":"PBO:0063598"}


id: PBO:0012296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in transcription (predicted)","termid":"PBO:0012296"}


id: PBO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf3","termid":"PBO:0004698"}


id: PBO:0083576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps YDR134C","termid":"PBO:0083576"}


id: PBO:0056802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1","termid":"PBO:0056802"}


id: SO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that has been produced as the product of a reverse transcriptase mediated event.","direct_ancestors":[{"relation_name":"has_quality","term_name":"retrotransposed","termid":"SO:0000569"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrogene","termid":"SO:0001219"}


id: PR:O74793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC26H8.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.11c","synonyms":[{"name":"Spom972h-SPBC26H8.11c","type":"exact"}],"termid":"PR:O74793"}


id: PBO:0061066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein","termid":"PBO:0061066"}


id: PBO:0082316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF/CREB family basic leucine zipper (bZIP) transcription factor; binds as a homodimer to the ATF/CREB consensus sequence TGACGTCA; important for carbon source utilization; target genes include GRE2 and COS8; ACA1 has a paralog, CST6, that arose from the whole genome duplication","termid":"PBO:0082316"}


id: PBO:0059864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 1","termid":"PBO:0059864"}


id: FYPO:0004376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"increased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"increased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004376"}


id: PR:000027605
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrc1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1","synonyms":[{"name":"DNA replication checkpoint mediator mrc1","type":"exact"},{"name":"mrc1","type":"exact"}],"termid":"PR:000027605"}


id: PBO:0011058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_occurs_in","termid":"PBO:0011058"}


id: GO:0030594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neurotransmitter and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotransmitter receptor activity","termid":"GO:0030594"}


id: RO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a specifically dependent continuant (the dependent) and an independent continuant (the bearer), in which the dependent specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in_part_of","termid":"RO:0002314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheres_in","termid":"RO:0000052"}


id: PBO:0051530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2 receptor subunit beta","termid":"PBO:0051530"}


id: PBO:0051961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor interacting protein","termid":"PBO:0051961"}


id: GO:0016210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2.","definition_xrefs":["EC:2.3.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"naringenin-chalcone synthase activity","secondary_identifiers":["MetaCyc:NARINGENIN-CHALCONE-SYNTHASE-RXN","RHEA:11128"],"synonyms":[{"name":"DOCS","type":"narrow"},{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"}],"termid":"GO:0016210"}


id: PBO:0015667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor C, GTPase activating protein Tbc1 (predicted)","termid":"PBO:0015667"}


id: PBO:0030482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ferrichrome_absent_from_cell","termid":"PBO:0030482"}


id: GO:2000896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an amylopectin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin metabolic process","synonyms":[{"name":"Amylopectin metabolism","type":"exact"}],"termid":"GO:2000896"}


id: PBO:0068570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 21, pseudogene","termid":"PBO:0068570"}


id: PBO:0016962
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CDA2","termid":"PBO:0016962"}


id: GO:0051102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA recombination.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligation","termid":"GO:0006266"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA ligation involved in DNA recombination","synonyms":[{"name":"DNA ligation during DNA recombination","type":"related"}],"termid":"GO:0051102"}


id: FYPO:0001530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of GTPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal GTPase activity","termid":"FYPO:0001530"}


id: PBO:0043811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPNE2 divergent transcript","termid":"PBO:0043811"}


id: PBO:0047191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 209 member A","termid":"PBO:0047191"}


id: PBO:0076782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tec protein tyrosine kinase","termid":"PBO:0076782"}


id: GO:0140907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CH + a halogen + FADH2 + O2 = R-C-halogen + FAD + H2O.","definition_xrefs":["PMID:34368824","PMID:28466644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenase activity","termid":"GO:0140906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"flavin-dependent halogenase activity","termid":"GO:0140907"}


id: PBO:0042563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 5","termid":"PBO:0042563"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: PBO:0056775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 25","termid":"PBO:0056775"}


id: PBO:0062296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 7 pseudogene","termid":"PBO:0062296"}


id: PBO:0089421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex WD repeat subunit Sop2","termid":"PBO:0089421"}


id: GO:0098990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to an AMPA-selective glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor signaling pathway","termid":"GO:0035235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"AMPA selective glutamate receptor signaling pathway","termid":"GO:0098990"}


id: PBO:0080544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 3","termid":"PBO:0080544"}


