# genes

id: SJAG_01459
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74918],"is_not":false,"summary":null,"term":"GO:0007030"},{"annotations":[74917],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[98911],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[98904],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[98905],"is_not":false,"summary":null,"term":"GO:0005801"},{"annotations":[74916],"is_not":false,"summary":null,"term":"GO:0017119"},{"annotations":[98908],"is_not":false,"summary":null,"term":"GO:0016020"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXZ9","GOA:B6JXZ9","EnsemblGenomes-Tr:EEB06417","InterPro:IPR007265","EnsemblGenomes-Gn:SJAG_01459"],"deletion_viability":"unknown","disordered_region_coords":[[13,31],[406,407],[461,471],[726,753]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nop16","uniquename":"SJAG_01454"},{"name":"trp1","uniquename":"SJAG_01455"},{"name":"arf6","uniquename":"SJAG_01456"},{"name":"fmd1","uniquename":"SJAG_01457"},{"name":"acb1","uniquename":"SJAG_01458"},{"name":"cog3","uniquename":"SJAG_01459"},{"name":"tts1","uniquename":"SJAG_01460"},{"name":"arg41","uniquename":"SJAG_01461"},{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"}],"genes_by_uniquename":{"HGNC:18619":null,"SJAG_01459":null,"SPBC1539.05":null,"YER157W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04136","interpro_id":"IPR007265","interpro_name":"Conserved oligomeric Golgi complex, subunit 3","interpro_type":"Family","locations":[{"end":247,"score":5.3999999078028404e-33,"start":103}],"model":"PF04136","name":"Sec34-like family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13302","interpro_id":"IPR007265","interpro_name":"Conserved oligomeric Golgi complex, subunit 3","interpro_type":"Family","locations":[{"end":721,"score":0.0,"start":58}],"model":"PTHR13302:SF8","name":"CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3"}],"location":{"chromosome_name":"supercont5.3","end_pos":1676800,"start_pos":1674183,"strand":"reverse"},"low_complexity_region_coords":[[32,42],[126,137]],"name":"cog3","ortholog_annotations":[{"gene_uniquename":"SJAG_01459","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18619","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01459","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1539.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01459","ortholog_taxonid":4932,"ortholog_uniquename":"YER157W","reference_uniquename":"PMID:29761456"}],"product":"Golgi transport complex subunit Cog3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0016192","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005801":null,"GO:0006886":null,"GO:0006891":null,"GO:0007030":null,"GO:0016020":null,"GO:0017119":null,"GO:0032153":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01459.1"],"transcripts_by_uniquename":{"SJAG_01459.1":null},"uniprot_identifier":"B6JXZ9","uniquename":"SJAG_01459"}


id: SJAG_01460
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98900],"is_not":false,"summary":null,"term":"GO:1990809"},{"annotations":[98901],"is_not":false,"summary":null,"term":"GO:0140480"},{"annotations":[98903],"is_not":false,"summary":null,"term":"GO:0071763"}],"cellular_component":[{"annotations":[98892],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[98893],"is_not":false,"summary":null,"term":"GO:0032541"},{"annotations":[114264],"is_not":false,"summary":null,"term":"GO:0098826"},{"annotations":[98896],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[98898],"is_not":false,"summary":null,"term":"GO:0031965"},{"annotations":[114265],"is_not":false,"summary":null,"term":"GO:0005643"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01460","EnsemblGenomes-Tr:EEB06418","InterPro:IPR005344","GOA:B6JY00","UniProtKB/TrEMBL:B6JY00"],"deletion_viability":"unknown","disordered_region_coords":[[267,277]],"feature_publications":[{"reference_uniquename":"PMID:21802294","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"trp1","uniquename":"SJAG_01455"},{"name":"arf6","uniquename":"SJAG_01456"},{"name":"fmd1","uniquename":"SJAG_01457"},{"name":"acb1","uniquename":"SJAG_01458"},{"name":"cog3","uniquename":"SJAG_01459"},{"name":"tts1","uniquename":"SJAG_01460"},{"name":"arg41","uniquename":"SJAG_01461"},{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"}],"genes_by_uniquename":{"HGNC:25541":null,"SJAG_01460":null,"SPBC1539.04":null,"YGR026W":null,"YLL023C":null,"YLR064W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03661","interpro_id":"IPR005344","interpro_name":"TMEM33/Pom33 family","interpro_type":"Family","locations":[{"end":256,"score":2.900001184904852e-40,"start":17}],"model":"PF03661","name":"Transmembrane protein 33/Nucleoporin POM33"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12703","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":259,"score":0.0,"start":14}],"model":"PTHR12703:SF4","name":"TRANSMEMBRANE PROTEIN 33"}],"location":{"chromosome_name":"supercont5.3","end_pos":1678077,"start_pos":1677185,"strand":"reverse"},"low_complexity_region_coords":[[32,41],[182,195]],"name":"tts1","ortholog_annotations":[{"gene_uniquename":"SJAG_01460","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25541","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01460","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1539.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01460","ortholog_taxonid":4932,"ortholog_uniquename":"YGR026W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01460","ortholog_taxonid":4932,"ortholog_uniquename":"YLL023C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01460","ortholog_taxonid":4932,"ortholog_uniquename":"YLR064W","reference_uniquename":"PMID:29761456"}],"product":"tetra spanning protein 1, Tts1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21802294":null,"PMID:29761456":null},"subset_termids":["GO:0005643","GO:0005783","GO:0061024","GO:0005794","GO:0005938","GO:0005789","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005643":null,"GO:0005794":null,"GO:0031965":null,"GO:0032153":null,"GO:0032541":null,"GO:0071763":null,"GO:0098826":null,"GO:0140480":null,"GO:1990809":null},"tm_domain_coords":[[24,46],[53,75],[107,129],[182,204]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01460.1"],"transcripts_by_uniquename":{"SJAG_01460.1":null},"uniprot_identifier":"B6JY00","uniquename":"SJAG_01460"}


id: SJAG_01461
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70586],"is_not":false,"summary":null,"term":"GO:0042450"},{"annotations":[98890],"is_not":false,"summary":null,"term":"GO:0000050"}],"cellular_component":[{"annotations":[70587],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[70585],"is_not":false,"summary":null,"term":"GO:0004056"}]},"dbxrefs":["InterPro:IPR000362","InterPro:IPR022761","InterPro:IPR009049","InterPro:IPR008948","InterPro:IPR024083","GOA:B6JY01","InterPro:IPR020557","EnsemblGenomes-Gn:SJAG_01461","InterPro:IPR029419","UniProtKB/TrEMBL:B6JY01","EnsemblGenomes-Tr:EEB06419"],"deletion_viability":"unknown","disordered_region_coords":[[110,111],[395,396]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arf6","uniquename":"SJAG_01456"},{"name":"fmd1","uniquename":"SJAG_01457"},{"name":"acb1","uniquename":"SJAG_01458"},{"name":"cog3","uniquename":"SJAG_01459"},{"name":"tts1","uniquename":"SJAG_01460"},{"name":"arg41","uniquename":"SJAG_01461"},{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"}],"genes_by_uniquename":{"HGNC:746":null,"SJAG_01461":null,"SPBC1539.03c":null,"YHR018C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.275.10","interpro_id":"IPR024083","interpro_name":"Fumarase/histidase, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":234,"score":0.0,"start":26}],"model":"1k62A01","name":"Fumarase/aspartase (N-terminal domain)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.40.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":436,"score":0.0,"start":365}],"model":"1k62A03","name":"Fumarase/aspartase (C-terminal domain)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.200.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":452,"score":0.0,"start":124}],"model":"1k62A02","name":"Fumarase/aspartase (Central domain)"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00006","interpro_id":"IPR009049","interpro_name":"Argininosuccinate lyase","interpro_type":"Family","locations":[{"end":457,"score":0.0,"start":6}],"model":"MF_00006","name":"Argininosuccinate lyase [argH]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00206","interpro_id":"IPR022761","interpro_name":"Fumarate lyase, N-terminal","interpro_type":"Domain","locations":[{"end":305,"score":0.0,"start":10}],"model":"PF00206","name":"Lyase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14698","interpro_id":"IPR029419","interpro_name":"Argininosuccinate lyase, C-terminal","interpro_type":"Domain","locations":[{"end":435,"score":4.1000001097023576e-23,"start":369}],"model":"PF14698","name":"Argininosuccinate lyase C-terminal"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00145","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":128,"score":0.0,"start":106},{"end":167,"score":0.0,"start":147},{"end":214,"score":0.0,"start":198},{"end":260,"score":0.0,"start":236},{"end":296,"score":0.0,"start":280},{"end":334,"score":0.0,"start":315}],"model":"PR00145","name":""},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00149","interpro_id":"IPR000362","interpro_name":"Fumarate lyase family","interpro_type":"Family","locations":[{"end":125,"score":8.600000388383125e-28,"start":107},{"end":170,"score":8.600000388383125e-28,"start":152},{"end":263,"score":8.600000388383125e-28,"start":236},{"end":296,"score":8.600000388383125e-28,"start":280}],"model":"PR00149","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00163","interpro_id":"IPR020557","interpro_name":"Fumarate lyase, conserved site","interpro_type":"Conserved_site","locations":[{"end":289,"score":0.0,"start":280}],"model":"PS00163","name":"Fumarate lyases signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43814","interpro_id":"IPR009049","interpro_name":"Argininosuccinate lyase","interpro_type":"Family","locations":[{"end":459,"score":0.0,"start":4}],"model":"PTHR43814:SF1","name":"ARGININOSUCCINATE LYASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48557","interpro_id":"IPR008948","interpro_name":"L-Aspartase-like","interpro_type":"Homologous_superfamily","locations":[{"end":461,"score":0.0,"start":10}],"model":"0038817","name":"L-aspartase-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00838","interpro_id":"IPR009049","interpro_name":"Argininosuccinate lyase","interpro_type":"Family","locations":[{"end":457,"score":0.0,"start":7}],"model":"TIGR00838","name":"argininosuccinate lyase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01359","interpro_id":"IPR009049","interpro_name":"Argininosuccinate lyase","interpro_type":"Family","locations":[{"end":459,"score":0.0,"start":26}],"model":"cd01359","name":"Argininosuccinate lyase (argininosuccinase, ASAL)"}],"location":{"chromosome_name":"supercont5.3","end_pos":1679949,"start_pos":1678555,"strand":"forward"},"low_complexity_region_coords":[[364,367]],"name":"arg41","ortholog_annotations":[{"gene_uniquename":"SJAG_01461","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:746","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01461","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1539.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01461","ortholog_taxonid":4932,"ortholog_uniquename":"YHR018C","reference_uniquename":"PMID:29761456"}],"product":"argininosuccinate lyase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0016829","GO:0005829","GO:0006520","GO:0071941"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000050":null,"GO:0004056":null,"GO:0005829":null,"GO:0042450":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01461.1"],"transcripts_by_uniquename":{"SJAG_01461.1":null},"uniprot_identifier":"B6JY01","uniquename":"SJAG_01461"}


id: SJAG_01462
data:
  {"coiled_coil_coords":[[99,119],[153,173],[344,378]],"cv_annotations":{"cellular_component":[{"annotations":[98887],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["GOA:B6JY02","EnsemblGenomes-Gn:SJAG_01462","InterPro:IPR012916","UniProtKB/TrEMBL:B6JY02","InterPro:IPR039896","EnsemblGenomes-Tr:EEB06420"],"deletion_viability":"unknown","disordered_region_coords":[[1,40],[42,48],[106,221],[234,237],[239,241],[256,332],[410,416],[335,343],[379,399]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fmd1","uniquename":"SJAG_01457"},{"name":"acb1","uniquename":"SJAG_01458"},{"name":"cog3","uniquename":"SJAG_01459"},{"name":"tts1","uniquename":"SJAG_01460"},{"name":"arg41","uniquename":"SJAG_01461"},{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"}],"genes_by_uniquename":{"HGNC:5958":null,"SJAG_01462":null,"SPBC1539.02":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1681348,"start_pos":1680098,"strand":"reverse"},"low_complexity_region_coords":[[62,80],[83,94],[242,255],[362,378],[400,409]],"ortholog_annotations":[{"gene_uniquename":"SJAG_01462","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5958","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01462","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1539.02","reference_uniquename":"PMID:21511999"}],"product":"nuclear protein, human IK ortholog, implicated in meiotic chromosome segregation in fission yeast, splicing or spindle checkpoint in human","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01462.1"],"transcripts_by_uniquename":{"SJAG_01462.1":null},"uniprot_identifier":"B6JY02","uniquename":"SJAG_01462"}


id: SJAG_01463
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98883],"is_not":false,"summary":null,"term":"GO:0032543"},{"annotations":[98884],"is_not":false,"summary":null,"term":"GO:0006396"}],"cellular_component":[{"annotations":[72706],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[98885],"is_not":false,"summary":null,"term":"GO:0004525"},{"annotations":[72705],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR000999","InterPro:IPR036389","EnsemblGenomes-Tr:EEB06421","InterPro:IPR040030","GOA:B6JY03","EnsemblGenomes-Gn:SJAG_01463","UniProtKB/TrEMBL:B6JY03"],"deletion_viability":"unknown","disordered_region_coords":[[38,42]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"acb1","uniquename":"SJAG_01458"},{"name":"cog3","uniquename":"SJAG_01459"},{"name":"tts1","uniquename":"SJAG_01460"},{"name":"arg41","uniquename":"SJAG_01461"},{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"}],"genes_by_uniquename":{"HGNC:14514":null,"SJAG_01463":null,"SPBC1539.01c":null,"YLR312W-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.1520.10","interpro_id":"IPR036389","interpro_name":"Ribonuclease III, endonuclease domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":208,"score":1.9000000864326212e-24,"start":32}],"model":"1vw4900","name":"Ribonuclease III domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14622","interpro_id":"IPR000999","interpro_name":"Ribonuclease III domain","interpro_type":"Domain","locations":[{"end":197,"score":3.2000000576080303e-34,"start":68}],"model":"PF14622","name":"Ribonuclease-III-like"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28160","interpro_id":"IPR040030","interpro_name":"54S ribosomal protein L15, mitochondrial","interpro_type":"Family","locations":[{"end":209,"score":0.0,"start":34}],"model":"PTHR28160:SF1","name":"54S RIBOSOMAL PROTEIN L15, MITOCHONDRIAL"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF69065","interpro_id":"IPR036389","interpro_name":"Ribonuclease III, endonuclease domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":202,"score":1.1999999952050366e-11,"start":62}],"model":"0041655","name":"RNase III domain-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":1682337,"start_pos":1681705,"strand":"forward"},"name":"mrpl15","ortholog_annotations":[{"gene_uniquename":"SJAG_01463","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14514","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01463","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1539.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01463","ortholog_taxonid":4932,"ortholog_uniquename":"YLR312W-A","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L57","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0140053","GO:0016788","GO:0140098","GO:0005739","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0004525":null,"GO:0005762":null,"GO:0006396":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01463.1"],"transcripts_by_uniquename":{"SJAG_01463.1":null},"uniprot_identifier":"B6JY03","uniquename":"SJAG_01463"}


id: SJAG_01464
data:
  {"coiled_coil_coords":[[347,374],[456,476]],"cv_annotations":{"biological_process":[{"annotations":[102482],"is_not":false,"summary":null,"term":"GO:0031028"}],"cellular_component":[{"annotations":[102479],"is_not":false,"summary":null,"term":"GO:0090619"},{"annotations":[102481],"is_not":false,"summary":null,"term":"GO:0061499"}],"molecular_function":[{"annotations":[102483],"is_not":false,"summary":null,"term":"GO:0035591"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01464","EnsemblGenomes-Tr:EEB06422","InterPro:IPR021750","UniProtKB/TrEMBL:B6JY04"],"deletion_viability":"unknown","disordered_region_coords":[[306,326],[333,335],[345,346],[365,366],[426,455],[498,535],[537,543],[549,551],[664,678],[15,270],[375,396],[477,476]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cog3","uniquename":"SJAG_01459"},{"name":"tts1","uniquename":"SJAG_01460"},{"name":"arg41","uniquename":"SJAG_01461"},{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"}],"genes_by_uniquename":{"SJAG_01464":null,"SPBC244.01c":null,"YDL239C":null,"YNL225C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF11778","interpro_id":"IPR021750","interpro_name":"Septation initiation Sid4-like","interpro_type":"Family","locations":[{"end":644,"score":3.700000092976552e-7,"start":566}],"model":"PF11778","name":"Septation initiation"}],"location":{"chromosome_name":"supercont5.3","end_pos":1684720,"start_pos":1682524,"strand":"reverse"},"low_complexity_region_coords":[[271,305],[397,425],[477,497],[615,627]],"name":"sid4","ortholog_annotations":[{"gene_uniquename":"SJAG_01464","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC244.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01464","ortholog_taxonid":4932,"ortholog_uniquename":"YDL239C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01464","ortholog_taxonid":4932,"ortholog_uniquename":"YNL225C","reference_uniquename":"PMID:29761456"}],"product":"SIN component scaffold protein Sid4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0015630","GO:0060090","GO:0023052","GO:0005816"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0031028":null,"GO:0035591":null,"GO:0061499":null,"GO:0090619":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01464.1"],"transcripts_by_uniquename":{"SJAG_01464.1":null},"uniprot_identifier":"B6JY04","uniquename":"SJAG_01464"}


id: SJAG_01465
data:
  {"coiled_coil_coords":[[862,882]],"cv_annotations":{"biological_process":[{"annotations":[71865],"is_not":false,"summary":null,"term":"GO:0006355"},{"annotations":[92240],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[92237],"is_not":false,"summary":null,"term":"GO:0000812"}],"molecular_function":[{"annotations":[71862],"is_not":false,"summary":null,"term":"GO:0034647"}]},"dbxrefs":["InterPro:IPR011011","InterPro:IPR019787","InterPro:IPR003349","UniProtKB/TrEMBL:B6JY05","InterPro:IPR013637","InterPro:IPR001965","InterPro:IPR013083","EnsemblGenomes-Tr:EEB06423","EnsemblGenomes-Gn:SJAG_01465","GOA:B6JY05","InterPro:IPR004198","InterPro:IPR019786","InterPro:IPR003347"],"deletion_viability":"unknown","disordered_region_coords":[[2,3],[37,38],[54,55],[112,114],[116,119],[221,221],[713,738],[827,828],[835,836],[863,864],[1174,1176],[1182,1213],[1228,1233],[1293,1294],[205,205]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tts1","uniquename":"SJAG_01460"},{"name":"arg41","uniquename":"SJAG_01461"},{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"}],"genes_by_uniquename":{"HGNC:11114":null,"HGNC:11115":null,"HGNC:18039":null,"HGNC:9886":null,"SJAG_01465":null,"SPAC343.11c":null,"YMR176W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.120.650","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":503,"score":1.700055296918868e-41,"start":51},{"end":1437,"score":1.100000014578155e-14,"start":1315}],"model":"5fwjA01","name":"Cupin"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":274,"score":3.7999998703242e-9,"start":204},{"end":1093,"score":2.499999990010493e-13,"start":1025}],"model":"2e6sA00","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02373","interpro_id":"IPR003347","interpro_name":"JmjC domain","interpro_type":"Domain","locations":[{"end":492,"score":1.099999972191823e-25,"start":381}],"model":"PF02373","name":"JmjC domain, hydroxylase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02928","interpro_id":"IPR004198","interpro_name":"Zinc finger, C5HC2-type","interpro_type":"Domain","locations":[{"end":630,"score":9.399999667536463e-10,"start":580}],"model":"PF02928","name":"C5HC2 zinc finger"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08429","interpro_id":"IPR013637","interpro_name":"Lysine-specific demethylase-like domain","interpro_type":"Domain","locations":[{"end":994,"score":0.0,"start":645}],"model":"PF08429","name":"PLU-1-like protein"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01359","interpro_id":"IPR019786","interpro_name":"Zinc finger, PHD-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":273,"score":0.0,"start":230},{"end":1080,"score":0.0,"start":1037},{"end":1365,"score":0.0,"start":1320}],"model":"PS01359","name":"Zinc finger PHD-type signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50016","interpro_id":"IPR019787","interpro_name":"Zinc finger, PHD-finger","interpro_type":"Domain","locations":[{"end":276,"score":0.0,"start":227},{"end":1083,"score":0.0,"start":1034},{"end":1368,"score":0.0,"start":1317}],"model":"PS50016","name":"Zinc finger PHD-type profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51183","interpro_id":"IPR003349","interpro_name":"JmjN domain","interpro_type":"Domain","locations":[{"end":98,"score":0.0,"start":57}],"model":"PS51183","name":"JmjN domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51184","interpro_id":"IPR003347","interpro_name":"JmjC domain","interpro_type":"Domain","locations":[{"end":509,"score":0.0,"start":338}],"model":"PS51184","name":"JmjC domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10694","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":960,"score":0.0,"start":58}],"model":"PTHR10694:SF134","name":"LYSINE-SPECIFIC DEMETHYLASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00249","interpro_id":"IPR001965","interpro_name":"Zinc finger, PHD-type","interpro_type":"Domain","locations":[{"end":274,"score":4.099999841855606e-6,"start":229},{"end":1081,"score":6.600000119760807e-7,"start":1036},{"end":1366,"score":5.700000027530905e-9,"start":1319}],"model":"SM00249","name":"PHD zinc finger"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00545","interpro_id":"IPR003349","interpro_name":"JmjN domain","interpro_type":"Domain","locations":[{"end":97,"score":0.006500000134110451,"start":56}],"model":"SM00545","name":"Small domain found in the jumonji family of transcription factors"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00558","interpro_id":"IPR003347","interpro_name":"JmjC domain","interpro_type":"Domain","locations":[{"end":509,"score":1.5000000601271012e-26,"start":350}],"model":"SM00558","name":"A domain family that is part of the cupin metalloenzyme superfamily."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51197","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":519,"score":3.29999985670959e-11,"start":382}],"model":"0047105","name":"Clavaminate synthase-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57903","interpro_id":"IPR011011","interpro_name":"Zinc finger, FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":276,"score":1.549999950611891e-7,"start":224},{"end":1089,"score":1.1699999693040586e-13,"start":1031},{"end":1373,"score":3.989999858831396e-14,"start":1312}],"model":"0050473","name":"FYVE/PHD zinc finger"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd15518","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1080,"score":3.6063000138335724e-17,"start":1036}],"model":"cd15518","name":"PHD finger found in Saccharomyces cerevisiae extracellular matrix protein 5 (Ecm5p), Schizosaccharomyces pombe Lid2 complex component Lid2p, and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1690009,"start_pos":1685610,"strand":"forward"},"low_complexity_region_coords":[[120,136],[206,220],[701,723],[720,737],[859,869],[1059,1074],[1219,1227],[1234,1245],[1270,1287]],"name":"msc1","ortholog_annotations":[{"gene_uniquename":"SJAG_01465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11114","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11115","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18039","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9886","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01465","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01465","ortholog_taxonid":4932,"ortholog_uniquename":"YMR176W","reference_uniquename":"PMID:26896847"}],"product":"Swr1 complex histone demethylase subunit Msc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0006325","GO:0006351","GO:0016491","GO:0005634","GO:0005654","GO:0005694","GO:0140096","GO:0032452","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000812":null,"GO:0006355":null,"GO:0034647":null,"GO:0045815":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01465.1"],"transcripts_by_uniquename":{"SJAG_01465.1":null},"uniprot_identifier":"B6JY05","uniquename":"SJAG_01465"}


id: SJAG_01466
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71820],"is_not":false,"summary":null,"term":"GO:0009086"},{"annotations":[71821],"is_not":false,"summary":null,"term":"GO:0035999"}],"cellular_component":[{"annotations":[92229],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[71822],"is_not":false,"summary":null,"term":"GO:0071949"},{"annotations":[92234],"is_not":false,"summary":null,"term":"GO:0106313"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY06","InterPro:IPR003171","EnsemblGenomes-Gn:SJAG_01466","InterPro:IPR004621","EnsemblGenomes-Tr:EEB06424","InterPro:IPR029041","GOA:B6JY06"],"deletion_viability":"unknown","disordered_region_coords":[[163,164],[448,449]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arg41","uniquename":"SJAG_01461"},{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"}],"genes_by_uniquename":{"HGNC:7436":null,"SJAG_01466":null,"SPAC343.10":null,"YPL023C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.20.220","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":302,"score":0.0,"start":1}],"model":"6fnuA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02219","interpro_id":"IPR003171","interpro_name":"Methylenetetrahydrofolate reductase-like","interpro_type":"Family","locations":[{"end":303,"score":0.0,"start":11}],"model":"PF02219","name":"Methylenetetrahydrofolate reductase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45754","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":620,"score":0.0,"start":1}],"model":"PTHR45754:SF1","name":"METHYLENETETRAHYDROFOLATE REDUCTASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51730","interpro_id":"IPR029041","interpro_name":"FAD-linked oxidoreductase-like","interpro_type":"Homologous_superfamily","locations":[{"end":304,"score":0.0,"start":8}],"model":"0050099","name":"FAD-linked oxidoreductase"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00677","interpro_id":"IPR004621","interpro_name":"Eukaryotic-type methylenetetrahydrofolate reductase","interpro_type":"Family","locations":[{"end":306,"score":0.0,"start":17}],"model":"TIGR00677","name":"methylenetetrahydrofolate reductase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00537","interpro_id":"IPR003171","interpro_name":"Methylenetetrahydrofolate reductase-like","interpro_type":"Family","locations":[{"end":299,"score":0.0,"start":17}],"model":"cd00537","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":1692303,"start_pos":1690423,"strand":"reverse"},"low_complexity_region_coords":[[49,61],[54,72]],"name":"met11","ortholog_annotations":[{"gene_uniquename":"SJAG_01466","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7436","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01466","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01466","ortholog_taxonid":4932,"ortholog_uniquename":"YPL023C","reference_uniquename":"PMID:29761456"}],"product":"methylenetetrahydrofolate reductase Met11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0016491","GO:0006520","GO:0006790"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0009086":null,"GO:0035999":null,"GO:0071949":null,"GO:0106313":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01466.1"],"transcripts_by_uniquename":{"SJAG_01466.1":null},"uniprot_identifier":"B6JY06","uniquename":"SJAG_01466"}


id: SJAG_01467
data:
  {"coiled_coil_coords":[[367,387]],"cv_annotations":{"biological_process":[{"annotations":[72002],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[72001],"is_not":false,"summary":null,"term":"GO:0007030"},{"annotations":[71996],"is_not":false,"summary":null,"term":"GO:0061025"},{"annotations":[59435],"is_not":false,"summary":null,"term":"GO:0051028"},{"annotations":[71999],"is_not":false,"summary":null,"term":"GO:0031468"},{"annotations":[72000],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[71998],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71997],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[72003],"is_not":false,"summary":null,"term":"GO:0043130"}]},"dbxrefs":["InterPro:IPR012989","InterPro:IPR036241","InterPro:IPR029071","UniProtKB/TrEMBL:B6JY07","InterPro:IPR005637","EnsemblGenomes-Gn:SJAG_01467","EnsemblGenomes-Tr:EEB06425","InterPro:IPR009060","GOA:B6JY07","InterPro:IPR001012"],"deletion_viability":"unknown","disordered_region_coords":[[8,12],[113,197],[215,231],[234,237],[239,245],[274,311],[370,373],[378,381],[385,386],[43,46],[59,64],[77,76],[86,95]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01462"},{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"},{"name":"gid7","uniquename":"SJAG_01472"}],"genes_by_uniquename":{"HGNC:15912":null,"HGNC:27035":null,"HGNC:27265":null,"SJAG_01467":null,"SPAC343.09":null,"YBL058W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":41,"score":8.499999815114734e-9,"start":1}],"model":"1v92A00","name":"DNA helicase RuvA subunit, C-terminal domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.20.90","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":388,"score":3.500000105138317e-31,"start":261}],"model":"1s3sH00","name":"Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.420.210","interpro_id":"IPR036241","interpro_name":"NSFL1 cofactor p47, SEP domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":260,"score":3.200000100398064e-21,"start":197}],"model":"1ss6A01","name":"SEP domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00789","interpro_id":"IPR001012","interpro_name":"UBX domain","interpro_type":"Domain","locations":[{"end":387,"score":1.1000000389727038e-11,"start":313}],"model":"PF00789","name":"UBX domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08059","interpro_id":"IPR012989","interpro_name":"SEP domain","interpro_type":"Domain","locations":[{"end":273,"score":2.69999990485058e-24,"start":202}],"model":"PF08059","name":"SEP domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14555","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":35,"score":6.599999778700294e-6,"start":4}],"model":"PF14555","name":"UBA-like domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50033","interpro_id":"IPR001012","interpro_name":"UBX domain","interpro_type":"Domain","locations":[{"end":387,"score":0.0,"start":313}],"model":"PS50033","name":"UBX domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51281","interpro_id":"IPR005637","interpro_name":"TAP C-terminal (TAP-C) domain","interpro_type":"Domain","locations":[{"end":51,"score":0.0,"start":1}],"model":"PS51281","name":"TAP C-terminal (TAP-C) domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51399","interpro_id":"IPR012989","interpro_name":"SEP domain","interpro_type":"Domain","locations":[{"end":262,"score":0.0,"start":197}],"model":"PS51399","name":"SEP domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23333","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":387,"score":0.0,"start":18}],"model":"PTHR23333:SF20","name":"UBX DOMAIN CONTAINING PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00166","interpro_id":"IPR001012","interpro_name":"UBX domain","interpro_type":"Domain","locations":[{"end":388,"score":0.00011999999696854502,"start":312}],"model":"SM00166","name":"Domain present in ubiquitin-regulatory proteins"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00553","interpro_id":"IPR012989","interpro_name":"SEP domain","interpro_type":"Domain","locations":[{"end":285,"score":8.899999807229646e-33,"start":197}],"model":"SM00553","name":"Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF102848","interpro_id":"IPR036241","interpro_name":"NSFL1 cofactor p47, SEP domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":281,"score":2.2199999950027285e-27,"start":196}],"model":"0049459","name":"NSFL1 (p97 ATPase) cofactor p47, SEP domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46934","interpro_id":"IPR009060","interpro_name":"UBA-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":39,"score":0.00001809999957913533,"start":2}],"model":"0044670","name":"UBA-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54236","interpro_id":"IPR029071","interpro_name":"Ubiquitin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":386,"score":1.199999961918627e-21,"start":268}],"model":"0049310","name":"Ubiquitin-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01770","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":387,"score":3.155019933158184e-21,"start":319}],"model":"cd01770","name":"Ubiquitin regulatory domain X (UBX) found in UBX domain-containing proteins UBXN2A, UBXN2B, NSFL1C/UBXN2C, and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd14348","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":35,"score":2.3155900308324817e-8,"start":4}],"model":"cd14348","name":"UBA-like domain found in NSFL1 cofactor p47 and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1694164,"start_pos":1692995,"strand":"reverse"},"low_complexity_region_coords":[[47,58],[65,76],[77,85],[96,112]],"name":"ubx3","ortholog_annotations":[{"gene_uniquename":"SJAG_01467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15912","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:27035","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:27265","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01467","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01467","ortholog_taxonid":4932,"ortholog_uniquename":"YBL058W","reference_uniquename":"PMID:29761456"}],"product":"UBX domain protein Ubx3, Cdc48 cofactor","references_by_uniquename":{"GO_REF:0000002":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0061024","GO:0006914","GO:0005829","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000045":null,"GO:0005634":null,"GO:0005829":null,"GO:0007030":null,"GO:0031468":null,"GO:0043130":null,"GO:0043161":null,"GO:0051028":null,"GO:0061025":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01467.1"],"transcripts_by_uniquename":{"SJAG_01467.1":null},"uniprot_identifier":"B6JY07","uniquename":"SJAG_01467"}


id: SJAG_01468
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92219],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[92217],"is_not":false,"summary":null,"term":"GO:0005763"}],"molecular_function":[{"annotations":[92220],"is_not":false,"summary":null,"term":"GO:0070181"},{"annotations":[92221],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01468","InterPro:IPR014717","EnsemblGenomes-Tr:EEB06426","GOA:B6JY08","InterPro:IPR000529","UniProtKB/TrEMBL:B6JY08","InterPro:IPR035980"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl15","uniquename":"SJAG_01463"},{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"},{"name":"gid7","uniquename":"SJAG_01472"},{"name":"apc11","uniquename":"SJAG_05236"}],"genes_by_uniquename":{"HGNC:14051":null,"SJAG_01468":null,"SPAC343.08c":null,"YKL003C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.60","interpro_id":"IPR014717","interpro_name":"Translation elongation factor EF1B/ribosomal protein S6","interpro_type":"Homologous_superfamily","locations":[{"end":111,"score":3.900000125515584e-24,"start":1}],"model":"6neqF00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01250","interpro_id":"IPR000529","interpro_name":"Ribosomal protein S6","interpro_type":"Family","locations":[{"end":103,"score":1.0999999986962872e-16,"start":4}],"model":"PF01250","name":"Ribosomal protein S6"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54995","interpro_id":"IPR035980","interpro_name":"Ribosomal protein S6 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":104,"score":1.700000036575222e-11,"start":1}],"model":"0054589","name":"Ribosomal protein S6"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd15465","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":104,"score":8.714400007392508e-23,"start":3}],"model":"cd15465","name":"Mitochondrial Ribosomal Protein (MRP) S6"}],"location":{"chromosome_name":"supercont5.3","end_pos":1695227,"start_pos":1694767,"strand":"forward"},"name":"mrp17","ortholog_annotations":[{"gene_uniquename":"SJAG_01468","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14051","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01468","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01468","ortholog_taxonid":4932,"ortholog_uniquename":"YKL003C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit S6","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005198","GO:0005739","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005763":null,"GO:0032543":null,"GO:0070181":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01468.1"],"transcripts_by_uniquename":{"SJAG_01468.1":null},"uniprot_identifier":"B6JY08","uniquename":"SJAG_01468"}


id: SJAG_01469
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[92213],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[75291],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[92215],"is_not":false,"summary":null,"term":"GO:0005628"}],"molecular_function":[{"annotations":[75290],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["InterPro:IPR000504","InterPro:IPR012677","InterPro:IPR035979","UniProtKB/TrEMBL:B6JY09","GOA:B6JY09","EnsemblGenomes-Tr:EEB06427","EnsemblGenomes-Gn:SJAG_01469"],"deletion_viability":"unknown","disordered_region_coords":[[119,120],[380,383],[416,422]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sid4","uniquename":"SJAG_01464"},{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"},{"name":"gid7","uniquename":"SJAG_01472"},{"name":"apc11","uniquename":"SJAG_05236"},{"name":"img1","uniquename":"SJAG_01473"}],"genes_by_uniquename":{"SJAG_01469":null,"SPAC343.07":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":110,"score":4.799999847674508e-19,"start":5},{"end":385,"score":6.999999777858658e-22,"start":252}],"model":"1hl6C00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00076","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":97,"score":7.200000280227839e-15,"start":23},{"end":365,"score":6.799999799356193e-12,"start":294}],"model":"PF00076","name":"RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50102","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":104,"score":0.0,"start":21},{"end":372,"score":0.0,"start":292}],"model":"PS50102","name":"Eukaryotic RNA Recognition Motif (RRM) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR48025","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":370,"score":2.6999999983842386e-36,"start":113}],"model":"PTHR48025:SF1","name":"OS02G0815200 PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00360","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":100,"score":4.499999844270154e-18,"start":22},{"end":234,"score":4.400000095367432,"start":162},{"end":368,"score":2.0000000072549875e-15,"start":293}],"model":"SM00360","name":"RNA recognition motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":232,"score":3.959999955110826e-21,"start":22},{"end":384,"score":1.899999939704493e-21,"start":282}],"model":"0049769","name":"RNA-binding domain, RBD"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00590","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":100,"score":2.4880699470533515e-17,"start":23}],"model":"cd00590","name":"RNA recognition motif (RRM) superfamily"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd21621","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":236,"score":5.666049796772063e-35,"start":163}],"model":"cd21621","name":"RNA recognition motif 2 (RRM2) found in Schizosaccharomyces pombe mRNA export factor Crp79, meiotically up-regulated gene 28 protein (Mug28) and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd21622","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":380,"score":0.0,"start":289}],"model":"cd21622","name":"RNA recognition motif 3 (RRM3) found in Schizosaccharomyces pombe mRNA export factor Crp79, meiotically up-regulated gene 28 protein (Mug28) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1696791,"start_pos":1695322,"strand":"reverse"},"low_complexity_region_coords":[[99,109],[143,156]],"name":"mug28","ortholog_annotations":[{"gene_uniquename":"SJAG_01469","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.07","reference_uniquename":"PMID:21511999"}],"product":"RNA-binding protein Mug28","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null},"subset_termids":["GO:0005634","GO:0005628"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005628":null,"GO:0005634":null,"GO:0005737":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01469.1"],"transcripts_by_uniquename":{"SJAG_01469.1":null},"uniprot_identifier":"B6JY09","uniquename":"SJAG_01469"}


id: SJAG_01470
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92210],"is_not":false,"summary":null,"term":"GO:0007006"},{"annotations":[72950],"is_not":false,"summary":null,"term":"GO:0017121"}],"cellular_component":[{"annotations":[92208],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[72951],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[72949],"is_not":false,"summary":null,"term":"GO:0017128"}]},"dbxrefs":["GOA:B6JY10","InterPro:IPR005552","EnsemblGenomes-Gn:SJAG_01470","InterPro:IPR025659","EnsemblGenomes-Tr:EEB06428","UniProtKB/TrEMBL:B6JY10"],"deletion_viability":"unknown","disordered_region_coords":[[258,264],[266,268],[275,276],[319,370]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"msc1","uniquename":"SJAG_01465"},{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"},{"name":"gid7","uniquename":"SJAG_01472"},{"name":"apc11","uniquename":"SJAG_05236"},{"name":"img1","uniquename":"SJAG_01473"},{"name":"erg8","uniquename":"SJAG_01474"}],"genes_by_uniquename":{"HGNC:16494":null,"HGNC:16497":null,"HGNC:9092":null,"SJAG_01470":null,"SPAC343.06c":null,"YJR100C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03803","interpro_id":"IPR005552","interpro_name":"Scramblase","interpro_type":"Family","locations":[{"end":302,"score":0.0,"start":62}],"model":"PF03803","name":"Scramblase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23248","interpro_id":"IPR005552","interpro_name":"Scramblase","interpro_type":"Family","locations":[{"end":307,"score":0.0,"start":52}],"model":"PTHR23248:SF9","name":"PHOSPHOLIPID SCRAMBLASE-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54518","interpro_id":"IPR025659","interpro_name":"Tubby-like, C-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":249,"score":0.00002879999919969123,"start":137}],"model":"0053290","name":"Tubby C-terminal domain-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":1698158,"start_pos":1696974,"strand":"forward"},"low_complexity_region_coords":[[137,150],[167,178]],"name":"pls1","ortholog_annotations":[{"gene_uniquename":"SJAG_01470","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16494","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01470","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16497","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01470","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9092","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01470","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01470","ortholog_taxonid":4932,"ortholog_uniquename":"YJR100C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial phospholipid scramblase Pls1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005886","GO:0007005","GO:0140303","GO:0061024","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005886":null,"GO:0007006":null,"GO:0017121":null,"GO:0017128":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01470.1"],"transcripts_by_uniquename":{"SJAG_01470.1":null},"uniprot_identifier":"B6JY10","uniquename":"SJAG_01470"}


id: SJAG_01471
data:
  {"cv_annotations":{"biological_process":[{"annotations":[67638],"is_not":false,"summary":null,"term":"GO:0016539"},{"annotations":[92200],"is_not":false,"summary":null,"term":"GO:0090465"},{"annotations":[92201],"is_not":false,"summary":null,"term":"GO:0090464"},{"annotations":[92202],"is_not":false,"summary":null,"term":"GO:0090463"},{"annotations":[67647],"is_not":false,"summary":null,"term":"GO:0015986"},{"annotations":[92203],"is_not":false,"summary":null,"term":"GO:1902600"}],"cellular_component":[{"annotations":[92195],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92196],"is_not":false,"summary":null,"term":"GO:0012505"},{"annotations":[77337],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[92198],"is_not":false,"summary":null,"term":"GO:0000221"}],"molecular_function":[{"annotations":[92204],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[92205],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[67634],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[67637],"is_not":false,"summary":null,"term":"GO:0004519"},{"annotations":[92206],"is_not":false,"summary":null,"term":"GO:0046933"},{"annotations":[92207],"is_not":false,"summary":null,"term":"GO:0046961"}]},"dbxrefs":["InterPro:IPR027434","EnsemblGenomes-Tr:EEB06429","InterPro:IPR024034","InterPro:IPR036844","InterPro:IPR004042","InterPro:IPR031686","EnsemblGenomes-Gn:SJAG_01471","InterPro:IPR022878","UniProtKB/TrEMBL:B6JY11","InterPro:IPR003587","InterPro:IPR006141","InterPro:IPR023366","InterPro:IPR004100","GOA:B6JY11","InterPro:IPR007868","InterPro:IPR007869","InterPro:IPR020003","InterPro:IPR000194","InterPro:IPR036121","InterPro:IPR027417"],"deletion_viability":"unknown","disordered_region_coords":[[791,793],[889,893]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"met11","uniquename":"SJAG_01466"},{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"},{"name":"gid7","uniquename":"SJAG_01472"},{"name":"apc11","uniquename":"SJAG_05236"},{"name":"img1","uniquename":"SJAG_01473"},{"name":"erg8","uniquename":"SJAG_01474"},{"name":"slx1","uniquename":"SJAG_05237"}],"genes_by_uniquename":{"HGNC:851":null,"SJAG_01471":null,"SPAC343.05":null,"YDL185W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.1140.10","interpro_id":"IPR024034","interpro_name":"ATPase, F1/V1 complex, beta/alpha subunit, C-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":1095,"score":1.1999318750013409e-41,"start":940}],"model":"3vr4B04","name":"Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.30.20","interpro_id":"IPR023366","interpro_name":"ATP synthase subunit alpha, N-terminal domain-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":93,"score":7.000000210276634e-31,"start":24}],"model":"3gqbA01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.100","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":211,"score":0.0,"start":138}],"model":"5bn3A03","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.28.10","interpro_id":"IPR027434","interpro_name":"Homing endonuclease","interpro_type":"Homologous_superfamily","locations":[{"end":718,"score":1.700055296918868e-41,"start":464}],"model":"1ef0B02","name":"Homing endonucleases"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":295,"score":0.0,"start":95},{"end":938,"score":0.0,"start":742}],"model":"5bn3A02","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00006","interpro_id":"IPR000194","interpro_name":"ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain","interpro_type":"Domain","locations":[{"end":939,"score":0.0,"start":238}],"model":"PF00006","name":"ATP synthase alpha/beta family, nucleotide-binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02874","interpro_id":"IPR004100","interpro_name":"ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain","interpro_type":"Domain","locations":[{"end":90,"score":1.4000000431949738e-13,"start":28}],"model":"PF02874","name":"ATP synthase alpha/beta family, beta-barrel domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05203","interpro_id":"IPR007868","interpro_name":"Hom-end-associated Hint","interpro_type":"Domain","locations":[{"end":759,"score":0.0,"start":285}],"model":"PF05203","name":"Hom_end-associated Hint"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05204","interpro_id":"IPR007869","interpro_name":"Homing endonuclease PI-Sce","interpro_type":"Domain","locations":[{"end":713,"score":3.700000071918295e-28,"start":610}],"model":"PF05204","name":"Homing endonuclease"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16886","interpro_id":"IPR031686","interpro_name":"ATPsynthase alpha/beta subunit, N-terminal extension","interpro_type":"Domain","locations":[{"end":227,"score":1.5414283107572988e-44,"start":106}],"model":"PF16886","name":"ATPsynthase alpha/beta subunit N-term extension"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00152","interpro_id":"IPR020003","interpro_name":"ATPase, alpha/beta subunit, nucleotide-binding domain, active site","interpro_type":"Active_site","locations":[{"end":939,"score":0.0,"start":930}],"model":"PS00152","name":"ATP synthase alpha and beta subunits signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50817","interpro_id":"IPR006141","interpro_name":"Intein N-terminal splicing region","interpro_type":"PTM","locations":[{"end":361,"score":0.0,"start":285}],"model":"PS50817","name":"Intein N-terminal splicing motif profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50819","interpro_id":"IPR004042","interpro_name":"Intein DOD homing endonuclease","interpro_type":"Domain","locations":[{"end":667,"score":0.0,"start":493}],"model":"PS50819","name":"Intein DOD-type homing endonuclease domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43607","interpro_id":"IPR022878","interpro_name":"V-type ATP synthase catalytic alpha chain","interpro_type":"Family","locations":[{"end":1095,"score":0.0,"start":14}],"model":"PTHR43607:SF1","name":"V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00306","interpro_id":"IPR003587","interpro_name":"Hint domain N-terminal","interpro_type":"Domain","locations":[{"end":400,"score":0.004100000020116568,"start":283}],"model":"SM00306","name":"Hint (Hedgehog/Intein) domain N-terminal region"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47917","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1036,"score":6.280000043045552e-21,"start":956}],"model":"0043649","name":"C-terminal domain of alpha and beta subunits of F1 ATP synthase"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50615","interpro_id":"IPR036121","interpro_name":"ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":93,"score":1.5100000446527893e-14,"start":23}],"model":"0043647","name":"N-terminal domain of alpha and beta subunits of F1 ATP synthase"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51294","interpro_id":"IPR036844","interpro_name":"Hint domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":759,"score":0.0,"start":283}],"model":"0038214","name":"Hedgehog/intein (Hint) domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":293,"score":1.4899999410834012e-17,"start":204},{"end":944,"score":0.0,"start":756}],"model":"0046478","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55608","interpro_id":"IPR027434","interpro_name":"Homing endonuclease","interpro_type":"Homologous_superfamily","locations":[{"end":605,"score":2.4900000545604803e-14,"start":465},{"end":710,"score":1.6999999848254795e-18,"start":608}],"model":"0036397","name":"Homing endonucleases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00081","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":371,"score":1.8276699620400905e-7,"start":285}],"model":"cd00081","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01134","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":941,"score":0.0,"start":761}],"model":"cd01134","name":"V/A-type ATP synthase catalytic subunit A"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18111","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1051,"score":1.2772835502320708e-41,"start":956}],"model":"cd18111","name":"V/A-type ATP synthase catalytic subunit A (alpha), C-terminal domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18119","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":91,"score":2.2260800393912823e-38,"start":25}],"model":"cd18119","name":"V/A-type ATP synthase catalytic subunit A (alpha), N-terminal domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":1701932,"start_pos":1698552,"strand":"reverse"},"low_complexity_region_coords":[[389,402]],"name":"vma1","ortholog_annotations":[{"gene_uniquename":"SJAG_01471","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:851","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01471","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01471","ortholog_taxonid":4932,"ortholog_uniquename":"YDL185W","reference_uniquename":"PMID:29761456"}],"product":"V-type ATPase V1 domain, subunit A","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0055085","GO:0005829","GO:0016788","GO:0051604","GO:0005773","GO:0055086","GO:0016887","GO:0016874","GO:0022857"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000221":null,"GO:0000329":null,"GO:0003677":null,"GO:0004519":null,"GO:0005524":null,"GO:0005829":null,"GO:0012505":null,"GO:0015986":null,"GO:0016539":null,"GO:0016887":null,"GO:0046933":null,"GO:0046961":null,"GO:0090463":null,"GO:0090464":null,"GO:0090465":null,"GO:1902600":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01471.1"],"transcripts_by_uniquename":{"SJAG_01471.1":null},"uniprot_identifier":"B6JY11","uniquename":"SJAG_01471"}


id: SJAG_01472
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77817],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[92191],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77816],"is_not":false,"summary":null,"term":"GO:0034657"},{"annotations":[92193],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["InterPro:IPR001680","InterPro:IPR036322","InterPro:IPR006594","EnsemblGenomes-Gn:SJAG_01472","InterPro:IPR020472","InterPro:IPR017986","InterPro:IPR015943","EnsemblGenomes-Tr:EEB06430","InterPro:IPR006595","UniProtKB/TrEMBL:B6JY12","InterPro:IPR019775"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubx3","uniquename":"SJAG_01467"},{"name":"mrp17","uniquename":"SJAG_01468"},{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"},{"name":"gid7","uniquename":"SJAG_01472"},{"name":"apc11","uniquename":"SJAG_05236"},{"name":"img1","uniquename":"SJAG_01473"},{"name":"erg8","uniquename":"SJAG_01474"},{"name":"slx1","uniquename":"SJAG_05237"},{"name":"taf9","uniquename":"SJAG_01475"}],"genes_by_uniquename":{"HGNC:21208":null,"SJAG_01472":null,"SPAC343.04c":null,"YCL039W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":501,"score":0.0,"start":197}],"model":"6e1zA00","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00400","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":241,"score":0.000050999999075429514,"start":206},{"end":283,"score":0.000014000000192027073,"start":248},{"end":324,"score":0.0012000000569969416,"start":290},{"end":455,"score":0.20000000298023224,"start":418},{"end":498,"score":5.599999894911889e-7,"start":460}],"model":"PF00400","name":"WD domain, G-beta repeat"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00320","interpro_id":"IPR020472","interpro_name":"G-protein beta WD-40 repeat","interpro_type":"Repeat","locations":[{"end":284,"score":0.000048000001697801054,"start":270},{"end":457,"score":0.000048000001697801054,"start":443},{"end":500,"score":0.000048000001697801054,"start":486}],"model":"PR00320","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00678","interpro_id":"IPR019775","interpro_name":"WD40 repeat, conserved site","interpro_type":"Conserved_site","locations":[{"end":284,"score":0.0,"start":270}],"model":"PS00678","name":"Trp-Asp (WD) repeats signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":250,"score":0.0,"start":209},{"end":292,"score":0.0,"start":251},{"end":324,"score":0.0,"start":293},{"end":465,"score":0.0,"start":439},{"end":499,"score":0.0,"start":466}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50294","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":242,"score":0.0,"start":209},{"end":287,"score":0.0,"start":251},{"end":324,"score":0.0,"start":293},{"end":499,"score":0.0,"start":466}],"model":"PS50294","name":"Trp-Asp (WD) repeats circular profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50896","interpro_id":"IPR006594","interpro_name":"LIS1 homology motif","interpro_type":"Domain","locations":[{"end":39,"score":0.0,"start":7}],"model":"PS50896","name":"LIS1 homology (LisH) motif profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50897","interpro_id":"IPR006595","interpro_name":"CTLH, C-terminal LisH motif","interpro_type":"Domain","locations":[{"end":97,"score":0.0,"start":40}],"model":"PS50897","name":"C-terminal to LisH (CTLH) motif profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22838","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":501,"score":0.0,"start":6}],"model":"PTHR22838:SF0","name":"WD REPEAT PROTEIN 26-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":241,"score":1.8000000068241206e-7,"start":202},{"end":283,"score":3.000000106112566e-7,"start":244},{"end":325,"score":1.1000000199601345e-7,"start":286},{"end":370,"score":380.0,"start":327},{"end":411,"score":2.4000000953674316,"start":373},{"end":456,"score":7.099999904632568,"start":414},{"end":499,"score":8.500000148181641e-10,"start":459}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00667","interpro_id":"IPR006594","interpro_name":"LIS1 homology motif","interpro_type":"Domain","locations":[{"end":39,"score":0.0005600000149570405,"start":7}],"model":"SM00667","name":"Lissencephaly type-1-like homology motif"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00668","interpro_id":"IPR006595","interpro_name":"CTLH, C-terminal LisH motif","interpro_type":"Domain","locations":[{"end":97,"score":1.1000000199601345e-7,"start":40}],"model":"SM00668","name":"C-terminal to LisH motif."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":498,"score":0.0,"start":202}],"model":"0053623","name":"WD40 repeat-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00200","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":499,"score":0.0,"start":206}],"model":"cd00200","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":1704470,"start_pos":1702783,"strand":"forward"},"low_complexity_region_coords":[[242,244]],"name":"gid7","ortholog_annotations":[{"gene_uniquename":"SJAG_01472","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21208","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01472","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01472","ortholog_taxonid":4932,"ortholog_uniquename":"YCL039W","reference_uniquename":"PMID:29761456"}],"product":"GID complex WD repeat subunit Gid7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0030163","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0034657":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01472.1"],"transcripts_by_uniquename":{"SJAG_01472.1":null},"uniprot_identifier":"B6JY12","uniquename":"SJAG_01472"}


id: SJAG_01473
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92184],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[92182],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[92185],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01473","InterPro:IPR001857","InterPro:IPR008991","GOA:B6JY14","UniProtKB/TrEMBL:B6JY14","InterPro:IPR038657","EnsemblGenomes-Tr:EEB06432"],"deletion_viability":"unknown","disordered_region_coords":[[53,60],[179,180]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug28","uniquename":"SJAG_01469"},{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"},{"name":"gid7","uniquename":"SJAG_01472"},{"name":"apc11","uniquename":"SJAG_05236"},{"name":"img1","uniquename":"SJAG_01473"},{"name":"erg8","uniquename":"SJAG_01474"},{"name":"slx1","uniquename":"SJAG_05237"},{"name":"taf9","uniquename":"SJAG_01475"},{"name":"rcl1","uniquename":"SJAG_01476"},{"name":"cpn1","uniquename":"SJAG_01477"}],"genes_by_uniquename":{"HGNC:14052":null,"SJAG_01473":null,"SPAC343.02":null,"YCR046C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.790","interpro_id":"IPR038657","interpro_name":"Ribosomal protein L19 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":166,"score":2.4999999718165057e-27,"start":32}],"model":"1vw4M01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01245","interpro_id":"IPR001857","interpro_name":"Ribosomal protein L19","interpro_type":"Family","locations":[{"end":152,"score":1.599999971922672e-12,"start":59}],"model":"PF01245","name":"Ribosomal protein L19"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15680","interpro_id":"IPR001857","interpro_name":"Ribosomal protein L19","interpro_type":"Family","locations":[{"end":156,"score":2.1999999973925744e-17,"start":41}],"model":"PTHR15680:SF9","name":"RIBOSOMAL PROTEIN L19"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50104","interpro_id":"IPR008991","interpro_name":"Translation protein SH3-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":174,"score":3.009999955281865e-24,"start":49}],"model":"0054183","name":"Translation proteins SH3-like domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":1705800,"start_pos":1705258,"strand":"reverse"},"low_complexity_region_coords":[[18,35]],"name":"img1","ortholog_annotations":[{"gene_uniquename":"SJAG_01473","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14052","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01473","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01473","ortholog_taxonid":4932,"ortholog_uniquename":"YCR046C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L19","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005198","GO:0140053","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01473.1"],"transcripts_by_uniquename":{"SJAG_01473.1":null},"uniprot_identifier":"B6JY14","uniquename":"SJAG_01473"}


id: SJAG_01474
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73939],"is_not":false,"summary":null,"term":"GO:0006696"},{"annotations":[73937],"is_not":false,"summary":null,"term":"GO:0010142"},{"annotations":[73935],"is_not":false,"summary":null,"term":"GO:0019287"}],"cellular_component":[{"annotations":[92173],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92174],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[92175],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[73936],"is_not":false,"summary":null,"term":"GO:0005777"}],"molecular_function":[{"annotations":[92180],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[73938],"is_not":false,"summary":null,"term":"GO:0004631"}]},"dbxrefs":["InterPro:IPR006204","GOA:B6JY15","EnsemblGenomes-Gn:SJAG_01474","InterPro:IPR020568","InterPro:IPR013750","InterPro:IPR035102","InterPro:IPR016005","InterPro:IPR014721","InterPro:IPR036554","UniProtKB/TrEMBL:B6JY15","EnsemblGenomes-Tr:EEB06433"],"deletion_viability":"unknown","disordered_region_coords":[[81,83],[187,188],[299,301]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pls1","uniquename":"SJAG_01470"},{"name":"vma1","uniquename":"SJAG_01471"},{"name":"gid7","uniquename":"SJAG_01472"},{"name":"apc11","uniquename":"SJAG_05236"},{"name":"img1","uniquename":"SJAG_01473"},{"name":"erg8","uniquename":"SJAG_01474"},{"name":"slx1","uniquename":"SJAG_05237"},{"name":"taf9","uniquename":"SJAG_01475"},{"name":"rcl1","uniquename":"SJAG_01476"},{"name":"cpn1","uniquename":"SJAG_01477"},{"name":"mrpl6","uniquename":"SJAG_01478"}],"genes_by_uniquename":{"SJAG_01474":null,"SPAC343.01c":null,"YMR220W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.230.10","interpro_id":"IPR014721","interpro_name":"Ribosomal protein S5 domain 2-type fold, subgroup","interpro_type":"Homologous_superfamily","locations":[{"end":286,"score":1.4000372957069247e-41,"start":2}],"model":"3k17A01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.890","interpro_id":"IPR036554","interpro_name":"GHMP kinase, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":422,"score":7.100000032345122e-10,"start":287}],"model":"3k17A02","name":"GHMP kinase, C-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00288","interpro_id":"IPR006204","interpro_name":"GHMP kinase N-terminal domain","interpro_type":"Domain","locations":[{"end":229,"score":1.700000004049157e-13,"start":158}],"model":"PF00288","name":"GHMP kinases N terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08544","interpro_id":"IPR013750","interpro_name":"GHMP kinase, C-terminal domain","interpro_type":"Domain","locations":[{"end":409,"score":2.200000039920269e-7,"start":356}],"model":"PF08544","name":"GHMP kinases C terminal"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF017288","interpro_id":"IPR016005","interpro_name":"Phosphomevalonate kinase Erg8","interpro_type":"Family","locations":[{"end":333,"score":0.0,"start":4},{"end":433,"score":1.0999999658723653e-30,"start":322}],"model":"PIRSF017288","name":"Phosphomevalonate kinase, eukaryotic GHMP type"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR31814","interpro_id":"IPR035102","interpro_name":"Phosphomevalonate kinase","interpro_type":"Family","locations":[{"end":432,"score":0.0,"start":5}],"model":"PTHR31814:SF2","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54211","interpro_id":"IPR020568","interpro_name":"Ribosomal protein S5 domain 2-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":293,"score":2.550000002067715e-27,"start":6}],"model":"0039904","name":"Ribosomal protein S5 domain 2-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":1707492,"start_pos":1706135,"strand":"forward"},"low_complexity_region_coords":[[379,391]],"name":"erg8","ortholog_annotations":[{"gene_uniquename":"SJAG_01474","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC343.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01474","ortholog_taxonid":4932,"ortholog_uniquename":"YMR220W","reference_uniquename":"PMID:29761456"}],"product":"phosphomevalonate kinase Erg8","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016301","GO:0006790","GO:0006629","GO:0055086","GO:0005777","GO:0005829","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004631":null,"GO:0005524":null,"GO:0005634":null,"GO:0005739":null,"GO:0005777":null,"GO:0005829":null,"GO:0006696":null,"GO:0010142":null,"GO:0019287":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01474.1"],"transcripts_by_uniquename":{"SJAG_01474.1":null},"uniprot_identifier":"B6JY15","uniquename":"SJAG_01474"}


id: SJAG_01475
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84129],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[84125],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84127],"is_not":false,"summary":null,"term":"GO:0000124"},{"annotations":[84128],"is_not":false,"summary":null,"term":"GO:0005669"}],"molecular_function":[{"annotations":[84130],"is_not":false,"summary":null,"term":"GO:0016251"},{"annotations":[84131],"is_not":false,"summary":null,"term":"GO:0003713"}]},"dbxrefs":["InterPro:IPR003162","InterPro:IPR009072","UniProtKB/TrEMBL:B6JY17","EnsemblGenomes-Tr:EEB06435","EnsemblGenomes-Gn:SJAG_01475","GOA:B6JY17"],"deletion_viability":"unknown","disordered_region_coords":[[1,7],[52,54],[56,57],[60,62],[67,68],[78,81],[87,100],[106,110],[149,157],[132,131]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gid7","uniquename":"SJAG_01472"},{"name":"apc11","uniquename":"SJAG_05236"},{"name":"img1","uniquename":"SJAG_01473"},{"name":"erg8","uniquename":"SJAG_01474"},{"name":"slx1","uniquename":"SJAG_05237"},{"name":"taf9","uniquename":"SJAG_01475"},{"name":"rcl1","uniquename":"SJAG_01476"},{"name":"cpn1","uniquename":"SJAG_01477"},{"name":"mrpl6","uniquename":"SJAG_01478"},{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"}],"genes_by_uniquename":{"HGNC:11542":null,"HGNC:17306":null,"SJAG_01475":null,"SPAC12G12.05c":null,"YMR236W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.20.10","interpro_id":"IPR009072","interpro_name":"Histone-fold","interpro_type":"Homologous_superfamily","locations":[{"end":81,"score":5.2999998570508184e-24,"start":12}],"model":"1tafA00","name":"Histone, subunit A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02291","interpro_id":"IPR003162","interpro_name":"Transcription initiation factor TAFII31","interpro_type":"Family","locations":[{"end":129,"score":0.0,"start":9}],"model":"PF02291","name":"Transcription initiation factor IID, 31kD subunit"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR48068","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":149,"score":0.0,"start":9}],"model":"PTHR48068:SF4","name":"TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47113","interpro_id":"IPR009072","interpro_name":"Histone-fold","interpro_type":"Homologous_superfamily","locations":[{"end":79,"score":6.770000142083954e-13,"start":12}],"model":"0049583","name":"Histone-fold"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07979","interpro_id":"IPR003162","interpro_name":"Transcription initiation factor TAFII31","interpro_type":"Family","locations":[{"end":128,"score":0.0,"start":12}],"model":"cd07979","name":"TATA Binding Protein (TBP) Associated Factor 9 (TAF9) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex"}],"location":{"chromosome_name":"supercont5.3","end_pos":1709095,"start_pos":1708622,"strand":"reverse"},"low_complexity_region_coords":[[132,148]],"name":"taf9","ortholog_annotations":[{"gene_uniquename":"SJAG_01475","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11542","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01475","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17306","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01475","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12G12.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01475","ortholog_taxonid":4932,"ortholog_uniquename":"YMR236W","reference_uniquename":"PMID:29761456"}],"product":"SAGA complex/transcription factor TFIID complex subunit Taf9","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005694","GO:0140223","GO:0005829","GO:0005654","GO:0003713","GO:0003712","GO:0005634","GO:0006351","GO:0006325","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000124":null,"GO:0003713":null,"GO:0005669":null,"GO:0005829":null,"GO:0016251":null,"GO:0045815":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01475.1"],"transcripts_by_uniquename":{"SJAG_01475.1":null},"uniprot_identifier":"B6JY17","uniquename":"SJAG_01475"}


id: SJAG_01476
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75938],"is_not":false,"summary":null,"term":"GO:0000479"}],"cellular_component":[{"annotations":[75937],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[75936],"is_not":false,"summary":null,"term":"GO:0004521"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01476","InterPro:IPR016443","UniProtKB/TrEMBL:B6JY18","InterPro:IPR036553","InterPro:IPR037136","InterPro:IPR000228","GOA:B6JY18","InterPro:IPR013791","InterPro:IPR013792","EnsemblGenomes-Tr:EEB06436","InterPro:IPR020719","InterPro:IPR023797"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apc11","uniquename":"SJAG_05236"},{"name":"img1","uniquename":"SJAG_01473"},{"name":"erg8","uniquename":"SJAG_01474"},{"name":"slx1","uniquename":"SJAG_05237"},{"name":"taf9","uniquename":"SJAG_01475"},{"name":"rcl1","uniquename":"SJAG_01476"},{"name":"cpn1","uniquename":"SJAG_01477"},{"name":"mrpl6","uniquename":"SJAG_01478"},{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"},{"name":"wdr21","uniquename":"SJAG_01480"}],"genes_by_uniquename":{"HGNC:17687":null,"SJAG_01476":null,"SPAC12G12.06c":null,"YOL010W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.360.20","interpro_id":"IPR036553","interpro_name":"RNA 3'-terminal phosphate cyclase, insert domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":280,"score":0.0,"start":185}],"model":"4clqA02","name":"RNA 3'-terminal phosphate cyclase, insert domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.65.10.20","interpro_id":"IPR037136","interpro_name":"RNA 3'-terminal phosphate cyclase domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":342,"score":0.0,"start":8}],"model":"4clqA01","name":"RNA 3'-terminal phosphate cyclase domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01137","interpro_id":"IPR023797","interpro_name":"RNA 3'-terminal phosphate cyclase domain","interpro_type":"Domain","locations":[{"end":338,"score":0.0,"start":7}],"model":"PF01137","name":"RNA 3'-terminal phosphate cyclase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05189","interpro_id":"IPR013791","interpro_name":"RNA 3'-terminal phosphate cyclase, insert domain","interpro_type":"Domain","locations":[{"end":284,"score":2.3000000270564755e-34,"start":184}],"model":"PF05189","name":"RNA 3'-terminal phosphate cyclase (RTC), insert domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01287","interpro_id":"IPR020719","interpro_name":"RNA 3'-terminal phosphate cyclase-like, conserved site","interpro_type":"Conserved_site","locations":[{"end":167,"score":0.0,"start":157}],"model":"PS01287","name":"RNA 3-terminal phosphate cyclase signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11096","interpro_id":"IPR000228","interpro_name":"RNA 3'-terminal phosphate cyclase","interpro_type":"Family","locations":[{"end":363,"score":0.0,"start":8}],"model":"PTHR11096:SF1","name":"RNA 3' TERMINAL PHOSPHATE CYCLASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55205","interpro_id":"IPR013792","interpro_name":"RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta","interpro_type":"Homologous_superfamily","locations":[{"end":234,"score":0.0,"start":10}],"model":"0042868","name":"EPT/RTPC-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR03400","interpro_id":"IPR016443","interpro_name":"RNA 3'-terminal phosphate cyclase type 2","interpro_type":"Family","locations":[{"end":363,"score":0.0,"start":6}],"model":"TIGR03400","name":"18S rRNA biogenesis protein RCL1"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00875","interpro_id":"IPR016443","interpro_name":"RNA 3'-terminal phosphate cyclase type 2","interpro_type":"Family","locations":[{"end":341,"score":0.0,"start":7}],"model":"cd00875","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":1710545,"start_pos":1709451,"strand":"reverse"},"low_complexity_region_coords":[[97,105]],"name":"rcl1","ortholog_annotations":[{"gene_uniquename":"SJAG_01476","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17687","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01476","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12G12.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01476","ortholog_taxonid":4932,"ortholog_uniquename":"YOL010W","reference_uniquename":"PMID:29761456"}],"product":"rRNA processing protein Rcl1","references_by_uniquename":{"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005730","GO:0140098","GO:0016788","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000479":null,"GO:0004521":null,"GO:0005730":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01476.1"],"transcripts_by_uniquename":{"SJAG_01476.1":null},"uniprot_identifier":"B6JY18","uniquename":"SJAG_01476"}


id: SJAG_01477
data:
  {"coiled_coil_coords":[[70,102]],"cv_annotations":{"cellular_component":[{"annotations":[84135],"is_not":false,"summary":null,"term":"GO:0005829"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY19","EnsemblGenomes-Gn:SJAG_01477","EnsemblGenomes-Tr:EEB06437"],"deletion_viability":"unknown","disordered_region_coords":[[1,23],[36,37],[40,58],[60,61],[103,106],[108,109],[161,172],[174,179],[365,368],[185,230],[245,286],[305,344]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"img1","uniquename":"SJAG_01473"},{"name":"erg8","uniquename":"SJAG_01474"},{"name":"slx1","uniquename":"SJAG_05237"},{"name":"taf9","uniquename":"SJAG_01475"},{"name":"rcl1","uniquename":"SJAG_01476"},{"name":"cpn1","uniquename":"SJAG_01477"},{"name":"mrpl6","uniquename":"SJAG_01478"},{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"},{"name":"wdr21","uniquename":"SJAG_01480"},{"name":"miy1","uniquename":"SJAG_01481"}],"genes_by_uniquename":{"HGNC:6743":null,"SJAG_01477":null,"SPAC12G12.07c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1712145,"start_pos":1710957,"strand":"reverse"},"low_complexity_region_coords":[[30,39],[231,244],[287,304],[345,364]],"name":"cpn1","ortholog_annotations":[{"gene_uniquename":"SJAG_01477","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6743","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01477","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12G12.07c","reference_uniquename":"PMID:21511999"}],"product":"caprin, Cpn1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01477.1"],"transcripts_by_uniquename":{"SJAG_01477.1":null},"uniprot_identifier":"B6JY19","uniquename":"SJAG_01477"}