id: PBO:0091228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase","termid":"PBO:0091228"}


id: PBO:0026974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_mitochondrion","termid":"PBO:0026974"}


id: PR:P62506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl44 gene.","definition_xrefs":["UniProtKB:P62506","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L44, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.14","synonyms":[{"name":"Spom972h-mrpl44","type":"exact"}],"termid":"PR:P62506"}


id: PBO:0082973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; shuttles between nucleus and cytoplasm and is exported from the nucleus in an mRNA export-dependent manner; associates with translating ribosomes; involved in heme regulation of Hap1p as a component of the HMC complex, also involved in the organization of actin filaments; contains a La motif; SRO9 has a paralog, SLF1, that arose from the whole genome duplication","termid":"PBO:0082973"}


id: PBO:0063469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 subunit alpha 2","termid":"PBO:0063469"}


id: PBO:0029191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_intracellular_endomembrane_system_present","termid":"PBO:0029191"}


id: GO:0018417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 3Fe-2S cluster by tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido L-glutamato L-histidino L-serinyl nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018417"}


id: GO:0003993
data:
  {"annotated_genes":["SJAG_01970","SJAG_01667","SJAG_00711","SJAG_04067","SJAG_02405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74164,83520,105556],"is_not":false,"summary":null,"term":"GO:0003993"},{"annotations":[105768,105767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042131"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.","definition_xrefs":["EC:3.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00711":null,"SJAG_01667":null,"SJAG_01970":null,"SJAG_02405":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"acid phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:ACID-PHOSPHATASE-RXN","Reactome:R-HSA-196950"],"synonyms":[{"name":"acid monophosphatase activity","type":"related"},{"name":"acid nucleoside diphosphate phosphatase activity","type":"related"},{"name":"acid phosphohydrolase activity","type":"related"},{"name":"acid phosphomonoester hydrolase activity","type":"related"},{"name":"acid phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (acid optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (acid optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"},{"name":"uteroferrin","type":"related"}],"termid":"GO:0003993","terms_by_termid":{"GO:0003993":null,"GO:0042131":null}}


id: GO:0047952
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89617,101902],"is_not":false,"summary":null,"term":"GO:0047952"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NAD(P)+ = glycerone phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0004367","EC:1.1.1.8","Reactome:R-HSA-75889","MetaCyc:1.1.1.8-RXN","KEGG_REACTION:R00842","MetaCyc:GLYC3PDEHYDROGBIOSYN-RXN","KEGG_REACTION:R00844","GO:0036439","GO:0106257"],"synonyms":[{"name":"L-alpha-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-alpha-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol-3-phosphate:NAD(P) oxidoreductase activity","type":"related"},{"name":"L-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"NAD-L-glycerol-3-phosphate dehydrogenase activity","type":"related"},{"name":"NAD-alpha-glycerophosphate dehydrogenase activity","type":"related"},{"name":"NAD-dependent glycerol phosphate dehydrogenase activity","type":"related"},{"name":"NAD-dependent glycerol-3-phosphate dehydrogenase activity","type":"related"},{"name":"NAD-linked glycerol 3-phosphate dehydrogenase activity","type":"related"},{"name":"NADH-dihydroxyacetone phosphate reductase activity","type":"related"},{"name":"alpha-glycerol phosphate dehydrogenase (NAD) activity","type":"related"},{"name":"alpha-glycerophosphate dehydrogenase (NAD) activity","type":"related"},{"name":"glycerol 1-phosphate dehydrogenase activity","type":"related"},{"name":"glycerol phosphate dehydrogenase (NAD) activity","type":"related"},{"name":"glycerol phosphate dehydrogenase (nicotinamide adenine dinucleotide (phosphate)) activity","type":"related"},{"name":"glycerol-3-phosphate dehydrogenase (NAD(P)+) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase (NAD) activity","type":"related"},{"name":"glycerol-3-phosphate dehydrogenase [NAD+] activity","type":"narrow"},{"name":"glycerol-3-phosphate dehydrogenase [NADP+] activity","type":"narrow"},{"name":"glycerophosphate dehydrogenase (NAD) activity","type":"related"},{"name":"hydroglycerophosphate dehydrogenase activity","type":"broad"},{"name":"sn-glycerol-3-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047952","terms_by_termid":{"GO:0047952":null}}


id: PBO:0065085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated catalytic subunit alpha 2","termid":"PBO:0065085"}