id: SJAG_01478
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84137],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[76838],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[84138],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[76837],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR020040","InterPro:IPR036789","UniProtKB/TrEMBL:B6JY20","EnsemblGenomes-Tr:EEB06438","InterPro:IPR002358","GOA:B6JY20","InterPro:IPR000702","InterPro:IPR019906","EnsemblGenomes-Gn:SJAG_01478"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erg8","uniquename":"SJAG_01474"},{"name":"slx1","uniquename":"SJAG_05237"},{"name":"taf9","uniquename":"SJAG_01475"},{"name":"rcl1","uniquename":"SJAG_01476"},{"name":"cpn1","uniquename":"SJAG_01477"},{"name":"mrpl6","uniquename":"SJAG_01478"},{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"},{"name":"wdr21","uniquename":"SJAG_01480"},{"name":"miy1","uniquename":"SJAG_01481"},{"uniquename":"SJAG_01482"}],"genes_by_uniquename":{"SJAG_01478":null,"SPAC12G12.08":null,"YHR147C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.930.12","interpro_id":"IPR036789","interpro_name":"Ribosomal protein L6, alpha-beta domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":90,"score":1.0999999780167719e-18,"start":6},{"end":187,"score":2.500000068113003e-28,"start":92}],"model":"4btdH01","name":"Ribosomal protein L6, alpha-beta domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00347","interpro_id":"IPR020040","interpro_name":"Ribosomal protein L6, alpha-beta domain","interpro_type":"Domain","locations":[{"end":90,"score":6.099999723119254e-7,"start":17},{"end":176,"score":9.199999703030093e-13,"start":99}],"model":"PF00347","name":"Ribosomal protein L6"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF002162","interpro_id":"IPR000702","interpro_name":"Ribosomal protein L6","interpro_type":"Family","locations":[{"end":187,"score":9.80908925027372e-45,"start":5}],"model":"PIRSF002162","name":"Ribosomal protein, L6p/L6a/L9e/organellar L9 types"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00059","interpro_id":"IPR019906","interpro_name":"Ribosomal protein L6, bacterial-type","interpro_type":"Family","locations":[{"end":105,"score":8.599999727083494e-20,"start":80},{"end":129,"score":8.599999727083494e-20,"start":113},{"end":176,"score":8.599999727083494e-20,"start":155}],"model":"PR00059","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00525","interpro_id":"IPR002358","interpro_name":"Ribosomal protein L6, conserved site","interpro_type":"Conserved_site","locations":[{"end":176,"score":0.0,"start":168}],"model":"PS00525","name":"Ribosomal protein L6 signature 1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11655","interpro_id":"IPR000702","interpro_name":"Ribosomal protein L6","interpro_type":"Family","locations":[{"end":184,"score":1.2999999996372404e-39,"start":8}],"model":"PTHR11655:SF14","name":"60S/50S RIBOSOMAL PROTEIN L6/L9"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56053","interpro_id":"IPR036789","interpro_name":"Ribosomal protein L6, alpha-beta domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":90,"score":1.959999935112087e-15,"start":7},{"end":186,"score":1.399999953402364e-25,"start":93}],"model":"0054598","name":"Ribosomal protein L6"}],"location":{"chromosome_name":"supercont5.3","end_pos":1712969,"start_pos":1712406,"strand":"forward"},"name":"mrpl6","ortholog_annotations":[{"gene_uniquename":"SJAG_01478","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12G12.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01478","ortholog_taxonid":4932,"ortholog_uniquename":"YHR147C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L6","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0140053","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0019843":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01478.1"],"transcripts_by_uniquename":{"SJAG_01478.1":null},"uniprot_identifier":"B6JY20","uniquename":"SJAG_01478"}


id: SJAG_01479
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[84141],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[84142],"is_not":false,"summary":null,"term":"GO:0005829"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY21","EnsemblGenomes-Gn:SJAG_01479","EnsemblGenomes-Tr:EEB06439"],"deletion_viability":"unknown","disordered_region_coords":[[366,368],[392,416],[371,374]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"taf9","uniquename":"SJAG_01475"},{"name":"rcl1","uniquename":"SJAG_01476"},{"name":"cpn1","uniquename":"SJAG_01477"},{"name":"mrpl6","uniquename":"SJAG_01478"},{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"},{"name":"wdr21","uniquename":"SJAG_01480"},{"name":"miy1","uniquename":"SJAG_01481"},{"uniquename":"SJAG_01482"},{"name":"spo2","uniquename":"SJAG_01483"},{"name":"vps1302","uniquename":"SJAG_16459"}],"genes_by_uniquename":{"SJAG_01479":null,"SPAC12G12.09":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1715529,"start_pos":1713868,"strand":"forward"},"low_complexity_region_coords":[[62,73],[375,391],[419,430],[470,488]],"name":"eti1","ortholog_annotations":[{"gene_uniquename":"SJAG_01479","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12G12.09"}],"product":"WD repeat protein associated with stress granule","references_by_uniquename":{"GO_REF:0000107":null},"subset_termids":["GO:0005829","GO:0010494"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0010494":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01479.1"],"transcripts_by_uniquename":{"SJAG_01479.1":null},"uniprot_identifier":"B6JY21","uniquename":"SJAG_01479"}


id: SJAG_01480
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84147],"is_not":false,"summary":null,"term":"GO:0006283"}],"cellular_component":[{"annotations":[75368],"is_not":false,"summary":null,"term":"GO:0080008"},{"annotations":[84144],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84145],"is_not":false,"summary":null,"term":"GO:0070913"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06440","InterPro:IPR015943","InterPro:IPR036322","UniProtKB/TrEMBL:B6JY22","EnsemblGenomes-Gn:SJAG_01480"],"deletion_viability":"unknown","disordered_region_coords":[[20,27],[29,76],[103,117],[402,403]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rcl1","uniquename":"SJAG_01476"},{"name":"cpn1","uniquename":"SJAG_01477"},{"name":"mrpl6","uniquename":"SJAG_01478"},{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"},{"name":"wdr21","uniquename":"SJAG_01480"},{"name":"miy1","uniquename":"SJAG_01481"},{"uniquename":"SJAG_01482"},{"name":"spo2","uniquename":"SJAG_01483"},{"name":"vps1302","uniquename":"SJAG_16459"},{"name":"rsa1","uniquename":"SJAG_05679"}],"genes_by_uniquename":{"HGNC:20229":null,"HGNC:26657":null,"HGNC:27723":null,"SJAG_01480":null,"SPAC12G12.10":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":383,"score":9.999999960041972e-12,"start":87}],"model":"5teeA02","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR44472","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":426,"score":0.0,"start":1}],"model":"PTHR44472:SF1","name":"DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":400,"score":2.019999937447319e-15,"start":162}],"model":"0047024","name":"WD40 repeat-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":1717209,"start_pos":1715926,"strand":"forward"},"name":"wdr21","ortholog_annotations":[{"gene_uniquename":"SJAG_01480","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20229","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01480","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26657","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01480","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:27723","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01480","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12G12.10","reference_uniquename":"PMID:21511999"}],"product":"WD repeat protein, human DDB1 and CUL4-associated factor 4 ortholog Wdr21","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0006281","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0006283":null,"GO:0070913":null,"GO:0080008":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01480.1"],"transcripts_by_uniquename":{"SJAG_01480.1":null},"uniprot_identifier":"B6JY22","uniquename":"SJAG_01480"}


id: SJAG_01481
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[84148],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84149],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[84150],"is_not":false,"summary":null,"term":"GO:0004843"},{"annotations":[84151],"is_not":false,"summary":null,"term":"GO:1990380"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY23","GOA:B6JY23","InterPro:IPR007518","EnsemblGenomes-Tr:EEB06441","EnsemblGenomes-Gn:SJAG_01481","InterPro:IPR033979"],"deletion_viability":"unknown","disordered_region_coords":[[5,10],[314,315],[319,372]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cpn1","uniquename":"SJAG_01477"},{"name":"mrpl6","uniquename":"SJAG_01478"},{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"},{"name":"wdr21","uniquename":"SJAG_01480"},{"name":"miy1","uniquename":"SJAG_01481"},{"uniquename":"SJAG_01482"},{"name":"spo2","uniquename":"SJAG_01483"},{"name":"vps1302","uniquename":"SJAG_16459"},{"name":"rsa1","uniquename":"SJAG_05679"},{"name":"dbl6","uniquename":"SJAG_01486"}],"genes_by_uniquename":{"HGNC:25648":null,"HGNC:26954":null,"SJAG_01481":null,"SPAC12G12.11c":null,"YGL082W":null,"YPL191C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04424","interpro_id":"IPR033979","interpro_name":"MINDY deubiquitinase domain","interpro_type":"Domain","locations":[{"end":163,"score":3.90000011452063e-11,"start":61}],"model":"PF04424","name":"MINDY deubiquitinase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR18063","interpro_id":"IPR007518","interpro_name":"MINDY deubiquitinase","interpro_type":"Family","locations":[{"end":357,"score":0.0,"start":16}],"model":"PTHR18063:SF6","name":"NF-E2 INDUCIBLE PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":1718500,"start_pos":1717259,"strand":"reverse"},"low_complexity_region_coords":[[11,23],[189,206]],"name":"miy1","ortholog_annotations":[{"gene_uniquename":"SJAG_01481","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25648","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01481","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26954","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01481","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12G12.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01481","ortholog_taxonid":4932,"ortholog_uniquename":"YGL082W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01481","ortholog_taxonid":4932,"ortholog_uniquename":"YPL191C","reference_uniquename":"PMID:29761456"}],"product":"Lys48-specific deubiquitinase Mindy family, Miy1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0140096","GO:0008233"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004843":null,"GO:0005634":null,"GO:0005829":null,"GO:1990380":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01481.1"],"transcripts_by_uniquename":{"SJAG_01481.1":null},"uniprot_identifier":"B6JY23","uniquename":"SJAG_01481"}


id: SJAG_01482
data:
  {"cv_annotations":{"biological_process":[{"annotations":[99494],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[99492],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73373],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[99495],"is_not":false,"summary":null,"term":"GO:0051213"},{"annotations":[73372],"is_not":false,"summary":null,"term":"GO:0016279"}]},"dbxrefs":["InterPro:IPR001214","GOA:B6JY24","EnsemblGenomes-Tr:EEB06442","EnsemblGenomes-Gn:SJAG_01482","UniProtKB/TrEMBL:B6JY24"],"deletion_viability":"unknown","disordered_region_coords":[[82,83],[85,86]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl6","uniquename":"SJAG_01478"},{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"},{"name":"wdr21","uniquename":"SJAG_01480"},{"name":"miy1","uniquename":"SJAG_01481"},{"uniquename":"SJAG_01482"},{"name":"spo2","uniquename":"SJAG_01483"},{"name":"vps1302","uniquename":"SJAG_16459"},{"name":"rsa1","uniquename":"SJAG_05679"},{"name":"dbl6","uniquename":"SJAG_01486"},{"name":"tma22","uniquename":"SJAG_01487"}],"genes_by_uniquename":{"HGNC:26116":null,"SJAG_01482":null,"SPBC16C6.01c":null,"YBR030W":null,"YDR257C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1410.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":285,"score":0.0,"start":6}],"model":"2h21C01","name":"set domain protein methyltransferase, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00856","interpro_id":"IPR001214","interpro_name":"SET domain","interpro_type":"Domain","locations":[{"end":271,"score":2.4000000848900527e-6,"start":36}],"model":"PF00856","name":"SET domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50280","interpro_id":"IPR001214","interpro_name":"SET domain","interpro_type":"Domain","locations":[{"end":271,"score":0.0,"start":25}],"model":"PS50280","name":"SET domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13271","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":369,"score":3.2000000163538035e-37,"start":7}],"model":"PTHR13271:SF131","name":"UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82199","interpro_id":"IPR046341","interpro_name":"SET domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":286,"score":0.0,"start":7}],"model":"0040998","name":"SET domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd10527","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":285,"score":0.0,"start":27}],"model":"cd10527","name":"SET domain found in Rubisco large subunit methyltransferase (LSMT) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1720511,"start_pos":1718943,"strand":"reverse"},"low_complexity_region_coords":[[78,93],[97,109]],"ortholog_annotations":[{"gene_uniquename":"SJAG_01482","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26116","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01482","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16C6.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01482","ortholog_taxonid":4932,"ortholog_uniquename":"YBR030W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01482","ortholog_taxonid":4932,"ortholog_uniquename":"YDR257C","reference_uniquename":"PMID:29761456"}],"product":"ribosomal lysine methyltransferase, human SETD6 ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0016741","GO:0042254","GO:0005634","GO:0140096","GO:0016491","GO:0005829","GO:0008276"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0016279":null,"GO:0042254":null,"GO:0051213":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01482.1"],"transcripts_by_uniquename":{"SJAG_01482.1":null},"uniprot_identifier":"B6JY24","uniquename":"SJAG_01482"}


id: SJAG_01483
data:
  {"coiled_coil_coords":[[40,60],[111,131]],"cv_annotations":{"biological_process":[{"annotations":[99581],"is_not":false,"summary":null,"term":"GO:0031322"}],"cellular_component":[{"annotations":[99579],"is_not":false,"summary":null,"term":"GO:0035974"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06443","EnsemblGenomes-Gn:SJAG_01483","UniProtKB/TrEMBL:B6JY25"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nce101","uniquename":"SJAG_07004"},{"name":"eti1","uniquename":"SJAG_01479"},{"name":"wdr21","uniquename":"SJAG_01480"},{"name":"miy1","uniquename":"SJAG_01481"},{"uniquename":"SJAG_01482"},{"name":"spo2","uniquename":"SJAG_01483"},{"name":"vps1302","uniquename":"SJAG_16459"},{"name":"rsa1","uniquename":"SJAG_05679"},{"name":"dbl6","uniquename":"SJAG_01486"},{"name":"tma22","uniquename":"SJAG_01487"},{"name":"vps10","uniquename":"SJAG_01488"}],"genes_by_uniquename":{"SJAG_01483":null,"SPBC16C6.14":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1721814,"start_pos":1721389,"strand":"reverse"},"name":"spo2","ortholog_annotations":[{"gene_uniquename":"SJAG_01483","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16C6.14","reference_uniquename":"PMID:21511999"}],"product":"sporulation specific protein Spo2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0000226","GO:0030437","GO:0015630","GO:0005816"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0031322":null,"GO:0035974":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01483.1"],"transcripts_by_uniquename":{"SJAG_01483.1":null},"uniprot_identifier":"B6JY25","uniquename":"SJAG_01483"}


id: SJAG_01486
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[99509],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[99510],"is_not":false,"summary":null,"term":"GO:0035861"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01486","InterPro:IPR038852","UniProtKB/TrEMBL:B6JY27","EnsemblGenomes-Tr:EEB06445"],"deletion_viability":"unknown","disordered_region_coords":[[1,42],[75,75],[77,80],[103,114],[116,117],[122,123],[152,156],[159,163],[169,170],[172,187],[189,191],[221,222],[225,228],[234,238],[251,279],[310,311],[337,347],[90,94]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"miy1","uniquename":"SJAG_01481"},{"uniquename":"SJAG_01482"},{"name":"spo2","uniquename":"SJAG_01483"},{"name":"vps1302","uniquename":"SJAG_16459"},{"name":"rsa1","uniquename":"SJAG_05679"},{"name":"dbl6","uniquename":"SJAG_01486"},{"name":"tma22","uniquename":"SJAG_01487"},{"name":"vps10","uniquename":"SJAG_01488"},{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"}],"genes_by_uniquename":{"SJAG_01486":null,"SPBC16C6.04":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1733822,"start_pos":1732731,"strand":"forward"},"low_complexity_region_coords":[[60,74],[95,102],[140,151],[239,250],[320,336],[337,348]],"name":"dbl6","ortholog_annotations":[{"gene_uniquename":"SJAG_01486","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16C6.04","reference_uniquename":"PMID:21511999"}],"product":"double strand break localizing protein Dbl6, implicated in DNA repair","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0035861":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01486.1"],"transcripts_by_uniquename":{"SJAG_01486.1":null},"uniprot_identifier":"B6JY27","uniquename":"SJAG_01486"}


id: SJAG_01487
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73260],"is_not":false,"summary":null,"term":"GO:0001731"},{"annotations":[73261],"is_not":false,"summary":null,"term":"GO:0002188"}],"cellular_component":[{"annotations":[99511],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[73259],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[99515],"is_not":false,"summary":null,"term":"GO:0003743"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06446","InterPro:IPR001950","EnsemblGenomes-Gn:SJAG_01487","InterPro:IPR005873","GOA:B6JY28","InterPro:IPR036877","UniProtKB/TrEMBL:B6JY28"],"deletion_viability":"unknown","disordered_region_coords":[[74,75],[176,177]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01482"},{"name":"spo2","uniquename":"SJAG_01483"},{"name":"vps1302","uniquename":"SJAG_16459"},{"name":"rsa1","uniquename":"SJAG_05679"},{"name":"dbl6","uniquename":"SJAG_01486"},{"name":"tma22","uniquename":"SJAG_01487"},{"name":"vps10","uniquename":"SJAG_01488"},{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"}],"genes_by_uniquename":{"HGNC:2769":null,"SJAG_01487":null,"SPBC16C6.05":null,"YJR014W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.780.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":176,"score":1.2000000136174153e-18,"start":52}],"model":"2if1A00","name":"SUI1-like domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01253","interpro_id":"IPR001950","interpro_name":"SUI1 domain","interpro_type":"Domain","locations":[{"end":164,"score":1.300000039524536e-20,"start":92}],"model":"PF01253","name":"Translation initiation factor SUI1"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50296","interpro_id":"IPR001950","interpro_name":"SUI1 domain","interpro_type":"Domain","locations":[{"end":165,"score":0.0,"start":94}],"model":"PS50296","name":"Translation initiation factor SUI1 family profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12789","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":183,"score":0.0,"start":4}],"model":"PTHR12789:SF0","name":"DENSITY-REGULATED PROTEIN HOMOLOG"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55159","interpro_id":"IPR036877","interpro_name":"SUI1 domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":176,"score":4.969999925482286e-28,"start":21}],"model":"0045333","name":"eIF1-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01159","interpro_id":"IPR005873","interpro_name":"DENR family, eukaryotes","interpro_type":"Family","locations":[{"end":176,"score":6.099992345052361e-41,"start":12}],"model":"TIGR01159","name":"density-regulated protein DRP1 (Provisional)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd11607","interpro_id":"IPR046447","interpro_name":"DENR, C-terminal domain","interpro_type":"Domain","locations":[{"end":177,"score":5.571239834989292e-38,"start":92}],"model":"cd11607","name":"C-terminal domain of DENR and related proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1734902,"start_pos":1734294,"strand":"forward"},"low_complexity_region_coords":[[76,89],[93,111],[121,132]],"name":"tma22","ortholog_annotations":[{"gene_uniquename":"SJAG_01487","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2769","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01487","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16C6.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01487","ortholog_taxonid":4932,"ortholog_uniquename":"YJR014W","reference_uniquename":"PMID:29761456"}],"product":"translation machinery associated protein ortholog Tma22","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0002181","GO:0065003","GO:0045182"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001731":null,"GO:0002188":null,"GO:0003729":null,"GO:0003743":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01487.1"],"transcripts_by_uniquename":{"SJAG_01487.1":null},"uniprot_identifier":"B6JY28","uniquename":"SJAG_01487"}


id: SJAG_01488
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76729],"is_not":false,"summary":null,"term":"GO:0006895"},{"annotations":[76730],"is_not":false,"summary":null,"term":"GO:0006896"},{"annotations":[76728],"is_not":false,"summary":null,"term":"GO:0006623"}],"cellular_component":[{"annotations":[66692],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[99517],"is_not":false,"summary":null,"term":"GO:0005770"},{"annotations":[99518],"is_not":false,"summary":null,"term":"GO:0016020"},{"annotations":[99519],"is_not":false,"summary":null,"term":"GO:0005802"}],"molecular_function":[{"annotations":[99523],"is_not":false,"summary":null,"term":"GO:0005048"}]},"dbxrefs":["InterPro:IPR015943","GOA:B6JY29","InterPro:IPR031778","InterPro:IPR006581","EnsemblGenomes-Tr:EEB06447","InterPro:IPR031777","EnsemblGenomes-Gn:SJAG_01488","UniProtKB/Swiss-Prot:B6JY29"],"deletion_viability":"unknown","disordered_region_coords":[[1336,1338]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spo2","uniquename":"SJAG_01483"},{"name":"vps1302","uniquename":"SJAG_16459"},{"name":"rsa1","uniquename":"SJAG_05679"},{"name":"dbl6","uniquename":"SJAG_01486"},{"name":"tma22","uniquename":"SJAG_01487"},{"name":"vps10","uniquename":"SJAG_01488"},{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"}],"genes_by_uniquename":{"HGNC:11185":null,"HGNC:11186":null,"HGNC:16698":null,"HGNC:16699":null,"SJAG_01488":null,"SPBC16C6.06":null,"YBL017C":null,"YIL173W":null,"YJL222W":null,"YNR065C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.10.70.80","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":607,"score":7.700000423938036e-6,"start":546},{"end":1260,"score":4.800000041882413e-8,"start":1208}],"model":"3f6kA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":153,"score":1.0000000116860974e-7,"start":23}],"model":"2cn3A01","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.60.270","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1342,"score":5.200000114154174e-17,"start":1261}],"model":"3wsxA03","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF15901","interpro_id":"IPR031777","interpro_name":"Sortilin, C-terminal","interpro_type":"Domain","locations":[{"end":676,"score":6.999999901826916e-28,"start":519},{"end":1333,"score":2.699993855091771e-40,"start":1167}],"model":"PF15901","name":"Sortilin, neurotensin receptor 3, C-terminal"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF15902","interpro_id":"IPR031778","interpro_name":"Sortilin, N-terminal","interpro_type":"Domain","locations":[{"end":508,"score":0.0,"start":59},{"end":1165,"score":0.0,"start":721}],"model":"PF15902","name":"Sortilin, neurotensin receptor 3,"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12106","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1395,"score":0.0,"start":689}],"model":"PTHR12106:SF27","name":"SORTILIN RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00602","interpro_id":"IPR006581","interpro_name":"VPS10","interpro_type":"Domain","locations":[{"end":681,"score":0.0,"start":49},{"end":1338,"score":0.0,"start":711}],"model":"SM00602","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF110296","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":502,"score":1.8299999757104153e-28,"start":39},{"end":1197,"score":1.1199999972039366e-34,"start":716}],"model":"0043715","name":"Oligoxyloglucan reducing end-specific cellobiohydrolase"}],"location":{"chromosome_name":"supercont5.3","end_pos":1739888,"start_pos":1735518,"strand":"forward"},"low_complexity_region_coords":[[52,57],[288,299],[663,670]],"name":"vps10","ortholog_annotations":[{"gene_uniquename":"SJAG_01488","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11185","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01488","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11186","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01488","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16698","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01488","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16699","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01488","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16C6.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01488","ortholog_taxonid":4932,"ortholog_uniquename":"YBL017C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01488","ortholog_taxonid":4932,"ortholog_uniquename":"YIL173W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01488","ortholog_taxonid":4932,"ortholog_uniquename":"YJL222W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01488","ortholog_taxonid":4932,"ortholog_uniquename":"YNR065C","reference_uniquename":"PMID:29761456"}],"product":"sorting receptor for vacuolar proteins, Vps10","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0016192","GO:0006605","GO:0005048","GO:0005794","GO:0031410","GO:0005768","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005048":null,"GO:0005770":null,"GO:0005802":null,"GO:0005829":null,"GO:0006623":null,"GO:0006895":null,"GO:0006896":null,"GO:0016020":null},"tm_domain_coords":[[5,22],[1349,1371]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01488.1"],"transcripts_by_uniquename":{"SJAG_01488.1":null},"uniprot_identifier":"B6JY29","uniquename":"SJAG_01488"}


id: SJAG_01489
data:
  {"cv_annotations":{"biological_process":[{"annotations":[68502],"is_not":false,"summary":null,"term":"GO:1901800"},{"annotations":[99527],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[99524],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[99525],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[99526],"is_not":false,"summary":null,"term":"GO:0008540"}],"molecular_function":[{"annotations":[99528],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[99529],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[99530],"is_not":false,"summary":null,"term":"GO:0036402"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06448","InterPro:IPR003593","InterPro:IPR005937","InterPro:IPR003959","InterPro:IPR027417","EnsemblGenomes-Gn:SJAG_01489","GOA:B6JY30","InterPro:IPR003960","InterPro:IPR035245","UniProtKB/TrEMBL:B6JY30"],"deletion_viability":"unknown","disordered_region_coords":[[32,34],[61,62],[90,91],[94,103],[138,141],[164,166],[168,169],[1,12]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps1302","uniquename":"SJAG_16459"},{"name":"rsa1","uniquename":"SJAG_05679"},{"name":"dbl6","uniquename":"SJAG_01486"},{"name":"tma22","uniquename":"SJAG_01487"},{"name":"vps10","uniquename":"SJAG_01488"},{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"}],"genes_by_uniquename":{"HGNC:9548":null,"SJAG_01489":null,"SPBC16C6.07c":null,"YKL145W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":427,"score":5.199999834980717e-21,"start":350}],"model":"2ce7D02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.140","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":168,"score":3.6000000210455264e-26,"start":42}],"model":"2wg6D00","name":"Nucleic acid-binding proteins"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":348,"score":0.0,"start":169}],"model":"3h4mA01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00004","interpro_id":"IPR003959","interpro_name":"ATPase, AAA-type, core","interpro_type":"Domain","locations":[{"end":348,"score":2.1999993526329617e-39,"start":216}],"model":"PF00004","name":"ATPase family associated with various cellular activities (AAA)"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00674","interpro_id":"IPR003960","interpro_name":"ATPase, AAA-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":337,"score":0.0,"start":319}],"model":"PS00674","name":"AAA-protein family signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23073","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":425,"score":0.0,"start":16}],"model":"PTHR23073:SF13","name":"26S PROTEASOME REGULATORY SUBUNIT"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00382","interpro_id":"IPR003593","interpro_name":"AAA+ ATPase domain","interpro_type":"Domain","locations":[{"end":351,"score":6.4999997937258965e-22,"start":212}],"model":"SM00382","name":"ATPases associated with a variety of cellular activities"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":426,"score":0.0,"start":174}],"model":"0042094","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd19502","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":347,"score":0.0,"start":177}],"model":"cd19502","name":"proteasome activating nucleotidase PAN and related proteasome subunits"}],"location":{"chromosome_name":"supercont5.3","end_pos":1741647,"start_pos":1740034,"strand":"reverse"},"low_complexity_region_coords":[[13,31],[189,204],[282,296]],"name":"rpt1","ortholog_annotations":[{"gene_uniquename":"SJAG_01489","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9548","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01489","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16C6.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01489","ortholog_taxonid":4932,"ortholog_uniquename":"YKL145W","reference_uniquename":"PMID:29761456"}],"product":"19S proteasome base subcomplex ATPase subunit Rpt1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016887","GO:0005634","GO:0005829","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0008540":null,"GO:0016887":null,"GO:0036402":null,"GO:0043161":null,"GO:1901800":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01489.1"],"transcripts_by_uniquename":{"SJAG_01489.1":null},"uniprot_identifier":"B6JY30","uniquename":"SJAG_01489"}


id: SJAG_01490
data:
  {"coiled_coil_coords":[[85,105]],"cv_annotations":{"biological_process":[{"annotations":[99533],"is_not":false,"summary":null,"term":"GO:0006122"}],"cellular_component":[{"annotations":[99531],"is_not":false,"summary":null,"term":"GO:0005750"}],"molecular_function":[{"annotations":[99534],"is_not":false,"summary":null,"term":"GO:0008121"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY31","GOA:B6JY31","EnsemblGenomes-Gn:SJAG_01490","EnsemblGenomes-Tr:EEB06449","InterPro:IPR003422","InterPro:IPR023184","InterPro:IPR036811"],"deletion_viability":"unknown","disordered_region_coords":[[211,212],[239,253],[13,84],[106,105],[117,116],[138,157]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rsa1","uniquename":"SJAG_05679"},{"name":"dbl6","uniquename":"SJAG_01486"},{"name":"tma22","uniquename":"SJAG_01487"},{"name":"vps10","uniquename":"SJAG_01488"},{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"}],"genes_by_uniquename":{"HGNC:12590":null,"SJAG_01490":null,"SPBC16C6.08c":null,"YFR033C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.20","interpro_id":"IPR036811","interpro_name":"Ubiquinol-cytochrome C reductase hinge domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":279,"score":9.999999682655225e-22,"start":199}],"model":"1pp9H00","name":"Ubiquinol-cytochrome C reductase hinge domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02320","interpro_id":"IPR023184","interpro_name":"Ubiquinol-cytochrome C reductase hinge domain","interpro_type":"Domain","locations":[{"end":279,"score":2.2999999270107018e-20,"start":213}],"model":"PF02320","name":"Ubiquinol-cytochrome C reductase hinge protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15336","interpro_id":"IPR003422","interpro_name":"Cytochrome b-c1 complex, subunit 6","interpro_type":"Family","locations":[{"end":279,"score":1.4000000431949738e-13,"start":180}],"model":"PTHR15336:SF0","name":"UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF81531","interpro_id":"IPR036811","interpro_name":"Ubiquinol-cytochrome C reductase hinge domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":279,"score":1.6999999460513883e-20,"start":201}],"model":"0040340","name":"Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)"}],"location":{"chromosome_name":"supercont5.3","end_pos":1743188,"start_pos":1742128,"strand":"reverse"},"low_complexity_region_coords":[[106,116],[117,137],[158,210]],"name":"qcr6","ortholog_annotations":[{"gene_uniquename":"SJAG_01490","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12590","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01490","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16C6.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01490","ortholog_taxonid":4932,"ortholog_uniquename":"YFR033C","reference_uniquename":"PMID:29761456"}],"product":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016491","GO:0022857","GO:0006091","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005750":null,"GO:0006122":null,"GO:0008121":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01490.1"],"transcripts_by_uniquename":{"SJAG_01490.1":null},"uniprot_identifier":"B6JY31","uniquename":"SJAG_01490"}


id: SJAG_01491
data:
  {"cv_annotations":{"biological_process":[{"annotations":[99538],"is_not":false,"summary":null,"term":"GO:0000032"},{"annotations":[99539],"is_not":false,"summary":null,"term":"GO:0035269"}],"cellular_component":[{"annotations":[99537],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[74425],"is_not":false,"summary":null,"term":"GO:0004169"}]},"dbxrefs":["InterPro:IPR003342","EnsemblGenomes-Tr:EEB06450","EnsemblGenomes-Gn:SJAG_01491","InterPro:IPR032421","GOA:B6JY32","InterPro:IPR027005","UniProtKB/TrEMBL:B6JY32","InterPro:IPR016093","InterPro:IPR036300"],"deletion_viability":"unknown","disordered_region_coords":[[3,19],[21,33],[38,43],[380,381],[407,408],[443,453],[507,514]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dbl6","uniquename":"SJAG_01486"},{"name":"tma22","uniquename":"SJAG_01487"},{"name":"vps10","uniquename":"SJAG_01488"},{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"}],"genes_by_uniquename":{"HGNC:9202":null,"SJAG_01491":null,"SPBC16C6.09":null,"YDR307W":null,"YJR143C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.80.10.50","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":537,"score":8.688050478813866e-44,"start":337}],"model":"3malA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02366","interpro_id":"IPR003342","interpro_name":"Glycosyl transferase family 39/83","interpro_type":"Domain","locations":[{"end":312,"score":0.0,"start":67}],"model":"PF02366","name":"Dolichyl-phosphate-mannose-protein mannosyltransferase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02815","interpro_id":"IPR016093","interpro_name":"MIR motif","interpro_type":"Domain","locations":[{"end":526,"score":1.2000000467046398e-16,"start":358}],"model":"PF02815","name":"MIR domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16192","interpro_id":"IPR032421","interpro_name":"Protein O-mannosyl-transferase, C-terminal four TM domain","interpro_type":"Domain","locations":[{"end":771,"score":0.0,"start":552}],"model":"PF16192","name":"C-terminal four TMM region of protein-O-mannosyltransferase"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50919","interpro_id":"IPR016093","interpro_name":"MIR motif","interpro_type":"Domain","locations":[{"end":399,"score":0.0,"start":339},{"end":531,"score":0.0,"start":475}],"model":"PS50919","name":"MIR domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10050","interpro_id":"IPR027005","interpro_name":"Glycosyltransferase 39-like","interpro_type":"Family","locations":[{"end":775,"score":0.0,"start":26}],"model":"PTHR10050:SF51","name":"DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00472","interpro_id":"IPR016093","interpro_name":"MIR motif","interpro_type":"Domain","locations":[{"end":399,"score":2.399999957884008e-13,"start":339},{"end":467,"score":68.0,"start":411},{"end":531,"score":1.600000023841858,"start":475}],"model":"SM00472","name":"Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82109","interpro_id":"IPR036300","interpro_name":"Mir domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":531,"score":0.0,"start":342}],"model":"0049575","name":"MIR domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":1746139,"start_pos":1743794,"strand":"forward"},"low_complexity_region_coords":[[114,125],[726,741]],"name":"ogm4","ortholog_annotations":[{"gene_uniquename":"SJAG_01491","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9202","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01491","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16C6.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01491","ortholog_taxonid":4932,"ortholog_uniquename":"YDR307W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01491","ortholog_taxonid":4932,"ortholog_uniquename":"YJR143C","reference_uniquename":"PMID:29761456"}],"product":"ER membrane O-mannosyltransferase Ogm4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0016757","GO:0006486","GO:0005789","GO:0071554","GO:0005783","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000032":null,"GO:0004169":null,"GO:0005789":null,"GO:0035269":null},"tm_domain_coords":[[105,127],[147,169],[176,193],[198,220],[227,246],[250,272],[285,307],[609,631],[651,668],[673,695],[730,752]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01491.1"],"transcripts_by_uniquename":{"SJAG_01491.1":null},"uniprot_identifier":"B6JY32","uniquename":"SJAG_01491"}


id: SJAG_01492
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[93872],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[75531],"is_not":false,"summary":null,"term":"GO:0016491"}]},"dbxrefs":["InterPro:IPR002347","InterPro:IPR036291","UniProtKB/TrEMBL:B6JY33","EnsemblGenomes-Tr:EEB06451","EnsemblGenomes-Gn:SJAG_01492","GOA:B6JY33","InterPro:IPR020904"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tma22","uniquename":"SJAG_01487"},{"name":"vps10","uniquename":"SJAG_01488"},{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"}],"genes_by_uniquename":{"HGNC:21524":null,"HGNC:24547":null,"HGNC:32423":null,"SJAG_01492":null,"SPAC521.03":null,"YMR226C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.720","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":259,"score":0.0,"start":1}],"model":"3rkuA00","name":"NAD(P)-binding Rossmann-like Domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00106","interpro_id":"IPR002347","interpro_name":"Short-chain dehydrogenase/reductase SDR","interpro_type":"Family","locations":[{"end":199,"score":0.0,"start":8}],"model":"PF00106","name":"short chain dehydrogenase"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00080","interpro_id":"IPR002347","interpro_name":"Short-chain dehydrogenase/reductase SDR","interpro_type":"Family","locations":[{"end":96,"score":1.3000000381735433e-11,"start":85},{"end":148,"score":1.3000000381735433e-11,"start":140},{"end":179,"score":1.3000000381735433e-11,"start":160}],"model":"PR00080","name":""},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00081","interpro_id":"IPR002347","interpro_name":"Short-chain dehydrogenase/reductase SDR","interpro_type":"Family","locations":[{"end":25,"score":1.8299999223621558e-24,"start":8},{"end":96,"score":1.8299999223621558e-24,"start":85},{"end":150,"score":1.8299999223621558e-24,"start":134},{"end":179,"score":1.8299999223621558e-24,"start":160},{"end":198,"score":1.8299999223621558e-24,"start":181}],"model":"PR00081","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00061","interpro_id":"IPR020904","interpro_name":"Short-chain dehydrogenase/reductase, conserved site","interpro_type":"Conserved_site","locations":[{"end":175,"score":0.0,"start":147}],"model":"PS00061","name":"Short-chain dehydrogenases/reductases family signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR42901","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":260,"score":0.0,"start":3}],"model":"PTHR42901:SF1","name":"ALCOHOL DEHYDROGENASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51735","interpro_id":"IPR036291","interpro_name":"NAD(P)-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":240,"score":0.0,"start":1}],"model":"0051542","name":"NAD(P)-binding Rossmann-fold domains"}],"location":{"chromosome_name":"supercont5.3","end_pos":1747749,"start_pos":1746964,"strand":"reverse"},"low_complexity_region_coords":[[34,47]],"ortholog_annotations":[{"gene_uniquename":"SJAG_01492","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21524","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01492","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24547","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01492","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32423","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01492","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC521.03","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01492","ortholog_taxonid":4932,"ortholog_uniquename":"YMR226C","reference_uniquename":"PMID:29761456"}],"product":"short chain dehydrogenase,  human DHRS7 family","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0016491","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0016491":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01492.1"],"transcripts_by_uniquename":{"SJAG_01492.1":null},"uniprot_identifier":"B6JY33","uniquename":"SJAG_01492"}


id: SJAG_01493
data:
  {"cv_annotations":{"biological_process":[{"annotations":[83737],"is_not":false,"summary":null,"term":"GO:0098705"}],"cellular_component":[{"annotations":[83735],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[83736],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[83738],"is_not":false,"summary":null,"term":"GO:0005375"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06452","GOA:B6JY34","EnsemblGenomes-Gn:SJAG_01493","InterPro:IPR007274","UniProtKB/TrEMBL:B6JY34"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps10","uniquename":"SJAG_01488"},{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"}],"genes_by_uniquename":{"HGNC:11016":null,"HGNC:11017":null,"SJAG_01493":null,"SPAC1142.05":null,"YLR411W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04145","interpro_id":"IPR007274","interpro_name":"Ctr copper transporter","interpro_type":"Family","locations":[{"end":156,"score":7.399999666854451e-14,"start":34}],"model":"PF04145","name":"Ctr copper transporter family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12483","interpro_id":"IPR007274","interpro_name":"Ctr copper transporter","interpro_type":"Family","locations":[{"end":158,"score":7.599999942865658e-16,"start":24}],"model":"PTHR12483:SF73","name":"SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS"}],"location":{"chromosome_name":"supercont5.3","end_pos":1749919,"start_pos":1749386,"strand":"reverse"},"low_complexity_region_coords":[[9,23]],"name":"ctr5","ortholog_annotations":[{"gene_uniquename":"SJAG_01493","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11016","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01493","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11017","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01493","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1142.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01493","ortholog_taxonid":4932,"ortholog_uniquename":"YLR411W","reference_uniquename":"PMID:29761456"}],"product":"plasma membrane copper transporter complex subunit Ctr5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0055085","GO:0022857","GO:0005773","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0005375":null,"GO:0005886":null,"GO:0098705":null},"tm_domain_coords":[[56,75],[135,157]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01493.1"],"transcripts_by_uniquename":{"SJAG_01493.1":null},"uniprot_identifier":"B6JY34","uniquename":"SJAG_01493"}


id: SJAG_01494
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78750],"is_not":false,"summary":null,"term":"GO:0042273"}],"cellular_component":[{"annotations":[78748],"is_not":false,"summary":null,"term":"GO:0030690"},{"annotations":[78749],"is_not":false,"summary":null,"term":"GO:0030691"},{"annotations":[78752],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[78751],"is_not":false,"summary":null,"term":"GO:0005654"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06453","InterPro:IPR005343","EnsemblGenomes-Gn:SJAG_01494","UniProtKB/TrEMBL:B6JY35"],"deletion_viability":"unknown","disordered_region_coords":[[131,138],[144,145],[160,164],[169,172],[176,177],[720,719],[1,1],[19,84],[671,696]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpt1","uniquename":"SJAG_01489"},{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"}],"genes_by_uniquename":{"HGNC:24517":null,"SJAG_01494":null,"SPAC1142.04":null,"YOR206W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03715","interpro_id":"IPR005343","interpro_name":"Nucleolar complex protein 2","interpro_type":"Family","locations":[{"end":661,"score":0.0,"start":363}],"model":"PF03715","name":"Noc2p family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12687","interpro_id":"IPR005343","interpro_name":"Nucleolar complex protein 2","interpro_type":"Family","locations":[{"end":715,"score":0.0,"start":14}],"model":"PTHR12687:SF4","name":"NUCLEOLAR COMPLEX 2 AND RAD4-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1752699,"start_pos":1750540,"strand":"reverse"},"low_complexity_region_coords":[[2,18],[85,130],[357,359],[697,719]],"name":"noc201","ortholog_annotations":[{"gene_uniquename":"SJAG_01494","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24517","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01494","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1142.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01494","ortholog_taxonid":4932,"ortholog_uniquename":"YOR206W","reference_uniquename":"PMID:29761456"}],"product":"Noc complex subunit Noc201","references_by_uniquename":{"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005730","GO:0030684","GO:0042254","GO:0005654","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005654":null,"GO:0005730":null,"GO:0030690":null,"GO:0030691":null,"GO:0042273":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01494.1"],"transcripts_by_uniquename":{"SJAG_01494.1":null},"uniprot_identifier":"B6JY35","uniquename":"SJAG_01494"}


id: SJAG_01495
data:
  {"coiled_coil_coords":[[592,612]],"cv_annotations":{"biological_process":[{"annotations":[83729],"is_not":false,"summary":null,"term":"GO:0007534"}],"cellular_component":[{"annotations":[83725],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[83726],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[83728],"is_not":false,"summary":null,"term":"GO:0034974"}],"molecular_function":[{"annotations":[69474],"is_not":false,"summary":null,"term":"GO:0003677"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06454","EnsemblGenomes-Gn:SJAG_01495","UniProtKB/TrEMBL:B6JY36","GOA:B6JY36","InterPro:IPR017956"],"deletion_viability":"unknown","disordered_region_coords":[[126,150],[153,154],[164,198],[231,241],[267,280],[314,315],[317,362],[368,370],[417,428],[457,481],[483,526],[531,532],[565,566],[574,576],[580,583],[1,40],[57,109],[211,216],[374,404],[430,440]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"qcr6","uniquename":"SJAG_01490"},{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"}],"genes_by_uniquename":{"HGNC:29574":null,"SJAG_01495":null,"SPAC1142.03c":null,"YPL121C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:6.10.140.1020","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":702,"score":4.3999999947851487e-16,"start":585}],"model":"3viqA00","name":""},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00929","interpro_id":"IPR017956","interpro_name":"AT hook, DNA-binding motif","interpro_type":"Conserved_site","locations":[{"end":58,"score":7.300000106624793e-7,"start":48},{"end":88,"score":7.300000106624793e-7,"start":77},{"end":142,"score":7.300000106624793e-7,"start":132}],"model":"PR00929","name":""},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28527","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":702,"score":0.0,"start":1}],"model":"PTHR28527:SF2","name":"MATING-TYPE SWITCHING PROTEIN SWI2-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00384","interpro_id":"IPR017956","interpro_name":"AT hook, DNA-binding motif","interpro_type":"Conserved_site","locations":[{"end":60,"score":0.20000000298023224,"start":48},{"end":91,"score":0.41999998688697815,"start":79},{"end":146,"score":65.0,"start":134}],"model":"SM00384","name":"DNA binding domain with preference for A/T rich regions"}],"location":{"chromosome_name":"supercont5.3","end_pos":1755205,"start_pos":1753097,"strand":"forward"},"low_complexity_region_coords":[[41,56],[110,125],[217,230],[254,266],[405,416],[441,456]],"name":"swi2","ortholog_annotations":[{"gene_uniquename":"SJAG_01495","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29574","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01495","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1142.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01495","ortholog_taxonid":4932,"ortholog_uniquename":"YPL121C","reference_uniquename":"PMID:29761456"}],"product":"DNA recombination mediator Swi2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005694","GO:0005730","GO:0006310","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003677":null,"GO:0005730":null,"GO:0007534":null,"GO:0031934":null,"GO:0034974":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01495.1"],"transcripts_by_uniquename":{"SJAG_01495.1":null},"uniprot_identifier":"B6JY36","uniquename":"SJAG_01495"}


id: SJAG_01496
data:
  {"coiled_coil_coords":[[182,201]],"cv_annotations":{"biological_process":[{"annotations":[83724],"is_not":false,"summary":null,"term":"GO:0006620"}],"cellular_component":[{"annotations":[83723],"is_not":false,"summary":null,"term":"GO:0072380"}]},"dbxrefs":["GOA:B6JY37","InterPro:IPR013026","EnsemblGenomes-Gn:SJAG_01496","InterPro:IPR032374","InterPro:IPR011990","UniProtKB/TrEMBL:B6JY37","EnsemblGenomes-Tr:EEB06455","InterPro:IPR001440","InterPro:IPR019734"],"deletion_viability":"unknown","disordered_region_coords":[[78,79],[83,84],[87,88],[127,131],[134,142],[230,231],[233,234],[236,242],[245,259],[313,313],[202,201],[208,215],[261,295]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ogm4","uniquename":"SJAG_01491"},{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"}],"genes_by_uniquename":{"HGNC:10819":null,"HGNC:23567":null,"SJAG_01496":null,"SPAC1142.02c":null,"YOR007C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.5.420","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":68,"score":7.79999979536039e-14,"start":1}],"model":"4cpgA00","name":"Immunoglobulin FC, subunit C"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.10","interpro_id":"IPR011990","interpro_name":"Tetratricopeptide-like helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":239,"score":7.006492321624085e-45,"start":70}],"model":"3sz7A00","name":"Tetratricopeptide repeat domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00515","interpro_id":"IPR001440","interpro_name":"Tetratricopeptide repeat 1","interpro_type":"Repeat","locations":[{"end":147,"score":4.400000079840538e-7,"start":117},{"end":181,"score":3.400000003761505e-10,"start":149}],"model":"PF00515","name":"Tetratricopeptide repeat"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16546","interpro_id":"IPR032374","interpro_name":"SGTA, homodimerisation domain","interpro_type":"Domain","locations":[{"end":63,"score":1.4000000103724471e-16,"start":3}],"model":"PF16546","name":"Homodimerisation domain of SGTA"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50005","interpro_id":"IPR019734","interpro_name":"Tetratricopeptide repeat","interpro_type":"Repeat","locations":[{"end":113,"score":0.0,"start":80},{"end":147,"score":0.0,"start":114},{"end":181,"score":0.0,"start":148}],"model":"PS50005","name":"TPR repeat profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50293","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":181,"score":0.0,"start":148}],"model":"PS50293","name":"TPR repeat region circular profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45831","interpro_id":"IPR047150","interpro_name":"SGT family","interpro_type":"Family","locations":[{"end":310,"score":0.0,"start":1}],"model":"PTHR45831:SF2","name":"LD24721P"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00028","interpro_id":"IPR019734","interpro_name":"Tetratricopeptide repeat","interpro_type":"Repeat","locations":[{"end":113,"score":0.013000000268220901,"start":80},{"end":147,"score":0.00003199999991920777,"start":114},{"end":181,"score":1.4999999464748726e-8,"start":148}],"model":"SM00028","name":"Tetratricopeptide repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48452","interpro_id":"IPR011990","interpro_name":"Tetratricopeptide-like helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":200,"score":7.989999832460322e-35,"start":74}],"model":"0040251","name":"TPR-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":1756698,"start_pos":1755657,"strand":"forward"},"low_complexity_region_coords":[[39,50],[67,86],[202,207],[216,229],[296,312]],"name":"sgt2","ortholog_annotations":[{"gene_uniquename":"SJAG_01496","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10819","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01496","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23567","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01496","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1142.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01496","ortholog_taxonid":4932,"ortholog_uniquename":"YOR007C","reference_uniquename":"PMID:29761456"}],"product":"TRC complex (ER membrane insertion) TPR repeat subunit Sgt2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006605","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006620":null,"GO:0072380":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01496.1"],"transcripts_by_uniquename":{"SJAG_01496.1":null},"uniprot_identifier":"B6JY37","uniquename":"SJAG_01496"}


id: SJAG_01497
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70118],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[70119],"is_not":false,"summary":null,"term":"GO:1990116"}],"cellular_component":[{"annotations":[83717],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[70117],"is_not":false,"summary":null,"term":"GO:1990112"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01497","GOA:B6JY38","UniProtKB/TrEMBL:B6JY38","EnsemblGenomes-Tr:EEB06456","InterPro:IPR006994"],"deletion_viability":"unknown","disordered_region_coords":[[96,113],[131,143],[527,528],[532,539],[572,594],[649,648],[1,3],[17,19],[32,49],[66,65],[78,77],[555,559],[614,619],[632,635]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01492"},{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"}],"genes_by_uniquename":{"HGNC:29181":null,"SJAG_01497":null,"SPAC1142.01":null,"YDR333C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04910","interpro_id":"IPR006994","interpro_name":"TCF25/Rqc1","interpro_type":"Family","locations":[{"end":529,"score":0.0,"start":223}],"model":"PF04910","name":"Transcriptional repressor TCF25"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22684","interpro_id":"IPR006994","interpro_name":"TCF25/Rqc1","interpro_type":"Family","locations":[{"end":627,"score":0.0,"start":1}],"model":"PTHR22684:SF0","name":"NULP1-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1758813,"start_pos":1756867,"strand":"reverse"},"low_complexity_region_coords":[[4,16],[20,31],[50,65],[66,77],[78,95],[157,167],[560,571],[620,631],[636,648]],"name":"rqc1","ortholog_annotations":[{"gene_uniquename":"SJAG_01497","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29181","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01497","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1142.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01497","ortholog_taxonid":4932,"ortholog_uniquename":"YDR333C","reference_uniquename":"PMID:29761456"}],"product":"ribosome quality control complex (RQC) complex subunit Rqc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0072344":null,"GO:1990112":null,"GO:1990116":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01497.1"],"transcripts_by_uniquename":{"SJAG_01497.1":null},"uniprot_identifier":"B6JY38","uniquename":"SJAG_01497"}


id: SJAG_01498
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[73524],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[94799],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01498","InterPro:IPR036875","UniProtKB/TrEMBL:B6JY39","GOA:B6JY39","InterPro:IPR001878","InterPro:IPR042246","EnsemblGenomes-Tr:EEB06457"],"deletion_viability":"unknown","disordered_region_coords":[[24,25],[31,52]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ctr5","uniquename":"SJAG_01493"},{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"}],"genes_by_uniquename":{"HGNC:25424":null,"SJAG_01498":null,"SPAC683.02c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:4.10.60.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":105,"score":6.80000000752301e-10,"start":37},{"end":159,"score":4.000000053405728e-10,"start":108}],"model":"2li8A00","name":"Zinc finger, CCHC-type"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00098","interpro_id":"IPR001878","interpro_name":"Zinc finger, CCHC-type","interpro_type":"Domain","locations":[{"end":124,"score":0.0017000000225380063,"start":109}],"model":"PF00098","name":"Zinc knuckle"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50158","interpro_id":"IPR001878","interpro_name":"Zinc finger, CCHC-type","interpro_type":"Domain","locations":[{"end":78,"score":0.0,"start":63},{"end":125,"score":0.0,"start":110}],"model":"PS50158","name":"Zinc finger CCHC-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46242","interpro_id":"IPR042246","interpro_name":"Zinc finger CCHC domain-containing protein 9","interpro_type":"Family","locations":[{"end":203,"score":0.0,"start":39}],"model":"PTHR46242:SF1","name":"ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 9 ZCCHC9"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00343","interpro_id":"IPR001878","interpro_name":"Zinc finger, CCHC-type","interpro_type":"Domain","locations":[{"end":78,"score":0.035999998450279236,"start":62},{"end":101,"score":0.11999999731779099,"start":85},{"end":125,"score":0.006200000178068876,"start":109},{"end":152,"score":0.5,"start":136}],"model":"SM00343","name":"zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57756","interpro_id":"IPR036875","interpro_name":"Zinc finger, CCHC-type superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":102,"score":3.450000063409675e-9,"start":58},{"end":152,"score":1.9399999828806358e-8,"start":103}],"model":"0045753","name":"Retrovirus zinc finger-like domains"}],"location":{"chromosome_name":"supercont5.3","end_pos":1759788,"start_pos":1759140,"strand":"reverse"},"low_complexity_region_coords":[[186,199]],"ortholog_annotations":[{"gene_uniquename":"SJAG_01498","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25424","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01498","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC683.02c","reference_uniquename":"PMID:21511999"}],"product":"zf-CCHC type zinc finger protein, human ZCCHC9 ortholog, implicated in mRNA splicing","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0008270":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01498.1"],"transcripts_by_uniquename":{"SJAG_01498.1":null},"uniprot_identifier":"B6JY39","uniquename":"SJAG_01498"}


id: SJAG_01499
data:
  {"coiled_coil_coords":[[503,528],[556,576],[1117,1137]],"cv_annotations":{"cellular_component":[{"annotations":[94869],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[94870],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[94871],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[94872],"is_not":false,"summary":null,"term":"GO:0003724"}]},"dbxrefs":["InterPro:IPR027417","UniProtKB/TrEMBL:B6JY40","EnsemblGenomes-Tr:EEB06458","InterPro:IPR011545","InterPro:IPR014001","GOA:B6JY40","EnsemblGenomes-Gn:SJAG_01499","InterPro:IPR001650"],"deletion_viability":"unknown","disordered_region_coords":[[445,472],[501,502],[529,553],[562,563],[577,577],[579,580],[1128,1129],[1131,1132],[1663,1664],[1667,1669],[1680,1683]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"noc201","uniquename":"SJAG_01494"},{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"}],"genes_by_uniquename":{"HGNC:25942":null,"HGNC:26429":null,"SJAG_01499":null,"SPAC694.02":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":928,"score":0.0,"start":714},{"end":1323,"score":5.199999864024309e-36,"start":1059}],"model":"4a4zA01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00270","interpro_id":"IPR011545","interpro_name":"DEAD/DEAH box helicase domain","interpro_type":"Domain","locations":[{"end":903,"score":2.9000001185164326e-13,"start":745}],"model":"PF00270","name":"DEAD/DEAH box helicase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00271","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":1300,"score":7.700000281829489e-8,"start":1230}],"model":"PF00271","name":"Helicase conserved C-terminal domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51192","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":920,"score":0.0,"start":750}],"model":"PS51192","name":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51194","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":1339,"score":0.0,"start":1163}],"model":"PS51194","name":"Superfamilies 1 and 2 helicase C-terminal domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR44533","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1721,"score":0.0,"start":10}],"model":"PTHR44533:SF4","name":"DEAD/H RNA HELICASE, PUTATIVE-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00487","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":929,"score":1.2000000136174153e-17,"start":738}],"model":"SM00487","name":"DEAD-like helicases superfamily"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00490","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":1300,"score":2.9000000317802588e-11,"start":1221}],"model":"SM00490","name":"helicase superfamily c-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":1307,"score":1.3500000458273322e-34,"start":753}],"model":"0052004","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18025","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":933,"score":0.0,"start":741}],"model":"cd18025","name":"DEXH-box helicase domain of DEAD box protein 60"}],"location":{"chromosome_name":"supercont5.3","end_pos":1765368,"start_pos":1760152,"strand":"forward"},"low_complexity_region_coords":[[94,111],[267,280],[529,555],[561,576],[698,711],[1122,1137],[1334,1347],[1665,1690]],"ortholog_annotations":[{"gene_uniquename":"SJAG_01499","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25942","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01499","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26429","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01499","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC694.02","reference_uniquename":"PMID:21511999"}],"product":"DEAD/DEAH box helicase, human DDL60 and DDL60L ortholog, implicated in mRNA degradation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140098","GO:0005829","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003724":null,"GO:0005524":null,"GO:0005829":null,"GO:0016887":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01499.1"],"transcripts_by_uniquename":{"SJAG_01499.1":null},"uniprot_identifier":"B6JY40","uniquename":"SJAG_01499"}


id: SJAG_01500
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71099],"is_not":false,"summary":null,"term":"GO:0034356"}],"cellular_component":[{"annotations":[94873],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71097],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[94876],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[71096],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[71095],"is_not":false,"summary":null,"term":"GO:0000309"}]},"dbxrefs":["InterPro:IPR005248","GOA:B6JY41","EnsemblGenomes-Tr:EEB06459","InterPro:IPR014729","UniProtKB/TrEMBL:B6JY41","EnsemblGenomes-Gn:SJAG_01500"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"swi2","uniquename":"SJAG_01495"},{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"}],"genes_by_uniquename":{"SJAG_01500":null,"SPAC694.03":null,"YCL047C":null},"has_protein_features":false,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":246,"score":1.4000000185454398e-31,"start":33}],"model":"1yumA00","name":"HUPs"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR31285","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":222,"score":6.305843089461677e-44,"start":26}],"model":"PTHR31285:SF0","name":"NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52374","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":246,"score":2.3499999577357206e-19,"start":34}],"model":"0047860","name":"Nucleotidylyl transferase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02165","interpro_id":"IPR005248","interpro_name":"Nicotinate/nicotinamide nucleotide adenylyltransferase","interpro_type":"Family","locations":[{"end":246,"score":2.861679871370616e-32,"start":35}],"model":"cd02165","name":"Nicotinamide/nicotinate mononucleotide adenylyltransferase"}],"location":{"chromosome_name":"supercont5.3","end_pos":1766568,"start_pos":1765744,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01500","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC694.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01500","ortholog_taxonid":4932,"ortholog_uniquename":"YCL047C","reference_uniquename":"PMID:29761456"}],"product":"nicotinamide-nucleotide adenylyltransferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0016887","GO:0016779","GO:0055086","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000309":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0016887":null,"GO:0034356":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01500.1"],"transcripts_by_uniquename":{"SJAG_01500.1":null},"uniprot_identifier":"B6JY41","uniquename":"SJAG_01500"}


id: SJAG_01501
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[94879],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94880],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[76978],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[94882],"is_not":false,"summary":null,"term":"GO:0016787"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01501","InterPro:IPR003226","UniProtKB/TrEMBL:B6JY42","EnsemblGenomes-Tr:EEB06460"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sgt2","uniquename":"SJAG_01496"},{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"}],"genes_by_uniquename":{"HGNC:17590":null,"SJAG_01501":null,"SPAC694.04c":null,"YER156C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03690","interpro_id":"IPR003226","interpro_name":"Metal-dependent protein hydrolase","interpro_type":"Family","locations":[{"end":342,"score":0.0,"start":30}],"model":"PF03690","name":"Uncharacterised protein family (UPF0160)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11215","interpro_id":"IPR003226","interpro_name":"Metal-dependent protein hydrolase","interpro_type":"Family","locations":[{"end":343,"score":0.0,"start":22}],"model":"PTHR11215:SF1","name":"METAL DEPENDENT HYDROLASE - RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1767816,"start_pos":1766644,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01501","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17590","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01501","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC694.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01501","ortholog_taxonid":4932,"ortholog_uniquename":"YER156C","reference_uniquename":"PMID:29761456"}],"product":"nuclear/mitochondrial metal-dependent protein hydrolase, human MYG1 ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005739","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005739":null,"GO:0005829":null,"GO:0016787":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01501.1"],"transcripts_by_uniquename":{"SJAG_01501.1":null},"uniprot_identifier":"B6JY42","uniquename":"SJAG_01501"}


id: SJAG_01502
data:
  {"coiled_coil_coords":[[240,271]],"cv_annotations":{"cellular_component":[{"annotations":[96180],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96181],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06461","UniProtKB/TrEMBL:B6JY43","EnsemblGenomes-Gn:SJAG_01502"],"deletion_viability":"unknown","disordered_region_coords":[[1,9],[11,12],[88,93],[95,98],[115,116],[129,131],[141,142],[148,184],[186,213],[250,252],[254,256],[272,276]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rqc1","uniquename":"SJAG_01497"},{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"}],"genes_by_uniquename":{"SJAG_01502":null,"SPAC9.11":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1769450,"start_pos":1768580,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01502","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9.11","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01502.1"],"transcripts_by_uniquename":{"SJAG_01502.1":null},"uniprot_identifier":"B6JY43","uniquename":"SJAG_01502"}


id: SJAG_01503
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73119],"is_not":false,"summary":null,"term":"GO:0033615"}],"cellular_component":[{"annotations":[96182],"is_not":false,"summary":null,"term":"GO:0005759"}]},"dbxrefs":["InterPro:IPR023335","InterPro:IPR042272","UniProtKB/TrEMBL:B6JY44","EnsemblGenomes-Tr:EEB06462","GOA:B6JY44","EnsemblGenomes-Gn:SJAG_01503","InterPro:IPR011419"],"deletion_viability":"unknown","disordered_region_coords":[[1,3]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01498"},{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"}],"genes_by_uniquename":{"HGNC:18802":null,"SJAG_01503":null,"SPAC9.12c":null,"YJL180C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.3580.10","interpro_id":"IPR023335","interpro_name":"ATP12 orthogonal Bundle domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":278,"score":1.2999999660060772e-36,"start":115}],"model":"2r31A02","name":"ATP12 ATPase"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.2180.10","interpro_id":"IPR042272","interpro_name":"ATP12, ATP synthase F1-assembly protein, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":107,"score":3.4000000592726565e-9,"start":44}],"model":"2r31A01","name":"ATP12-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07542","interpro_id":"IPR011419","interpro_name":"ATP12, ATP synthase F1-assembly protein","interpro_type":"Family","locations":[{"end":182,"score":4.100000030816267e-25,"start":52}],"model":"PF07542","name":"ATP12 chaperone protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21013","interpro_id":"IPR011419","interpro_name":"ATP12, ATP synthase F1-assembly protein","interpro_type":"Family","locations":[{"end":274,"score":0.0,"start":44}],"model":"PTHR21013:SF10","name":"ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF160909","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":275,"score":0.0,"start":46}],"model":"0054649","name":"ATP12-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":1770422,"start_pos":1769619,"strand":"reverse"},"name":"atp12","ortholog_annotations":[{"gene_uniquename":"SJAG_01503","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18802","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01503","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01503","ortholog_taxonid":4932,"ortholog_uniquename":"YJL180C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial F1-FO ATP synthase chaperone Atp12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0005739","GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005759":null,"GO:0033615":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01503.1"],"transcripts_by_uniquename":{"SJAG_01503.1":null},"uniprot_identifier":"B6JY44","uniquename":"SJAG_01503"}


id: SJAG_01504
data:
  {"coiled_coil_coords":[[176,208]],"cv_annotations":{"biological_process":[{"annotations":[96189],"is_not":false,"summary":null,"term":"GO:0000349"},{"annotations":[96190],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[70930],"is_not":false,"summary":null,"term":"GO:0071006"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01504","UniProtKB/TrEMBL:B6JY45","GOA:B6JY45","InterPro:IPR007590","EnsemblGenomes-Tr:EEB06463"],"deletion_viability":"unknown","disordered_region_coords":[[12,13],[18,36],[99,100],[102,110],[113,149],[154,169],[181,209],[257,268]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01499"},{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"}],"genes_by_uniquename":{"HGNC:25518":null,"SJAG_01504":null,"SPAC9.13c":null,"YKL095W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_03226","interpro_id":"IPR043701","interpro_name":"Splicing factor Yju2","interpro_type":"Family","locations":[{"end":262,"score":0.0,"start":1}],"model":"MF_03226","name":"Splicing factor YJU2 [YJU2]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04502","interpro_id":"IPR007590","interpro_name":"Saf4/Yju2 protein","interpro_type":"Family","locations":[{"end":206,"score":0.0,"start":9}],"model":"PF04502","name":"Saf4/Yju2 protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12111","interpro_id":"IPR007590","interpro_name":"Saf4/Yju2 protein","interpro_type":"Family","locations":[{"end":223,"score":0.0,"start":7}],"model":"PTHR12111:SF1","name":"SPLICING FACTOR YJU2"}],"location":{"chromosome_name":"supercont5.3","end_pos":1771457,"start_pos":1770651,"strand":"reverse"},"low_complexity_region_coords":[[12,35],[189,208]],"name":"cwf16","ortholog_annotations":[{"gene_uniquename":"SJAG_01504","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25518","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01504","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01504","ortholog_taxonid":4932,"ortholog_uniquename":"YKL095W","reference_uniquename":"PMID:29761456"}],"product":"splicing factor Cwf16","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000349":null,"GO:0045292":null,"GO:0071006":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01504.1"],"transcripts_by_uniquename":{"SJAG_01504.1":null},"uniprot_identifier":"B6JY45","uniquename":"SJAG_01504"}


id: SJAG_01505
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94249],"is_not":false,"summary":null,"term":"GO:0071705"},{"annotations":[94250],"is_not":false,"summary":null,"term":"GO:0006847"}],"cellular_component":[{"annotations":[94246],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[94247],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[77495],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[77494],"is_not":false,"summary":null,"term":"GO:0015123"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY46","EnsemblGenomes-Tr:EEB06464","EnsemblGenomes-Gn:SJAG_01505","GOA:B6JY46","InterPro:IPR000791"],"deletion_viability":"unknown","disordered_region_coords":[[285,287]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01500"},{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"}],"genes_by_uniquename":{"SJAG_01505":null,"SPAC5D6.09c":null,"YCR010C":null,"YDR384C":null,"YNR002C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"NF038013","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":253,"score":1.6000000288040152e-34,"start":78}],"model":"NF038013","name":"acetate uptake transporter"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01184","interpro_id":"IPR000791","interpro_name":"Acetate transporter GPR1/Ato2/SatP-like","interpro_type":"Family","locations":[{"end":269,"score":0.0,"start":63}],"model":"PF01184","name":"GPR1/FUN34/yaaH family"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01114","interpro_id":"IPR047622","interpro_name":"GPR1/FUN34/YaaH conserved region","interpro_type":"Conserved_site","locations":[{"end":87,"score":0.0,"start":78}],"model":"PS01114","name":"GPR1/FUN34/yaaH family signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR31123","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":273,"score":0.0,"start":3}],"model":"PTHR31123:SF1","name":"ACCUMULATION OF DYADS PROTEIN 2-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1772931,"start_pos":1772050,"strand":"reverse"},"low_complexity_region_coords":[[82,97]],"name":"mug86","ortholog_annotations":[{"gene_uniquename":"SJAG_01505","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC5D6.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01505","ortholog_taxonid":4932,"ortholog_uniquename":"YCR010C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01505","ortholog_taxonid":4932,"ortholog_uniquename":"YDR384C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01505","ortholog_taxonid":4932,"ortholog_uniquename":"YNR002C","reference_uniquename":"PMID:29761456"}],"product":"plasma membrane acetate transmembrane transporter","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005886","GO:0005794","GO:0055085","GO:0022857","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005794":null,"GO:0005886":null,"GO:0006847":null,"GO:0015123":null,"GO:0071705":null},"tm_domain_coords":[[76,98],[108,130],[137,159],[169,191],[198,220],[235,254]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01505.1"],"transcripts_by_uniquename":{"SJAG_01505.1":null},"uniprot_identifier":"B6JY46","uniquename":"SJAG_01505"}


id: SJAG_01506
data:
  {"cv_annotations":{},"dbxrefs":["InterPro:IPR013903","UniProtKB/TrEMBL:B6JY47","EnsemblGenomes-Gn:SJAG_01506","EnsemblGenomes-Tr:EEB06465"],"deletion_viability":"unknown","disordered_region_coords":[[11,12],[99,103]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01501"},{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"}],"genes_by_uniquename":{"SJAG_01506":null,"SPCC1259.14c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08594","interpro_id":"IPR013903","interpro_name":"Meiotic expression up-regulated protein","interpro_type":"Family","locations":[{"end":373,"score":4.203895392974451e-45,"start":202}],"model":"PF08594","name":"Uncharacterised protein family (UPF0300)"}],"location":{"chromosome_name":"supercont5.3","end_pos":1775615,"start_pos":1774018,"strand":"reverse"},"name":"meu27","ortholog_annotations":[{"gene_uniquename":"SJAG_01506","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1259.14c","reference_uniquename":"PMID:26896847"}],"product":"UPF0300 family protein 5","references_by_uniquename":{"PMID:26896847":null},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01506.1"],"transcripts_by_uniquename":{"SJAG_01506.1":null},"uniprot_identifier":"B6JY47","uniquename":"SJAG_01506"}


id: SJAG_01507
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94092],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[94090],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[94091],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[94093],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[94094],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR013083","InterPro:IPR042494","UniProtKB/TrEMBL:B6JY48","GOA:B6JY48","InterPro:IPR001841","EnsemblGenomes-Tr:EEB06466","EnsemblGenomes-Gn:SJAG_01507"],"deletion_viability":"unknown","disordered_region_coords":[[262,267]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01502"},{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"}],"genes_by_uniquename":{"HGNC:10057":null,"SJAG_01507":null,"SPAC57A7.09":null,"YBR062C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":339,"score":1.3000000153036537e-15,"start":272}],"model":"4v3lC00","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.50.30.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":205,"score":8.299999749528534e-18,"start":43}],"model":"4tjvA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13639","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":329,"score":2.50000003337858e-11,"start":286}],"model":"PF13639","name":"Ring finger domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50089","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":329,"score":0.0,"start":287}],"model":"PS50089","name":"Zinc finger RING-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15302","interpro_id":"IPR042494","interpro_name":"E3 ubiquitin-protein ligase RNF103","interpro_type":"Family","locations":[{"end":335,"score":1.0999999722265076e-15,"start":256}],"model":"PTHR15302:SF0","name":"E3 UBIQUITIN-PROTEIN LIGASE RNF103"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00184","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":328,"score":7.799999934832158e-8,"start":287}],"model":"SM00184","name":"Ring finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":335,"score":4.290000193438867e-18,"start":286}],"model":"0050087","name":"RING/U-box"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd16473","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":335,"score":7.937030117413407e-16,"start":286}],"model":"cd16473","name":"RING finger, H2 subclass, found in RING finger protein 103 (RNF103) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1777518,"start_pos":1776431,"strand":"forward"},"low_complexity_region_coords":[[212,221]],"name":"rnf13","ortholog_annotations":[{"gene_uniquename":"SJAG_01507","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10057","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01507","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A7.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01507","ortholog_taxonid":4932,"ortholog_uniquename":"YBR062C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin-protein ligase E3, human RNF13 family homolog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005794","GO:0030163","GO:0005773","GO:0019787","GO:0016746","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0005794":null,"GO:0006511":null,"GO:0008270":null,"GO:0061630":null},"tm_domain_coords":[[10,32],[212,234]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01507.1"],"transcripts_by_uniquename":{"SJAG_01507.1":null},"uniprot_identifier":"B6JY48","uniquename":"SJAG_01507"}