id: PR:O43012
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dcd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidylate deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.13c","synonyms":[{"name":"Spom972h-dcd1","type":"exact"},{"name":"dCMP deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43012"}


id: PBO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_membrane_during_vegetative_growth","termid":"PBO:0035781"}


id: PBO:0060521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF intronic transcript 1","termid":"PBO:0060521"}


id: GO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of mating pheromone signal, as described in Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Saccharomyces) (obsolete GO:0007244)","synonyms":[{"name":"MAPKKK cascade (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007244"}


id: GO:0080188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A small RNA-based gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription. In general this process consists of three phases: biogenesis of siRNAs, scaffold RNA production, and the formation of the guiding complex that recruits de novo DNA methyltransferases to the target loci. Transposable elements are silenced by this mechanism.","definition_xrefs":["PMID:33031395","PMID:21420348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"},{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"gene silencing by RNA-directed DNA methylation","synonyms":[{"name":"RNA-directed DNA methylation","type":"related"},{"name":"RdDM","type":"exact"}],"termid":"GO:0080188"}


id: GO:0005297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + H+(out) = proline(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"proline:proton symporter activity","synonyms":[{"name":"hydrogen/proline transporter","type":"broad"}],"termid":"GO:0005297"}


id: PBO:0046530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lumenal protein 29 pseudogene 1","termid":"PBO:0046530"}


id: PBO:0068881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 121, pseudogene","termid":"PBO:0068881"}


id: GO:0045247
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the cytosol containing flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer flavoprotein complex","termid":"GO:0045251"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"cytosolic electron transfer flavoprotein complex","termid":"GO:0045247"}


id: PR:O60179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp10 gene.","definition_xrefs":["UniProtKB:O60179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.04c","synonyms":[{"name":"Spom972h-utp10","type":"exact"},{"name":"U3 protein 10 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60179"}


id: PBO:0048340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 51","termid":"PBO:0048340"}


id: GO:0044175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endosome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endosome membrane","synonyms":[{"name":"host endosome membrane","type":"exact"}],"termid":"GO:0044175"}


id: PBO:0062821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress responsive serine rich 1","termid":"PBO:0062821"}


id: PBO:0030880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_organization_during_vegetative_growth","termid":"PBO:0030880"}


id: PBO:0083437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOL036W","termid":"PBO:0083437"}


id: PBO:0060389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MZF1 antisense RNA 1","termid":"PBO:0060389"}


id: GO:1903100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate.","definition_xrefs":["GOC:bhm","PMID:19037259","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:1903100"}


id: PBO:0064296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 4","termid":"PBO:0064296"}


id: GO:0016487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"farnesol metabolic process","synonyms":[{"name":"farnesol metabolism","type":"exact"}],"termid":"GO:0016487"}


id: PBO:0066880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 180","termid":"PBO:0066880"}


id: PBO:0091297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10","termid":"PBO:0091297"}


id: GO:0033184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone ubiquitination (obsolete GO:0033184)","termid":"GO:0033184"}


id: PBO:0030444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G1/S_phase_transition","termid":"PBO:0030444"}


id: PBO:0082962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; induced in response to mycotoxin patulin; ubiquitinated protein similar to the human ring finger motif protein RNF10; predicted to be involved in repair of alkylated DNA due to interaction with MAG1","termid":"PBO:0082962"}