id: SJAG_01508
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77136],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[77137],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[94102],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[94103],"is_not":false,"summary":null,"term":"GO:0006890"}],"cellular_component":[{"annotations":[77132],"is_not":false,"summary":null,"term":"GO:0030126"},{"annotations":[94096],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77134],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[77135],"is_not":false,"summary":null,"term":"GO:0005793"},{"annotations":[77133],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[94104],"is_not":false,"summary":null,"term":"GO:0005198"}]},"dbxrefs":["InterPro:IPR037067","InterPro:IPR013040","EnsemblGenomes-Tr:EEB06467","InterPro:IPR009028","InterPro:IPR016024","InterPro:IPR017106","InterPro:IPR032154","InterPro:IPR002553","InterPro:IPR012295","GOA:B6JY49","InterPro:IPR013041","UniProtKB/TrEMBL:B6JY49","EnsemblGenomes-Gn:SJAG_01508","InterPro:IPR011989"],"deletion_viability":"unknown","disordered_region_coords":[[1,3],[616,620],[724,726],[772,775],[779,782],[839,858]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atp12","uniquename":"SJAG_01503"},{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"}],"genes_by_uniquename":{"HGNC:2236":null,"HGNC:2237":null,"SJAG_01508":null,"SPAC57A7.10c":null,"YNL287W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":331,"score":0.0,"start":16},{"end":586,"score":9.999999960041972e-12,"start":351}],"model":"3tjzB00","name":"Leucine-rich Repeat Variant"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.1480","interpro_id":"IPR037067","interpro_name":"Coatomer, gamma subunit, appendage domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":789,"score":1.4993893568275543e-43,"start":640}],"model":"1r4xA01","name":"Coatomer, gamma subunit, appendage domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.310.10","interpro_id":"IPR012295","interpro_name":"TBP domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":907,"score":1.2999999839887283e-22,"start":792}],"model":"1r4xA02","name":"TATA-Binding Protein"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01602","interpro_id":"IPR002553","interpro_name":"Clathrin/coatomer adaptor, adaptin-like, N-terminal","interpro_type":"Domain","locations":[{"end":559,"score":0.0,"start":24}],"model":"PF01602","name":"Adaptin N terminal region"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08752","interpro_id":"IPR013040","interpro_name":"Coatomer, gamma subunit, appendage, Ig-like subdomain","interpro_type":"Domain","locations":[{"end":789,"score":0.0,"start":645}],"model":"PF08752","name":"Coatomer gamma subunit appendage platform subdomain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16381","interpro_id":"IPR032154","interpro_name":"Coatomer subunit gamma, C-terminal","interpro_type":"Domain","locations":[{"end":906,"score":3.899999861903923e-30,"start":792}],"model":"PF16381","name":"Coatomer subunit gamma-1 C-terminal appendage platform"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF037093","interpro_id":"IPR017106","interpro_name":"Coatomer gamma subunit","interpro_type":"Family","locations":[{"end":907,"score":0.0,"start":1}],"model":"PIRSF037093","name":"Coatomer, gamma subunit"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10261","interpro_id":"IPR017106","interpro_name":"Coatomer gamma subunit","interpro_type":"Family","locations":[{"end":906,"score":0.0,"start":3}],"model":"PTHR10261:SF0","name":"COATOMER SUBUNIT GAMMA"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":597,"score":0.0,"start":23}],"model":"0038302","name":"ARM repeat"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF49348","interpro_id":"IPR013041","interpro_name":"Clathrin adaptor, appendage, Ig-like subdomain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":793,"score":1.401298464324817e-44,"start":642}],"model":"0049103","name":"Clathrin adaptor appendage domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55711","interpro_id":"IPR009028","interpro_name":"Coatomer/calthrin adaptor appendage, C-terminal subdomain","interpro_type":"Homologous_superfamily","locations":[{"end":905,"score":3.3700000546135243e-21,"start":794}],"model":"0043123","name":"Subdomain of clathrin and coatomer appendage domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":1780905,"start_pos":1778138,"strand":"reverse"},"low_complexity_region_coords":[[150,160],[621,641],[704,713],[771,788]],"name":"sec21","ortholog_annotations":[{"gene_uniquename":"SJAG_01508","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2236","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01508","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2237","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01508","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A7.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01508","ortholog_taxonid":4932,"ortholog_uniquename":"YNL287W","reference_uniquename":"PMID:29761456"}],"product":"coatomer gamma subunit Sec21","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005794","GO:0031410","GO:0005783","GO:0005198","GO:0016192","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005198":null,"GO:0005783":null,"GO:0005793":null,"GO:0005829":null,"GO:0006886":null,"GO:0006888":null,"GO:0006890":null,"GO:0006891":null,"GO:0030126":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01508.1"],"transcripts_by_uniquename":{"SJAG_01508.1":null},"uniprot_identifier":"B6JY49","uniquename":"SJAG_01508"}


id: SJAG_01509
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77226],"is_not":false,"summary":null,"term":"GO:0009267"},{"annotations":[94109],"is_not":false,"summary":null,"term":"GO:0031139"},{"annotations":[77227],"is_not":false,"summary":null,"term":"GO:0010506"},{"annotations":[94111],"is_not":false,"summary":null,"term":"GO:0038202"}],"cellular_component":[{"annotations":[94106],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[77223],"is_not":false,"summary":null,"term":"GO:0031931"}],"molecular_function":[{"annotations":[77224],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["InterPro:IPR001680","EnsemblGenomes-Tr:EEB06468","InterPro:IPR011989","InterPro:IPR015943","UniProtKB/TrEMBL:B6JY50","InterPro:IPR019775","GOA:B6JY50","InterPro:IPR017986","InterPro:IPR036322","EnsemblGenomes-Gn:SJAG_01509","InterPro:IPR004083","InterPro:IPR029347","InterPro:IPR016024"],"deletion_viability":"unknown","disordered_region_coords":[[1,20],[40,56],[59,63],[71,73],[290,295],[853,862],[893,917],[940,960]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf16","uniquename":"SJAG_01504"},{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"}],"genes_by_uniquename":{"HGNC:30287":null,"SJAG_01509":null,"SPAC57A7.11":null,"YHR186C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":773,"score":1.8999999397044928e-20,"start":492}],"model":"1ee4A00","name":"Leucine-rich Repeat Variant"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1315,"score":1.0999999433028738e-28,"start":994}],"model":"2ovrB02","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14538","interpro_id":"IPR029347","interpro_name":"Raptor, N-terminal CASPase-like domain","interpro_type":"Domain","locations":[{"end":276,"score":0.0,"start":126}],"model":"PF14538","name":"Raptor N-terminal CASPase like domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR01547","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":144,"score":0.0,"start":123},{"end":186,"score":0.0,"start":167},{"end":209,"score":0.0,"start":188},{"end":239,"score":0.0,"start":214},{"end":265,"score":0.0,"start":241},{"end":344,"score":0.0,"start":324},{"end":389,"score":0.0,"start":362},{"end":421,"score":0.0,"start":397},{"end":507,"score":0.0,"start":477},{"end":529,"score":0.0,"start":508},{"end":550,"score":0.0,"start":531},{"end":571,"score":0.0,"start":555},{"end":1171,"score":0.0,"start":1153}],"model":"PR01547","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00678","interpro_id":"IPR019775","interpro_name":"WD40 repeat, conserved site","interpro_type":"Conserved_site","locations":[{"end":1216,"score":0.0,"start":1202}],"model":"PS00678","name":"Trp-Asp (WD) repeats signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":1224,"score":0.0,"start":1182}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12848","interpro_id":"IPR004083","interpro_name":"Regulatory associated protein of TOR","interpro_type":"Family","locations":[{"end":1300,"score":0.0,"start":62}],"model":"PTHR12848:SF16","name":"REGULATORY-ASSOCIATED PROTEIN OF MTOR"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":1026,"score":65.0,"start":991},{"end":1125,"score":240.0,"start":1085},{"end":1169,"score":60.0,"start":1126},{"end":1215,"score":0.013000000268220901,"start":1175},{"end":1257,"score":4.199999809265137,"start":1218},{"end":1304,"score":74.0,"start":1264}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01302","interpro_id":"IPR029347","interpro_name":"Raptor, N-terminal CASPase-like domain","interpro_type":"Domain","locations":[{"end":277,"score":0.0,"start":124}],"model":"SM01302","name":"Raptor N-terminal CASPase like domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":750,"score":9.870000113112935e-33,"start":471}],"model":"0047335","name":"ARM repeat"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1313,"score":8.860000085459865e-32,"start":1006}],"model":"0047761","name":"WD40 repeat-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":1785499,"start_pos":1781484,"strand":"forward"},"low_complexity_region_coords":[[24,39],[76,84],[498,513]],"name":"mip1","ortholog_annotations":[{"gene_uniquename":"SJAG_01509","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30287","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01509","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A7.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01509","ortholog_taxonid":4932,"ortholog_uniquename":"YHR186C","reference_uniquename":"PMID:29761456"}],"product":"TORC1 substrate adaptor, WD repeat protein, Raptor homolog Mip1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0060090","GO:0000747","GO:0005773","GO:0023052","GO:0006914"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0009267":null,"GO:0010506":null,"GO:0030674":null,"GO:0031139":null,"GO:0031931":null,"GO:0038202":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01509.1"],"transcripts_by_uniquename":{"SJAG_01509.1":null},"uniprot_identifier":"B6JY50","uniquename":"SJAG_01509"}


id: SJAG_01510
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94115],"is_not":false,"summary":null,"term":"GO:0051083"},{"annotations":[94116],"is_not":false,"summary":null,"term":"GO:0042026"}],"cellular_component":[{"annotations":[70769],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[70768],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[70767],"is_not":false,"summary":null,"term":"GO:0000774"},{"annotations":[94117],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[94118],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[94119],"is_not":false,"summary":null,"term":"GO:0140662"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01510","UniProtKB/TrEMBL:B6JY51","InterPro:IPR013126","InterPro:IPR029047","GOA:B6JY51","EnsemblGenomes-Tr:EEB06469"],"deletion_viability":"unknown","disordered_region_coords":[[26,30],[32,33],[82,97],[108,112],[491,495],[530,546],[474,473]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug86","uniquename":"SJAG_01505"},{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"}],"genes_by_uniquename":{"HGNC:29526":null,"SJAG_01510":null,"SPAC57A7.12":null,"YHR064C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.34.10","interpro_id":"IPR029047","interpro_name":"Heat shock protein 70kD, peptide-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":543,"score":3.099999958067201e-6,"start":408}],"model":"4po2A01","name":"Substrate Binding Domain Of DNAk; Chain A, domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.30.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":130,"score":0.0,"start":72}],"model":"5bn8A02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.420.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":394,"score":0.0,"start":11},{"end":368,"score":0.0,"start":196}],"model":"5bn8A01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.640.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":320,"score":0.0,"start":238}],"model":"5bn8A04","name":"Actin; Chain A, domain 4"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00012","interpro_id":"IPR013126","interpro_name":"Heat shock protein 70 family","interpro_type":"Family","locations":[{"end":405,"score":0.0,"start":10}],"model":"PF00012","name":"Hsp70 protein"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00301","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":22,"score":1.1000000021965661e-8,"start":9},{"end":49,"score":1.1000000021965661e-8,"start":37},{"end":170,"score":1.1000000021965661e-8,"start":150},{"end":400,"score":1.1000000021965661e-8,"start":380}],"model":"PR00301","name":""},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45639","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":396,"score":0.0,"start":9}],"model":"PTHR45639:SF32","name":"HSC70CB, ISOFORM G-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF100920","interpro_id":"IPR029047","interpro_name":"Heat shock protein 70kD, peptide-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":537,"score":2.7500000499003363e-8,"start":427}],"model":"0036037","name":"Heat shock protein 70kD (HSP70), peptide-binding domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53067","interpro_id":"IPR043129","interpro_name":"ATPase, nucleotide binding domain","interpro_type":"Homologous_superfamily","locations":[{"end":190,"score":3.110000100140015e-29,"start":8},{"end":396,"score":6.790000116676687e-39,"start":200}],"model":"0047192","name":"Actin-like ATPase domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":1787868,"start_pos":1786135,"strand":"forward"},"low_complexity_region_coords":[[474,490]],"name":"ssz1","ortholog_annotations":[{"gene_uniquename":"SJAG_01510","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29526","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01510","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A7.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01510","ortholog_taxonid":4932,"ortholog_uniquename":"YHR064C","reference_uniquename":"PMID:29761456"}],"product":"heat shock protein Ssz1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0098772","GO:0005829","GO:0016887","GO:0006457","GO:0051604","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000774":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0016887":null,"GO:0042026":null,"GO:0051083":null,"GO:0140662":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01510.1"],"transcripts_by_uniquename":{"SJAG_01510.1":null},"uniprot_identifier":"B6JY51","uniquename":"SJAG_01510"}


id: SJAG_01511
data:
  {"coiled_coil_coords":[[307,327]],"cv_annotations":{"biological_process":[{"annotations":[94121],"is_not":false,"summary":null,"term":"GO:0031445"},{"annotations":[94122],"is_not":false,"summary":null,"term":"GO:1905744"}],"cellular_component":[{"annotations":[76949],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[76948],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[94124],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR001876","UniProtKB/TrEMBL:B6JY52","EnsemblGenomes-Tr:EEB06470","GOA:B6JY52","EnsemblGenomes-Gn:SJAG_01511","InterPro:IPR035979"],"deletion_viability":"unknown","disordered_region_coords":[[214,215],[220,233],[239,242],[302,306],[309,312],[328,331],[422,421],[335,410]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"meu27","uniquename":"SJAG_01506"},{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"}],"genes_by_uniquename":{"HGNC:9896":null,"HGNC:9902":null,"HGNC:9903":null,"SJAG_01511":null,"SPAC57A7.13":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01358","interpro_id":"IPR001876","interpro_name":"Zinc finger, RanBP2-type","interpro_type":"Domain","locations":[{"end":49,"score":0.0,"start":30}],"model":"PS01358","name":"Zinc finger RanBP2-type signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50199","interpro_id":"IPR001876","interpro_name":"Zinc finger, RanBP2-type","interpro_type":"Domain","locations":[{"end":55,"score":0.0,"start":26}],"model":"PS50199","name":"Zinc finger RanBP2 type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13948","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":162,"score":6.699999681528348e-33,"start":1}],"model":"PTHR13948:SF3","name":"RNA-BINDING PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":183,"score":1.3000000365082087e-7,"start":75}],"model":"0046785","name":"RNA-binding domain, RBD"}],"location":{"chromosome_name":"supercont5.3","end_pos":1789960,"start_pos":1788573,"strand":"forward"},"low_complexity_region_coords":[[411,421]],"name":"rbm10","ortholog_annotations":[{"gene_uniquename":"SJAG_01511","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9896","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01511","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9902","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01511","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9903","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01511","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A7.13","reference_uniquename":"PMID:21511999"}],"product":"RNA-binding protein Rbm10","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0006325","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005634":null,"GO:0008270":null,"GO:0031445":null,"GO:1905744":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01511.1"],"transcripts_by_uniquename":{"SJAG_01511.1":null},"uniprot_identifier":"B6JY52","uniquename":"SJAG_01511"}


id: SJAG_01512
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94212],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[88646],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[94210],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[88652],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[94214],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR035987","UniProtKB/TrEMBL:B6JY53","EnsemblGenomes-Gn:SJAG_01512","InterPro:IPR000630","EnsemblGenomes-Tr:EEB06471","GOA:B6JY53"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rnf13","uniquename":"SJAG_01507"},{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"}],"genes_by_uniquename":{"HGNC:10389":null,"SJAG_01512":null,"SPAC22A12.04c":null,"SPAC5D6.01":null,"YJL190C":null,"YLR367W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1370.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":69,"score":4.299999844952191e-33,"start":1}],"model":"3j7aK01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1490.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":130,"score":1.2000000284906736e-32,"start":70}],"model":"2xzmH02","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00410","interpro_id":"IPR000630","interpro_name":"Ribosomal protein S8","interpro_type":"Family","locations":[{"end":130,"score":2.4999999206638063e-22,"start":7}],"model":"PF00410","name":"Ribosomal protein S8"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00053","interpro_id":"IPR000630","interpro_name":"Ribosomal protein S8","interpro_type":"Family","locations":[{"end":117,"score":0.0,"start":100}],"model":"PS00053","name":"Ribosomal protein S8 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11758","interpro_id":"IPR000630","interpro_name":"Ribosomal protein S8","interpro_type":"Family","locations":[{"end":129,"score":0.0,"start":1}],"model":"PTHR11758:SF16","name":"40S RIBOSOMAL PROTEIN S15A"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56047","interpro_id":"IPR035987","interpro_name":"Ribosomal protein S8 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":130,"score":9.939410007455927e-42,"start":4}],"model":"0038894","name":"Ribosomal protein S8"}],"location":{"chromosome_name":"supercont5.3","end_pos":1790731,"start_pos":1790339,"strand":"forward"},"name":"rps22b","ortholog_annotations":[{"gene_uniquename":"SJAG_01512","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10389","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01512","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22A12.04c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01512","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC5D6.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01512","ortholog_taxonid":4932,"ortholog_uniquename":"YJL190C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01512","ortholog_taxonid":4932,"ortholog_uniquename":"YLR367W","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S15a","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0022626","GO:0005198","GO:0005829","GO:0010494","GO:0005634","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005634":null,"GO:0010494":null,"GO:0022627":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01512.1"],"transcripts_by_uniquename":{"SJAG_01512.1":null},"uniprot_identifier":"B6JY53","uniquename":"SJAG_01512"}


id: SJAG_01513
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94218],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[94216],"is_not":false,"summary":null,"term":"GO:1990483"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06472","EnsemblGenomes-Gn:SJAG_01513","UniProtKB/TrEMBL:B6JY54"],"deletion_viability":"unknown","disordered_region_coords":[[1,48],[50,52],[114,117],[217,246],[164,188],[202,201]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec21","uniquename":"SJAG_01508"},{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"}],"genes_by_uniquename":{"SJAG_01513":null,"SPAC5D6.02c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1792215,"start_pos":1791475,"strand":"reverse"},"low_complexity_region_coords":[[189,201],[202,216]],"name":"mug165","ortholog_annotations":[{"gene_uniquename":"SJAG_01513","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC5D6.02c","reference_uniquename":"PMID:21511999"}],"product":"Clr6 histone deacetylase complex subunit Mug165","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005654","GO:0006351","GO:0005634","GO:0006325","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0045815":null,"GO:1990483":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01513.1"],"transcripts_by_uniquename":{"SJAG_01513.1":null},"uniprot_identifier":"B6JY54","uniquename":"SJAG_01513"}


id: SJAG_01514
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94221],"is_not":false,"summary":null,"term":"GO:0055085"}],"cellular_component":[{"annotations":[94219],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[94220],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[94222],"is_not":false,"summary":null,"term":"GO:0022857"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY55","EnsemblGenomes-Gn:SJAG_01514","InterPro:IPR004776","GOA:B6JY55","EnsemblGenomes-Tr:EEB06473"],"deletion_viability":"unknown","disordered_region_coords":[[186,199],[217,218],[222,227],[251,253],[255,260],[262,266],[357,361]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mip1","uniquename":"SJAG_01509"},{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"}],"genes_by_uniquename":{"SJAG_01514":null,"SPAC5D6.04":null,"YBR287W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03547","interpro_id":"IPR004776","interpro_name":"Membrane transport protein","interpro_type":"Family","locations":[{"end":456,"score":0.0,"start":18}],"model":"PF03547","name":"Membrane transport protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR31794","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":243,"score":0.0,"start":8}],"model":"PTHR31794:SF2","name":"AUXIN EFFLUX TRANSPORTER FAMILY PROTEIN (EUROFUNG)"}],"location":{"chromosome_name":"supercont5.3","end_pos":1794751,"start_pos":1792980,"strand":"forward"},"low_complexity_region_coords":[[459,466]],"ortholog_annotations":[{"gene_uniquename":"SJAG_01514","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC5D6.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01514","ortholog_taxonid":4932,"ortholog_uniquename":"YBR287W","reference_uniquename":"PMID:29761456"}],"product":"auxin family transmembrane transporter","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0055085","GO:0022857"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0016020":null,"GO:0022857":null,"GO:0055085":null},"tm_domain_coords":[[23,41],[48,68],[78,100],[282,304],[324,346],[372,394],[409,431],[444,466]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01514.1"],"transcripts_by_uniquename":{"SJAG_01514.1":null},"uniprot_identifier":"B6JY55","uniquename":"SJAG_01514"}


id: SJAG_01515
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94242],"is_not":false,"summary":null,"term":"GO:1990946"},{"annotations":[94243],"is_not":false,"summary":null,"term":"GO:1990949"},{"annotations":[94244],"is_not":false,"summary":null,"term":"GO:1902103"}],"cellular_component":[{"annotations":[94240],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94241],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[94245],"is_not":false,"summary":null,"term":"GO:1990948"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01515","EnsemblGenomes-Tr:EEB06474","UniProtKB/TrEMBL:B6JY56"],"deletion_viability":"unknown","disordered_region_coords":[[1,11],[14,18],[81,90],[102,122]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ssz1","uniquename":"SJAG_01510"},{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"}],"genes_by_uniquename":{"SJAG_01515":null,"SPAC5D6.08c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1795862,"start_pos":1795418,"strand":"reverse"},"low_complexity_region_coords":[[58,69]],"name":"mes1","ortholog_annotations":[{"gene_uniquename":"SJAG_01515","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC5D6.08c"}],"product":"meiotic APC inhibitor Mes1","references_by_uniquename":{"GO_REF:0000107":null},"subset_termids":["GO:0098772","GO:0005634","GO:0030234","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:1902103":null,"GO:1990946":null,"GO:1990948":null,"GO:1990949":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01515.1"],"transcripts_by_uniquename":{"SJAG_01515.1":null},"uniprot_identifier":"B6JY56","uniquename":"SJAG_01515"}


id: SJAG_01516
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94262],"is_not":false,"summary":null,"term":"GO:0030968"},{"annotations":[76634],"is_not":false,"summary":null,"term":"GO:0007030"},{"annotations":[76632],"is_not":false,"summary":null,"term":"GO:0043001"},{"annotations":[76628],"is_not":false,"summary":null,"term":"GO:0048194"},{"annotations":[94266],"is_not":false,"summary":null,"term":"GO:0034067"},{"annotations":[76633],"is_not":false,"summary":null,"term":"GO:0006890"}],"cellular_component":[{"annotations":[76630],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76631],"is_not":false,"summary":null,"term":"GO:0031985"},{"annotations":[66550],"is_not":false,"summary":null,"term":"GO:0000139"},{"annotations":[94260],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[76629],"is_not":false,"summary":null,"term":"GO:0005802"}],"molecular_function":[{"annotations":[76635],"is_not":false,"summary":null,"term":"GO:0070273"}]},"dbxrefs":["InterPro:IPR038261","UniProtKB/TrEMBL:B6JY57","GOA:B6JY57","InterPro:IPR008628","EnsemblGenomes-Gn:SJAG_01516","EnsemblGenomes-Tr:EEB06475"],"deletion_viability":"unknown","disordered_region_coords":[[6,52],[54,58]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rbm10","uniquename":"SJAG_01511"},{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"}],"genes_by_uniquename":{"HGNC:15452":null,"HGNC:24882":null,"SJAG_01516":null,"SPAC5D6.13":null,"YDR372C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.3630.10","interpro_id":"IPR038261","interpro_name":"Golgi phosphoprotein 3-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":339,"score":0.0,"start":59}],"model":"2zihC00","name":"yeast vps74-n-term truncation variant domain like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05719","interpro_id":"IPR008628","interpro_name":"Golgi phosphoprotein 3-like","interpro_type":"Family","locations":[{"end":289,"score":0.0,"start":64}],"model":"PF05719","name":"Golgi phosphoprotein 3 (GPP34)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12704","interpro_id":"IPR008628","interpro_name":"Golgi phosphoprotein 3-like","interpro_type":"Family","locations":[{"end":338,"score":0.0,"start":2}],"model":"PTHR12704:SF2","name":"TRANS-GOLGI PROTEIN GMX33"}],"location":{"chromosome_name":"supercont5.3","end_pos":1797975,"start_pos":1796956,"strand":"reverse"},"name":"gpp74","ortholog_annotations":[{"gene_uniquename":"SJAG_01516","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15452","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01516","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24882","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01516","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC5D6.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01516","ortholog_taxonid":4932,"ortholog_uniquename":"YDR372C","reference_uniquename":"PMID:29761456"}],"product":"Golgi phosphoprotein 3 family Vps74","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005829","GO:0061024","GO:0023052","GO:0005794","GO:0008289","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005634":null,"GO:0005802":null,"GO:0005829":null,"GO:0006890":null,"GO:0007030":null,"GO:0030968":null,"GO:0031985":null,"GO:0034067":null,"GO:0043001":null,"GO:0048194":null,"GO:0070273":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01516.1"],"transcripts_by_uniquename":{"SJAG_01516.1":null},"uniprot_identifier":"B6JY57","uniquename":"SJAG_01516"}


id: SJAG_01517
data:
  {"coiled_coil_coords":[[129,148]],"cv_annotations":{"biological_process":[{"annotations":[94254],"is_not":false,"summary":null,"term":"GO:0070131"},{"annotations":[94255],"is_not":false,"summary":null,"term":"GO:0000376"}],"cellular_component":[{"annotations":[94252],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[94256],"is_not":false,"summary":null,"term":"GO:0008494"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01517","EnsemblGenomes-Tr:EEB06476","InterPro:IPR040009","UniProtKB/TrEMBL:B6JY58"],"deletion_viability":"unknown","disordered_region_coords":[[12,35],[57,74],[130,134],[137,141],[148,148],[183,186],[188,192],[261,267],[306,306]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps22b","uniquename":"SJAG_01512"},{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"}],"genes_by_uniquename":{"SJAG_01517":null,"SPAC5D6.12":null,"YDL044C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF19189","interpro_id":"IPR043837","interpro_name":"Mtf2-like, C-terminal domain","interpro_type":"Domain","locations":[{"end":297,"score":6.599999936293514e-32,"start":152}],"model":"PF19189","name":"Mtf2 family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR39468","interpro_id":"IPR040009","interpro_name":"Protein Mtf2/C5D6.12-like","interpro_type":"Family","locations":[{"end":296,"score":1.5000000583807998e-16,"start":196}],"model":"PTHR39468:SF1","name":"CHROMOSOME 7, WHOLE GENOME SHOTGUN SEQUENCE"}],"location":{"chromosome_name":"supercont5.3","end_pos":1799194,"start_pos":1798274,"strand":"reverse"},"low_complexity_region_coords":[[122,128],[195,208]],"name":"mtf2","ortholog_annotations":[{"gene_uniquename":"SJAG_01517","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC5D6.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01517","ortholog_taxonid":4932,"ortholog_uniquename":"YDL044C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial translation factor Mtf2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0140053","GO:0045182"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000376":null,"GO:0005759":null,"GO:0008494":null,"GO:0070131":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01517.1"],"transcripts_by_uniquename":{"SJAG_01517.1":null},"uniprot_identifier":"B6JY58","uniquename":"SJAG_01517"}


id: SJAG_01518
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76435],"is_not":false,"summary":null,"term":"GO:0070126"}],"cellular_component":[{"annotations":[91536],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[91537],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[91540],"is_not":false,"summary":null,"term":"GO:0003747"}]},"dbxrefs":["InterPro:IPR005139","UniProtKB/TrEMBL:B6JY59","InterPro:IPR000352","EnsemblGenomes-Gn:SJAG_01518","EnsemblGenomes-Tr:EEB06477","GOA:B6JY59"],"deletion_viability":"unknown","disordered_region_coords":[[67,75],[229,231],[233,240],[272,275],[278,294],[305,310],[317,318],[333,355],[359,360],[418,424]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug165","uniquename":"SJAG_01513"},{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"}],"genes_by_uniquename":{"HGNC:21051":null,"HGNC:7469":null,"SJAG_01518":null,"SPAC2F7.17":null,"YGL143C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.160.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":356,"score":0.0,"start":268}],"model":"2ihr103","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.1660","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":387,"score":0.0,"start":158}],"model":"2ihr102","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00472","interpro_id":"IPR000352","interpro_name":"Peptide chain release factor class I","interpro_type":"Domain","locations":[{"end":371,"score":2.000000047484456e-33,"start":264}],"model":"PF00472","name":"RF-1 domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03462","interpro_id":"IPR005139","interpro_name":"Peptide chain release factor","interpro_type":"Domain","locations":[{"end":250,"score":1.2611686178923354e-44,"start":66}],"model":"PF03462","name":"PCRF domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00745","interpro_id":"IPR000352","interpro_name":"Peptide chain release factor class I","interpro_type":"Domain","locations":[{"end":294,"score":0.0,"start":278}],"model":"PS00745","name":"Prokaryotic-type class I peptide chain release factors signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43804","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":410,"score":0.0,"start":63}],"model":"PTHR43804:SF7","name":"LD18447P"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00937","interpro_id":"IPR005139","interpro_name":"Peptide chain release factor","interpro_type":"Domain","locations":[{"end":225,"score":1.1000000155791727e-22,"start":111}],"model":"SM00937","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF75620","interpro_id":"IPR045853","interpro_name":"Peptide chain release factor class I superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":403,"score":0.0,"start":89}],"model":"0053727","name":"Release factor"}],"location":{"chromosome_name":"supercont5.3","end_pos":1800957,"start_pos":1799563,"strand":"reverse"},"low_complexity_region_coords":[[402,415]],"name":"mrf1","ortholog_annotations":[{"gene_uniquename":"SJAG_01518","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21051","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01518","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7469","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01518","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC2F7.17","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01518","ortholog_taxonid":4932,"ortholog_uniquename":"YGL143C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial translation release factor","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0045182","GO:0140053","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003747":null,"GO:0005743":null,"GO:0005759":null,"GO:0070126":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01518.1"],"transcripts_by_uniquename":{"SJAG_01518.1":null},"uniprot_identifier":"B6JY59","uniquename":"SJAG_01518"}


id: SJAG_01519
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91528],"is_not":false,"summary":null,"term":"GO:0006654"},{"annotations":[91529],"is_not":false,"summary":null,"term":"GO:0046488"},{"annotations":[91530],"is_not":false,"summary":null,"term":"GO:0048015"},{"annotations":[73975],"is_not":false,"summary":null,"term":"GO:0009395"}],"cellular_component":[{"annotations":[91527],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[91532],"is_not":false,"summary":null,"term":"GO:0070290"},{"annotations":[91533],"is_not":false,"summary":null,"term":"GO:0032266"},{"annotations":[73976],"is_not":false,"summary":null,"term":"GO:0004630"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06478","EnsemblGenomes-Gn:SJAG_01519","InterPro:IPR001683","UniProtKB/TrEMBL:B6JY60","InterPro:IPR015679","InterPro:IPR016555","GOA:B6JY60","InterPro:IPR001736"],"deletion_viability":"unknown","disordered_region_coords":[[1,114],[1015,1017],[1020,1022],[1053,1058],[1067,1093],[1128,1141],[1145,1149],[1175,1176],[1243,1246],[1250,1273]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01514"},{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"}],"genes_by_uniquename":{"HGNC:9067":null,"HGNC:9068":null,"SJAG_01519":null,"SPAC2F7.16c":null,"YKR031C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.870.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":743,"score":1.199999961918627e-20,"start":498},{"end":975,"score":2.3999999113140872e-27,"start":754}],"model":"1v0uA01","name":"Endonuclease Chain A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00614","interpro_id":"IPR001736","interpro_name":"Phospholipase D/Transphosphatidylase","interpro_type":"Domain","locations":[{"end":636,"score":3.4999999343199306e-7,"start":610},{"end":946,"score":9.999999747378752e-6,"start":923}],"model":"PF00614","name":"Phospholipase D Active site motif"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00787","interpro_id":"IPR001683","interpro_name":"Phox homology","interpro_type":"Domain","locations":[{"end":345,"score":2.7000000955013093e-6,"start":209}],"model":"PF00787","name":"PX domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF009376","interpro_id":"IPR016555","interpro_name":"Phospholipase D, eukaryotic type","interpro_type":"Family","locations":[{"end":1334,"score":0.0,"start":2}],"model":"PIRSF009376","name":"Phospholipase D, eukaryotic type"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50035","interpro_id":"IPR001736","interpro_name":"Phospholipase D/Transphosphatidylase","interpro_type":"Domain","locations":[{"end":636,"score":0.0,"start":609},{"end":946,"score":0.0,"start":919}],"model":"PS50035","name":"Phospholipase D phosphodiesterase active site profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR18896","interpro_id":"IPR015679","interpro_name":"Phospholipase D family","interpro_type":"Family","locations":[{"end":1309,"score":0.0,"start":437}],"model":"PTHR18896:SF76","name":"PHOSPHOLIPASE D"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00155","interpro_id":"IPR001736","interpro_name":"Phospholipase D/Transphosphatidylase","interpro_type":"Domain","locations":[{"end":636,"score":0.000018000000636675395,"start":609},{"end":946,"score":0.000022000000171829015,"start":919}],"model":"SM00155","name":"Phospholipase D. Active site motifs."},{"dbname":"SMART","evidence":"Smart scan","id":"SM00312","interpro_id":"IPR001683","interpro_name":"Phox homology","interpro_type":"Domain","locations":[{"end":346,"score":0.00002700000004551839,"start":179}],"model":"SM00312","name":"PhoX homologous domain, present in p47phox and p40phox."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56024","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":747,"score":3.340695538950364e-42,"start":449},{"end":962,"score":4.259999757841587e-25,"start":749}],"model":"0046667","name":"Phospholipase D/nuclease"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01254","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":478,"score":4.93845604797352e-41,"start":337}],"model":"cd01254","name":"Phospholipase D pleckstrin homology (PH) domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd09138","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":647,"score":0.0,"start":502}],"model":"cd09138","name":"Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd09141","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":962,"score":0.0,"start":783}],"model":"cd09141","name":"Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1805394,"start_pos":1801295,"strand":"forward"},"low_complexity_region_coords":[[221,240],[281,301]],"name":"pld1","ortholog_annotations":[{"gene_uniquename":"SJAG_01519","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9067","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01519","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9068","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01519","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC2F7.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01519","ortholog_taxonid":4932,"ortholog_uniquename":"YKR031C","reference_uniquename":"PMID:29761456"}],"product":"phospholipase D, Pld1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0023052","GO:0006629","GO:0016788","GO:0005829","GO:0008289"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004630":null,"GO:0005829":null,"GO:0006654":null,"GO:0009395":null,"GO:0032266":null,"GO:0046488":null,"GO:0048015":null,"GO:0070290":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01519.1"],"transcripts_by_uniquename":{"SJAG_01519.1":null},"uniprot_identifier":"B6JY60","uniquename":"SJAG_01519"}


id: SJAG_01520
data:
  {"coiled_coil_coords":[[38,58]],"cv_annotations":{"biological_process":[{"annotations":[91525],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[91524],"is_not":false,"summary":null,"term":"GO:0005763"}],"molecular_function":[{"annotations":[91526],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR019349","UniProtKB/TrEMBL:B6JY61","EnsemblGenomes-Gn:SJAG_01520","InterPro:IPR039848","EnsemblGenomes-Tr:EEB06479","GOA:B6JY61"],"deletion_viability":"unknown","disordered_region_coords":[[31,37]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mes1","uniquename":"SJAG_01515"},{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"}],"genes_by_uniquename":{"HGNC:16635":null,"SJAG_01520":null,"SPAC2F7.15":null,"YDR175C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10213","interpro_id":"IPR019349","interpro_name":"Ribosomal protein S24/S35, mitochondrial, conserved domain","interpro_type":"Domain","locations":[{"end":201,"score":2.800000062604757e-22,"start":85}],"model":"PF10213","name":"Mitochondrial ribosomal subunit protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13490","interpro_id":"IPR039848","interpro_name":"Ribosomal protein S24/S35, mitochondrial","interpro_type":"Family","locations":[{"end":188,"score":2.3000000189311474e-15,"start":25}],"model":"PTHR13490:SF0","name":"MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28"}],"location":{"chromosome_name":"supercont5.3","end_pos":1806145,"start_pos":1805405,"strand":"reverse"},"name":"rsm24","ortholog_annotations":[{"gene_uniquename":"SJAG_01520","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16635","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01520","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC2F7.15","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01520","ortholog_taxonid":4932,"ortholog_uniquename":"YDR175C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit S35","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0140053","GO:0005198","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005763":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01520.1"],"transcripts_by_uniquename":{"SJAG_01520.1":null},"uniprot_identifier":"B6JY61","uniquename":"SJAG_01520"}


id: SJAG_01521
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74505],"is_not":false,"summary":null,"term":"GO:0071034"},{"annotations":[74511],"is_not":false,"summary":null,"term":"GO:0043928"},{"annotations":[74512],"is_not":false,"summary":null,"term":"GO:0000467"},{"annotations":[91513],"is_not":false,"summary":null,"term":"GO:0070651"},{"annotations":[91514],"is_not":false,"summary":null,"term":"GO:0071028"},{"annotations":[91515],"is_not":false,"summary":null,"term":"GO:0071042"},{"annotations":[74506],"is_not":false,"summary":null,"term":"GO:0071035"},{"annotations":[74507],"is_not":false,"summary":null,"term":"GO:0071038"},{"annotations":[91518],"is_not":false,"summary":null,"term":"GO:0070478"},{"annotations":[91519],"is_not":false,"summary":null,"term":"GO:0070481"},{"annotations":[74508],"is_not":false,"summary":null,"term":"GO:0071051"},{"annotations":[74510],"is_not":false,"summary":null,"term":"GO:0034475"}],"cellular_component":[{"annotations":[91504],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[74504],"is_not":false,"summary":null,"term":"GO:0000177"},{"annotations":[91506],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74503],"is_not":false,"summary":null,"term":"GO:0000176"}],"molecular_function":[{"annotations":[74502],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR004088","InterPro:IPR025721","GOA:B6JY62","EnsemblGenomes-Tr:EEB06480","InterPro:IPR026699","InterPro:IPR022967","InterPro:IPR036612","EnsemblGenomes-Gn:SJAG_01521","InterPro:IPR012340","UniProtKB/TrEMBL:B6JY62"],"deletion_viability":"unknown","disordered_region_coords":[[12,14],[19,35],[37,42],[65,66]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gpp74","uniquename":"SJAG_01516"},{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"}],"genes_by_uniquename":{"HGNC:17097":null,"SJAG_01521":null,"SPAC2F7.14c":null,"YHR069C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.100","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":103,"score":2.4000000653884828e-26,"start":52}],"model":"2nn6H01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.140","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":194,"score":2.0999999838446953e-22,"start":104}],"model":"2je6I02","name":"Nucleic acid-binding proteins"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14382","interpro_id":"IPR025721","interpro_name":"Exosome complex component, N-terminal domain","interpro_type":"Domain","locations":[{"end":90,"score":2.5000000421559588e-17,"start":53}],"model":"PF14382","name":"Exosome complex exonuclease RRP4 N-terminal region"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF15985","interpro_id":"IPR004088","interpro_name":"K Homology domain, type 1","interpro_type":"Domain","locations":[{"end":236,"score":1.199999957179898e-7,"start":196}],"model":"PF15985","name":"KH domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21321","interpro_id":"IPR026699","interpro_name":"Exosome complex RNA-binding protein 1/RRP40/RRP4","interpro_type":"Family","locations":[{"end":319,"score":0.0,"start":49}],"model":"PTHR21321:SF4","name":"PNAS-3 RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00316","interpro_id":"IPR022967","interpro_name":"RNA-binding domain, S1","interpro_type":"Domain","locations":[{"end":186,"score":0.000045000000682193786,"start":106}],"model":"SM00316","name":"Ribosomal protein S1-like RNA-binding domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF110324","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":101,"score":9.41999977370836e-14,"start":51}],"model":"0053735","name":"Ribosomal L27 protein-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50249","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":193,"score":1.4600000359261338e-26,"start":101}],"model":"0054279","name":"Nucleic acid-binding proteins"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54791","interpro_id":"IPR036612","interpro_name":"K Homology domain, type 1 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":324,"score":3.1499999535651632e-31,"start":195}],"model":"0054281","name":"Eukaryotic type KH-domain (KH-domain type I)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd05789","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":193,"score":1.3722495471593636e-40,"start":102}],"model":"cd05789","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd22525","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":324,"score":2.0550599696112244e-38,"start":196}],"model":"cd22525","name":"type I K homology (KH) RNA-binding domain found in exosome complex component Rrp4 from eukaryote"}],"location":{"chromosome_name":"supercont5.3","end_pos":1807683,"start_pos":1806573,"strand":"forward"},"low_complexity_region_coords":[[15,46]],"name":"rrp4","ortholog_annotations":[{"gene_uniquename":"SJAG_01521","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17097","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01521","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC2F7.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01521","ortholog_taxonid":4932,"ortholog_uniquename":"YHR069C","reference_uniquename":"PMID:29761456"}],"product":"exosome subunit Rrp4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0042254","GO:0005634","GO:0005829","GO:0016074","GO:0016071","GO:0016073","GO:0005694","GO:0006399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0000467":null,"GO:0000785":null,"GO:0003723":null,"GO:0005829":null,"GO:0034475":null,"GO:0043928":null,"GO:0070478":null,"GO:0070481":null,"GO:0070651":null,"GO:0071028":null,"GO:0071034":null,"GO:0071035":null,"GO:0071038":null,"GO:0071042":null,"GO:0071051":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01521.1"],"transcripts_by_uniquename":{"SJAG_01521.1":null},"uniprot_identifier":"B6JY62","uniquename":"SJAG_01521"}


id: SJAG_01522
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91500],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[70382],"is_not":false,"summary":null,"term":"GO:0006436"}],"cellular_component":[{"annotations":[91499],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[91502],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[70381],"is_not":false,"summary":null,"term":"GO:0004830"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01522","InterPro:IPR002305","EnsemblGenomes-Tr:EEB06481","UniProtKB/TrEMBL:B6JY63","GOA:B6JY63","InterPro:IPR014729","InterPro:IPR002306"],"deletion_viability":"unknown","disordered_region_coords":[[308,316]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mtf2","uniquename":"SJAG_01517"},{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"}],"genes_by_uniquename":{"HGNC:12729":null,"SJAG_01522":null,"SPAC2F7.13c":null,"YOL097C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.240.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":395,"score":0.0,"start":280}],"model":"3kt3A02","name":"Tyrosyl-Transfer RNA Synthetase"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":279,"score":0.0,"start":7}],"model":"3hzrA01","name":"HUPs"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00579","interpro_id":"IPR002305","interpro_name":"Aminoacyl-tRNA synthetase, class Ic","interpro_type":"Family","locations":[{"end":367,"score":5.80000004246637e-27,"start":80}],"model":"PF00579","name":"tRNA synthetases class I (W and Y)"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR01039","interpro_id":"IPR002306","interpro_name":"Tryptophan-tRNA ligase","interpro_type":"Family","locations":[{"end":112,"score":9.600000187598221e-24,"start":96},{"end":168,"score":9.600000187598221e-24,"start":149},{"end":252,"score":9.600000187598221e-24,"start":231},{"end":285,"score":9.600000187598221e-24,"start":275}],"model":"PR01039","name":""},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10055","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":388,"score":0.0,"start":4}],"model":"PTHR10055:SF1","name":"TRYPTOPHANYL-TRNA SYNTHETASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52374","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":383,"score":0.0,"start":5}],"model":"0049118","name":"Nucleotidylyl transferase"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00233","interpro_id":"IPR002306","interpro_name":"Tryptophan-tRNA ligase","interpro_type":"Family","locations":[{"end":393,"score":0.0,"start":81}],"model":"TIGR00233","name":"tryptophan--tRNA ligase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00806","interpro_id":"IPR002306","interpro_name":"Tryptophan-tRNA ligase","interpro_type":"Family","locations":[{"end":367,"score":0.0,"start":84}],"model":"cd00806","name":"catalytic core domain of tryptophanyl-tRNA synthetase"}],"location":{"chromosome_name":"supercont5.3","end_pos":1809681,"start_pos":1808291,"strand":"forward"},"low_complexity_region_coords":[[292,300],[333,346]],"name":"wrs1","ortholog_annotations":[{"gene_uniquename":"SJAG_01522","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12729","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01522","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC2F7.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01522","ortholog_taxonid":4932,"ortholog_uniquename":"YOL097C","reference_uniquename":"PMID:29761456"}],"product":"cytoplasmic tryptophan-tRNA ligase Wrs1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0006520","GO:0005829","GO:0002181","GO:0006399","GO:0140101","GO:0140098","GO:0016874"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0004830":null,"GO:0005524":null,"GO:0005829":null,"GO:0006436":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01522.1"],"transcripts_by_uniquename":{"SJAG_01522.1":null},"uniprot_identifier":"B6JY63","uniquename":"SJAG_01522"}


id: SJAG_01523
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85641],"is_not":false,"summary":null,"term":"GO:0051123"}],"cellular_component":[{"annotations":[76295],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[76293],"is_not":false,"summary":null,"term":"GO:0097550"}],"molecular_function":[{"annotations":[76294],"is_not":false,"summary":null,"term":"GO:0016251"},{"annotations":[76292],"is_not":false,"summary":null,"term":"GO:0017025"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01523","InterPro:IPR000812","InterPro:IPR013137","InterPro:IPR023486","InterPro:IPR036915","UniProtKB/TrEMBL:B6JY64","InterPro:IPR013150","GOA:B6JY64","InterPro:IPR013763","EnsemblGenomes-Tr:EEB06482"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[63,71],[73,76],[79,80],[337,339]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrf1","uniquename":"SJAG_01518"},{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"}],"genes_by_uniquename":{"HGNC:4648":null,"SJAG_01523":null,"SPAC16E8.16":null,"YPR086W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.472.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":337,"score":2.899999982714586e-26,"start":231}],"model":"1c9bA02","name":"Cyclin-like"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.472.170","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":206,"score":0.0,"start":18}],"model":"4bbrM00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00382","interpro_id":"IPR013150","interpro_name":"Transcription factor TFIIB, cyclin-like domain","interpro_type":"Domain","locations":[{"end":203,"score":1.300000016159462e-27,"start":116},{"end":314,"score":3.7000000764528895e-19,"start":227}],"model":"PF00382","name":"Transcription factor TFIIB repeat"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08271","interpro_id":"IPR013137","interpro_name":"Zinc finger, TFIIB-type","interpro_type":"Domain","locations":[{"end":62,"score":4.200000156689976e-12,"start":18}],"model":"PF08271","name":"TFIIB zinc-binding"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00685","interpro_id":"IPR000812","interpro_name":"Transcription factor TFIIB","interpro_type":"Family","locations":[{"end":54,"score":0.0,"start":34},{"end":69,"score":0.0,"start":56},{"end":92,"score":0.0,"start":71},{"end":184,"score":0.0,"start":165},{"end":206,"score":0.0,"start":191},{"end":253,"score":0.0,"start":235},{"end":285,"score":0.0,"start":269},{"end":315,"score":0.0,"start":301}],"model":"PR00685","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00782","interpro_id":"IPR023486","interpro_name":"Transcription factor TFIIB, conserved site","interpro_type":"Conserved_site","locations":[{"end":172,"score":0.0,"start":157}],"model":"PS00782","name":"Transcription factor TFIIB repeat signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51134","interpro_id":"IPR013137","interpro_name":"Zinc finger, TFIIB-type","interpro_type":"Domain","locations":[{"end":49,"score":0.0,"start":16}],"model":"PS51134","name":"Zinc finger TFIIB-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11618","interpro_id":"IPR000812","interpro_name":"Transcription factor TFIIB","interpro_type":"Family","locations":[{"end":317,"score":0.0,"start":18}],"model":"PTHR11618:SF13","name":"TRANSCRIPTION INITIATION FACTOR IIB-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00385","interpro_id":"IPR013763","interpro_name":"Cyclin-like domain","interpro_type":"Domain","locations":[{"end":204,"score":1.000000013351432e-10,"start":123},{"end":315,"score":3.699999950868005e-8,"start":234}],"model":"SM00385","name":"domain present in cyclins, TFIIB and Retinoblastoma"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47954","interpro_id":"IPR036915","interpro_name":"Cyclin-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":207,"score":1.7300000066896692e-26,"start":117},{"end":329,"score":1.2899999561831818e-25,"start":231}],"model":"0035065","name":"Cyclin-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57783","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":65,"score":8.160000317591551e-15,"start":14}],"model":"0046355","name":"Zinc beta-ribbon"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd20551","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":207,"score":0.0,"start":120}],"model":"cd20551","name":"first cyclin box found in transcription initiation factor IIB (TFIIB) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1811236,"start_pos":1809999,"strand":"forward"},"name":"sua7","ortholog_annotations":[{"gene_uniquename":"SJAG_01523","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4648","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01523","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01523","ortholog_taxonid":4932,"ortholog_uniquename":"YPR086W","reference_uniquename":"PMID:29761456"}],"product":"transcription factor TFIIB","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0006351","GO:0005634","GO:0140223","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0016251":null,"GO:0017025":null,"GO:0051123":null,"GO:0097550":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01523.1"],"transcripts_by_uniquename":{"SJAG_01523.1":null},"uniprot_identifier":"B6JY64","uniquename":"SJAG_01523"}


id: SJAG_01524
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85646],"is_not":false,"summary":null,"term":"GO:0006104"},{"annotations":[74931],"is_not":false,"summary":null,"term":"GO:0006099"}],"cellular_component":[{"annotations":[74929],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[74928],"is_not":false,"summary":null,"term":"GO:0009361"}],"molecular_function":[{"annotations":[74930],"is_not":false,"summary":null,"term":"GO:0004775"}]},"dbxrefs":["GOA:B6JY65","EnsemblGenomes-Gn:SJAG_01524","InterPro:IPR033847","InterPro:IPR005810","InterPro:IPR003781","InterPro:IPR017440","EnsemblGenomes-Tr:EEB06483","InterPro:IPR036291","InterPro:IPR016102","InterPro:IPR005811","UniProtKB/TrEMBL:B6JY65"],"deletion_viability":"unknown","disordered_region_coords":[[54,55],[58,60],[125,126],[141,142],[240,245]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pld1","uniquename":"SJAG_01519"},{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"}],"genes_by_uniquename":{"HGNC:11449":null,"SJAG_01524":null,"SPAC16E8.17c":null,"YOR142W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.261","interpro_id":"IPR016102","interpro_name":"Succinyl-CoA synthetase-like","interpro_type":"Homologous_superfamily","locations":[{"end":315,"score":0.0,"start":140}],"model":"5tdeB02","name":"Succinyl-CoA synthetase domains"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.720","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":139,"score":0.0,"start":15}],"model":"2yv1A01","name":"NAD(P)-binding Rossmann-like Domain"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_01988","interpro_id":"IPR005810","interpro_name":"Succinyl-CoA ligase, alpha subunit","interpro_type":"Family","locations":[{"end":312,"score":0.0,"start":19}],"model":"MF_01988","name":"Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00549","interpro_id":"IPR005811","interpro_name":"ATP-citrate lyase/succinyl-CoA ligase","interpro_type":"Domain","locations":[{"end":295,"score":4.0000000781659255e-24,"start":170}],"model":"PF00549","name":"CoA-ligase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02629","interpro_id":"IPR003781","interpro_name":"CoA-binding","interpro_type":"Domain","locations":[{"end":117,"score":1.6000000435923218e-26,"start":25}],"model":"PF02629","name":"CoA binding domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001553","interpro_id":"IPR005810","interpro_name":"Succinyl-CoA ligase, alpha subunit","interpro_type":"Family","locations":[{"end":315,"score":0.0,"start":16}],"model":"PIRSF001553","name":"Succinyl-CoA synthetase, alpha subunit"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR01798","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":117,"score":3.299999869728521e-38,"start":100},{"end":214,"score":3.299999869728521e-38,"start":196},{"end":240,"score":3.299999869728521e-38,"start":227},{"end":281,"score":3.299999869728521e-38,"start":264}],"model":"PR01798","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00399","interpro_id":"IPR017440","interpro_name":"ATP-citrate lyase/succinyl-CoA ligase, active site","interpro_type":"Active_site","locations":[{"end":273,"score":0.0,"start":260}],"model":"PS00399","name":"ATP-citrate lyase / succinyl-CoA ligases family active site"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01216","interpro_id":"IPR033847","interpro_name":"ATP-citrate lyase/succinyl-CoA ligase, conserved site","interpro_type":"Conserved_site","locations":[{"end":200,"score":0.0,"start":171}],"model":"PS01216","name":"ATP-citrate lyase / succinyl-CoA ligases family signature 1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11117","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":314,"score":0.0,"start":7}],"model":"PTHR11117:SF2","name":"SUCCINYL-COA LIGASE SUBUNIT ALPHA"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00881","interpro_id":"IPR003781","interpro_name":"CoA-binding","interpro_type":"Domain","locations":[{"end":118,"score":3.6000001618791536e-30,"start":22}],"model":"SM00881","name":"CoA binding domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51735","interpro_id":"IPR036291","interpro_name":"NAD(P)-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":141,"score":6.670180690186129e-42,"start":16}],"model":"0046629","name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52210","interpro_id":"IPR016102","interpro_name":"Succinyl-CoA synthetase-like","interpro_type":"Homologous_superfamily","locations":[{"end":306,"score":0.0,"start":142}],"model":"0046630","name":"Succinyl-CoA synthetase domains"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01019","interpro_id":"IPR005810","interpro_name":"Succinyl-CoA ligase, alpha subunit","interpro_type":"Family","locations":[{"end":310,"score":0.0,"start":22}],"model":"TIGR01019","name":"succinate--CoA ligase subunit alpha"}],"location":{"chromosome_name":"supercont5.3","end_pos":1812926,"start_pos":1811979,"strand":"reverse"},"low_complexity_region_coords":[[88,114],[224,239],[270,283]],"ortholog_annotations":[{"gene_uniquename":"SJAG_01524","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11449","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01524","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01524","ortholog_taxonid":4932,"ortholog_uniquename":"YOR142W","reference_uniquename":"PMID:29761456"}],"product":"succinate-CoA ligase alpha subunit","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0006091","GO:0006790","GO:0005739","GO:0055086","GO:0016874"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004775":null,"GO:0005739":null,"GO:0006099":null,"GO:0006104":null,"GO:0009361":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01524.1"],"transcripts_by_uniquename":{"SJAG_01524.1":null},"uniprot_identifier":"B6JY65","uniquename":"SJAG_01524"}


id: SJAG_01525
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB06484","UniProtKB/TrEMBL:B6JY66","EnsemblGenomes-Gn:SJAG_01525"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[4,26],[60,62],[76,84]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rsm24","uniquename":"SJAG_01520"},{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"}],"genes_by_uniquename":{"SJAG_01525":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1814415,"start_pos":1813657,"strand":"reverse"},"low_complexity_region_coords":[[64,75]],"product":"Schizosaccharomyces japonicus specific protein some similarity to proteases","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01525.1"],"transcripts_by_uniquename":{"SJAG_01525.1":null},"uniprot_identifier":"B6JY66","uniquename":"SJAG_01525"}


id: SJAG_01526
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92140],"is_not":false,"summary":null,"term":"GO:0007023"},{"annotations":[92141],"is_not":false,"summary":null,"term":"GO:0007021"}],"cellular_component":[{"annotations":[92138],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[92139],"is_not":false,"summary":null,"term":"GO:1990727"}],"molecular_function":[{"annotations":[92142],"is_not":false,"summary":null,"term":"GO:0005096"}]},"dbxrefs":["InterPro:IPR016098","InterPro:IPR027684","EnsemblGenomes-Tr:EEB06485","UniProtKB/TrEMBL:B6JY67","EnsemblGenomes-Gn:SJAG_01526","GOA:B6JY67","InterPro:IPR012945"],"deletion_viability":"unknown","disordered_region_coords":[[70,72],[79,82],[152,155],[343,346],[390,391]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rrp4","uniquename":"SJAG_01521"},{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"}],"genes_by_uniquename":{"HGNC:10274":null,"HGNC:11580":null,"SJAG_01526":null,"SPAC328.08c":null,"YPL241C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.160.20.70","interpro_id":"IPR016098","interpro_name":"Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":343,"score":4.099999983964153e-8,"start":269}],"model":"3bh7B01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07986","interpro_id":"IPR012945","interpro_name":"Tubulin binding cofactor C-like domain","interpro_type":"Domain","locations":[{"end":337,"score":3.199999980552093e-7,"start":281}],"model":"PF07986","name":"Tubulin binding cofactor C"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15139","interpro_id":"IPR027684","interpro_name":"Tubulin-specific chaperone C","interpro_type":"Family","locations":[{"end":336,"score":6.599999951943658e-13,"start":129}],"model":"PTHR15139:SF0","name":"TUBULIN FOLDING COFACTOR C"}],"location":{"chromosome_name":"supercont5.3","end_pos":1816109,"start_pos":1814797,"strand":"forward"},"low_complexity_region_coords":[[19,34],[35,44]],"name":"tbc1","ortholog_annotations":[{"gene_uniquename":"SJAG_01526","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10274","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01526","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11580","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01526","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC328.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01526","ortholog_taxonid":4932,"ortholog_uniquename":"YPL241C","reference_uniquename":"PMID:29761456"}],"product":"tubulin specific chaperone cofactor C, GTPase activating protein Tbc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0098772","GO:0065003","GO:0051604","GO:0030234","GO:0006457"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005737":null,"GO:0007021":null,"GO:0007023":null,"GO:1990727":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01526.1"],"transcripts_by_uniquename":{"SJAG_01526.1":null},"uniprot_identifier":"B6JY67","uniquename":"SJAG_01526"}


id: SJAG_01527
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92135],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[71674],"is_not":false,"summary":null,"term":"GO:0030001"},{"annotations":[71678],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[92132],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[71676],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[71677],"is_not":false,"summary":null,"term":"GO:0048471"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY68","EnsemblGenomes-Tr:EEB06486","EnsemblGenomes-Gn:SJAG_01527","InterPro:IPR019325","GOA:B6JY68"],"deletion_viability":"unknown","disordered_region_coords":[[62,75],[272,273],[1,10],[22,47],[259,260]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"wrs1","uniquename":"SJAG_01522"},{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"}],"genes_by_uniquename":{"HGNC:17592":null,"HGNC:18537":null,"SJAG_01527":null,"SPAC328.07c":null,"YBR290W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10176","interpro_id":"IPR019325","interpro_name":"NEDD4/Bsd2","interpro_type":"Family","locations":[{"end":215,"score":6.400000256915361e-38,"start":100}],"model":"PF10176","name":"Protein of unknown function (DUF2370)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13396","interpro_id":"IPR019325","interpro_name":"NEDD4/Bsd2","interpro_type":"Family","locations":[{"end":265,"score":8.900000346763186e-37,"start":18}],"model":"PTHR13396:SF5","name":"NEDD4 FAMILY INTERACTING PROTEIN 1/2"}],"location":{"chromosome_name":"supercont5.3","end_pos":1817307,"start_pos":1816442,"strand":"forward"},"low_complexity_region_coords":[[11,21],[48,61],[79,88],[109,114],[252,252],[261,271]],"name":"bsd1","ortholog_annotations":[{"gene_uniquename":"SJAG_01527","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17592","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01527","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18537","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01527","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC328.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01527","ortholog_taxonid":4932,"ortholog_uniquename":"YBR290W","reference_uniquename":"PMID:29761456"}],"product":"human NEDD4 family-interacting protein ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0005794","GO:0016192","GO:0005789","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0005794":null,"GO:0006511":null,"GO:0030001":null,"GO:0045324":null,"GO:0048471":null},"tm_domain_coords":[[157,179],[226,248]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01527.1"],"transcripts_by_uniquename":{"SJAG_01527.1":null},"uniprot_identifier":"B6JY68","uniquename":"SJAG_01527"}


id: SJAG_01528
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92127],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[76437],"is_not":false,"summary":null,"term":"GO:0061136"},{"annotations":[92128],"is_not":false,"summary":null,"term":"GO:0043162"}],"cellular_component":[{"annotations":[92126],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[76438],"is_not":false,"summary":null,"term":"GO:0004843"},{"annotations":[92130],"is_not":false,"summary":null,"term":"GO:0061578"},{"annotations":[92131],"is_not":false,"summary":null,"term":"GO:0140492"},{"annotations":[76439],"is_not":false,"summary":null,"term":"GO:0070628"}]},"dbxrefs":["InterPro:IPR025305","UniProtKB/TrEMBL:B6JY69","InterPro:IPR028889","EnsemblGenomes-Gn:SJAG_01528","GOA:B6JY69","InterPro:IPR001394","InterPro:IPR018200","InterPro:IPR038765","EnsemblGenomes-Tr:EEB06487"],"deletion_viability":"unknown","disordered_region_coords":[[5,6],[101,104],[111,113],[166,169],[175,178],[720,729],[731,742],[762,778],[780,782],[851,852]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sua7","uniquename":"SJAG_01523"},{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"}],"genes_by_uniquename":{"SJAG_01528":null,"SPAC328.06":null,"YOR124C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.70.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1118,"score":0.0,"start":611}],"model":"6iikB00","name":"Cysteine proteinases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00443","interpro_id":"IPR001394","interpro_name":"Peptidase C19, ubiquitin carboxyl-terminal hydrolase","interpro_type":"Domain","locations":[{"end":1111,"score":0.0,"start":617}],"model":"PF00443","name":"Ubiquitin carboxyl-terminal hydrolase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13446","interpro_id":"IPR025305","interpro_name":"UCH repeated domain","interpro_type":"Domain","locations":[{"end":385,"score":0.0017000000225380063,"start":336},{"end":461,"score":1.499999950638209e-11,"start":400},{"end":523,"score":5.200000044273956e-13,"start":469},{"end":600,"score":6.599999992177723e-17,"start":541}],"model":"PF13446","name":"A repeated domain in UCH-protein"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00972","interpro_id":"IPR018200","interpro_name":"Ubiquitin specific protease, conserved site","interpro_type":"Conserved_site","locations":[{"end":633,"score":0.0,"start":618}],"model":"PS00972","name":"Ubiquitin specific protease (USP) domain signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00973","interpro_id":"IPR018200","interpro_name":"Ubiquitin specific protease, conserved site","interpro_type":"Conserved_site","locations":[{"end":1067,"score":0.0,"start":1050}],"model":"PS00973","name":"Ubiquitin specific protease (USP) domain signature 2"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50235","interpro_id":"IPR028889","interpro_name":"Ubiquitin specific protease domain","interpro_type":"Domain","locations":[{"end":1114,"score":0.0,"start":617}],"model":"PS50235","name":"Ubiquitin specific protease (USP) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43982","interpro_id":"IPR044635","interpro_name":"Ubiquitin carboxyl-terminal hydrolase 14-like","interpro_type":"Family","locations":[{"end":1128,"score":0.0,"start":124}],"model":"PTHR43982:SF5","name":"UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54001","interpro_id":"IPR038765","interpro_name":"Papain-like cysteine peptidase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1113,"score":0.0,"start":614}],"model":"0051855","name":"Cysteine proteinases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02666","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1112,"score":0.0,"start":616}],"model":"cd02666","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":1821443,"start_pos":1817999,"strand":"reverse"},"low_complexity_region_coords":[[38,49],[162,174],[261,273],[480,490],[606,616],[744,757],[989,998],[1002,1013]],"name":"ubp2","ortholog_annotations":[{"gene_uniquename":"SJAG_01528","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC328.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01528","ortholog_taxonid":4932,"ortholog_uniquename":"YOR124C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin C-terminal hydrolase Ubp2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0140096","GO:0005829","GO:0008233"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004843":null,"GO:0005829":null,"GO:0043161":null,"GO:0043162":null,"GO:0061136":null,"GO:0061578":null,"GO:0070628":null,"GO:0140492":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01528.1"],"transcripts_by_uniquename":{"SJAG_01528.1":null},"uniprot_identifier":"B6JY69","uniquename":"SJAG_01528"}


id: SJAG_01529
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92123],"is_not":false,"summary":null,"term":"GO:0016973"}],"cellular_component":[{"annotations":[92120],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76788],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[92122],"is_not":false,"summary":null,"term":"GO:0140453"}],"molecular_function":[{"annotations":[76787],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["InterPro:IPR000504","GOA:B6JY70","InterPro:IPR012677","UniProtKB/TrEMBL:B6JY70","InterPro:IPR035979","EnsemblGenomes-Gn:SJAG_01529","EnsemblGenomes-Tr:EEB06488"],"deletion_viability":"unknown","disordered_region_coords":[[1,16],[18,23],[62,84],[168,187],[222,226],[232,237],[281,281],[369,372],[414,438],[493,500],[506,535],[25,28],[444,462]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01524"},{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"}],"genes_by_uniquename":{"HGNC:17940":null,"HGNC:5046":null,"SJAG_01529":null,"SPAC328.05":null,"YCL011C":null,"YNL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":170,"score":1.6999999839167118e-23,"start":24},{"end":270,"score":1.1999999840067324e-23,"start":188},{"end":431,"score":8.399999935378781e-22,"start":316}],"model":"1hl6C00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00076","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":157,"score":1.2000000467046398e-15,"start":89},{"end":262,"score":2.799999967805335e-15,"start":194},{"end":397,"score":3.5999998754161235e-17,"start":330}],"model":"PF00076","name":"RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50102","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":164,"score":0.0,"start":87},{"end":269,"score":0.0,"start":192},{"end":404,"score":0.0,"start":327}],"model":"PS50102","name":"Eukaryotic RNA Recognition Motif (RRM) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23003","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":279,"score":0.0,"start":71}],"model":"PTHR23003:SF46","name":"RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00360","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":160,"score":1.0999999650920748e-20,"start":88},{"end":265,"score":1.999999936531045e-21,"start":193},{"end":400,"score":6.400000200796128e-21,"start":328}],"model":"SM00360","name":"RNA recognition motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":187,"score":2.9599999789566944e-24,"start":82},{"end":278,"score":7.120000178578393e-25,"start":187},{"end":409,"score":8.459999741308196e-25,"start":309}],"model":"0047108","name":"RNA-binding domain, RBD"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00590","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":160,"score":5.239610154094643e-19,"start":89}],"model":"cd00590","name":"RNA recognition motif (RRM) superfamily"}],"location":{"chromosome_name":"supercont5.3","end_pos":1824791,"start_pos":1822360,"strand":"reverse"},"low_complexity_region_coords":[[29,61],[282,308],[463,492]],"name":"hrb1","ortholog_annotations":[{"gene_uniquename":"SJAG_01529","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17940","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01529","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5046","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01529","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC328.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01529","ortholog_taxonid":4932,"ortholog_uniquename":"YCL011C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01529","ortholog_taxonid":4932,"ortholog_uniquename":"YNL004W","reference_uniquename":"PMID:29761456"}],"product":"RNA-binding protein involved in export of mRNAs Hrb1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0006913"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005634":null,"GO:0005829":null,"GO:0016973":null,"GO:0140453":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01529.1"],"transcripts_by_uniquename":{"SJAG_01529.1":null},"uniprot_identifier":"B6JY70","uniquename":"SJAG_01529"}


id: SJAG_01530
data:
  {"coiled_coil_coords":[[64,105]],"cv_annotations":{"biological_process":[{"annotations":[92116],"is_not":false,"summary":null,"term":"GO:0051013"}],"cellular_component":[{"annotations":[92115],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[92117],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[92118],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[92119],"is_not":false,"summary":null,"term":"GO:0008568"}]},"dbxrefs":["GOA:B6JY71","UniProtKB/TrEMBL:B6JY71","InterPro:IPR003593","InterPro:IPR027417","EnsemblGenomes-Tr:EEB06489","InterPro:IPR003959","EnsemblGenomes-Gn:SJAG_01530","InterPro:IPR015415","InterPro:IPR003960"],"deletion_viability":"unknown","disordered_region_coords":[[248,298],[363,412],[487,488],[550,551],[106,145],[154,164],[186,231],[301,353]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01525"},{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"}],"genes_by_uniquename":{"HGNC:11233":null,"HGNC:13286":null,"SJAG_01530":null,"SPAC328.04":null,"YER047C":null,"YPL074W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":695,"score":0.0,"start":613}],"model":"4l15A02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":711,"score":0.0,"start":433}],"model":"4l15A01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00004","interpro_id":"IPR003959","interpro_name":"ATPase, AAA-type, core","interpro_type":"Domain","locations":[{"end":612,"score":3.599999934320121e-38,"start":474}],"model":"PF00004","name":"ATPase family associated with various cellular activities (AAA)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09336","interpro_id":"IPR015415","interpro_name":"Spastin/Vps4, C-terminal","interpro_type":"Domain","locations":[{"end":715,"score":9.500000146545062e-7,"start":681}],"model":"PF09336","name":"Vps4 C terminal oligomerisation domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00674","interpro_id":"IPR003960","interpro_name":"ATPase, AAA-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":603,"score":0.0,"start":584}],"model":"PS00674","name":"AAA-protein family signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23074","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":715,"score":0.0,"start":341}],"model":"PTHR23074:SF17","name":"AAA DOMAIN-CONTAINING"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00382","interpro_id":"IPR003593","interpro_name":"AAA+ ATPase domain","interpro_type":"Domain","locations":[{"end":614,"score":5.000000229068525e-19,"start":470}],"model":"SM00382","name":"ATPases associated with a variety of cellular activities"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":714,"score":0.0,"start":434}],"model":"0042094","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd19509","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":610,"score":0.0,"start":440}],"model":"cd19509","name":"ATPase domain of VPS4, ATAD1, K, KTNA1, Spastin, FIGL-1 and similar ATPase domains"}],"location":{"chromosome_name":"supercont5.3","end_pos":1827365,"start_pos":1825160,"strand":"reverse"},"low_complexity_region_coords":[[146,153],[165,185],[232,247],[354,362],[495,512],[568,578]],"name":"spg4","ortholog_annotations":[{"gene_uniquename":"SJAG_01530","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11233","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01530","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13286","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01530","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC328.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01530","ortholog_taxonid":4932,"ortholog_uniquename":"YER047C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01530","ortholog_taxonid":4932,"ortholog_uniquename":"YPL074W","reference_uniquename":"PMID:29761456"}],"product":"microtubule severing ATPase Spg4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140096","GO:0000226","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005737":null,"GO:0008568":null,"GO:0016887":null,"GO:0051013":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01530.1"],"transcripts_by_uniquename":{"SJAG_01530.1":null},"uniprot_identifier":"B6JY71","uniquename":"SJAG_01530"}