id: GO:0000324
data:
  {"annotated_genes":["SJAG_03909","SJAG_02782","SJAG_01507","SJAG_01941","SJAG_04616","SJAG_01088","SJAG_01619","SJAG_00877","SJAG_03256","SJAG_05194","SJAG_03316","SJAG_04167","SJAG_01027","SJAG_02943","SJAG_01183","SJAG_01983","SJAG_04232","SJAG_03313","SJAG_02699","SJAG_01324","SJAG_01991","SJAG_00402","SJAG_00771","SJAG_00299","SJAG_03250","SJAG_02023","SJAG_02665","SJAG_05294","SJAG_01493","SJAG_01803","SJAG_03899","SJAG_01319","SJAG_00029","SJAG_01913","SJAG_03072","SJAG_00212","SJAG_03928","SJAG_00457","SJAG_01078","SJAG_03450","SJAG_02716","SJAG_03508","SJAG_03608","SJAG_02656","SJAG_01868","SJAG_07012","SJAG_04023","SJAG_00209","SJAG_04643","SJAG_02289","SJAG_04975","SJAG_04506","SJAG_02414","SJAG_02694","SJAG_01471","SJAG_04867","SJAG_03089","SJAG_00051","SJAG_03725","SJAG_01509","SJAG_01571","SJAG_01344","SJAG_03848","SJAG_01145","SJAG_02853","SJAG_05213","SJAG_01033","SJAG_02029","SJAG_02196","SJAG_00370","SJAG_00018","SJAG_03652","SJAG_03656","SJAG_03442","SJAG_04015","SJAG_02565","SJAG_01112","SJAG_02330","SJAG_04714","SJAG_04312","SJAG_03363","SJAG_00181","SJAG_00534","SJAG_03667","SJAG_04471","SJAG_03406","SJAG_04502","SJAG_00115","SJAG_00587","SJAG_04819","SJAG_02495","SJAG_01817","SJAG_02132","SJAG_00620","SJAG_04426","SJAG_03976","SJAG_01299","SJAG_01036","SJAG_02344","SJAG_02603","SJAG_01612","SJAG_04785","SJAG_03138","SJAG_03371","SJAG_01080","SJAG_02962","SJAG_04955","SJAG_05245","SJAG_01032","SJAG_03009","SJAG_00821","SJAG_01505","SJAG_04698","SJAG_03100","SJAG_05184","SJAG_02114","SJAG_03400","SJAG_03403","SJAG_03951","SJAG_01072","SJAG_02432","SJAG_02440","SJAG_03447","SJAG_01236","SJAG_02103","SJAG_01783","SJAG_02957","SJAG_04717","SJAG_04637","SJAG_01407","SJAG_03606","SJAG_03022","SJAG_01990","SJAG_02100","SJAG_00570","SJAG_02117","SJAG_02581","SJAG_05210","SJAG_02315","SJAG_01095","SJAG_03137","SJAG_01795","SJAG_02902","SJAG_03960","SJAG_00824","SJAG_03497","SJAG_01978","SJAG_01320","SJAG_04790","SJAG_00688","SJAG_03586","SJAG_04963","SJAG_00732","SJAG_02076","SJAG_00589","SJAG_03405","SJAG_02356","SJAG_01400","SJAG_04725","SJAG_05342","SJAG_03987","SJAG_02433","SJAG_03895","SJAG_02578","SJAG_01219","SJAG_03511","SJAG_02060","SJAG_00132","SJAG_00638","SJAG_04966","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70327,70692,70822,72022,72187,72549,73406,73610,74619,74660,75510,75939,77364,78095,78556,78746,83735,83928,84223,85863,85864,90429,90687,91666,92076,92542,93167,94085,94090,97012,97328,98389,98462,99213,99447,99832,102920,103009,104167,104678,104777,104794,105129,107609,107979,108116,109403,109957,111997,113067],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[93196,97167,109408,83280,109676,108549,70696,89553,93408,101160,111037],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000328"},{"annotations":[73781,74260,70463,72434,91998,95450,100380,103225,78908,108799,113301,78706,88535,84845,89402,103636,107088,77903,99029,102777,93185,104630,104717,111727,86118,91734,89667,99362,75661,83828,92933,72214,92630,88614,102073,105705,102065,108487,91367,84823,72827,83810,91624,95735,99245,83534,91256,94246,95757,89528,74756,84905,104031,94106,108660,112737,102577,93608,70750,89346,73379,105574,112678,75324,91494,111388,71185,101117,89401,112183,70618,87709,91580,70953,78677,78560,109565,110095,112397,87164,77875,72442,72086,89694,90218,84891,97130,87767,72809,97452,100314,74381,105198,107066,109570,78390,77337,74053,94410,111798,77425,72896,94370,112522,112931,95486,93911,100538,78310,90247],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000329"}]},"cv_name":"cellular_component","definition":"A vacuole that has both lytic and storage functions. The fungal vacuole is a large, membrane-bounded organelle that functions as a reservoir for the storage of small molecules (including polyphosphate, amino acids, several divalent cations (e.g. calcium), other ions, and other small molecules) as well as being the primary compartment for degradation. It is an acidic compartment, containing an ensemble of acid hydrolases. At least in S. cerevisiae, there are indications that the morphology of the vacuole is variable and correlated with the cell cycle, with logarithmically growing cells having a multilobed, reticulated vacuole, while stationary phase cells contain a single large structure.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879693649","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"storage vacuole","termid":"GO:0000322"},{"relation_name":"is_a","term_name":"lytic vacuole","termid":"GO:0000323"}],"gene_count":171,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00029":null,"SJAG_00051":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00181":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00370":null,"SJAG_00402":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00570":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00620":null,"SJAG_00638":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01033":null,"SJAG_01036":null,"SJAG_01072":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01095":null,"SJAG_01112":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01219":null,"SJAG_01236":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01400":null,"SJAG_01407":null,"SJAG_01471":null,"SJAG_01493":null,"SJAG_01505":null,"SJAG_01507":null,"SJAG_01509":null,"SJAG_01571":null,"SJAG_01612":null,"SJAG_01619":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01868":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02060":null,"SJAG_02076":null,"SJAG_02100":null,"SJAG_02103":null,"SJAG_02114":null,"SJAG_02117":null,"SJAG_02132":null,"SJAG_02196":null,"SJAG_02289":null,"SJAG_02315":null,"SJAG_02330":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02440":null,"SJAG_02495":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02581":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02694":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_02962":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03313":null,"SJAG_03316":null,"SJAG_03363":null,"SJAG_03371":null,"SJAG_03400":null,"SJAG_03403":null,"SJAG_03405":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03508":null,"SJAG_03511":null,"SJAG_03586":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03652":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_03976":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04023":null,"SJAG_04167":null,"SJAG_04232":null,"SJAG_04312":null,"SJAG_04426":null,"SJAG_04471":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04637":null,"SJAG_04643":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04717":null,"SJAG_04725":null,"SJAG_04785":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_04867":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05210":null,"SJAG_05213":null,"SJAG_05245":null,"SJAG_05294":null,"SJAG_05342":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"fungal-type vacuole","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"vacuole, cell cycle-correlated morphology","type":"exact"}],"termid":"GO:0000324","terms_by_termid":{"GO:0000324":null,"GO:0000328":null,"GO:0000329":null}}


id: PBO:0072759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 9","termid":"PBO:0072759"}


id: GO:0071365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to auxin","termid":"GO:0009733"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to auxin stimulus","termid":"GO:0071365"}


id: PR:Q92345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C1F8.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.07c","synonyms":[{"name":"Spom972h-pdc101","type":"exact"}],"termid":"PR:Q92345"}


id: PBO:0063377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA associated protein 1","termid":"PBO:0063377"}


id: PBO:0042715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cementum protein 1","termid":"PBO:0042715"}


id: GO:0036050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-lysine residue by the addition of a succinyl group (CO-CH2-CH2-CO) to form N6-succinyl-L-lysine.","definition_xrefs":["GOC:sp","GOC:jsg","RESID:AA0545","PMID:21151122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein succinylation","termid":"GO:0018335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine succinylation","termid":"GO:0036050"}


id: PBO:0081328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 123, pseudogene","termid":"PBO:0081328"}


id: PBO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two MCB clusters regulate cell-cycle dependent cdc22+ transcription","termid":"PBO:0018254"}


id: GO:1990167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K27-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["PMID:23827681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K27-linked deubiquitination","termid":"GO:1990167"}


id: PBO:0049213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit associated protein 1","termid":"PBO:0049213"}


id: GO:0003189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the aortic valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"aortic valve morphogenesis","termid":"GO:0003180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic valve formation","termid":"GO:0003189"}


id: PBO:0085542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; interacts with Kti11p; deletion causes hypersensitivity to zymocin; homologous to mammalian ribosomal protein S7, no bacterial homolog; RPS7B has a paralog, RPS7A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085542"}


id: PBO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 157","termid":"PBO:0042088"}


id: PBO:0059339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS9 antisense RNA 1","termid":"PBO:0059339"}


id: PBO:0070012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1309, pseudogene","termid":"PBO:0070012"}


id: GO:1900377
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"negatively_regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"down regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"down-regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"down-regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"downregulation of secondary metabolite biosynthesis","type":"exact"},{"name":"downregulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"inhibition of secondary metabolite biosynthesis","type":"exact"},{"name":"inhibition of secondary metabolite biosynthetic process","type":"narrow"},{"name":"negative regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900377","terms_by_termid":{"GO:1905569":null}}


id: PBO:0090848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger","termid":"PBO:0090848"}