id: SJAG_01531
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92109],"is_not":false,"summary":null,"term":"GO:0030437"},{"annotations":[77788],"is_not":false,"summary":null,"term":"GO:0005992"},{"annotations":[77786],"is_not":false,"summary":null,"term":"GO:0070413"}],"cellular_component":[{"annotations":[77785],"is_not":false,"summary":null,"term":"GO:0005946"},{"annotations":[92108],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[77784],"is_not":false,"summary":null,"term":"GO:0003825"},{"annotations":[77787],"is_not":false,"summary":null,"term":"GO:0004805"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06490","GOA:B6JY72","InterPro:IPR012766","EnsemblGenomes-Gn:SJAG_01531","UniProtKB/TrEMBL:B6JY72","InterPro:IPR001830"],"deletion_viability":"unknown","disordered_region_coords":[[2,13]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tbc1","uniquename":"SJAG_01526"},{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"}],"genes_by_uniquename":{"SJAG_01531":null,"SPAC328.03":null,"YBR126C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.2000","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":271,"score":0.0,"start":16},{"end":471,"score":0.0,"start":272}],"model":"5v0tE01","name":"Glycogen Phosphorylase B;"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00982","interpro_id":"IPR001830","interpro_name":"Glycosyl transferase, family 20","interpro_type":"Family","locations":[{"end":486,"score":0.0,"start":24}],"model":"PF00982","name":"Glycosyltransferase family 20"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10788","interpro_id":"IPR001830","interpro_name":"Glycosyl transferase, family 20","interpro_type":"Family","locations":[{"end":496,"score":0.0,"start":21}],"model":"PTHR10788:SF106","name":"TREHALOSE-6-PHOSPHATE SYNTHASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53756","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":488,"score":0.0,"start":24}],"model":"0038341","name":"UDP-Glycosyltransferase/glycogen phosphorylase"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR02400","interpro_id":"IPR012766","interpro_name":"Alpha,alpha-trehalose-phosphate synthase","interpro_type":"Family","locations":[{"end":486,"score":0.0,"start":24}],"model":"TIGR02400","name":"alpha,alpha-trehalose-phosphate synthase (UDP-forming)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03788","interpro_id":"IPR001830","interpro_name":"Glycosyl transferase, family 20","interpro_type":"Family","locations":[{"end":486,"score":0.0,"start":24}],"model":"cd03788","name":"trehalose-6-phosphate synthase"}],"location":{"chromosome_name":"supercont5.3","end_pos":1829682,"start_pos":1828013,"strand":"reverse"},"low_complexity_region_coords":[[47,60]],"name":"tps1","ortholog_annotations":[{"gene_uniquename":"SJAG_01531","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC328.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01531","ortholog_taxonid":4932,"ortholog_uniquename":"YBR126C","reference_uniquename":"PMID:29761456"}],"product":"alpha,alpha-trehalose-phosphate synthase [UDP-forming]","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0030437","GO:0005829","GO:0016757","GO:0016788","GO:0005975"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003825":null,"GO:0004805":null,"GO:0005829":null,"GO:0005946":null,"GO:0005992":null,"GO:0030437":null,"GO:0070413":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01531.1"],"transcripts_by_uniquename":{"SJAG_01531.1":null},"uniprot_identifier":"B6JY72","uniquename":"SJAG_01531"}


id: SJAG_01532
data:
  {"coiled_coil_coords":[[121,141]],"cv_annotations":{"biological_process":[{"annotations":[77244],"is_not":false,"summary":null,"term":"GO:0006357"}],"cellular_component":[{"annotations":[77243],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[77242],"is_not":false,"summary":null,"term":"GO:0003700"},{"annotations":[77241],"is_not":false,"summary":null,"term":"GO:0000978"}]},"dbxrefs":["InterPro:IPR036388","InterPro:IPR027725","EnsemblGenomes-Tr:EEB06491","InterPro:IPR011006","GOA:B6JY73","EnsemblGenomes-Gn:SJAG_01532","InterPro:IPR000232","InterPro:IPR036390","UniProtKB/TrEMBL:B6JY73"],"deletion_viability":"unknown","disordered_region_coords":[[117,118],[187,214],[219,220],[223,227],[230,231],[236,237],[239,240],[250,251],[256,257],[263,270],[273,312],[314,317],[342,357],[410,412]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bsd1","uniquename":"SJAG_01527"},{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"}],"genes_by_uniquename":{"SJAG_01532":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.10","interpro_id":"IPR036388","interpro_name":"Winged helix-like DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":110,"score":2.8999999517622036e-35,"start":4}],"model":"5hdkC00","name":"Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.2300","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":540,"score":0.000012000000424450263,"start":424}],"model":"5uicB00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00447","interpro_id":"IPR000232","interpro_name":"Heat shock factor (HSF)-type, DNA-binding","interpro_type":"Domain","locations":[{"end":109,"score":4.700000221791067e-31,"start":10}],"model":"PF00447","name":"HSF-type DNA-binding"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00056","interpro_id":"IPR000232","interpro_name":"Heat shock factor (HSF)-type, DNA-binding","interpro_type":"Domain","locations":[{"end":33,"score":1.6999999498390483e-12,"start":10},{"end":60,"score":1.6999999498390483e-12,"start":48},{"end":73,"score":1.6999999498390483e-12,"start":61}],"model":"PR00056","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00434","interpro_id":"IPR000232","interpro_name":"Heat shock factor (HSF)-type, DNA-binding","interpro_type":"Domain","locations":[{"end":73,"score":0.0,"start":49}],"model":"PS00434","name":"HSF-type DNA-binding domain signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10015","interpro_id":"IPR027725","interpro_name":"Heat shock transcription factor family","interpro_type":"Family","locations":[{"end":256,"score":3.599999950014664e-35,"start":9}],"model":"PTHR10015:SF361","name":"HEAT SHOCK TRANSCRIPTION FACTOR"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00415","interpro_id":"IPR000232","interpro_name":"Heat shock factor (HSF)-type, DNA-binding","interpro_type":"Domain","locations":[{"end":109,"score":4.203895392974451e-45,"start":6}],"model":"SM00415","name":"heat shock factor"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46785","interpro_id":"IPR036390","interpro_name":"Winged helix DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":109,"score":7.480000162898186e-31,"start":7}],"model":"0038616","name":"\"Winged helix\" DNA-binding domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52172","interpro_id":"IPR011006","interpro_name":"CheY-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":533,"score":4.270000033557153e-7,"start":425}],"model":"0046299","name":"CheY-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":1832108,"start_pos":1830216,"strand":"forward"},"low_complexity_region_coords":[[142,142],[372,398]],"product":"Heat shock factor (HSF)-type, DNA-binding","references_by_uniquename":{"PMID:21873635":null},"subset_termids":["GO:0003700","GO:0006355","GO:0005634","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0003700":null,"GO:0005634":null,"GO:0006357":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01532.1"],"transcripts_by_uniquename":{"SJAG_01532.1":null},"uniprot_identifier":"B6JY73","uniquename":"SJAG_01532"}


id: SJAG_01533
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92103],"is_not":false,"summary":null,"term":"GO:0007127"},{"annotations":[76665],"is_not":false,"summary":null,"term":"GO:0032436"}],"cellular_component":[{"annotations":[92099],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92100],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[92101],"is_not":false,"summary":null,"term":"GO:0035861"},{"annotations":[76662],"is_not":false,"summary":null,"term":"GO:0000151"}],"molecular_function":[{"annotations":[76663],"is_not":false,"summary":null,"term":"GO:0031624"},{"annotations":[76667],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[92106],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR031127","GOA:B6JY74","InterPro:IPR001841","EnsemblGenomes-Gn:SJAG_01533","InterPro:IPR013083","UniProtKB/TrEMBL:B6JY74","InterPro:IPR018957","EnsemblGenomes-Tr:EEB06492","InterPro:IPR002867"],"deletion_viability":"unknown","disordered_region_coords":[[31,37],[43,44],[117,123]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubp2","uniquename":"SJAG_01528"},{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"}],"genes_by_uniquename":{"HGNC:689":null,"SJAG_01533":null,"SPAC328.02":null,"YKR017C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.120.1750","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":505,"score":0.0,"start":268}],"model":"5udhA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":219,"score":5.400000210170879e-16,"start":133}],"model":"1wimA00","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00097","interpro_id":"IPR018957","interpro_name":"Zinc finger, C3HC4 RING-type","interpro_type":"Domain","locations":[{"end":182,"score":0.000037000001611886546,"start":139}],"model":"PF00097","name":"Zinc finger, C3HC4 type (RING finger)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01485","interpro_id":"IPR002867","interpro_name":"IBR domain","interpro_type":"Domain","locations":[{"end":272,"score":2.3999999904100733e-11,"start":206},{"end":337,"score":1.3000000365082087e-7,"start":289}],"model":"PF01485","name":"IBR domain, a half RING-finger domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF19422","interpro_id":"IPR045840","interpro_name":"Ariadne domain","interpro_type":"Domain","locations":[{"end":483,"score":2.99999994735501e-14,"start":359}],"model":"PF19422","name":"Ariadne domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50089","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":185,"score":0.0,"start":139}],"model":"PS50089","name":"Zinc finger RING-type profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51873","interpro_id":"IPR044066","interpro_name":"TRIAD supradomain","interpro_type":"Domain","locations":[{"end":346,"score":0.0,"start":135}],"model":"PS51873","name":"TRIAD supradomain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11685","interpro_id":"IPR031127","interpro_name":"E3 ubiquitin ligase RBR family","interpro_type":"Family","locations":[{"end":429,"score":1.401298464324817e-45,"start":71}],"model":"PTHR11685:SF212","name":"RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00184","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":184,"score":0.0949999988079071,"start":139},{"end":275,"score":18.0,"start":236},{"end":422,"score":1.5,"start":299}],"model":"SM00184","name":"Ring finger"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00647","interpro_id":"IPR002867","interpro_name":"IBR domain","interpro_type":"Domain","locations":[{"end":272,"score":8.600000158251388e-16,"start":205},{"end":342,"score":3.499999942646603e-11,"start":280}],"model":"SM00647","name":"In Between Ring fingers"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":214,"score":3.3600001307729915e-14,"start":135},{"end":279,"score":3.229999947507167e-7,"start":205},{"end":347,"score":2.1199999327229078e-20,"start":291}],"model":"0050592","name":"RING/U-box"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd20346","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":281,"score":3.750779906658792e-23,"start":213}],"model":"cd20346","name":"BRcat domain found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd20356","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":346,"score":4.642709930913963e-35,"start":291}],"model":"cd20356","name":"Rcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1834373,"start_pos":1832683,"strand":"reverse"},"low_complexity_region_coords":[[9,28],[348,348]],"name":"dbl4","ortholog_annotations":[{"gene_uniquename":"SJAG_01533","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:689","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01533","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC328.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01533","ortholog_taxonid":4932,"ortholog_uniquename":"YKR017C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin-protein ligase E3 involved in sporulation Dbl4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0016746","GO:0005694","GO:0140096","GO:0019787","GO:0030163","GO:0140013","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000151":null,"GO:0005634":null,"GO:0005829":null,"GO:0007127":null,"GO:0008270":null,"GO:0031624":null,"GO:0032436":null,"GO:0035861":null,"GO:0061630":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01533.1"],"transcripts_by_uniquename":{"SJAG_01533.1":null},"uniprot_identifier":"B6JY74","uniquename":"SJAG_01533"}


id: SJAG_01534
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92093],"is_not":false,"summary":null,"term":"GO:0006611"},{"annotations":[75618],"is_not":false,"summary":null,"term":"GO:0006405"}],"cellular_component":[{"annotations":[92089],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92090],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[75617],"is_not":false,"summary":null,"term":"GO:0042565"}],"molecular_function":[{"annotations":[92095],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[92096],"is_not":false,"summary":null,"term":"GO:0005049"},{"annotations":[92097],"is_not":false,"summary":null,"term":"GO:0061608"},{"annotations":[75616],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY75","InterPro:IPR013598","GOA:B6JY75","InterPro:IPR011989","EnsemblGenomes-Gn:SJAG_01534","InterPro:IPR040018","EnsemblGenomes-Tr:EEB06493","InterPro:IPR016024"],"deletion_viability":"unknown","disordered_region_coords":[[968,969],[971,978]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hrb1","uniquename":"SJAG_01529"},{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"}],"genes_by_uniquename":{"HGNC:17675":null,"SJAG_01534":null,"SPAC328.01c":null,"YDR335W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":1160,"score":0.0,"start":2}],"model":"3a6pA00","name":"Leucine-rich Repeat Variant"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08389","interpro_id":"IPR013598","interpro_name":"Exportin-1/Importin-beta-like","interpro_type":"Domain","locations":[{"end":280,"score":9.100000213004694e-14,"start":115}],"model":"PF08389","name":"Exportin 1-like protein"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF19273","interpro_id":"IPR045478","interpro_name":"Exportin-5, C-terminal domain","interpro_type":"Domain","locations":[{"end":1179,"score":0.0,"start":331}],"model":"PF19273","name":"Exportin-5 family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11223","interpro_id":"IPR045065","interpro_name":"Exportin-1/5","interpro_type":"Family","locations":[{"end":1175,"score":0.0,"start":2}],"model":"PTHR11223:SF3","name":"EXPORTIN 1/5"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":1157,"score":1.2100000324015157e-32,"start":1}],"model":"0050417","name":"ARM repeat"}],"location":{"chromosome_name":"supercont5.3","end_pos":1838845,"start_pos":1835088,"strand":"forward"},"low_complexity_region_coords":[[318,329],[792,803],[929,949],[971,980],[1010,1026],[1111,1127]],"name":"msn5","ortholog_annotations":[{"gene_uniquename":"SJAG_01534","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17675","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01534","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC328.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01534","ortholog_taxonid":4932,"ortholog_uniquename":"YDR335W","reference_uniquename":"PMID:29761456"}],"product":"karyopherin/importin beta family nuclear import/export signal receptor","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0140104","GO:0006913","GO:0140142","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005049":null,"GO:0005525":null,"GO:0005635":null,"GO:0005829":null,"GO:0006405":null,"GO:0006611":null,"GO:0042565":null,"GO:0061608":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01534.1"],"transcripts_by_uniquename":{"SJAG_01534.1":null},"uniprot_identifier":"B6JY75","uniquename":"SJAG_01534"}


id: SJAG_01535
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[92288],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92289],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[92290],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[92291],"is_not":false,"summary":null,"term":"GO:0061630"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY76","InterPro:IPR036855","GOA:B6JY76","EnsemblGenomes-Tr:EEB06494","InterPro:IPR041367","EnsemblGenomes-Gn:SJAG_01535","InterPro:IPR000571"],"deletion_viability":"unknown","disordered_region_coords":[[103,105],[171,172],[179,185],[231,237],[240,267],[269,270],[273,296],[315,316],[319,320],[325,336],[339,363],[365,376],[423,428],[431,466],[468,472],[474,499],[112,158],[187,213]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spg4","uniquename":"SJAG_01530"},{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"}],"genes_by_uniquename":{"HGNC:7113":null,"SJAG_01535":null,"SPAC3A11.02":null,"YPL054W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:4.10.1000.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":103,"score":1.499999973677505e-14,"start":31}],"model":"2d9nA00","name":"Zinc finger, CCCH-type"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00642","interpro_id":"IPR000571","interpro_name":"Zinc finger, CCCH-type","interpro_type":"Domain","locations":[{"end":60,"score":0.00019999999494757503,"start":38}],"model":"PF00642","name":"Zinc finger C-x8-C-x5-C-x3-H type (and similar)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18044","interpro_id":"IPR041367","interpro_name":"E3 ligase, CCCH-type zinc finger","interpro_type":"Domain","locations":[{"end":88,"score":6.000000212225132e-6,"start":69}],"model":"PF18044","name":"CCCH-type zinc finger"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50103","interpro_id":"IPR000571","interpro_name":"Zinc finger, CCCH-type","interpro_type":"Domain","locations":[{"end":62,"score":0.0,"start":35},{"end":91,"score":0.0,"start":64}],"model":"PS50103","name":"Zinc finger C3H1-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11224","interpro_id":"IPR045072","interpro_name":"MKRN-like","interpro_type":"Family","locations":[{"end":347,"score":5.099999851078862e-18,"start":39}],"model":"PTHR11224:SF10","name":"MAKORIN-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00356","interpro_id":"IPR000571","interpro_name":"Zinc finger, CCCH-type","interpro_type":"Domain","locations":[{"end":61,"score":0.00005199999941396527,"start":35},{"end":90,"score":5.4000001910026185e-6,"start":65}],"model":"SM00356","name":"zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF90229","interpro_id":"IPR036855","interpro_name":"Zinc finger, CCCH-type superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":60,"score":1.030000021273736e-6,"start":38},{"end":88,"score":0.000049700000090524554,"start":64}],"model":"0052242","name":"CCCH zinc finger"}],"location":{"chromosome_name":"supercont5.3","end_pos":1841192,"start_pos":1839549,"strand":"forward"},"low_complexity_region_coords":[[159,170],[174,185],[214,230]],"name":"cps3","ortholog_annotations":[{"gene_uniquename":"SJAG_01535","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7113","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01535","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01535","ortholog_taxonid":4932,"ortholog_uniquename":"YPL054W","reference_uniquename":"PMID:29761456"}],"product":"zf-CCCH type zinc finger protein, unknown biological role Cps3, potential makorin ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016746","GO:0005829","GO:0140096","GO:0019787"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0046872":null,"GO:0061630":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01535.1"],"transcripts_by_uniquename":{"SJAG_01535.1":null},"uniprot_identifier":"B6JY76","uniquename":"SJAG_01535"}


id: SJAG_01536
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92293],"is_not":false,"summary":null,"term":"GO:0002182"}],"cellular_component":[{"annotations":[92292],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[92294],"is_not":false,"summary":null,"term":"GO:0016279"}]},"dbxrefs":["InterPro:IPR029063","InterPro:IPR019410","EnsemblGenomes-Tr:EEB06495","EnsemblGenomes-Gn:SJAG_01536","GOA:B6JY77","UniProtKB/TrEMBL:B6JY77"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tps1","uniquename":"SJAG_01531"},{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"}],"genes_by_uniquename":{"HGNC:26988":null,"SJAG_01536":null,"SPAC3A11.03":null,"YJR129C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.150","interpro_id":"IPR029063","interpro_name":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":277,"score":8.300002908073037e-40,"start":58}],"model":"4pwyA00","name":"Vaccinia Virus protein VP39"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10294","interpro_id":"IPR019410","interpro_name":"Lysine methyltransferase","interpro_type":"Family","locations":[{"end":261,"score":1.0999999650920748e-20,"start":121}],"model":"PF10294","name":"Lysine methyltransferase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14614","interpro_id":"IPR019410","interpro_name":"Lysine methyltransferase","interpro_type":"Family","locations":[{"end":260,"score":4.0000001089808046e-27,"start":99}],"model":"PTHR14614:SF130","name":"HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53335","interpro_id":"IPR029063","interpro_name":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":235,"score":7.59999981051676e-18,"start":114}],"model":"0050749","name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02440","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":189,"score":0.006735220085829496,"start":147}],"model":"cd02440","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":1842693,"start_pos":1841800,"strand":"reverse"},"name":"efm3","ortholog_annotations":[{"gene_uniquename":"SJAG_01536","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26988","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01536","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01536","ortholog_taxonid":4932,"ortholog_uniquename":"YJR129C","reference_uniquename":"PMID:29761456"}],"product":"translation elongation factor EF2 methyltransferase Efm3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0002181","GO:0140096","GO:0016741","GO:0008276"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002182":null,"GO:0005737":null,"GO:0016279":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01536.1"],"transcripts_by_uniquename":{"SJAG_01536.1":null},"uniprot_identifier":"B6JY77","uniquename":"SJAG_01536"}


id: SJAG_01537
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92296],"is_not":false,"summary":null,"term":"GO:0140042"}],"cellular_component":[{"annotations":[92295],"is_not":false,"summary":null,"term":"GO:0005783"}]},"dbxrefs":["GOA:B6JY78","EnsemblGenomes-Tr:EEB06496","EnsemblGenomes-Gn:SJAG_01537","InterPro:IPR009617","UniProtKB/TrEMBL:B6JY78"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01532"},{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"}],"genes_by_uniquename":{"HGNC:15832":null,"SJAG_01537":null,"SPAC3A11.04":null,"YLR404W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06775","interpro_id":"IPR009617","interpro_name":"Seipin family","interpro_type":"Family","locations":[{"end":217,"score":9.999999350456404e-39,"start":19}],"model":"PF06775","name":"Putative adipose-regulatory protein (Seipin)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21212","interpro_id":"IPR009617","interpro_name":"Seipin family","interpro_type":"Family","locations":[{"end":229,"score":1.6999999227869336e-17,"start":4}],"model":"PTHR21212:SF0","name":"BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":1843879,"start_pos":1843034,"strand":"forward"},"low_complexity_region_coords":[[18,32],[119,130]],"name":"sei1","ortholog_annotations":[{"gene_uniquename":"SJAG_01537","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15832","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01537","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01537","ortholog_taxonid":4932,"ortholog_uniquename":"YLR404W","reference_uniquename":"PMID:29761456"}],"product":"ER-associated lipid droplet biogenesis protein, seipin Sei1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0140042":null},"tm_domain_coords":[[13,35],[210,232]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01537.1"],"transcripts_by_uniquename":{"SJAG_01537.1":null},"uniprot_identifier":"B6JY78","uniquename":"SJAG_01537"}


id: SJAG_01538
data:
  {"coiled_coil_coords":[[173,214],[236,312],[316,350],[389,409],[436,463]],"cv_annotations":{"biological_process":[{"annotations":[92302],"is_not":false,"summary":null,"term":"GO:1990683"},{"annotations":[92303],"is_not":false,"summary":null,"term":"GO:0045141"}],"cellular_component":[{"annotations":[92297],"is_not":false,"summary":null,"term":"GO:0031021"},{"annotations":[92299],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[92300],"is_not":false,"summary":null,"term":"GO:0031965"},{"annotations":[92301],"is_not":false,"summary":null,"term":"GO:1990612"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06497","EnsemblGenomes-Gn:SJAG_01538","UniProtKB/TrEMBL:B6JY79","GOA:B6JY79"],"deletion_viability":"unknown","disordered_region_coords":[[41,43],[86,91],[97,100],[121,172],[189,198],[200,210],[215,217],[219,224],[230,231],[233,235],[248,256],[285,287],[292,294],[296,297],[351,373],[375,376],[380,383],[410,415],[418,420],[448,449],[464,465],[499,502],[504,506],[513,515],[102,107]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dbl4","uniquename":"SJAG_01533"},{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"}],"genes_by_uniquename":{"HGNC:26703":null,"SJAG_01538":null,"SPAC3A11.05c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1845758,"start_pos":1843887,"strand":"reverse"},"low_complexity_region_coords":[[108,120],[236,252],[453,463],[503,515],[555,569]],"name":"kms1","ortholog_annotations":[{"gene_uniquename":"SJAG_01538","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26703","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01538","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.05c","reference_uniquename":"PMID:21511999"}],"product":"meiotic spindle pole body KASH domain protein Kms1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005816","GO:0015630","GO:0005634","GO:0140013"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0031021":null,"GO:0031965":null,"GO:0044732":null,"GO:0045141":null,"GO:1990612":null,"GO:1990683":null},"tm_domain_coords":[[552,569]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01538.1"],"transcripts_by_uniquename":{"SJAG_01538.1":null},"uniprot_identifier":"B6JY79","uniquename":"SJAG_01538"}


id: SJAG_01539
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92306],"is_not":false,"summary":null,"term":"GO:0006116"},{"annotations":[92307],"is_not":false,"summary":null,"term":"GO:0006119"}],"cellular_component":[{"annotations":[92304],"is_not":false,"summary":null,"term":"GO:0031966"}],"molecular_function":[{"annotations":[92308],"is_not":false,"summary":null,"term":"GO:0050136"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01539","UniProtKB/TrEMBL:B6JY80","InterPro:IPR036188","EnsemblGenomes-Tr:EEB06498","InterPro:IPR023753","GOA:B6JY80"],"deletion_viability":"unknown","disordered_region_coords":[[79,81],[336,347],[373,376]],"feature_publications":[{"reference_uniquename":"PMID:37164017","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"msn5","uniquename":"SJAG_01534"},{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"}],"genes_by_uniquename":{"SJAG_01539":null,"SPAC3A11.07":null,"YDL085W":null,"YMR145C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.50.50.100","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":498,"score":0.0,"start":81}],"model":"4g6hA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07992","interpro_id":"IPR023753","interpro_name":"FAD/NAD(P)-binding domain","interpro_type":"Domain","locations":[{"end":424,"score":0.0,"start":91}],"model":"PF07992","name":"Pyridine nucleotide-disulphide oxidoreductase"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00368","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":111,"score":3.199999980552093e-7,"start":92},{"end":212,"score":3.199999980552093e-7,"start":194},{"end":273,"score":3.199999980552093e-7,"start":255},{"end":409,"score":3.199999980552093e-7,"start":387}],"model":"PR00368","name":"FAD-dependent pyridine nucleotide reductase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43706","interpro_id":"IPR045024","interpro_name":"Alternative NADH dehydrogenase","interpro_type":"Family","locations":[{"end":498,"score":0.0,"start":81}],"model":"PTHR43706:SF42","name":"NADH DEHYDROGENASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51905","interpro_id":"IPR036188","interpro_name":"FAD/NAD(P)-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":432,"score":1.1200000218864591e-23,"start":80}],"model":"0037441","name":"FAD/NAD(P)-binding domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":1847863,"start_pos":1846210,"strand":"reverse"},"low_complexity_region_coords":[[409,423]],"name":"nde1","ortholog_annotations":[{"gene_uniquename":"SJAG_01539","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01539","ortholog_taxonid":4932,"ortholog_uniquename":"YDL085W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01539","ortholog_taxonid":4932,"ortholog_uniquename":"YMR145C","reference_uniquename":"PMID:29761456"}],"product":"external mitochondrial NADH dehydrogenase (ubiquinone) Nde1/Nde2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:37164017":null},"subset_termids":["GO:0055086","GO:0005739","GO:0006091","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006116":null,"GO:0006119":null,"GO:0031966":null,"GO:0050136":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01539.1"],"transcripts_by_uniquename":{"SJAG_01539.1":null},"uniprot_identifier":"B6JY80","uniquename":"SJAG_01539"}


id: SJAG_01540
data:
  {"coiled_coil_coords":[[637,657]],"cv_annotations":{"biological_process":[{"annotations":[92314],"is_not":false,"summary":null,"term":"GO:0033621"},{"annotations":[92315],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[92316],"is_not":false,"summary":null,"term":"GO:0008104"},{"annotations":[92317],"is_not":false,"summary":null,"term":"GO:0031048"},{"annotations":[92318],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[92319],"is_not":false,"summary":null,"term":"GO:0031509"},{"annotations":[92320],"is_not":false,"summary":null,"term":"GO:0006283"},{"annotations":[92321],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[65699],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[92309],"is_not":false,"summary":null,"term":"GO:0043494"},{"annotations":[92311],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92313],"is_not":false,"summary":null,"term":"GO:0005721"}],"molecular_function":[{"annotations":[65697],"is_not":false,"summary":null,"term":"GO:0031625"}]},"dbxrefs":["InterPro:IPR016159","InterPro:IPR019559","UniProtKB/TrEMBL:B6JY81","InterPro:IPR036317","InterPro:IPR016157","EnsemblGenomes-Gn:SJAG_01540","GOA:B6JY81","InterPro:IPR001373","InterPro:IPR016158","InterPro:IPR036388","EnsemblGenomes-Tr:EEB06499","InterPro:IPR036390"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cps3","uniquename":"SJAG_01535"},{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"}],"genes_by_uniquename":{"HGNC:2554":null,"HGNC:2555":null,"SJAG_01540":null,"SPAC3A11.08":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.10","interpro_id":"IPR036388","interpro_name":"Winged helix-like DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":729,"score":1.3000000155431645e-23,"start":644}],"model":"3o2pE00","name":"Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1310.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":149,"score":1.5000000170217692e-18,"start":19},{"end":266,"score":5.999999759184749e-13,"start":151},{"end":367,"score":4.900000218945044e-13,"start":269},{"end":482,"score":7.200000204951874e-37,"start":372}],"model":"4a64A01","name":"Cullin Repeats"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.230.130","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":643,"score":0.0,"start":486}],"model":"4f52C02","name":"Cullin; Chain C, Domain 2"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00888","interpro_id":"IPR001373","interpro_name":"Cullin, N-terminal","interpro_type":"Domain","locations":[{"end":630,"score":0.0,"start":31}],"model":"PF00888","name":"Cullin family"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10557","interpro_id":"IPR019559","interpro_name":"Cullin protein, neddylation domain","interpro_type":"Domain","locations":[{"end":722,"score":6.300000203969575e-22,"start":661}],"model":"PF10557","name":"Cullin protein neddylation domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01256","interpro_id":"IPR016157","interpro_name":"Cullin, conserved site","interpro_type":"Conserved_site","locations":[{"end":729,"score":0.0,"start":704}],"model":"PS01256","name":"Cullin family signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50069","interpro_id":"IPR016158","interpro_name":"Cullin homology domain","interpro_type":"Domain","locations":[{"end":602,"score":0.0,"start":374}],"model":"PS50069","name":"Cullin family profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11932","interpro_id":"IPR045093","interpro_name":"Cullin","interpro_type":"Family","locations":[{"end":728,"score":0.0,"start":27}],"model":"PTHR11932:SF123","name":"CULLIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00182","interpro_id":"IPR016158","interpro_name":"Cullin homology domain","interpro_type":"Domain","locations":[{"end":550,"score":0.0,"start":404}],"model":"SM00182","name":"Cullin"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00884","interpro_id":"IPR019559","interpro_name":"Cullin protein, neddylation domain","interpro_type":"Domain","locations":[{"end":725,"score":1.2999999391222643e-26,"start":658}],"model":"SM00884","name":"Cullin protein neddylation domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46785","interpro_id":"IPR036390","interpro_name":"Winged helix DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":727,"score":3.3500000956378922e-21,"start":641}],"model":"0047445","name":"\"Winged helix\" DNA-binding domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF74788","interpro_id":"IPR016159","interpro_name":"Cullin repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":364,"score":0.0,"start":23}],"model":"0054070","name":"Cullin repeat-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF75632","interpro_id":"IPR036317","interpro_name":"Cullin homology domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":644,"score":0.0,"start":374}],"model":"0054071","name":"Cullin homology domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":1850630,"start_pos":1848441,"strand":"reverse"},"low_complexity_region_coords":[[247,259],[465,483]],"name":"cul4","ortholog_annotations":[{"gene_uniquename":"SJAG_01540","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2554","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01540","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2555","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01540","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.08","reference_uniquename":"PMID:21511999"}],"product":"cullin 4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0032200","GO:0005634","GO:0006325","GO:0005694","GO:0030163","GO:0005829","GO:0006281","GO:0016071","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005721":null,"GO:0005829":null,"GO:0006283":null,"GO:0006511":null,"GO:0008104":null,"GO:0030466":null,"GO:0031048":null,"GO:0031508":null,"GO:0031509":null,"GO:0031625":null,"GO:0033621":null,"GO:0043494":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01540.1"],"transcripts_by_uniquename":{"SJAG_01540.1":null},"uniprot_identifier":"B6JY81","uniquename":"SJAG_01540"}


id: SJAG_01541
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77042],"is_not":false,"summary":null,"term":"GO:0030007"},{"annotations":[92324],"is_not":false,"summary":null,"term":"GO:0120029"},{"annotations":[92325],"is_not":false,"summary":null,"term":"GO:0042391"},{"annotations":[92326],"is_not":false,"summary":null,"term":"GO:0036376"}],"cellular_component":[{"annotations":[77043],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[77041],"is_not":false,"summary":null,"term":"GO:0015385"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JY82","InterPro:IPR006153","EnsemblGenomes-Gn:SJAG_01541","GOA:B6JY82","EnsemblGenomes-Tr:EEB06500","InterPro:IPR038770","InterPro:IPR004712"],"deletion_viability":"unknown","disordered_region_coords":[[466,576],[705,749],[612,675]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"efm3","uniquename":"SJAG_01536"},{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"}],"genes_by_uniquename":{"SJAG_01541":null,"SPAC3A11.09":null,"YLR138W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1530.20","interpro_id":"IPR038770","interpro_name":"Sodium/solute symporter superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":387,"score":1.8999999857164144e-16,"start":21}],"model":"5bz3A00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00999","interpro_id":"IPR006153","interpro_name":"Cation/H+ exchanger","interpro_type":"Domain","locations":[{"end":433,"score":0.0,"start":17}],"model":"PF00999","name":"Sodium/hydrogen exchanger family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR31382","interpro_id":"IPR004712","interpro_name":"Na+/H+ antiporter, fungi","interpro_type":"Family","locations":[{"end":693,"score":0.0,"start":1}],"model":"PTHR31382:SF4","name":"NA(+)/H(+) ANTIPORTER"}],"location":{"chromosome_name":"supercont5.3","end_pos":1853611,"start_pos":1851188,"strand":"forward"},"low_complexity_region_coords":[[243,254],[577,595],[676,704]],"name":"sod22","ortholog_annotations":[{"gene_uniquename":"SJAG_01541","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01541","ortholog_taxonid":4932,"ortholog_uniquename":"YLR138W","reference_uniquename":"PMID:29761456"}],"product":"plasma membrane sodium ion/proton antiporter Sod22","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005886","GO:0055085","GO:0098771","GO:0022857"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005886":null,"GO:0015385":null,"GO:0030007":null,"GO:0036376":null,"GO:0042391":null,"GO:0120029":null},"tm_domain_coords":[[13,32],[37,59],[74,96],[103,125],[203,225],[245,264],[292,314],[326,348],[363,380],[413,435]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01541.1"],"transcripts_by_uniquename":{"SJAG_01541.1":null},"uniprot_identifier":"B6JY82","uniquename":"SJAG_01541"}