id: GO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of an oxidizable substrate, for example, fructose.","definition_xrefs":["GOC:jl","PMID:11029423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to oxidizable substrate","synonyms":[{"name":"taxis in response to oxidizable substrate","type":"exact"}],"termid":"GO:0042333"}


id: GO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: creatine + H2O = sarcosine + urea.","definition_xrefs":["RHEA:22456","EC:3.5.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"creatinase activity","secondary_identifiers":["KEGG_REACTION:R01566","MetaCyc:CREATINASE-RXN"],"synonyms":[{"name":"creatine amidinohydrolase activity","type":"related"}],"termid":"GO:0016980"}


id: GO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + Na+(out) = proline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"proline:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-444100","RHEA:28967"],"synonyms":[{"name":"sodium/proline symporter activity","type":"exact"}],"termid":"GO:0005298"}


id: SO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a mitochondria.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_sequence","synonyms":[{"name":"mitochondrial sequence","type":"exact"}],"termid":"SO:0000737"}


id: GO:1901056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trimethylenediamine.","definition_xrefs":["UniPathway:UPA00010","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"trimethylenediamine metabolic process","termid":"GO:1901055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine catabolic process","synonyms":[{"name":"trimethylenediamine breakdown","type":"exact"},{"name":"trimethylenediamine catabolism","type":"exact"},{"name":"trimethylenediamine degradation","type":"exact"}],"termid":"GO:1901056"}


id: RO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has end sequence y if the end of x is identical to the end of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_sequence","termid":"RO:0002518"}


id: PBO:0060757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 1","termid":"PBO:0060757"}


id: PBO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 7","termid":"PBO:0043680"}


id: PBO:0070887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL15 pseudogene 19","termid":"PBO:0070887"}


id: GO:0034577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylacetanilide + 1/2 O2 = acetanilide + acetone.","definition_xrefs":["UM-BBD_reactionID:r0914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"N-isopropylacetaniline monooxygenase activity","secondary_identifiers":["EC:1.14.15.-"],"termid":"GO:0034577"}


id: GO:1905870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["GOC:TermGenie","PMID:19737525","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"positively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044248","GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"positive regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"activation of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"activation of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"positive regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"up regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"up regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"up-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"up-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"upregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"upregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905870"}


id: FYPO:0004176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to a pheromone that occurs when the cell is subject to nitrogen starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:8668157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to pheromone and nitrogen starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to pheromone and nitrogen starvation","type":"related"},{"name":"decreased transcript level during cellular response to pheromone and nitrogen starvation","type":"exact"},{"name":"reduced RNA level during cellular response to pheromone and nitrogen starvation","type":"exact"}],"termid":"FYPO:0004176"}


id: PATO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A height which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"height","termid":"PATO:0000119"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased height","synonyms":[{"name":"tall","type":"related"}],"termid":"PATO:0000570"}


id: GO:0008871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + aminoglycoside = diphosphate + 2''-nucleotidylaminoglycoside.","definition_xrefs":["GOC:cb","EC:2.7.7.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside nucleotidyltransferase activity","termid":"GO:0034068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside 2''-nucleotidyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.46-RXN"],"synonyms":[{"name":"2''-aminoglycoside nucleotidyltransferase activity","type":"related"},{"name":"NTP:gentamicin 2''-nucleotidyltransferase activity","type":"narrow"},{"name":"gentamicin 2''- adenylyltransferase activity","type":"narrow"},{"name":"gentamicin 2''-nucleotidyltransferase activity","type":"narrow"},{"name":"gentamycin 2''-nucleotidyltransferase activity","type":"narrow"}],"termid":"GO:0008871"}


id: GO:0140855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 57) + ATP = histone H3-phosphoserine (position 57) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 57 of histone H3.","definition_xrefs":["PMID:24820035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0016301","GO:0003824","GO:0003674","GO:0004672"],"is_obsolete":false,"name":"histone H3S57 kinase activity","synonyms":[{"name":"histone kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S57 specific)","type":"exact"}],"termid":"GO:0140855"}


id: GO:0075031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of formation of symbiont germ tube hook structure for appressorium development","termid":"GO:0075030"},{"relation_name":"positively_regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"positive regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"},{"name":"positive regulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"positive regulation of symbiont germ tube hook structure formation on or near host","type":"related"}],"termid":"GO:0075031"}


id: GO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling.","definition_xrefs":["PMID:16618809","GOC:PARL","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory granule maturation","termid":"GO:0061792"}


id: PBO:0089342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Vma21","termid":"PBO:0089342"}


id: GO:0048782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyanophore differentiation","termid":"GO:0048781"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyanophore differentiation","synonyms":[{"name":"down regulation of cyanophore differentiation","type":"exact"},{"name":"down-regulation of cyanophore differentiation","type":"exact"},{"name":"downregulation of cyanophore differentiation","type":"exact"},{"name":"inhibition of cyanophore differentiation","type":"narrow"}],"termid":"GO:0048782"}


id: GO:0019792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete APG12 hydrolase activity (obsolete GO:0019792)","synonyms":[{"name":"APG12 hydrolase activity","type":"exact"}],"termid":"GO:0019792"}


id: GO:0045276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the respiratory chain located in the plasma membrane, containing about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex III","termid":"GO:0045275"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane respirasome","termid":"GO:0070470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex III","secondary_identifiers":["GO:0045286"],"synonyms":[{"name":"plasma membrane coenzyme Q-cytochrome c oxidoreductase complex","type":"exact"},{"name":"plasma membrane coenzyme Q-cytochrome c reductase complex","type":"exact"},{"name":"plasma membrane cytochrome bc1 complex","type":"exact"},{"name":"plasma membrane ubiquinol-cytochrome-c reductase complex","type":"exact"},{"name":"respiratory chain complex III","type":"broad"},{"name":"ubiquinol-cytochrome c oxidoreductase complex","type":"broad"},{"name":"ubiquinol-cytochrome-c reductase complex","type":"broad"}],"termid":"GO:0045276"}


id: PBO:0074674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 59A","termid":"PBO:0074674"}


id: GO:0051402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.","definition_xrefs":["CL:0000540","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron apoptotic process","synonyms":[{"name":"apoptosis of neuronal cells","type":"exact"},{"name":"apoptosis of neurons","type":"exact"},{"name":"neuron apoptosis","type":"narrow"},{"name":"neuron programmed cell death by apoptosis","type":"exact"},{"name":"neuronal cell apoptosis","type":"exact"},{"name":"neuronal cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of neuronal cells by apoptosis","type":"exact"},{"name":"programmed cell death of neurons by apoptosis","type":"exact"},{"name":"programmed cell death, neuronal cells","type":"exact"},{"name":"programmed cell death, neurons","type":"exact"}],"termid":"GO:0051402"}


id: PBO:0062904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-ACP synthase, mitochondrial","termid":"PBO:0062904"}


id: PBO:0070514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 13","termid":"PBO:0070514"}


id: PBO:0069997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1292, pseudogene","termid":"PBO:0069997"}


id: GO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a light-responsive receptor in the compound eye over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye photoreceptor development","synonyms":[{"name":"adult eye photoreceptor development","type":"narrow"}],"termid":"GO:0042051"}


id: PBO:0069061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 308, pseudogene","termid":"PBO:0069061"}


id: PBO:0073118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 2","termid":"PBO:0073118"}


id: PBO:0055523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2957","termid":"PBO:0055523"}


id: PBO:0055761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA imatinib upregulated","termid":"PBO:0055761"}


id: PBO:0046927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member A","termid":"PBO:0046927"}


id: PBO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.1","termid":"PBO:0001496"}


id: GO:1903870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methylenetetrahydrofolate reductase (NAD(P)H) activity.","definition_xrefs":["GO_REF:0000059","PMID:24769206","GOC:BHF","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:1903868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","synonyms":[{"name":"activation of 5,10-CH(2)-H(4)folate reductase activity","type":"narrow"},{"name":"activation of 5,10-CH2-H4folate reductase activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"narrow"},{"name":"activation of MetF","type":"related"},{"name":"activation of N5,10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"activation of N5,N10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"activation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase (NADPH2)","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"positive regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"positive regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of MetF","type":"related"},{"name":"positive regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"positive regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"positive regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"up regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"up regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"up regulation of MetF","type":"related"},{"name":"up regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"up regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"up-regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"up-regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of MetF","type":"related"},{"name":"up-regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up-regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"upregulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"upregulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"upregulation of MetF","type":"related"},{"name":"upregulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"upregulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"upregulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"}],"termid":"GO:1903870"}