id: SJAG_01542
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[92328],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[60499],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[92329],"is_not":false,"summary":null,"term":"GO:0070573"}]},"dbxrefs":["InterPro:IPR008257","InterPro:IPR032466","UniProtKB/TrEMBL:B6JY83","EnsemblGenomes-Tr:EEB06501","GOA:B6JY83","EnsemblGenomes-Gn:SJAG_01542"],"deletion_viability":"unknown","disordered_region_coords":[[2,10],[12,13],[238,241]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sei1","uniquename":"SJAG_01537"},{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"}],"genes_by_uniquename":{"HGNC:23028":null,"HGNC:23029":null,"HGNC:3002":null,"SJAG_01542":null,"SPAC3A11.10c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.20.140","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":418,"score":0.0,"start":59}],"model":"5nryA00","name":"Metal-dependent hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01244","interpro_id":"IPR008257","interpro_name":"Peptidase M19","interpro_type":"Family","locations":[{"end":398,"score":0.0,"start":68}],"model":"PF01244","name":"Membrane dipeptidase (Peptidase family M19)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51365","interpro_id":"IPR008257","interpro_name":"Peptidase M19","interpro_type":"Family","locations":[{"end":424,"score":0.0,"start":56}],"model":"PS51365","name":"Renal dipeptidase family profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10443","interpro_id":"IPR008257","interpro_name":"Peptidase M19","interpro_type":"Family","locations":[{"end":405,"score":0.0,"start":25}],"model":"PTHR10443:SF44","name":"MICROSOMAL DIPEPTIDASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51556","interpro_id":"IPR032466","interpro_name":"Metal-dependent hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":402,"score":0.0,"start":68}],"model":"0047434","name":"Metallo-dependent hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01301","interpro_id":"IPR008257","interpro_name":"Peptidase M19","interpro_type":"Family","locations":[{"end":396,"score":0.0,"start":70}],"model":"cd01301","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":1855411,"start_pos":1854137,"strand":"reverse"},"name":"dpe1","ortholog_annotations":[{"gene_uniquename":"SJAG_01542","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23028","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01542","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23029","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01542","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3002","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01542","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.10c","reference_uniquename":"PMID:21511999"}],"product":"dipeptidyl peptidase, unknown specificity, implicated in glutathione metabolism","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005794","GO:0008233","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0046872":null,"GO:0070573":null},"tm_domain_coords":[[26,43]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01542.1"],"transcripts_by_uniquename":{"SJAG_01542.1":null},"uniprot_identifier":"B6JY83","uniquename":"SJAG_01542"}


id: SJAG_01543
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109625],"is_not":false,"summary":null,"term":"GO:0042821"},{"annotations":[96376],"is_not":false,"summary":null,"term":"GO:0042820"}],"cellular_component":[{"annotations":[96373],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109624],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109626],"is_not":false,"summary":null,"term":"GO:0050236"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01543","EnsemblGenomes-Tr:EEB06502","InterPro:IPR023210","InterPro:IPR036812","UniProtKB/TrEMBL:B6JY84"],"deletion_viability":"unknown","disordered_region_coords":[[223,225],[228,230],[316,316],[318,319]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"kms1","uniquename":"SJAG_01538"},{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"}],"genes_by_uniquename":{"HGNC:24056":null,"HGNC:389":null,"HGNC:390":null,"SJAG_01543":null,"SPAC3A11.11c":null,"SPAC9E9.11":null,"SPCC1281.04":null,"YPR127W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.20.100","interpro_id":"IPR036812","interpro_name":"NADP-dependent oxidoreductase domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":333,"score":0.0,"start":2}],"model":"3v0sA00","name":"NADP-dependent oxidoreductase domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00248","interpro_id":"IPR023210","interpro_name":"NADP-dependent oxidoreductase domain","interpro_type":"Domain","locations":[{"end":312,"score":0.0,"start":15}],"model":"PF00248","name":"Aldo/keto reductase family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43625","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":324,"score":0.0,"start":7}],"model":"PTHR43625:SF78","name":"AFLATOXIN B1 ALDEHYDE REDUCTASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51430","interpro_id":"IPR036812","interpro_name":"NADP-dependent oxidoreductase domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":318,"score":0.0,"start":7}],"model":"0046647","name":"NAD(P)-linked oxidoreductase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd19077","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":311,"score":0.0,"start":7}],"model":"cd19077","name":"AKR8A family of aldo-keto reductase (AKR)"}],"location":{"chromosome_name":"supercont5.3","end_pos":1856821,"start_pos":1855817,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01543","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24056","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01543","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:389","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01543","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:390","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01543","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.11c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01543","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01543","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1281.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01543","ortholog_taxonid":4932,"ortholog_uniquename":"YPR127W","reference_uniquename":"PMID:29761456"}],"product":"NADP-dependent oxidoreductase domain","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0006766","GO:0005829","GO:0005634","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0042820":null,"GO:0042821":null,"GO:0050236":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01543.1"],"transcripts_by_uniquename":{"SJAG_01543.1":null},"uniprot_identifier":"B6JY84","uniquename":"SJAG_01543"}


id: SJAG_01544
data:
  {"coiled_coil_coords":[[44,78]],"cv_annotations":{"biological_process":[{"annotations":[67336],"is_not":false,"summary":null,"term":"GO:1901800"},{"annotations":[92335],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[92333],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92334],"is_not":false,"summary":null,"term":"GO:0008540"}],"molecular_function":[{"annotations":[92336],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[92337],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[92338],"is_not":false,"summary":null,"term":"GO:0036402"}]},"dbxrefs":["InterPro:IPR005937","GOA:B6JY85","InterPro:IPR032501","UniProtKB/TrEMBL:B6JY85","EnsemblGenomes-Gn:SJAG_01544","InterPro:IPR027417","EnsemblGenomes-Tr:EEB06503","InterPro:IPR041569","InterPro:IPR003960","InterPro:IPR003593","InterPro:IPR003959"],"deletion_viability":"unknown","disordered_region_coords":[[1,41],[44,46],[57,60],[63,76],[99,122],[171,176]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nde1","uniquename":"SJAG_01539"},{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"}],"genes_by_uniquename":{"HGNC:9549":null,"SJAG_01544":null,"SPAC3A11.12c":null,"YOR117W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":428,"score":1.3000000155431645e-23,"start":357}],"model":"3whkA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.140","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":174,"score":1.0999999780167719e-18,"start":21}],"model":"2wg6D00","name":"Nucleic acid-binding proteins"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":356,"score":0.0,"start":175}],"model":"3h4mA01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00004","interpro_id":"IPR003959","interpro_name":"ATPase, AAA-type, core","interpro_type":"Domain","locations":[{"end":356,"score":8.499996224901475e-41,"start":224}],"model":"PF00004","name":"ATPase family associated with various cellular activities (AAA)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16450","interpro_id":"IPR032501","interpro_name":"Proteasomal ATPase OB C-terminal domain","interpro_type":"Domain","locations":[{"end":165,"score":1.0999999722265076e-15,"start":89}],"model":"PF16450","name":"Proteasomal ATPase OB C-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF17862","interpro_id":"IPR041569","interpro_name":"AAA ATPase, AAA+ lid domain","interpro_type":"Domain","locations":[{"end":422,"score":9.999999960041972e-12,"start":378}],"model":"PF17862","name":"AAA+ lid domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00674","interpro_id":"IPR003960","interpro_name":"ATPase, AAA-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":344,"score":0.0,"start":326}],"model":"PS00674","name":"AAA-protein family signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23073","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":432,"score":0.0,"start":31}],"model":"PTHR23073:SF7","name":"26S PROTEASOME REGULATORY SUBUNIT"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00382","interpro_id":"IPR003593","interpro_name":"AAA+ ATPase domain","interpro_type":"Domain","locations":[{"end":358,"score":6.300000203969575e-22,"start":219}],"model":"SM00382","name":"ATPases associated with a variety of cellular activities"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":430,"score":0.0,"start":183}],"model":"0042094","name":"P-loop containing nucleoside triphosphate hydrolases"}],"location":{"chromosome_name":"supercont5.3","end_pos":1858894,"start_pos":1857429,"strand":"reverse"},"name":"rpt5","ortholog_annotations":[{"gene_uniquename":"SJAG_01544","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9549","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01544","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01544","ortholog_taxonid":4932,"ortholog_uniquename":"YOR117W","reference_uniquename":"PMID:29761456"}],"product":"19S proteasome base subcomplex ATPase subunit Rpt5","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0030163","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005829":null,"GO:0008540":null,"GO:0016887":null,"GO:0036402":null,"GO:0043161":null,"GO:1901800":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01544.1"],"transcripts_by_uniquename":{"SJAG_01544.1":null},"uniprot_identifier":"B6JY85","uniquename":"SJAG_01544"}


id: SJAG_01545
data:
  {"coiled_coil_coords":[[1,1],[58,78]],"cv_annotations":{"biological_process":[{"annotations":[75612],"is_not":false,"summary":null,"term":"GO:0051131"},{"annotations":[75614],"is_not":false,"summary":null,"term":"GO:0006457"},{"annotations":[92344],"is_not":false,"summary":null,"term":"GO:0007021"}],"cellular_component":[{"annotations":[92339],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92340],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[75611],"is_not":false,"summary":null,"term":"GO:0016272"}],"molecular_function":[{"annotations":[75615],"is_not":false,"summary":null,"term":"GO:0051087"},{"annotations":[64971],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["InterPro:IPR002777","EnsemblGenomes-Gn:SJAG_01545","InterPro:IPR009053","EnsemblGenomes-Tr:EEB06504","UniProtKB/TrEMBL:B6JY86","GOA:B6JY86"],"deletion_viability":"unknown","disordered_region_coords":[[108,112]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cul4","uniquename":"SJAG_01540"},{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"}],"genes_by_uniquename":{"HGNC:4926":null,"SJAG_01545":null,"SPAC3A11.13":null,"YLR200W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.370","interpro_id":"IPR009053","interpro_name":"Prefoldin","interpro_type":"Homologous_superfamily","locations":[{"end":109,"score":2.1999999829022448e-27,"start":1}],"model":"2zqmA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01920","interpro_id":"IPR002777","interpro_name":"Prefoldin beta-like","interpro_type":"Family","locations":[{"end":106,"score":7.499999761991419e-22,"start":3}],"model":"PF01920","name":"Prefoldin subunit"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21431","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":109,"score":1.2000000038052922e-29,"start":4}],"model":"PTHR21431:SF0","name":"PREFOLDIN SUBUNIT 6"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46579","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":102,"score":1.7000000470255842e-22,"start":2}],"model":"0046875","name":"Prefoldin"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00632","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":104,"score":1.6758200479544826e-18,"start":1}],"model":"cd00632","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":1859948,"start_pos":1859306,"strand":"forward"},"name":"pfd6","ortholog_annotations":[{"gene_uniquename":"SJAG_01545","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4926","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01545","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01545","ortholog_taxonid":4932,"ortholog_uniquename":"YLR200W","reference_uniquename":"PMID:29761456"}],"product":"prefoldin subunit Pfd6","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0065003","GO:0006457","GO:0051604","GO:0051082","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006457":null,"GO:0007021":null,"GO:0016272":null,"GO:0051082":null,"GO:0051087":null,"GO:0051131":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01545.1"],"transcripts_by_uniquename":{"SJAG_01545.1":null},"uniprot_identifier":"B6JY86","uniquename":"SJAG_01545"}


id: SJAG_01546
data:
  {"coiled_coil_coords":[[116,143],[148,168],[246,273],[278,298],[334,354]],"cv_annotations":{"biological_process":[{"annotations":[92354],"is_not":false,"summary":null,"term":"GO:0090306"},{"annotations":[92355],"is_not":false,"summary":null,"term":"GO:1990810"},{"annotations":[92356],"is_not":false,"summary":null,"term":"GO:0001578"},{"annotations":[92361],"is_not":false,"summary":null,"term":"GO:1990976"}],"cellular_component":[{"annotations":[92345],"is_not":false,"summary":null,"term":"GO:0005871"},{"annotations":[92346],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[92347],"is_not":false,"summary":null,"term":"GO:0090619"},{"annotations":[92348],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[92349],"is_not":false,"summary":null,"term":"GO:0005874"},{"annotations":[92350],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[92351],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[92352],"is_not":false,"summary":null,"term":"GO:1990811"},{"annotations":[92353],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[92362],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[92363],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[68589],"is_not":false,"summary":null,"term":"GO:0008017"},{"annotations":[92365],"is_not":false,"summary":null,"term":"GO:0008569"}]},"dbxrefs":["GOA:B6JY87","InterPro:IPR019821","EnsemblGenomes-Gn:SJAG_01546","InterPro:IPR027640","InterPro:IPR027417","UniProtKB/TrEMBL:B6JY87","InterPro:IPR036961","EnsemblGenomes-Tr:EEB06505","InterPro:IPR001752"],"deletion_viability":"unknown","disordered_region_coords":[[1,11],[42,43],[47,48],[52,54],[56,57],[61,62],[71,73],[78,80],[103,104],[319,325],[338,339],[350,354],[418,419],[479,485],[535,546],[552,553],[571,572],[576,585],[631,633],[662,664]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sod22","uniquename":"SJAG_01541"},{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"}],"genes_by_uniquename":{"HGNC:6389":null,"SJAG_01546":null,"SPAC3A11.14c":null,"YPR141C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.1490","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":194,"score":0.00001700000029813964,"start":69}],"model":"3na7A00","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.850.10","interpro_id":"IPR036961","interpro_name":"Kinesin motor domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":718,"score":0.0,"start":316}],"model":"3u06B00","name":"Kinesin motor domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00225","interpro_id":"IPR001752","interpro_name":"Kinesin motor domain","interpro_type":"Domain","locations":[{"end":716,"score":0.0,"start":381}],"model":"PF00225","name":"Kinesin motor domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00380","interpro_id":"IPR001752","interpro_name":"Kinesin motor domain","interpro_type":"Domain","locations":[{"end":484,"score":7.900000019353976e-38,"start":463},{"end":599,"score":7.900000019353976e-38,"start":582},{"end":631,"score":7.900000019353976e-38,"start":613},{"end":688,"score":7.900000019353976e-38,"start":667}],"model":"PR00380","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00411","interpro_id":"IPR019821","interpro_name":"Kinesin motor domain, conserved site","interpro_type":"Conserved_site","locations":[{"end":623,"score":0.0,"start":612}],"model":"PS00411","name":"Kinesin motor domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50067","interpro_id":"IPR001752","interpro_name":"Kinesin motor domain","interpro_type":"Domain","locations":[{"end":717,"score":0.0,"start":375}],"model":"PS50067","name":"Kinesin motor domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47972","interpro_id":"IPR027640","interpro_name":"Kinesin-like protein","interpro_type":"Family","locations":[{"end":728,"score":0.0,"start":121}],"model":"PTHR47972:SF45","name":"KINESIN-LIKE PROTEIN KLP-3"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00129","interpro_id":"IPR001752","interpro_name":"Kinesin motor domain","interpro_type":"Domain","locations":[{"end":725,"score":0.0,"start":373}],"model":"SM00129","name":"Kinesin motor, catalytic domain. ATPase."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":715,"score":0.0,"start":334}],"model":"0045383","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01366","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":719,"score":0.0,"start":373}],"model":"cd01366","name":"Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins"}],"location":{"chromosome_name":"supercont5.3","end_pos":1862331,"start_pos":1859969,"strand":"reverse"},"low_complexity_region_coords":[[12,24],[65,73]],"name":"pkl1","ortholog_annotations":[{"gene_uniquename":"SJAG_01546","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6389","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01546","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A11.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01546","ortholog_taxonid":4932,"ortholog_uniquename":"YPR141C","reference_uniquename":"PMID:29761456"}],"product":"kinesin-14 family minus-end directed microtubule motor Pkl1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0015630","GO:0140013","GO:0016887","GO:0072686","GO:0008017","GO:0000226","GO:0000776","GO:0005634","GO:0005816","GO:0003774","GO:0000070","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000776":null,"GO:0001578":null,"GO:0005524":null,"GO:0005634":null,"GO:0005871":null,"GO:0005874":null,"GO:0008017":null,"GO:0008569":null,"GO:0016887":null,"GO:0035974":null,"GO:0044732":null,"GO:0072686":null,"GO:0090306":null,"GO:0090619":null,"GO:1990810":null,"GO:1990811":null,"GO:1990976":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01546.1"],"transcripts_by_uniquename":{"SJAG_01546.1":null},"uniprot_identifier":"B6JY87","uniquename":"SJAG_01546"}


id: SJAG_01547
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92977],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[72500],"is_not":false,"summary":null,"term":"GO:0000244"}],"cellular_component":[{"annotations":[92973],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92975],"is_not":false,"summary":null,"term":"GO:0005681"},{"annotations":[92976],"is_not":false,"summary":null,"term":"GO:0005682"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06506","UniProtKB/TrEMBL:B6JY88","InterPro:IPR033648","InterPro:IPR007946","EnsemblGenomes-Gn:SJAG_01547","InterPro:IPR033647","InterPro:IPR038514"],"deletion_viability":"unknown","disordered_region_coords":[[89,91],[93,99],[329,370],[317,317]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dpe1","uniquename":"SJAG_01542"},{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"}],"genes_by_uniquename":{"HGNC:15886":null,"SJAG_01547":null,"SPAC3H5.04":null,"YBL074C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.550","interpro_id":"IPR038514","interpro_name":"AAR2, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":355,"score":7.699999982836464e-23,"start":153}],"model":"4ilgA02","name":"Aar2, C-terminal domain-like"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.34.20","interpro_id":"IPR038516","interpro_name":"AAR2, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":145,"score":3.000000026176508e-9,"start":1}],"model":"3sbtB01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05282","interpro_id":"IPR007946","interpro_name":"A1 cistron-splicing factor, AAR2","interpro_type":"Family","locations":[{"end":311,"score":4.8999999601677907e-26,"start":7}],"model":"PF05282","name":"AAR2 protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12689","interpro_id":"IPR007946","interpro_name":"A1 cistron-splicing factor, AAR2","interpro_type":"Family","locations":[{"end":310,"score":1.1999999642058263e-34,"start":174}],"model":"PTHR12689:SF4","name":"A1 CISTRON SPLICING FACTOR AAR2-RELATED"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd13777","interpro_id":"IPR033647","interpro_name":"AAR2, N-terminal","interpro_type":"Domain","locations":[{"end":126,"score":2.0904199273414368e-15,"start":1}],"model":"cd13777","name":"N-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd13778","interpro_id":"IPR033648","interpro_name":"AAR2, C-terminal","interpro_type":"Domain","locations":[{"end":307,"score":2.2632099305308196e-29,"start":165}],"model":"cd13778","name":"C-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor"}],"location":{"chromosome_name":"supercont5.3","end_pos":1863946,"start_pos":1862692,"strand":"forward"},"low_complexity_region_coords":[[318,328]],"name":"aar2","ortholog_annotations":[{"gene_uniquename":"SJAG_01547","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15886","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01547","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H5.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01547","ortholog_taxonid":4932,"ortholog_uniquename":"YBL074C","reference_uniquename":"PMID:29761456"}],"product":"U5 snRNP-associated protein Aar2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0016071","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000244":null,"GO:0005681":null,"GO:0005682":null,"GO:0005829":null,"GO:0045292":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01547.1"],"transcripts_by_uniquename":{"SJAG_01547.1":null},"uniprot_identifier":"B6JY88","uniquename":"SJAG_01547"}


id: SJAG_01548
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101086],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[70322],"is_not":false,"summary":null,"term":"GO:0000028"}],"cellular_component":[{"annotations":[101078],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[70320],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[101082],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[70319],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06507","InterPro:IPR036967","EnsemblGenomes-Gn:SJAG_01548","InterPro:IPR001971","InterPro:IPR018102","GOA:B6JY89","UniProtKB/TrEMBL:B6JY89"],"deletion_viability":"unknown","disordered_region_coords":[[45,49],[87,102],[139,139],[136,135]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01543"},{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"},{"uniquename":"SJAG_06627"}],"genes_by_uniquename":{"HGNC:10387":null,"SJAG_01548":null,"SPAC3H5.05c":null,"SPBC18H10.13":null,"YCR031C":null,"YJL191W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.420.80","interpro_id":"IPR036967","interpro_name":"Ribosomal protein S11 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":139,"score":0.0,"start":1}],"model":"2xzmK00","name":"Ribosomal protein S11"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_01310","interpro_id":"IPR001971","interpro_name":"Ribosomal protein S11","interpro_type":"Family","locations":[{"end":136,"score":0.0,"start":10}],"model":"MF_01310","name":"30S ribosomal protein S11 [rpsK]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00411","interpro_id":"IPR001971","interpro_name":"Ribosomal protein S11","interpro_type":"Family","locations":[{"end":135,"score":0.0,"start":17}],"model":"PF00411","name":"Ribosomal protein S11"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF002131","interpro_id":"IPR001971","interpro_name":"Ribosomal protein S11","interpro_type":"Family","locations":[{"end":136,"score":1.1999999893170948e-36,"start":3}],"model":"PIRSF002131","name":"Ribosomal protein, S11p/S11a/S14e/organellar S11 types"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00054","interpro_id":"IPR018102","interpro_name":"Ribosomal S11, conserved site","interpro_type":"Conserved_site","locations":[{"end":126,"score":0.0,"start":104}],"model":"PS00054","name":"Ribosomal protein S11 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11759","interpro_id":"IPR001971","interpro_name":"Ribosomal protein S11","interpro_type":"Family","locations":[{"end":134,"score":0.0,"start":6}],"model":"PTHR11759:SF1","name":"40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53137","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":137,"score":1.8299999455932513e-37,"start":12}],"model":"0046799","name":"Translational machinery components"}],"location":{"chromosome_name":"supercont5.3","end_pos":1864590,"start_pos":1864171,"strand":"reverse"},"low_complexity_region_coords":[[87,103],[96,117],[136,138]],"name":"rps14a","ortholog_annotations":[{"gene_uniquename":"SJAG_01548","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10387","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01548","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H5.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01548","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.13","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01548","ortholog_taxonid":4932,"ortholog_uniquename":"YCR031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01548","ortholog_taxonid":4932,"ortholog_uniquename":"YJL191W","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S14","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0022626","GO:0005634","GO:0005730","GO:0010494","GO:0005198","GO:0042254","GO:0065003","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000028":null,"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0010494":null,"GO:0022627":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01548.1"],"transcripts_by_uniquename":{"SJAG_01548.1":null},"uniprot_identifier":"B6JY89","uniquename":"SJAG_01548"}


id: SJAG_01551
data:
  {"coiled_coil_coords":[[20,40]],"cv_annotations":{"biological_process":[{"annotations":[93014],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[101067],"is_not":false,"summary":null,"term":"GO:0000447"},{"annotations":[74706],"is_not":false,"summary":null,"term":"GO:0000463"},{"annotations":[101071],"is_not":false,"summary":null,"term":"GO:0008033"}],"cellular_component":[{"annotations":[74705],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[101061],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[101065],"is_not":false,"summary":null,"term":"GO:0000172"}],"molecular_function":[{"annotations":[101073],"is_not":false,"summary":null,"term":"GO:0000171"},{"annotations":[74703],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[74704],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR005998","InterPro:IPR036919","EnsemblGenomes-Tr:EEB06509","InterPro:IPR039699","InterPro:IPR018038","InterPro:IPR023106","UniProtKB/TrEMBL:B6JY91","InterPro:IPR035808","InterPro:IPR016082","GOA:B6JY91","EnsemblGenomes-Gn:SJAG_01551","InterPro:IPR012988"],"deletion_viability":"unknown","disordered_region_coords":[[25,26],[30,39]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"},{"uniquename":"SJAG_06627"},{"uniquename":"SJAG_01555"},{"name":"fes1","uniquename":"SJAG_01556"}],"genes_by_uniquename":{"HGNC:10363":null,"SJAG_01551":null,"SPAC3H5.07":null,"SPBC18H10.12c":null,"YGL076C":null,"YPL198W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1390.20","interpro_id":"IPR036919","interpro_name":"Ribosomal protein L30, ferredoxin-like fold domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":194,"score":3.900000125515584e-24,"start":90},{"end":249,"score":2.699999868127634e-7,"start":195}],"model":"1vq8W01","name":"Ribosomal protein L30, ferredoxin-like fold domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00327","interpro_id":"IPR016082","interpro_name":"Ribosomal protein L30, ferredoxin-like fold domain","interpro_type":"Domain","locations":[{"end":141,"score":3.399999969650959e-18,"start":91}],"model":"PF00327","name":"Ribosomal protein L30p/L7e"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08079","interpro_id":"IPR012988","interpro_name":"Ribosomal protein L30, N-terminal","interpro_type":"Domain","locations":[{"end":86,"score":1.9999999996399175e-23,"start":16}],"model":"PF08079","name":"Ribosomal L30 N-terminal domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00634","interpro_id":"IPR018038","interpro_name":"Ribosomal protein L30, conserved site","interpro_type":"Conserved_site","locations":[{"end":141,"score":0.0,"start":109}],"model":"PS00634","name":"Ribosomal protein L30 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11524","interpro_id":"IPR039699","interpro_name":"Ribosomal protein L7/L30","interpro_type":"Family","locations":[{"end":249,"score":0.0,"start":15}],"model":"PTHR11524:SF16","name":"60S RIBOSOMAL PROTEIN L7"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55129","interpro_id":"IPR036919","interpro_name":"Ribosomal protein L30, ferredoxin-like fold domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":249,"score":0.0,"start":90}],"model":"0037548","name":"Ribosomal protein L30p/L7e"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01310","interpro_id":"IPR005998","interpro_name":"Ribosomal protein L7, eukaryotic","interpro_type":"Family","locations":[{"end":250,"score":0.0,"start":16}],"model":"TIGR01310","name":"60S ribosomal protein uL30 (Provisional)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01657","interpro_id":"IPR035808","interpro_name":"Ribosomal protein L7, eukaryotic/archaeal","interpro_type":"Domain","locations":[{"end":250,"score":0.0,"start":90}],"model":"cd01657","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":1873442,"start_pos":1872418,"strand":"forward"},"low_complexity_region_coords":[[31,49]],"name":"rpl702","ortholog_annotations":[{"gene_uniquename":"SJAG_01551","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10363","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01551","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H5.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01551","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.12c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01551","ortholog_taxonid":4932,"ortholog_uniquename":"YGL076C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01551","ortholog_taxonid":4932,"ortholog_uniquename":"YPL198W","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L7b involved in cytoplasmic translation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005198","GO:0006399","GO:0005730","GO:0002181","GO:0042254","GO:0022626","GO:0140098","GO:0016788","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000171":null,"GO:0000172":null,"GO:0000447":null,"GO:0000463":null,"GO:0002181":null,"GO:0003723":null,"GO:0003735":null,"GO:0005730":null,"GO:0008033":null,"GO:0022625":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01551.1"],"transcripts_by_uniquename":{"SJAG_01551.1":null},"uniprot_identifier":"B6JY91","uniquename":"SJAG_01551"}


id: SJAG_01552
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01552","UniProtKB/TrEMBL:B6JY92","EnsemblGenomes-Tr:EEB06510"],"deletion_viability":"unknown","disordered_region_coords":[[223,224]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"},{"uniquename":"SJAG_06627"},{"uniquename":"SJAG_01555"},{"name":"fes1","uniquename":"SJAG_01556"},{"name":"cwf28","uniquename":"SJAG_01557"}],"genes_by_uniquename":{"SJAG_01552":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1875316,"start_pos":1874639,"strand":"reverse"},"product":"Schizosaccharomyces japonicus specific protein/dubious","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01552.1"],"transcripts_by_uniquename":{"SJAG_01552.1":null},"uniprot_identifier":"B6JY92","uniquename":"SJAG_01552"}


id: SJAG_01553
data:
  {"coiled_coil_coords":[[287,307]],"cv_annotations":{"biological_process":[{"annotations":[57463],"is_not":false,"summary":null,"term":"GO:0006355"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06511","InterPro:IPR039327","GOA:B6JY93","EnsemblGenomes-Gn:SJAG_01553","InterPro:IPR013087","UniProtKB/TrEMBL:B6JY93"],"deletion_viability":"unknown","disordered_region_coords":[[1,43],[48,50],[96,98],[101,104],[117,118],[122,138],[144,145],[214,220],[308,315],[331,334],[337,338],[341,352],[358,358],[259,286],[158,163]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"},{"uniquename":"SJAG_06627"},{"uniquename":"SJAG_01555"},{"name":"fes1","uniquename":"SJAG_01556"},{"name":"cwf28","uniquename":"SJAG_01557"},{"name":"srp101","uniquename":"SJAG_01558"}],"genes_by_uniquename":{"SJAG_01553":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.160.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":270,"score":6.8999997893115506e-6,"start":241}],"model":"1ubdC01","name":"Classic Zinc Finger"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00028","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":270,"score":0.0,"start":246}],"model":"PS00028","name":"Zinc finger C2H2 type domain signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR36167","interpro_id":"IPR039327","interpro_name":"C2H2 finger domain transcription factor CON7-like","interpro_type":"Family","locations":[{"end":170,"score":0.0,"start":78}],"model":"PTHR36167:SF3","name":"C2H2 FINGER DOMAIN TRANSCRIPTION FACTOR (EUROFUNG)-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1877147,"start_pos":1876071,"strand":"reverse"},"low_complexity_region_coords":[[44,69],[79,93],[164,213],[221,235],[308,316],[331,357]],"product":"zinc finger C2H2-type","references_by_uniquename":{"GO_REF:0000002":null},"subset_termids":["GO:0006355","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006355":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01553.1"],"transcripts_by_uniquename":{"SJAG_01553.1":null},"uniprot_identifier":"B6JY93","uniquename":"SJAG_01553"}


id: SJAG_01555
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01555","UniProtKB/TrEMBL:B6JY94","EnsemblGenomes-Tr:EEB06512"],"deletion_viability":"unknown","disordered_region_coords":[[2,3],[42,49],[75,79],[90,98],[6,35]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"},{"uniquename":"SJAG_06627"},{"uniquename":"SJAG_01555"},{"name":"fes1","uniquename":"SJAG_01556"},{"name":"cwf28","uniquename":"SJAG_01557"},{"name":"srp101","uniquename":"SJAG_01558"},{"name":"oms1","uniquename":"SJAG_05693"},{"name":"dcp1","uniquename":"SJAG_05694"}],"genes_by_uniquename":{"SJAG_01555":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":1879340,"start_pos":1879041,"strand":"forward"},"low_complexity_region_coords":[[36,41]],"product":"Schizosaccharomyces japonicus specific disordered protein","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01555.1"],"transcripts_by_uniquename":{"SJAG_01555.1":null},"uniprot_identifier":"B6JY94","uniquename":"SJAG_01555"}


id: SJAG_01556
data:
  {"coiled_coil_coords":[[66,86]],"cv_annotations":{"biological_process":[{"annotations":[105080],"is_not":false,"summary":null,"term":"GO:0071629"}],"cellular_component":[{"annotations":[105077],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[70247],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[105079],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[70246],"is_not":false,"summary":null,"term":"GO:0000774"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01556","EnsemblGenomes-Tr:EEB06513","InterPro:IPR016024","InterPro:IPR013918","InterPro:IPR011989","UniProtKB/TrEMBL:B6JY95"],"deletion_viability":"unknown","disordered_region_coords":[[17,32],[38,41],[51,52],[54,61]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"},{"uniquename":"SJAG_06627"},{"uniquename":"SJAG_01555"},{"name":"fes1","uniquename":"SJAG_01556"},{"name":"cwf28","uniquename":"SJAG_01557"},{"name":"srp101","uniquename":"SJAG_01558"},{"name":"oms1","uniquename":"SJAG_05693"},{"name":"dcp1","uniquename":"SJAG_05694"},{"name":"hot15","uniquename":"SJAG_01560"}],"genes_by_uniquename":{"HGNC:24989":null,"SJAG_01556":null,"SPBC3B9.01":null,"YBR101C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":295,"score":2.000000036005019e-35,"start":46}],"model":"1xqrA00","name":"Leucine-rich Repeat Variant"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08609","interpro_id":"IPR013918","interpro_name":"Nucleotide exchange factor Fes1","interpro_type":"Domain","locations":[{"end":89,"score":5.699999920087674e-22,"start":1}],"model":"PF08609","name":"Nucleotide exchange factor Fes1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR19316","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":275,"score":7.500000213491535e-39,"start":36}],"model":"PTHR19316:SF18","name":"PROTEIN FOLDING REGULATOR"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":255,"score":9.979999849897338e-23,"start":48}],"model":"0051071","name":"ARM repeat"}],"location":{"chromosome_name":"supercont5.3","end_pos":1881231,"start_pos":1880142,"strand":"forward"},"low_complexity_region_coords":[[3,17],[13,33]],"name":"fes1","ortholog_annotations":[{"gene_uniquename":"SJAG_01556","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24989","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01556","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC3B9.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01556","ortholog_taxonid":4932,"ortholog_uniquename":"YBR101C","reference_uniquename":"PMID:29761456"}],"product":"Hsp70 nucleotide exchange factor Fes1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0098772","GO:0030163","GO:0005634","GO:0005783","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000774":null,"GO:0005634":null,"GO:0005783":null,"GO:0005829":null,"GO:0071629":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01556.1"],"transcripts_by_uniquename":{"SJAG_01556.1":null},"uniprot_identifier":"B6JY95","uniquename":"SJAG_01556"}


id: SJAG_01557
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74094],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[105082],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[74093],"is_not":false,"summary":null,"term":"GO:0005681"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01557","UniProtKB/TrEMBL:B6JY96","EnsemblGenomes-Tr:EEB06514","InterPro:IPR026822"],"deletion_viability":"unknown","disordered_region_coords":[[386,387],[174,226],[1,14],[24,119],[134,143],[281,317],[329,330],[354,353]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"},{"uniquename":"SJAG_06627"},{"uniquename":"SJAG_01555"},{"name":"fes1","uniquename":"SJAG_01556"},{"name":"cwf28","uniquename":"SJAG_01557"},{"name":"srp101","uniquename":"SJAG_01558"},{"name":"oms1","uniquename":"SJAG_05693"},{"name":"dcp1","uniquename":"SJAG_05694"},{"name":"hot15","uniquename":"SJAG_01560"},{"name":"atg3","uniquename":"SJAG_01561"}],"genes_by_uniquename":{"HGNC:30677":null,"SJAG_01557":null,"SPBC3B9.02c":null,"YOR148C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12656","interpro_id":"IPR026822","interpro_name":"Spp2/MOS2, G-patch domain","interpro_type":"Domain","locations":[{"end":279,"score":2.4999999594378976e-18,"start":227}],"model":"PF12656","name":"G-patch domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15818","interpro_id":"IPR045166","interpro_name":"Pre-mRNA-splicing factor Spp2-like","interpro_type":"Family","locations":[{"end":297,"score":4.000000094968912e-32,"start":5}],"model":"PTHR15818:SF2","name":"G PATCH AND KOW-CONTAINING"}],"location":{"chromosome_name":"supercont5.3","end_pos":1882578,"start_pos":1881415,"strand":"reverse"},"low_complexity_region_coords":[[15,23],[120,133],[144,173],[318,328],[331,353],[354,385]],"name":"cwf28","ortholog_annotations":[{"gene_uniquename":"SJAG_01557","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30677","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01557","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC3B9.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01557","ortholog_taxonid":4932,"ortholog_uniquename":"YOR148C","reference_uniquename":"PMID:29761456"}],"product":"splicing factor Cwf28","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21873635":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0015630","GO:0072686","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005681":null,"GO:0045292":null,"GO:0072686":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01557.1"],"transcripts_by_uniquename":{"SJAG_01557.1":null},"uniprot_identifier":"B6JY96","uniquename":"SJAG_01557"}


